RLG00000029756

Testis-expressed sequence 10 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001389
Physical Location & Seq
Forward (+)
48555957 .. 48628346
72390 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029756

Sequence Viewer

Length: 2661 bp
ATGGCAGGCTCTAAAAATGCGTCAAAGAAGAAGCAAAAGCGCGGTATCGACTTCAAGAAAATAAAGCGAAAGATTGGCAGAAAATTGCCACCGGCACAGAATGCTACAAATACTGAAATTAAATCTAAAGCAATTGTTCTCCCCGAGCAGAGTGTGGCATCAGAGAAGGCAGGATTAGCAGTGAACAAGAAAGGCTTGACTTTGAAAGAGCTTCTTCAACAAACATCTCATTACAGCTCAAAAGTCCGTAAAGACTCATTGTTGGGAATTAAGGATTTATTCCTGAAGCATCCAGAAGAGTTGAGGTCGCATAAGTACACTGTTATTGAAAAACTGCGTGAACGCATTGGTGATGATGATAGACTAGTTCGAGAAACGTTGTATCAACTTTTTAAGTCGGTGATTTTCCCTGGATTTAAGGAGGATAATCAAGAGCTTTTTGTTTCCTTGATGATGGTATATATATTTAATTCAATGACACATTTAGCAATTGATGTTCGACTGATGGCTTTCAAATTTTTGGAGCTTGTTATCCAGTACTATCCACCTTCCTTTCTCTTGTATGCTGAAAAGATTCTTCAAAACTTTGAGGATATTTTGCGAAAGAACCAGTTTTATTTAGAGGACAAGAGCAAGCTGAAGAATGCTCTTTCTGGGTTGGAGCAATGCTTGTTACTGCTTCCATGTAACAAGAAAGAAGTTGGCTCATGTGAACAGAATGATGCTGGACAAGGGATGCTGCATGCTTTTGACCCTGATGTGCCTGCAGAATCTGCTGGGTCTTCTCTCATCATCCCAAAACTAAAAGACCTTGTGCCAGTTCTAGTCAATTGTTTCCAAGATTTTATTCCTGCAGTACAGACTGGTGCACATCTTGATGCGCAATCATTTGATTGTATGGTGTCTATACTTCACAGTATAAATCATGCAGTCCGGTTCTTTGTTTATATGATTGATGAGGGTACGTCAGAATCACGACCTTCTCATGGGGAGCTTGATGTGGCTATGTTGGGTGGAACTATCTCCATGACGCTGATGAAGAAGTTACTTGTTCTGTTTCCCCTGAACATGAGAAATCAACTTTCTGAGAAGGATGATGTTAAATATTTTGTCCTGGACAGTGTGATGACAGAAATATTTCTGCACTTAAGCAAATGGACCTGCCCTCCCGGTGTTCTGTTGGAGAAATTTTTAGAATTTCTAAAGAATGCGCTGCTTGGAAAGATTTGTAGTGATAGACGCTTTGGTAAAGCAATCCAGGAGAAGCATTTAATTTCACTTCTTCCTTTTGTACCGAAACTTGTTTCGCAAGTGGCAAATGACTGGAAGTCTCGTCTTCTTCAGGCTTTTACTAAGGCATTCAAGGATTGCAATCCTGTGTCATCTTTAAAATTAGCTTATCTTTCCACAATGGAGGAGATGGTTGTTCCTAGACAAGGCATGCTGTACCTGGATCCAAGGGATCCCGAGATATTATACTTTCAGATTGCCTGGATAAGAGAGCTTCCCATGTTGCTAATCCTGCTGGGTGATAAGAACACGTCCCACTCCCAGGTTGTGTTACACCTTTTACTTCGCCTGGGACAGCGTGCTGTCATGAACTATTCCTTTGCATTGGAATATGACAACATGCAATTCTCACTGCAAGAATTTTTCTGCATATATCAAGATGATGGAAATATAATATATGGTCCTTTTGTAAGGCTGCCCAGAGAATCTCAGGAACTCTCTCTTTGTTGCCTTCGTTATATCTCTAATTTGGATTTGCATACGTTGAGGTCAATAGCTTATTGCTGCCTATGTCCAGAATTGGAACAGTCTGTAATAATTCGAGTCATAGAGATCCTGCATTCAGCTTATAAATCTGGACATATTCAAATTGCGGATCACATTAGTTTCTTCATCACCTTGCTCTCCCGCTTCAAAGTTTTGCCAGAAAATGTTAATGCTGTTATGGAGAGAGATGTGAATATCTCAAATCGGGGGACTTTTAAATCAATCACTGGAATTGTTTGCTCGTGTCTGTCACAGATGGGCGATAGTTCTCTTGTTTTTAAAATACTAGAAAAAATGGTACTGGATCAAATGTTGCAAAACCTTCCGCTAGACAATATCTGTGCTATGCTTAGGATGCTTATTGCACTGGACTCTGAAGAGACAATAATTTCTGAACAAGCTTTTGTAAGCTTAGTCAAAATCGTTCCGCGATATCTTATTGACATTGTGCATTGCATTGCTGAAGATGATGGGAAGGCCTCTGGTTCCCTTTCCTCGAGTGCATGCTGTTATTATCTTGTTCCTTGCTTTTTCTTATTTGTTAAAAGTCACAGACTTCTGGGTCTTGTGTTGAAGACGTTGGGGTCATGGATAAATGAAAGTTTGTCAATTTTACCTTGCGATCATACCCACTATGAAACAGACATTTCAAGCAGGGTAGAAACAATCGTTTCAGTTCTTCTCTTGTTGCCTAAGGATGACAAAATTTGGCAAGTTATGTCTTCATTTAAGGCAGAGATTGACTGTATTTTGCAAAGCATCATCTCTATACAGTCCTCAGAGGAAATCAGCATGACCCTTCAAGAAAAGCACAAATTGAAATGTGCGCATGATAGACTAGAGAACGCCACAAGTGCATTGCATGCTGAGATGCAGTCAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ipi1_N

Protein Analysis

887

Amino Acids

100.65

Weight (kDa)

7.08

Isoelectric Point (pI)

44.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ipi1_N PF12333 145 - 212 3.6e-08 Rix1 complex component involved in 60S ribosome maturation
TPR_TEX10 PF25781 497 - 854 1.2e-17 TEX10-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1860
AasI GACNNNNNNGTC 2 cut(s) 2337, 2359
Acc16I TGCGCA 2 cut(s) 882, 2604
Acc36I ACCTGC 1 cut(s) 1169
AccII CGCG 2 cut(s) 42, 2206
AciI CCGC 5 cut(s) 42, 1883, 1918, 2102, 2204
AclI AACGTT 1 cut(s) 377
AclWI GGATC 7 cut(s) 1448, 1457, 1461, 1470, 1837, 1893, 2088
AcsI RAATTY 5 cut(s) 515, 1187, 1196, 1649, 2481
AcuI CTGAAG 5 cut(s) 305, 659, 1325, 2172, 2259
AfaI GTAC 7 cut(s) 317, 539, 858, 964, 1293, 1448, 2076
AfiI CCNNNNNNNGG 3 cut(s) 986, 1436, 1552
AflII CTTAAG 1 cut(s) 1147
AflIII ACRYGT 1 cut(s) 1539
AhdI GACNNNNNGTC 1 cut(s) 1327
AhlI ACTAGT 1 cut(s) 364
AjiI CACGTC 1 cut(s) 1542
AjnI CCWGG 7 cut(s) 409, 1113, 1257, 1449, 1490, 1551, 1578
AjuI GAANNNNNNNTTGG 2 cut(s) 831, 863
Alw21I GWGCWC 1 cut(s) 871
Alw26I GTCTC 2 cut(s) 1335, 2150
Alw44I GTGCAC 1 cut(s) 867
AlwI GGATC 7 cut(s) 1448, 1457, 1461, 1470, 1837, 1893, 2088
AlwNI CAGNNNCTG 1 cut(s) 773
Ama87I CYCGRG 3 cut(s) 143, 1466, 2272
AoxI GGCC 1 cut(s) 2253
ApaLI GTGCAC 1 cut(s) 867
ApeKI GCWGC 4 cut(s) 739, 1213, 1705, 1794
ApoI RAATTY 5 cut(s) 515, 1187, 1196, 1649, 2481
Asp700I GAANNNNTTC 2 cut(s) 573, 1137
AspLEI GCGC 4 cut(s) 42, 883, 1213, 2605
AspS9I GGNCC 2 cut(s) 1158, 1691
AsuC2I CCSGG 1 cut(s) 1170
AsuHPI GGTGA 4 cut(s) 362, 412, 1541, 1897
AvaI CYCGRG 3 cut(s) 143, 1466, 2272
AvaII GGWCC 2 cut(s) 1158, 1691
AxyI CCTNAGG 1 cut(s) 2469
BaeGI GKGCMC 1 cut(s) 871
BamHI GGATCC 2 cut(s) 1453, 1462
BauI CACGAG 1 cut(s) 2017
BbsI GAAGAC 4 cut(s) 774, 1328, 2357, 2490
Bbv12I GWGCWC 1 cut(s) 871
BbvI GCAGC 4 cut(s) 726, 1200, 1692, 1781
BccI CCATC 6 cut(s) 448, 499, 1414, 1667, 2026, 2240
BciT130I CCWGG 7 cut(s) 411, 1115, 1259, 1451, 1492, 1553, 1580
BcnI CCSGG 1 cut(s) 1170
BcoDI GTCTC 2 cut(s) 1335, 2150
BcuI ACTAGT 1 cut(s) 364
BfaI CTAG 7 cut(s) 365, 824, 1431, 2063, 2105, 2615, 2659
BfmI CTRYAG 2 cut(s) 765, 852
BfrI CTTAAG 1 cut(s) 1147
BfuAI ACCTGC 1 cut(s) 1169
BisI GCNGC 4 cut(s) 740, 1214, 1706, 1795
BlsI GCNGC 4 cut(s) 741, 1215, 1707, 1796
BmcAI AGTACT 1 cut(s) 539
Bme1390I CCNGG 8 cut(s) 411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
Bme18I GGWCC 2 cut(s) 1158, 1691
BmeRI GACNNNNNGTC 1 cut(s) 1327
BmeT110I CYCGRG 3 cut(s) 143, 1466, 2272
BmgBI CACGTC 1 cut(s) 1542
BmgT120I GGNCC 2 cut(s) 1158, 1691
BmiI GGNNCC 3 cut(s) 1455, 1464, 2263
BmrFI CCNGG 8 cut(s) 411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
BmsI GCATC 8 cut(s) 167, 298, 712, 726, 868, 2121, 2544, 2637
BpiI GAAGAC 4 cut(s) 774, 1328, 2357, 2490
Bpu10I CCTNAGC 1 cut(s) 2126
BpuMI CCSGG 1 cut(s) 1170
BsaBI GATNNNNATC 1 cut(s) 1371
BsaJI CCNNGG 4 cut(s) 409, 1457, 1551, 1579
BsaWI WCCGGW 1 cut(s) 933
BsaXI ACNNNNNCTCC 2 cut(s) 1150, 1180
Bsc4I CCNNNNNNNGG 3 cut(s) 986, 1436, 1552
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 8 cut(s) 535, 610, 818, 868, 1328, 2008, 2082, 2148
Bse21I CCTNAGG 1 cut(s) 2469
Bse3DI GCAATG 4 cut(s) 671, 2227, 2232, 2633
Bse8I GATNNNNATC 1 cut(s) 1371
BseBI CCWGG 7 cut(s) 411, 1115, 1259, 1451, 1492, 1553, 1580
BseDI CCNNGG 4 cut(s) 409, 1457, 1551, 1579
BseGI GGATG 6 cut(s) 289, 741, 792, 1099, 2136, 2479
BseJI GATNNNNATC 1 cut(s) 1371
BseLI CCNNNNNNNGG 3 cut(s) 986, 1436, 1552
BseMI GCAATG 4 cut(s) 671, 2227, 2232, 2633
BseMII CTCAG 4 cut(s) 1077, 1733, 2568, 2634
BseNI ACTGG 8 cut(s) 535, 610, 818, 868, 1328, 2008, 2082, 2148
BseRI GAGGAG 1 cut(s) 1430
BseSI GKGCMC 1 cut(s) 871
BseXI GCAGC 4 cut(s) 726, 1200, 1692, 1781
BseYI CCCAGC 2 cut(s) 776, 1525
BsgI GTGCAG 1 cut(s) 1127
Bsh1236I CGCG 2 cut(s) 42, 2206
BshFI GGCC 1 cut(s) 2255
BsiHKAI GWGCWC 1 cut(s) 871
BsiHKCI CYCGRG 3 cut(s) 143, 1466, 2272
BsiSI CCGG 3 cut(s) 92, 934, 1170
BslFI GGGAC 3 cut(s) 1528, 1596, 1999
BslI CCNNNNNNNGG 3 cut(s) 986, 1436, 1552
BsmAI GTCTC 2 cut(s) 1335, 2150
BsmFI GGGAC 3 cut(s) 1528, 1596, 1999
BsmI GAATGC 5 cut(s) 106, 649, 1213, 1358, 1849
BsnI GGCC 1 cut(s) 2255
BsoBI CYCGRG 3 cut(s) 143, 1466, 2272
Bsp1286I GDGCHC 1 cut(s) 871
Bsp143I GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
BspACI CCGC 5 cut(s) 42, 1883, 1918, 2102, 2204
BspANI GGCC 1 cut(s) 2255
BspCNI CTCAG 4 cut(s) 1078, 1732, 2567, 2635
BspFNI CGCG 2 cut(s) 42, 2206
BspHI TCATGA 1 cut(s) 1596
BspLI GGNNCC 3 cut(s) 1455, 1464, 2263
BspMAI CTGCAG 2 cut(s) 769, 856
BspMI ACCTGC 1 cut(s) 1169
BspPI GGATC 7 cut(s) 1448, 1457, 1461, 1470, 1837, 1893, 2088
BspTI CTTAAG 1 cut(s) 1147
BsrDI GCAATG 4 cut(s) 671, 2227, 2232, 2633
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 8 cut(s) 535, 610, 818, 868, 1328, 2008, 2082, 2148
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 4 cut(s) 409, 1457, 1551, 1579
BssMI GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
BssSI CACGAG 1 cut(s) 2017
BssT1I CCWWGG 1 cut(s) 1457
Bst2BI CACGAG 1 cut(s) 2017
Bst2UI CCWGG 7 cut(s) 411, 1115, 1259, 1451, 1492, 1553, 1580
Bst4CI ACNGT 6 cut(s) 322, 917, 1121, 1818, 2522, 2550
Bst6I CTCTTC 2 cut(s) 291, 2148
BstAFI CTTAAG 1 cut(s) 1147
BstAPI GCANNNNNTGC 3 cut(s) 101, 773, 2639
BstC8I GCNNGC 8 cut(s) 7, 635, 744, 765, 1442, 1590, 2281, 2640
BstDEI CTNAG 8 cut(s) 1086, 1353, 1719, 2126, 2188, 2469, 2554, 2643
BstENI CCTNNNNNAGG 1 cut(s) 1434
BstF5I GGATG 6 cut(s) 289, 741, 792, 1099, 2136, 2479
BstFNI CGCG 2 cut(s) 42, 2206
BstHHI GCGC 4 cut(s) 42, 883, 1213, 2605
BstKTI GATC 6 cut(s) 1456, 1465, 1845, 1888, 2083, 2401
BstMAI GTCTC 2 cut(s) 1335, 2150
BstMBI GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
BstMWI GCNNNNNNNGC 7 cut(s) 101, 176, 773, 1522, 2131, 2630, 2639
BstNI CCWGG 7 cut(s) 411, 1115, 1259, 1451, 1492, 1553, 1580
BstNSI RCATGY 5 cut(s) 746, 1444, 1633, 2283, 2642
BstSCI CCNGG 8 cut(s) 409, 1113, 1168, 1257, 1449, 1490, 1551, 1578
BstSFI CTRYAG 2 cut(s) 765, 852
BstSLI GKGCMC 1 cut(s) 871
BstUI CGCG 2 cut(s) 42, 2206
BstV1I GCAGC 4 cut(s) 726, 1200, 1692, 1781
BstV2I GAAGAC 4 cut(s) 774, 1328, 2357, 2490
BstX2I RGATCY 3 cut(s) 1453, 1462, 1842
BstYI RGATCY 3 cut(s) 1453, 1462, 1842
Bsu36I CCTNAGG 1 cut(s) 2469
BsuRI GGCC 1 cut(s) 2255
BtrI CACGTC 1 cut(s) 1542
BtsCI GGATG 6 cut(s) 289, 741, 792, 1099, 2136, 2479
BtsI GCAGTG 2 cut(s) 186, 1640
BtsIMutI CAGTG 6 cut(s) 186, 318, 1126, 1640, 2001, 2141
BveI ACCTGC 1 cut(s) 1169
Cac8I GCNNGC 8 cut(s) 7, 635, 744, 765, 1442, 1590, 2281, 2640
CaiI CAGNNNCTG 1 cut(s) 773
CciI TCATGA 1 cut(s) 1596
CfoI GCGC 4 cut(s) 42, 883, 1213, 2605
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 2 cut(s) 1158, 1691
CseI GACGC 3 cut(s) 9, 1039, 1248
Csp6I GTAC 7 cut(s) 316, 538, 857, 963, 1292, 1447, 2075
CviQI GTAC 7 cut(s) 316, 538, 857, 963, 1292, 1447, 2075
DdeI CTNAG 8 cut(s) 1086, 1353, 1719, 2126, 2188, 2469, 2554, 2643
DpnI GATC 6 cut(s) 1455, 1464, 1844, 1887, 2082, 2400
DpnII GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
DraI TTTAAA 3 cut(s) 1389, 1993, 2056
DrdI GACNNNNNNGTC 2 cut(s) 2337, 2359
DriI GACNNNNNGTC 1 cut(s) 1327
DseDI GACNNNNNNGTC 2 cut(s) 2337, 2359
Eam1104I CTCTTC 2 cut(s) 291, 2148
Eam1105I GACNNNNNGTC 1 cut(s) 1327
EarI CTCTTC 2 cut(s) 291, 2148
Eco130I CCWWGG 1 cut(s) 1457
Eco147I AGGCCT 1 cut(s) 2255
Eco32I GATATC 1 cut(s) 2210
Eco47I GGWCC 2 cut(s) 1158, 1691
Eco57I CTGAAG 5 cut(s) 305, 659, 1325, 2172, 2259
Eco81I CCTNAGG 1 cut(s) 2469
Eco88I CYCGRG 3 cut(s) 143, 1466, 2272
EcoNI CCTNNNNNAGG 1 cut(s) 1434
EcoRII CCWGG 7 cut(s) 409, 1113, 1257, 1449, 1490, 1551, 1578
EcoRV GATATC 1 cut(s) 2210
EcoT14I CCWWGG 1 cut(s) 1457
ErhI CCWWGG 1 cut(s) 1457
FalI AAGNNNNNCTT 4 cut(s) 179, 211, 198, 230
FaqI GGGAC 3 cut(s) 1528, 1596, 1999
FauI CCCGC 1 cut(s) 1925
Fnu4HI GCNGC 4 cut(s) 740, 1214, 1706, 1795
FokI GGATG 6 cut(s) 276, 748, 779, 1106, 2143, 2486
Fsp4HI GCNGC 4 cut(s) 740, 1214, 1706, 1795
FspAI RTGCGCAY 1 cut(s) 2604
FspBI CTAG 7 cut(s) 365, 824, 1431, 2063, 2105, 2615, 2659
FspI TGCGCA 2 cut(s) 882, 2604
GlaI GCGC 4 cut(s) 41, 882, 1212, 2604
GluI GCNGC 4 cut(s) 740, 1214, 1706, 1795
GsaI CCCAGC 2 cut(s) 780, 1529
HaeIII GGCC 1 cut(s) 2255
HapII CCGG 3 cut(s) 92, 934, 1170
HgaI GACGC 3 cut(s) 9, 1039, 1248
HhaI GCGC 4 cut(s) 42, 883, 1213, 2605
Hin6I GCGC 4 cut(s) 40, 881, 1211, 2603
HinP1I GCGC 4 cut(s) 40, 881, 1211, 2603
HindIII AAGCTT 2 cut(s) 2175, 2185
HinfI GANTC 7 cut(s) 254, 574, 770, 971, 1715, 1833, 2147
HpaII CCGG 3 cut(s) 92, 934, 1170
HphI GGTGA 4 cut(s) 362, 412, 1541, 1897
Hpy166II GTNNAC 5 cut(s) 184, 318, 341, 713, 869
Hpy188I TCNGA 7 cut(s) 163, 970, 1087, 1485, 2152, 2170, 2557
Hpy8I GTNNAC 5 cut(s) 184, 318, 341, 713, 869
HpyAV CCTTC 8 cut(s) 160, 558, 990, 1084, 1751, 2108, 2245, 2585
HpyCH4III ACNGT 6 cut(s) 322, 917, 1121, 1818, 2522, 2550
HpyCH4IV ACGT 5 cut(s) 377, 965, 1541, 1772, 2354
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 176, 773, 1522, 2131, 2630, 2639
HpyF3I CTNAG 8 cut(s) 1086, 1353, 1719, 2126, 2188, 2469, 2554, 2643
HpySE526I ACGT 5 cut(s) 377, 965, 1541, 1772, 2354
HspAI GCGC 4 cut(s) 40, 881, 1211, 2603
Kzo9I GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
LmnI GCTCC 3 cut(s) 523, 661, 991
Lsp1109I GCAGC 4 cut(s) 726, 1200, 1692, 1781
LweI GCATC 8 cut(s) 167, 298, 712, 726, 868, 2121, 2544, 2637
MaeI CTAG 7 cut(s) 365, 824, 1431, 2063, 2105, 2615, 2659
MaeII ACGT 5 cut(s) 377, 965, 1541, 1772, 2354
MaeIII GTNAC 6 cut(s) 672, 686, 1044, 1560, 2025, 2324
MalI GATC 6 cut(s) 1455, 1464, 1844, 1887, 2082, 2400
MboI GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
MfeI CAATTG 3 cut(s) 132, 489, 829
MflI RGATCY 3 cut(s) 1453, 1462, 1842
MhlI GDGCHC 1 cut(s) 871
MlyI GAGTC 3 cut(s) 248, 1842, 2141
MmeI TCCRAC 2 cut(s) 639, 1161
MroXI GAANNNNTTC 2 cut(s) 573, 1137
MslI CAYNNNNRTG 1 cut(s) 876
MspCI CTTAAG 1 cut(s) 1147
MspI CCGG 3 cut(s) 92, 934, 1170
MspR9I CCNGG 8 cut(s) 411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
MunI CAATTG 3 cut(s) 132, 489, 829
Mva1269I GAATGC 5 cut(s) 106, 649, 1213, 1358, 1849
MvaI CCWGG 7 cut(s) 411, 1115, 1259, 1451, 1492, 1553, 1580
MvnI CGCG 2 cut(s) 42, 2206
MwoI GCNNNNNNNGC 7 cut(s) 101, 176, 773, 1522, 2131, 2630, 2639
NciI CCSGG 1 cut(s) 1170
NdeII GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
NlaIV GGNNCC 3 cut(s) 1455, 1464, 2263
NmuCI GTSAC 2 cut(s) 2025, 2324
NsbI TGCGCA 2 cut(s) 882, 2604
NspI RCATGY 5 cut(s) 746, 1444, 1633, 2283, 2642
PaeI GCATGC 4 cut(s) 746, 1444, 2283, 2642
PaeR7I CTCGAG 1 cut(s) 2272
PagI TCATGA 1 cut(s) 1596
PceI AGGCCT 1 cut(s) 2255
PctI GAATGC 5 cut(s) 106, 649, 1213, 1358, 1849
PdmI GAANNNNTTC 2 cut(s) 573, 1137
PfeI GAWTC 4 cut(s) 574, 770, 971, 1715
PfoI TCCNGGA 2 cut(s) 1113, 1257
PkrI GCNGC 4 cut(s) 741, 1215, 1707, 1796
PleI GAGTC 3 cut(s) 248, 1841, 2141
PpsI GAGTC 3 cut(s) 248, 1841, 2141
PsiI TTATAA 1 cut(s) 1860
Psp1406I AACGTT 1 cut(s) 377
Psp6I CCWGG 7 cut(s) 409, 1113, 1257, 1449, 1490, 1551, 1578
PspFI CCCAGC 2 cut(s) 776, 1525
PspGI CCWGG 7 cut(s) 409, 1113, 1257, 1449, 1490, 1551, 1578
PspN4I GGNNCC 3 cut(s) 1455, 1464, 2263
PspPI GGNCC 2 cut(s) 1158, 1691
PspXI VCTCGAGB 1 cut(s) 2272
PstI CTGCAG 2 cut(s) 769, 856
PstNI CAGNNNCTG 1 cut(s) 773
PsuI RGATCY 3 cut(s) 1453, 1462, 1842
RsaI GTAC 7 cut(s) 317, 539, 858, 964, 1293, 1448, 2076
RsaNI GTAC 7 cut(s) 316, 538, 857, 963, 1292, 1447, 2075
RseI CAYNNNNRTG 1 cut(s) 876
SatI GCNGC 4 cut(s) 740, 1214, 1706, 1795
Sau3AI GATC 6 cut(s) 1453, 1462, 1842, 1885, 2080, 2398
Sau96I GGNCC 2 cut(s) 1158, 1691
ScaI AGTACT 1 cut(s) 539
SchI GAGTC 3 cut(s) 248, 1842, 2141
ScrFI CCNGG 8 cut(s) 411, 1115, 1170, 1259, 1451, 1492, 1553, 1580
SduI GDGCHC 1 cut(s) 871
SfaNI GCATC 8 cut(s) 167, 298, 712, 726, 868, 2121, 2544, 2637
SfcI CTRYAG 2 cut(s) 765, 852
Sfr274I CTCGAG 1 cut(s) 2272
SinI GGWCC 2 cut(s) 1158, 1691
SlaI CTCGAG 1 cut(s) 2272
SmiMI CAYNNNNRTG 1 cut(s) 876
SmlI CTYRAG 2 cut(s) 1147, 2272
SmoI CTYRAG 2 cut(s) 1147, 2272
SpeI ACTAGT 1 cut(s) 364
SphI GCATGC 4 cut(s) 746, 1444, 2283, 2642
SseBI AGGCCT 1 cut(s) 2255
SsiI CCGC 5 cut(s) 42, 1883, 1918, 2102, 2204
SspI AATATT 2 cut(s) 1106, 1137
SspMI CTAG 7 cut(s) 365, 824, 1431, 2063, 2105, 2615, 2659
StuI AGGCCT 1 cut(s) 2255
StyD4I CCNGG 8 cut(s) 409, 1113, 1168, 1257, 1449, 1490, 1551, 1578
StyI CCWWGG 1 cut(s) 1457
TaaI ACNGT 6 cut(s) 322, 917, 1121, 1818, 2522, 2550
TaiI ACGT 5 cut(s) 380, 968, 1544, 1775, 2357
TaqI TCGA 5 cut(s) 48, 370, 499, 1831, 2273
TatI WGTACW 3 cut(s) 315, 537, 856
TfiI GAWTC 4 cut(s) 574, 770, 971, 1715
TscAI CASTG 6 cut(s) 186, 325, 1126, 1647, 2008, 2148
TseFI GTSAC 2 cut(s) 2025, 2324
TseI GCWGC 4 cut(s) 739, 1213, 1705, 1794
Tsp45I GTSAC 2 cut(s) 2025, 2324
TspDTI ATGAA 6 cut(s) 1052, 1613, 1891, 2388, 2427, 2490
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 6 cut(s) 186, 325, 1126, 1647, 2008, 2148
Vha464I CTTAAG 1 cut(s) 1147
VneI GTGCAC 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 1158, 1691
XagI CCTNNNNNAGG 1 cut(s) 1434
XapI RAATTY 5 cut(s) 515, 1187, 1196, 1649, 2481
XceI RCATGY 5 cut(s) 746, 1444, 1633, 2283, 2642
XhoI CTCGAG 1 cut(s) 2272
XmnI GAANNNNTTC 2 cut(s) 573, 1137
XspI CTAG 7 cut(s) 365, 824, 1431, 2063, 2105, 2615, 2659
ZrmI AGTACT 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.