FvH4_6g20280

Testis-expressed sequence 10 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0001389
Physical Location & Seq
Reverse (-)
13864142 .. 13875243
11102 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g20280.t1

Sequence Viewer

Length: 2526 bp
ATGCTACAAATACTGAAATTAAATCAAAAGAGTGTGGCATCAGAGAAGGCAGGATTAGCAGTAAACAAGAAAGGCTTGACATTGAAAGAACTTCTTCAACAGACATCTCATTACAATTCAAAAGTCCGTAAAGATGCATTGTTGGGTATCAAGGATTTATTCCTTAAGCATCCAGAAGAGCTGAGGTTGCATAAGTACACCGTTATTGAAAAACTGCGTGAACGCATTGGTGATGATGATAGACTTGTTCGAGAAACGCTGTATCAACTTTTCAAGTTGGTGATTTTCCCTGGTTTTAAGGAGGATAATCAAGAGCTTTTTGTTTCCTTGATGATGGCCTATATATTTAACTCAATGACAAATTTAGCAATTGATGTTCGACTGATGGCTTTCAAATTTTTGGAGCTTGTTATCCAGTATTATCCACCTTCCTTTTTCTTGTATGCTGAAAAGATTCTTCAAAACTTTGAGGATATTTTGCGAAAGAACCAGTTCTTTTTAGAGGACAAGAGCAAGCTGAAGACTGCTCTTTCTGGGTTGGAGCGATGCTTGTTACTGCTTCCATGTAACAAGAAAGAAGTTGGCTCATGTAAACAGAGTGATGCTGTAGAAGGGATGCTGCATGGTTTTGAGCCTCATGTGCCTGCAGAATCTGCTGGGTTTTCTATCATCATCCCAAAACTAAAAGACTTGGTGCCAGTTCTAGTCAATTGTTTCCAAGATTTTATTCCTGCAGTACAGACTGGTTCTCATCTTGATGTGCAATCATATGATTGTATGTTGTCGATACTTCACAGTATAAAGCATGCAGTCCAATTCTTTGTTTATATGACTGATGAGGGTATGTCGGAATCACGACCTTCTCATGGGGAGCTTGATGTGGCTATGTTGGGTGGGACTATCTCCATAATGTTGATGAAGAAGTTACTTGTTCTGTTTCCCCTGAACATGAGAAATCAACTTTCTGAGAAGGATGATGTTAAATATTTTGTCCTGGACAGTGTGATGACAGAAATATTTCTGCACTTAGGCAAATGGATCTGCCCTCCTGGTATTCTGTTGGAGAAATTTTTAGAATTTCTAGAGAATGCTCTGCTTGGAAAGATCTGTAGTGACAGACGCTCTGGTAAAGCAATCCAGGAGAAGCATTTAATTTCGCTTCTTCCTTTTGTTCCGAAACTTGTCTCGCAAGTGCCAAATGACTGGAAGTCTCGTCTTCTTCAGGCTTTTACTAACGCATTCAAGGACTGCAATCCTGTGTCGTCTTTAAAATTGGCTTGTCTTTCCACAATGGAGGAGATGGTTGTTCCTAGACAAGGCTTGCTGTACCTGGATCCCAGGGATCCCGAGATATTAAACTTTCAGATTGCCTGGATAAGAGAGCTTCCCATGTTGCTAATCCTGCTGGGTGATAAAAACACGTCCCATTCCCAGGTTGTGTTACACCTTTTACTTCGCCTGGGACAGCGTGCTTTCATGAACTATTCATTTGCTTTGGAATATGACAACATGCAATTCTCACTGCAAGGATTTTTCTGCATATATCAAGATGATGGAAATATAATATATGGTCCCTTTGTAAAGCTGCCCAGAGAATCTCAGGAGCTCTCTCTTTGTTGCCTTCGTTATATCTCTAATTTGGATTTGCATACGTTGAGGTCAATAGCTTATTGTTGCCTATGTCCAGAACTGGAACAGTTTGTAGTGATTCGAGTCATAGAGATCCTGCATTCAGCTTATAAATCTGGGCATATTCAAATTGCGGATCACATTAGTTTCTTCATCACTTTGCTGTCTCGATTCAGAGTTCTCCCAGAAAATGTTAATGTTGTTAAAGAGAAAGATGTGAATATCTCAAATCAGGGGACTTTTAAATCAATCACCAGCATTGTTTGCTCATGCCTGTCACAGATGGGTGATAGTTCTCTTGTTTTTAAACTACTAGAAAAGATGGTACTAGATCAACTGTCGCAAACCCTTCCTCTGGACAATGTCTGTGCTATGCTTAGGATGCTTATTGCACTGGACTCTGAAGAGACAATAATTTCTGAACAAGCTTTTGTAAGCTTAGTCGAAATCCTTCCGCGATATCTTATTGACATTGTGCATTGCATTGCTGATGATGATGAGAAGGCCTCTGGTTCCAGTTTTTTTAGTGCATATTTTTATTATCTTGTTCCTTGCTTTTTCTTATTTGTTAAAAGTCACAAACTTCTGGGTATCGTGTTGAAGATGTTGGGGTCATGGATAAACGAAAGTTTGTCAATTTTACCTTGTGATCATACCCACTATGAAACAGACATTTCAAGCAGGGTAGAAGTGATCGTGTCGGTTCTTCTGTTGTTGCATAACGATGAAAAAATTGGGCGAATCATGTCTTCGTTCAAGGCAGAGATTGACTATATTTTGCAAAGCATCATCTCTATACAGTCCTCGGAGGAAATCAGCATGACCATCCAAGAAAAGCACCAAGTGAAATGCGCACATGATAGACTAAAGAACGTCACTAGTGCACAATCAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ipi1_N

Protein Analysis

842

Amino Acids

96.02

Weight (kDa)

6.14

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ipi1_N PF12333 105 - 172 5.6e-07 Rix1 complex component involved in 60S ribosome maturation
TPR_TEX10 PF25781 457 - 814 5.7e-19 TEX10-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1740
Acc16I TGCGCA 1 cut(s) 2482
AccB1I GGYRCC 1 cut(s) 694
AccII CGCG 1 cut(s) 2086
AciI CCGC 2 cut(s) 1763, 2084
AclWI GGATC 7 cut(s) 1046, 1328, 1337, 1341, 1350, 1717, 1773
AcsI RAATTY 4 cut(s) 361, 395, 1067, 1076
AcuI CTGAAG 3 cut(s) 539, 1205, 2052
AdeI CACNNNGTG 1 cut(s) 2473
AfaI GTAC 4 cut(s) 197, 738, 1328, 1956
AfiI CCNNNNNNNGG 4 cut(s) 866, 1316, 1432, 1984
AflII CTTAAG 1 cut(s) 164
AflIII ACRYGT 1 cut(s) 1419
AhdI GACNNNNNGTC 1 cut(s) 1207
AhlI ACTAGT 1 cut(s) 2507
AjiI CACGTC 1 cut(s) 1422
AjnI CCWGG 9 cut(s) 289, 993, 1048, 1137, 1329, 1337, 1370, 1431, 1458
AjuI GAANNNNNNNTTGG 2 cut(s) 711, 743
Alw21I GWGCWC 2 cut(s) 1608, 2515
Alw26I GTCTC 4 cut(s) 1189, 1215, 1800, 2030
Alw44I GTGCAC 1 cut(s) 2511
AlwI GGATC 7 cut(s) 1046, 1328, 1337, 1341, 1350, 1717, 1773
AlwNI CAGNNNCTG 1 cut(s) 653
Ama87I CYCGRG 1 cut(s) 1346
AoxI GGCC 2 cut(s) 336, 2133
ApaLI GTGCAC 1 cut(s) 2511
ApeKI GCWGC 2 cut(s) 619, 1585
ApoI RAATTY 4 cut(s) 361, 395, 1067, 1076
Asp700I GAANNNNTTC 5 cut(s) 93, 453, 491, 1017, 2079
AspLEI GCGC 1 cut(s) 2483
AspS9I GGNCC 1 cut(s) 1571
AsuHPI GGTGA 5 cut(s) 242, 292, 1421, 1873, 1928
AvaI CYCGRG 1 cut(s) 1346
AvaII GGWCC 1 cut(s) 1571
BaeGI GKGCMC 1 cut(s) 2515
BamHI GGATCC 2 cut(s) 1333, 1342
BanI GGYRCC 1 cut(s) 694
BanII GRGCYC 1 cut(s) 1608
BbsI GAAGAC 3 cut(s) 527, 1208, 2370
Bbv12I GWGCWC 2 cut(s) 1608, 2515
BbvCI CCTCAGC 1 cut(s) 182
BbvI GCAGC 2 cut(s) 606, 1572
BccI CCATC 7 cut(s) 328, 379, 1294, 1547, 1906, 1945, 2462
BciT130I CCWGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
BclI TGATCA 1 cut(s) 2278
BcoDI GTCTC 4 cut(s) 1189, 1215, 1800, 2030
BcuI ACTAGT 1 cut(s) 2507
BfaI CTAG 7 cut(s) 704, 1082, 1311, 1943, 1958, 2508, 2524
BfmI CTRYAG 4 cut(s) 606, 645, 732, 1108
BfrI CTTAAG 1 cut(s) 164
BglII AGATCT 1 cut(s) 1104
BisI GCNGC 2 cut(s) 620, 1586
BlsI GCNGC 2 cut(s) 621, 1587
Bme1390I CCNGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
Bme18I GGWCC 1 cut(s) 1571
BmeRI GACNNNNNGTC 1 cut(s) 1207
BmeT110I CYCGRG 1 cut(s) 1346
BmgBI CACGTC 1 cut(s) 1422
BmgT120I GGNCC 1 cut(s) 1571
BmiI GGNNCC 5 cut(s) 696, 1335, 1344, 1573, 2143
BmrFI CCNGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
BmsI GCATC 8 cut(s) 47, 124, 178, 536, 592, 606, 2001, 2424
BpiI GAAGAC 3 cut(s) 527, 1208, 2370
BplI GAGNNNNNCTC 2 cut(s) 2120, 2152
Bpu10I CCTNAGC 2 cut(s) 182, 2006
BsaJI CCNNGG 6 cut(s) 289, 1337, 1338, 1431, 1459, 2433
Bsc4I CCNNNNNNNGG 4 cut(s) 866, 1316, 1432, 1984
Bse1I ACTGG 8 cut(s) 415, 490, 698, 748, 1208, 1695, 2028, 2145
Bse3DI GCAATG 2 cut(s) 2107, 2112
BseBI CCWGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
BseDI CCNNGG 6 cut(s) 289, 1337, 1338, 1431, 1459, 2433
BseGI GGATG 6 cut(s) 169, 621, 672, 979, 2016, 2454
BseLI CCNNNNNNNGG 4 cut(s) 866, 1316, 1432, 1984
BseMI GCAATG 2 cut(s) 2107, 2112
BseMII CTCAG 3 cut(s) 173, 957, 1613
BseNI ACTGG 8 cut(s) 415, 490, 698, 748, 1208, 1695, 2028, 2145
BseRI GAGGAG 1 cut(s) 1310
BseSI GKGCMC 1 cut(s) 2515
BseXI GCAGC 2 cut(s) 606, 1572
BseYI CCCAGC 2 cut(s) 656, 1405
BsgI GTGCAG 1 cut(s) 1007
Bsh1236I CGCG 1 cut(s) 2086
BshFI GGCC 2 cut(s) 338, 2135
BshNI GGYRCC 1 cut(s) 694
BsiHKAI GWGCWC 2 cut(s) 1608, 2515
BsiHKCI CYCGRG 1 cut(s) 1346
BslFI GGGAC 5 cut(s) 910, 1408, 1476, 1557, 1879
BslI CCNNNNNNNGG 4 cut(s) 866, 1316, 1432, 1984
BsmAI GTCTC 4 cut(s) 1189, 1215, 1800, 2030
BsmFI GGGAC 5 cut(s) 910, 1408, 1476, 1557, 1879
BsmI GAATGC 3 cut(s) 1093, 1238, 1729
BsnI GGCC 2 cut(s) 338, 2135
BsoBI CYCGRG 1 cut(s) 1346
Bsp1286I GDGCHC 2 cut(s) 1608, 2515
Bsp143I GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
BspACI CCGC 2 cut(s) 1763, 2084
BspANI GGCC 2 cut(s) 338, 2135
BspCNI CTCAG 3 cut(s) 174, 958, 1612
BspFNI CGCG 1 cut(s) 2086
BspHI TCATGA 1 cut(s) 1476
BspLI GGNNCC 5 cut(s) 696, 1335, 1344, 1573, 2143
BspMAI CTGCAG 2 cut(s) 649, 736
BspPI GGATC 7 cut(s) 1046, 1328, 1337, 1341, 1350, 1717, 1773
BspQI GCTCTTC 1 cut(s) 171
BspT107I GGYRCC 1 cut(s) 694
BspTI CTTAAG 1 cut(s) 164
BsrDI GCAATG 2 cut(s) 2107, 2112
BsrI ACTGG 8 cut(s) 415, 490, 698, 748, 1208, 1695, 2028, 2145
BssECI CCNNGG 6 cut(s) 289, 1337, 1338, 1431, 1459, 2433
BssMI GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
Bst2UI CCWGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
Bst4CI ACNGT 6 cut(s) 202, 797, 1001, 1698, 1968, 2430
Bst6I CTCTTC 2 cut(s) 171, 2028
BstAFI CTTAAG 1 cut(s) 164
BstAPI GCANNNNNTGC 2 cut(s) 653, 1893
BstC8I GCNNGC 5 cut(s) 515, 645, 807, 1322, 1470
BstDEI CTNAG 6 cut(s) 182, 966, 1027, 1599, 2006, 2068
BstENI CCTNNNNNAGG 1 cut(s) 1314
BstF5I GGATG 6 cut(s) 169, 621, 672, 979, 2016, 2454
BstFNI CGCG 1 cut(s) 2086
BstHHI GCGC 1 cut(s) 2483
BstKTI GATC 9 cut(s) 1041, 1107, 1336, 1345, 1725, 1768, 1963, 2281, 2325
BstMAI GTCTC 4 cut(s) 1189, 1215, 1800, 2030
BstMBI GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
BstMWI GCNNNNNNNGC 7 cut(s) 56, 187, 640, 653, 1402, 1893, 2011
BstNI CCWGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
BstNSI RCATGY 2 cut(s) 809, 1513
BstSCI CCNGG 9 cut(s) 289, 993, 1048, 1137, 1329, 1337, 1370, 1431, 1458
BstSFI CTRYAG 4 cut(s) 606, 645, 732, 1108
BstSLI GKGCMC 1 cut(s) 2515
BstUI CGCG 1 cut(s) 2086
BstV1I GCAGC 2 cut(s) 606, 1572
BstV2I GAAGAC 3 cut(s) 527, 1208, 2370
BstX2I RGATCY 5 cut(s) 1038, 1104, 1333, 1342, 1722
BstXI CCANNNNNNTGG 1 cut(s) 1203
BstYI RGATCY 5 cut(s) 1038, 1104, 1333, 1342, 1722
BsuRI GGCC 2 cut(s) 338, 2135
BtgZI GCGATG 1 cut(s) 559
BtrI CACGTC 1 cut(s) 1422
BtsCI GGATG 6 cut(s) 169, 621, 672, 979, 2016, 2454
BtsI GCAGTG 1 cut(s) 1520
BtsIMutI CAGTG 3 cut(s) 1006, 1520, 2021
Cac8I GCNNGC 5 cut(s) 515, 645, 807, 1322, 1470
CaiI CAGNNNCTG 1 cut(s) 653
CciI TCATGA 1 cut(s) 1476
CfoI GCGC 1 cut(s) 2483
Cfr13I GGNCC 1 cut(s) 1571
CseI GACGC 1 cut(s) 1128
Csp6I GTAC 4 cut(s) 196, 737, 1327, 1955
CviQI GTAC 4 cut(s) 196, 737, 1327, 1955
DdeI CTNAG 6 cut(s) 182, 966, 1027, 1599, 2006, 2068
DpnI GATC 9 cut(s) 1040, 1106, 1335, 1344, 1724, 1767, 1962, 2280, 2324
DpnII GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
DraI TTTAAA 3 cut(s) 1269, 1873, 1936
DraIII CACNNNGTG 1 cut(s) 2473
DriI GACNNNNNGTC 1 cut(s) 1207
Eam1104I CTCTTC 2 cut(s) 171, 2028
Eam1105I GACNNNNNGTC 1 cut(s) 1207
EarI CTCTTC 2 cut(s) 171, 2028
Ecl136II GAGCTC 1 cut(s) 1606
Eco147I AGGCCT 1 cut(s) 2135
Eco24I GRGCYC 1 cut(s) 1608
Eco32I GATATC 1 cut(s) 2090
Eco47I GGWCC 1 cut(s) 1571
Eco53kI GAGCTC 1 cut(s) 1606
Eco57I CTGAAG 3 cut(s) 539, 1205, 2052
Eco88I CYCGRG 1 cut(s) 1346
EcoICRI GAGCTC 1 cut(s) 1606
EcoNI CCTNNNNNAGG 1 cut(s) 1314
EcoRII CCWGG 9 cut(s) 289, 993, 1048, 1137, 1329, 1337, 1370, 1431, 1458
EcoRV GATATC 1 cut(s) 2090
EcoT22I ATGCAT 1 cut(s) 139
EcoT38I GRGCYC 1 cut(s) 1608
FalI AAGNNNNNCTT 4 cut(s) 59, 91, 78, 110
FaqI GGGAC 5 cut(s) 910, 1408, 1476, 1557, 1879
FauNDI CATATG 1 cut(s) 769
FbaI TGATCA 1 cut(s) 2278
Fnu4HI GCNGC 2 cut(s) 620, 1586
FokI GGATG 6 cut(s) 156, 628, 659, 986, 2023, 2441
FriOI GRGCYC 1 cut(s) 1608
Fsp4HI GCNGC 2 cut(s) 620, 1586
FspAI RTGCGCAY 1 cut(s) 2482
FspBI CTAG 7 cut(s) 704, 1082, 1311, 1943, 1958, 2508, 2524
FspI TGCGCA 1 cut(s) 2482
GlaI GCGC 1 cut(s) 2482
GluI GCNGC 2 cut(s) 620, 1586
GsaI CCCAGC 2 cut(s) 660, 1409
HaeIII GGCC 2 cut(s) 338, 2135
HgaI GACGC 1 cut(s) 1128
HhaI GCGC 1 cut(s) 2483
Hin6I GCGC 1 cut(s) 2481
HinP1I GCGC 1 cut(s) 2481
HindIII AAGCTT 2 cut(s) 2055, 2065
HinfI GANTC 9 cut(s) 454, 650, 851, 1595, 1708, 1713, 1800, 2027, 2370
HphI GGTGA 5 cut(s) 242, 292, 1421, 1873, 1928
Hpy166II GTNNAC 5 cut(s) 64, 198, 221, 593, 2513
Hpy188I TCNGA 9 cut(s) 43, 850, 967, 1176, 1365, 1805, 2032, 2050, 2437
Hpy8I GTNNAC 5 cut(s) 64, 198, 221, 593, 2513
HpyAV CCTTC 9 cut(s) 40, 438, 605, 870, 964, 1631, 1988, 2090, 2125
HpyCH4III ACNGT 6 cut(s) 202, 797, 1001, 1698, 1968, 2430
HpyCH4IV ACGT 3 cut(s) 1421, 1652, 2502
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 187, 640, 653, 1402, 1893, 2011
HpyF3I CTNAG 6 cut(s) 182, 966, 1027, 1599, 2006, 2068
HpySE526I ACGT 3 cut(s) 1421, 1652, 2502
HspAI GCGC 1 cut(s) 2481
Ksp22I TGATCA 1 cut(s) 2278
Kzo9I GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
LguI GCTCTTC 1 cut(s) 171
LmnI GCTCC 4 cut(s) 403, 541, 871, 1603
Lsp1109I GCAGC 2 cut(s) 606, 1572
LweI GCATC 8 cut(s) 47, 124, 178, 536, 592, 606, 2001, 2424
MaeI CTAG 7 cut(s) 704, 1082, 1311, 1943, 1958, 2508, 2524
MaeII ACGT 3 cut(s) 1421, 1652, 2502
MaeIII GTNAC 8 cut(s) 552, 566, 924, 1112, 1440, 1905, 2204, 2503
MalI GATC 9 cut(s) 1040, 1106, 1335, 1344, 1724, 1767, 1962, 2280, 2324
MboI GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
MfeI CAATTG 2 cut(s) 369, 709
MflI RGATCY 5 cut(s) 1038, 1104, 1333, 1342, 1722
MhlI GDGCHC 2 cut(s) 1608, 2515
MlyI GAGTC 2 cut(s) 1722, 2021
MmeI TCCRAC 3 cut(s) 519, 828, 1041
Mph1103I ATGCAT 1 cut(s) 139
MroXI GAANNNNTTC 5 cut(s) 93, 453, 491, 1017, 2079
MslI CAYNNNNRTG 2 cut(s) 756, 2352
MspCI CTTAAG 1 cut(s) 164
MspR9I CCNGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
MunI CAATTG 2 cut(s) 369, 709
Mva1269I GAATGC 3 cut(s) 1093, 1238, 1729
MvaI CCWGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
MvnI CGCG 1 cut(s) 2086
MwoI GCNNNNNNNGC 7 cut(s) 56, 187, 640, 653, 1402, 1893, 2011
NdeI CATATG 1 cut(s) 769
NdeII GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
NlaIV GGNNCC 5 cut(s) 696, 1335, 1344, 1573, 2143
NmuCI GTSAC 4 cut(s) 1112, 1905, 2204, 2503
NsbI TGCGCA 1 cut(s) 2482
NsiI ATGCAT 1 cut(s) 139
NspI RCATGY 2 cut(s) 809, 1513
PaeI GCATGC 1 cut(s) 809
PagI TCATGA 1 cut(s) 1476
PasI CCCWGGG 1 cut(s) 1338
PceI AGGCCT 1 cut(s) 2135
PciSI GCTCTTC 1 cut(s) 171
PctI GAATGC 3 cut(s) 1093, 1238, 1729
PdmI GAANNNNTTC 5 cut(s) 93, 453, 491, 1017, 2079
PfeI GAWTC 7 cut(s) 454, 650, 851, 1595, 1708, 1800, 2370
PflFI GACNNNGTC 1 cut(s) 1991
PfoI TCCNGGA 2 cut(s) 993, 1137
PkrI GCNGC 2 cut(s) 621, 1587
PleI GAGTC 2 cut(s) 1721, 2021
PpsI GAGTC 2 cut(s) 1721, 2021
PsiI TTATAA 1 cut(s) 1740
Psp124BI GAGCTC 1 cut(s) 1608
Psp6I CCWGG 9 cut(s) 289, 993, 1048, 1137, 1329, 1337, 1370, 1431, 1458
PspFI CCCAGC 2 cut(s) 656, 1405
PspGI CCWGG 9 cut(s) 289, 993, 1048, 1137, 1329, 1337, 1370, 1431, 1458
PspN4I GGNNCC 5 cut(s) 696, 1335, 1344, 1573, 2143
PspPI GGNCC 1 cut(s) 1571
PstI CTGCAG 2 cut(s) 649, 736
PstNI CAGNNNCTG 1 cut(s) 653
PsuI RGATCY 5 cut(s) 1038, 1104, 1333, 1342, 1722
PsyI GACNNNGTC 1 cut(s) 1991
RsaI GTAC 4 cut(s) 197, 738, 1328, 1956
RsaNI GTAC 4 cut(s) 196, 737, 1327, 1955
RseI CAYNNNNRTG 2 cut(s) 756, 2352
SacI GAGCTC 1 cut(s) 1608
SapI GCTCTTC 1 cut(s) 171
SatI GCNGC 2 cut(s) 620, 1586
Sau3AI GATC 9 cut(s) 1038, 1104, 1333, 1342, 1722, 1765, 1960, 2278, 2322
Sau96I GGNCC 1 cut(s) 1571
SchI GAGTC 2 cut(s) 1722, 2021
ScrFI CCNGG 9 cut(s) 291, 995, 1050, 1139, 1331, 1339, 1372, 1433, 1460
SduI GDGCHC 2 cut(s) 1608, 2515
SfaNI GCATC 8 cut(s) 47, 124, 178, 536, 592, 606, 2001, 2424
SfcI CTRYAG 4 cut(s) 606, 645, 732, 1108
SinI GGWCC 1 cut(s) 1571
SmiMI CAYNNNNRTG 2 cut(s) 756, 2352
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
SpeI ACTAGT 1 cut(s) 2507
SphI GCATGC 1 cut(s) 809
SseBI AGGCCT 1 cut(s) 2135
SsiI CCGC 2 cut(s) 1763, 2084
SspI AATATT 2 cut(s) 986, 1017
SspMI CTAG 7 cut(s) 704, 1082, 1311, 1943, 1958, 2508, 2524
SstI GAGCTC 1 cut(s) 1608
StuI AGGCCT 1 cut(s) 2135
StyD4I CCNGG 9 cut(s) 289, 993, 1048, 1137, 1329, 1337, 1370, 1431, 1458
TaaI ACNGT 6 cut(s) 202, 797, 1001, 1698, 1968, 2430
TaiI ACGT 3 cut(s) 1424, 1655, 2505
TaqI TCGA 6 cut(s) 250, 379, 785, 1711, 1798, 2073
TatI WGTACW 2 cut(s) 195, 736
TfiI GAWTC 7 cut(s) 454, 650, 851, 1595, 1708, 1800, 2370
TscAI CASTG 3 cut(s) 1006, 1527, 2028
TseFI GTSAC 4 cut(s) 1112, 1905, 2204, 2503
TseI GCWGC 2 cut(s) 619, 1585
Tsp45I GTSAC 4 cut(s) 1112, 1905, 2204, 2503
TspDTI ATGAA 7 cut(s) 932, 1465, 1476, 1493, 1771, 2307, 2370
TspGWI ACGGA 1 cut(s) 116
TspRI CASTG 3 cut(s) 1006, 1527, 2028
Tth111I GACNNNGTC 1 cut(s) 1991
Vha464I CTTAAG 1 cut(s) 164
VneI GTGCAC 1 cut(s) 2511
VpaK11BI GGWCC 1 cut(s) 1571
XagI CCTNNNNNAGG 1 cut(s) 1314
XapI RAATTY 4 cut(s) 361, 395, 1067, 1076
XbaI TCTAGA 1 cut(s) 1081
XceI RCATGY 2 cut(s) 809, 1513
XmnI GAANNNNTTC 5 cut(s) 93, 453, 491, 1017, 2079
XspI CTAG 7 cut(s) 704, 1082, 1311, 1943, 1958, 2508, 2524
Zsp2I ATGCAT 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.