Rw3G018380

Testis-expressed sequence 10 protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Reverse (-)
20400981 .. 20411702
10722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G018380.1

Sequence Viewer

Length: 2709 bp
ATGGCAGGCTCTAAAAATGCGTCAAAGAAGAAGCAAAAGCGCGGTATCGACTTCAAGAAAATAAAGCGAAAGATTGGCAGAAAATTGCCACCAGCACAGAATGCTACTAATACTGAGATTAAATCTAAAGGTATTGACTTCATCCGTTTTTGGATTATATATATAAAGCTATTGTTTCAATTGTTGTTCCCCGAGCAGAGTGTGGCATCAGAGAAGGCAGGATTAGCAGTGAACAAGAAAGGCTTGACTTTGAAAGAGCTTCTTCAACAAACATCTCATTACAGCTCAAAAGTCCGTAAAGACGCATTGTTGGGAATTAAGGATTTATTCCTTAAGCATCCAGAAGAGTTGAGGTTGCATAAGTACGCTGTTATTGAAAAACTGCGTGAACGCATTGGTGATGATGATAGACTAGTTCGAGAAACGCTGTATCAACTTTTCAAGTCAGTGATTTTCCCTGGATTTAAGGAGGATAATCAAGAGCTTTTTGTTTCCTTGATGATGGCCTATATATTTAATTCAATGACACATTTAGCAATTGATGTTCGACTGATGGCTTTCAAATTTTTGGAGCTTGTTATCCAGTACTATCCACCTTCCTTTTTCTTGTATGCTGAAAAGATTCTTCAAAACTTTGAGGATATTTTGCGAAAGAACCAGTTTTATTTAGAGGACAAGAGCAAGCTGAAGAATGCTCTTTCTGGGTTGGAGCAATGCTTGTTACTGCTTCCATTTAACAAGAAAGAAGTTGGCTCATGTGAACAGAATGATGCTGGACAAGGGATGCTGCATGCTTTTGACCCTGATGTACCTGCAGAATCTGCTGGGTTTTCTCTCATCATCCCAAAACTAAAAGACCTTGTGCCAGTTCTAGTCAATTGTTTCCAAGATTTTATTCCTGCAGTACAGACTGGTGCACATCTTGATGTGCAATCATTTGATTGTATGGTGTCTATACTTCACAGTATAAATCATGCAGTCCGGTTCTTTGTTTATATGATTGATGAGGGTACGTCAGAATCACGACCTTCTCATGGGGAGCTTGATGTGGCTATGTTGGGTGGAACTATCTCCTTGACGCTGATGAAGAAGTTACTTGTTCTGTTTCCCCTGAACATGAGAAATCAACTTTCTGAGAAGGATGATGTTAAATATTTTGTCCTGGACAGTGTGATGACAGAAATATTTCTGCACTTAAGCAAATGGATCTGCCCTCCCGGTGTTCTGTTGGAGAAATTTTTAGAATTTCTAGAGAATGCGCTGCTTGGAAAGATTTGTAGTGATAGACGCTCTGGTAAAGCAATCCAGGAGAAGCATTTAATTTCACTTCTTCCTTTTGTACCGAAACTTGTTTCGCAAGTGGCAAATGACTGGAAGTCTCGTCTTCTTCAGGCTTTTACTAAGGCATTCAAGGATTGCAATCCTGTGTCATCTTTAAAATTAGCTTGTCTTTCCACAATGGAGGAGATGGTTGTTCCTAGACAAGGCATGCTGTACCTGGATCCAAGGGATCCCGAGATATTAAACTTTCAGATTGCCTGGATAAGAGAGCTTCCCATGTTGCTAATCCTGCTGGGTGATAAGAACACGTCCCACTCCCAGGTTGTGTTACACCTTTTACTTCGGCTGGGACAACGTGGTTTCATGAACTATTCCTTTGCATTGGAATATGACAACATGCAATTCTCACTGCAAGAATTTTTCTGCATATATCAAGATGATGGAAATATAATATATGGTCCTTTTGTAAGGCTGCCCAGAGAATCTCAGGAACTCTCTCTTTGTTGCCTTCGTTATATCTCTAATTTGGATTTGCATATGTTGAGGTCAATAGCTTATTGTTGCCTATGTCCAGAATTGGAACAGTATGTAATAATTCGAGTCATAGAGATCCTGCATTCAGCTTATAAATCTGGACATATTCAAATTGCGGATCACATTAGTTTCTTCATCACTTTGCTCTCCCGCTTCAGAGTTTTGCCAGAAAATGTTAATCCTGTTATGGAGAGAGATGTGAATATCTCAAATCGGGGGACTTTTAAATCAATCACTGGCATTGTTTGCTCGTGTCTGTCACAGATGGGCGATAGTTCTCTTGTTTTTAAAATACTAGAAAAAATGGTACTAGATCAAATGTTGCAAAACCTTCCGCTAGACAATGTATGTGCTATGCTTAGGATGCTTATTGCACTGGACTCTGAAGAGACAATAATTTCTGAACAAGCTTTTGTAAGCTTAGTCAAAATCCTTCCGCGATATCTTATTGACATTGTGCATTGCATTACTGAAGATGATGGGAAGGCCTCTGGTTCCCTTTCCTCGAGTGCATGCTGTTATTATCTTGTTCCTTGCTTTTTCTTATTTGTTAAAAGTCACAGACTTCTGGGTCTTGTGTCGAAGATGTTGGGGTCATGGATAAATGAAAGTTTGTCAATTTTACCTTGCGATCATACCCACTATGAAACAGACATTTCAAGCAGGGTAGAAGCAATCGTTTCAGTTCTTCTCTTGTTGCATAAGGATGACAAAATTTGGCAAATTATGTCTTCATTCAAGGCAGAGATTGACTGTATTTTGCAAAGCATCATCTCTATACAGTCCTCAGAGGAAATCAGCATGACCCTTCAAGAAAAGCACAAATTGAAATGTGCACATGATAGACTAAAGAACGCCACAAGTGCATTGCATGCTGAGATGCAGTCAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

902

Amino Acids

102.99

Weight (kDa)

7.29

Isoelectric Point (pI)

44.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ipi1_N PF12333 161 - 228 3.1e-08 Rix1 complex component involved in 60S ribosome maturation
TPR_TEX10 PF25781 513 - 655 4.9e-12 TEX10-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1908
AasI GACNNNNNNGTC 1 cut(s) 2385
Acc36I ACCTGC 1 cut(s) 820
AccII CGCG 2 cut(s) 42, 2254
AciI CCGC 5 cut(s) 42, 1931, 1966, 2150, 2252
AclWI GGATC 7 cut(s) 1214, 1496, 1505, 1509, 1518, 1885, 1941
AcsI RAATTY 5 cut(s) 563, 1235, 1244, 1697, 2529
AcuI CTGAAG 5 cut(s) 707, 1373, 1954, 2220, 2307
AfaI GTAC 8 cut(s) 365, 587, 810, 906, 1012, 1341, 1496, 2124
AfiI CCNNNNNNNGG 3 cut(s) 1034, 1484, 1600
AflII CTTAAG 2 cut(s) 332, 1195
AflIII ACRYGT 1 cut(s) 1587
AhdI GACNNNNNGTC 1 cut(s) 1375
AhlI ACTAGT 1 cut(s) 412
AjiI CACGTC 1 cut(s) 1590
AjnI CCWGG 6 cut(s) 457, 1161, 1305, 1497, 1538, 1599
AjuI GAANNNNNNNTTGG 2 cut(s) 879, 911
Alw21I GWGCWC 2 cut(s) 919, 2653
Alw26I GTCTC 2 cut(s) 1383, 2198
Alw44I GTGCAC 2 cut(s) 915, 2649
AlwI GGATC 7 cut(s) 1214, 1496, 1505, 1509, 1518, 1885, 1941
AlwNI CAGNNNCTG 1 cut(s) 821
Ama87I CYCGRG 3 cut(s) 191, 1514, 2320
AoxI GGCC 2 cut(s) 504, 2301
ApaLI GTGCAC 2 cut(s) 915, 2649
ApeKI GCWGC 3 cut(s) 787, 1261, 1753
ApoI RAATTY 5 cut(s) 563, 1235, 1244, 1697, 2529
Asp700I GAANNNNTTC 2 cut(s) 621, 1185
AspLEI GCGC 2 cut(s) 42, 1261
AspS9I GGNCC 1 cut(s) 1739
AsuC2I CCSGG 1 cut(s) 1218
AsuHPI GGTGA 2 cut(s) 410, 1589
AvaI CYCGRG 3 cut(s) 191, 1514, 2320
AvaII GGWCC 1 cut(s) 1739
BaeGI GKGCMC 2 cut(s) 919, 2653
BamHI GGATCC 2 cut(s) 1501, 1510
BauI CACGAG 1 cut(s) 2065
BbsI GAAGAC 2 cut(s) 1376, 2538
Bbv12I GWGCWC 2 cut(s) 919, 2653
BbvI GCAGC 3 cut(s) 774, 1248, 1740
BccI CCATC 6 cut(s) 496, 547, 1462, 1715, 2074, 2288
BciT130I CCWGG 6 cut(s) 459, 1163, 1307, 1499, 1540, 1601
BcnI CCSGG 1 cut(s) 1218
BcoDI GTCTC 2 cut(s) 1383, 2198
BcuI ACTAGT 1 cut(s) 412
BfaI CTAG 8 cut(s) 413, 872, 1250, 1479, 2111, 2126, 2153, 2707
BfmI CTRYAG 2 cut(s) 813, 900
BfrI CTTAAG 2 cut(s) 332, 1195
BfuAI ACCTGC 1 cut(s) 820
BisI GCNGC 3 cut(s) 788, 1262, 1754
BlsI GCNGC 3 cut(s) 789, 1263, 1755
BmcAI AGTACT 1 cut(s) 587
Bme1390I CCNGG 7 cut(s) 459, 1163, 1218, 1307, 1499, 1540, 1601
Bme18I GGWCC 1 cut(s) 1739
BmeRI GACNNNNNGTC 1 cut(s) 1375
BmeT110I CYCGRG 3 cut(s) 191, 1514, 2320
BmgBI CACGTC 1 cut(s) 1590
BmgT120I GGNCC 1 cut(s) 1739
BmiI GGNNCC 3 cut(s) 1503, 1512, 2311
BmrFI CCNGG 7 cut(s) 459, 1163, 1218, 1307, 1499, 1540, 1601
BmsI GCATC 7 cut(s) 215, 346, 760, 774, 2169, 2592, 2685
BpiI GAAGAC 2 cut(s) 1376, 2538
Bpu10I CCTNAGC 1 cut(s) 2174
BpuMI CCSGG 1 cut(s) 1218
BsaBI GATNNNNATC 1 cut(s) 1419
BsaJI CCNNGG 3 cut(s) 457, 1505, 1599
BsaWI WCCGGW 1 cut(s) 981
Bsc4I CCNNNNNNNGG 3 cut(s) 1034, 1484, 1600
Bse1I ACTGG 7 cut(s) 583, 658, 866, 916, 1376, 2056, 2196
Bse3DI GCAATG 3 cut(s) 719, 2275, 2681
Bse8I GATNNNNATC 1 cut(s) 1419
BseBI CCWGG 6 cut(s) 459, 1163, 1307, 1499, 1540, 1601
BseDI CCNNGG 3 cut(s) 457, 1505, 1599
BseGI GGATG 7 cut(s) 141, 337, 789, 840, 1147, 2184, 2527
BseJI GATNNNNATC 1 cut(s) 1419
BseLI CCNNNNNNNGG 3 cut(s) 1034, 1484, 1600
BseMI GCAATG 3 cut(s) 719, 2275, 2681
BseMII CTCAG 5 cut(s) 105, 1125, 1781, 2616, 2682
BseNI ACTGG 7 cut(s) 583, 658, 866, 916, 1376, 2056, 2196
BseRI GAGGAG 1 cut(s) 1478
BseSI GKGCMC 2 cut(s) 919, 2653
BseXI GCAGC 3 cut(s) 774, 1248, 1740
BseYI CCCAGC 3 cut(s) 824, 1573, 1627
BsgI GTGCAG 1 cut(s) 1175
Bsh1236I CGCG 2 cut(s) 42, 2254
BshFI GGCC 2 cut(s) 506, 2303
BsiHKAI GWGCWC 2 cut(s) 919, 2653
BsiHKCI CYCGRG 3 cut(s) 191, 1514, 2320
BsiSI CCGG 2 cut(s) 982, 1218
BslFI GGGAC 3 cut(s) 1576, 1644, 2047
BslI CCNNNNNNNGG 3 cut(s) 1034, 1484, 1600
BsmAI GTCTC 2 cut(s) 1383, 2198
BsmFI GGGAC 3 cut(s) 1576, 1644, 2047
BsmI GAATGC 5 cut(s) 106, 697, 1261, 1406, 1897
BsnI GGCC 2 cut(s) 506, 2303
BsoBI CYCGRG 3 cut(s) 191, 1514, 2320
Bsp1286I GDGCHC 2 cut(s) 919, 2653
Bsp143I GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
BspACI CCGC 5 cut(s) 42, 1931, 1966, 2150, 2252
BspANI GGCC 2 cut(s) 506, 2303
BspCNI CTCAG 5 cut(s) 106, 1126, 1780, 2615, 2683
BspFNI CGCG 2 cut(s) 42, 2254
BspHI TCATGA 1 cut(s) 1644
BspLI GGNNCC 3 cut(s) 1503, 1512, 2311
BspMAI CTGCAG 2 cut(s) 817, 904
BspMI ACCTGC 1 cut(s) 820
BspPI GGATC 7 cut(s) 1214, 1496, 1505, 1509, 1518, 1885, 1941
BspTI CTTAAG 2 cut(s) 332, 1195
BsrDI GCAATG 3 cut(s) 719, 2275, 2681
BsrI ACTGG 7 cut(s) 583, 658, 866, 916, 1376, 2056, 2196
BssECI CCNNGG 3 cut(s) 457, 1505, 1599
BssMI GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
BssSI CACGAG 1 cut(s) 2065
BssT1I CCWWGG 1 cut(s) 1505
Bst2BI CACGAG 1 cut(s) 2065
Bst2UI CCWGG 6 cut(s) 459, 1163, 1307, 1499, 1540, 1601
Bst4CI ACNGT 5 cut(s) 965, 1169, 1866, 2570, 2598
Bst6I CTCTTC 2 cut(s) 339, 2196
BstAFI CTTAAG 2 cut(s) 332, 1195
BstAPI GCANNNNNTGC 4 cut(s) 101, 821, 2061, 2687
BstC8I GCNNGC 6 cut(s) 7, 683, 792, 1490, 2329, 2688
BstDEI CTNAG 8 cut(s) 114, 1134, 1401, 1767, 2174, 2236, 2602, 2691
BstENI CCTNNNNNAGG 1 cut(s) 1482
BstF5I GGATG 7 cut(s) 141, 337, 789, 840, 1147, 2184, 2527
BstFNI CGCG 2 cut(s) 42, 2254
BstHHI GCGC 2 cut(s) 42, 1261
BstKTI GATC 7 cut(s) 1209, 1504, 1513, 1893, 1936, 2131, 2449
BstMAI GTCTC 2 cut(s) 1383, 2198
BstMBI GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
BstMWI GCNNNNNNNGC 8 cut(s) 101, 224, 821, 1570, 2061, 2179, 2678, 2687
BstNI CCWGG 6 cut(s) 459, 1163, 1307, 1499, 1540, 1601
BstNSI RCATGY 5 cut(s) 794, 1492, 1681, 2331, 2690
BstSCI CCNGG 7 cut(s) 457, 1161, 1216, 1305, 1497, 1538, 1599
BstSFI CTRYAG 2 cut(s) 813, 900
BstSLI GKGCMC 2 cut(s) 919, 2653
BstUI CGCG 2 cut(s) 42, 2254
BstV1I GCAGC 3 cut(s) 774, 1248, 1740
BstV2I GAAGAC 2 cut(s) 1376, 2538
BstX2I RGATCY 4 cut(s) 1206, 1501, 1510, 1890
BstYI RGATCY 4 cut(s) 1206, 1501, 1510, 1890
BsuRI GGCC 2 cut(s) 506, 2303
BtrI CACGTC 1 cut(s) 1590
BtsCI GGATG 7 cut(s) 141, 337, 789, 840, 1147, 2184, 2527
BtsI GCAGTG 2 cut(s) 234, 1688
BtsIMutI CAGTG 6 cut(s) 234, 453, 1174, 1688, 2049, 2189
BveI ACCTGC 1 cut(s) 820
Cac8I GCNNGC 6 cut(s) 7, 683, 792, 1490, 2329, 2688
CaiI CAGNNNCTG 1 cut(s) 821
CciI TCATGA 1 cut(s) 1644
CfoI GCGC 2 cut(s) 42, 1261
Cfr13I GGNCC 1 cut(s) 1739
CseI GACGC 4 cut(s) 9, 311, 1087, 1296
Csp6I GTAC 8 cut(s) 364, 586, 809, 905, 1011, 1340, 1495, 2123
CviQI GTAC 8 cut(s) 364, 586, 809, 905, 1011, 1340, 1495, 2123
DdeI CTNAG 8 cut(s) 114, 1134, 1401, 1767, 2174, 2236, 2602, 2691
DpnI GATC 7 cut(s) 1208, 1503, 1512, 1892, 1935, 2130, 2448
DpnII GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
DraI TTTAAA 3 cut(s) 1437, 2041, 2104
DrdI GACNNNNNNGTC 1 cut(s) 2385
DriI GACNNNNNGTC 1 cut(s) 1375
DseDI GACNNNNNNGTC 1 cut(s) 2385
Eam1104I CTCTTC 2 cut(s) 339, 2196
Eam1105I GACNNNNNGTC 1 cut(s) 1375
EarI CTCTTC 2 cut(s) 339, 2196
Eco130I CCWWGG 1 cut(s) 1505
Eco147I AGGCCT 1 cut(s) 2303
Eco32I GATATC 1 cut(s) 2258
Eco47I GGWCC 1 cut(s) 1739
Eco57I CTGAAG 5 cut(s) 707, 1373, 1954, 2220, 2307
Eco88I CYCGRG 3 cut(s) 191, 1514, 2320
EcoNI CCTNNNNNAGG 1 cut(s) 1482
EcoRII CCWGG 6 cut(s) 457, 1161, 1305, 1497, 1538, 1599
EcoRV GATATC 1 cut(s) 2258
EcoT14I CCWWGG 1 cut(s) 1505
ErhI CCWWGG 1 cut(s) 1505
FalI AAGNNNNNCTT 4 cut(s) 227, 259, 246, 278
FaqI GGGAC 3 cut(s) 1576, 1644, 2047
FauI CCCGC 1 cut(s) 1973
FauNDI CATATG 1 cut(s) 1818
Fnu4HI GCNGC 3 cut(s) 788, 1262, 1754
FokI GGATG 7 cut(s) 128, 324, 796, 827, 1154, 2191, 2534
Fsp4HI GCNGC 3 cut(s) 788, 1262, 1754
FspBI CTAG 8 cut(s) 413, 872, 1250, 1479, 2111, 2126, 2153, 2707
GlaI GCGC 2 cut(s) 41, 1260
GluI GCNGC 3 cut(s) 788, 1262, 1754
GsaI CCCAGC 3 cut(s) 828, 1577, 1631
HaeIII GGCC 2 cut(s) 506, 2303
HapII CCGG 2 cut(s) 982, 1218
HgaI GACGC 4 cut(s) 9, 311, 1087, 1296
HhaI GCGC 2 cut(s) 42, 1261
Hin6I GCGC 2 cut(s) 40, 1259
HinP1I GCGC 2 cut(s) 40, 1259
HindIII AAGCTT 2 cut(s) 2223, 2233
HinfI GANTC 6 cut(s) 622, 818, 1019, 1763, 1881, 2195
HpaII CCGG 2 cut(s) 982, 1218
HphI GGTGA 2 cut(s) 410, 1589
Hpy166II GTNNAC 5 cut(s) 232, 389, 761, 917, 2651
Hpy188I TCNGA 8 cut(s) 211, 1018, 1135, 1533, 1973, 2200, 2218, 2605
Hpy8I GTNNAC 5 cut(s) 232, 389, 761, 917, 2651
HpyAV CCTTC 9 cut(s) 208, 606, 1038, 1132, 1799, 2156, 2258, 2293, 2633
HpyCH4III ACNGT 5 cut(s) 965, 1169, 1866, 2570, 2598
HpyCH4IV ACGT 3 cut(s) 1013, 1589, 1636
HpyF10VI GCNNNNNNNGC 8 cut(s) 101, 224, 821, 1570, 2061, 2179, 2678, 2687
HpyF3I CTNAG 8 cut(s) 114, 1134, 1401, 1767, 2174, 2236, 2602, 2691
HpySE526I ACGT 3 cut(s) 1013, 1589, 1636
HspAI GCGC 2 cut(s) 40, 1259
Kzo9I GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
LmnI GCTCC 3 cut(s) 571, 709, 1039
Lsp1109I GCAGC 3 cut(s) 774, 1248, 1740
LweI GCATC 7 cut(s) 215, 346, 760, 774, 2169, 2592, 2685
MaeI CTAG 8 cut(s) 413, 872, 1250, 1479, 2111, 2126, 2153, 2707
MaeII ACGT 3 cut(s) 1013, 1589, 1636
MaeIII GTNAC 5 cut(s) 720, 1092, 1608, 2073, 2372
MalI GATC 7 cut(s) 1208, 1503, 1512, 1892, 1935, 2130, 2448
MboI GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
MfeI CAATTG 3 cut(s) 179, 537, 877
MflI RGATCY 4 cut(s) 1206, 1501, 1510, 1890
MhlI GDGCHC 2 cut(s) 919, 2653
MlyI GAGTC 2 cut(s) 1890, 2189
MmeI TCCRAC 2 cut(s) 687, 1209
MroXI GAANNNNTTC 2 cut(s) 621, 1185
MslI CAYNNNNRTG 2 cut(s) 924, 2520
MspCI CTTAAG 2 cut(s) 332, 1195
MspI CCGG 2 cut(s) 982, 1218
MspR9I CCNGG 7 cut(s) 459, 1163, 1218, 1307, 1499, 1540, 1601
MunI CAATTG 3 cut(s) 179, 537, 877
Mva1269I GAATGC 5 cut(s) 106, 697, 1261, 1406, 1897
MvaI CCWGG 6 cut(s) 459, 1163, 1307, 1499, 1540, 1601
MvnI CGCG 2 cut(s) 42, 2254
MwoI GCNNNNNNNGC 8 cut(s) 101, 224, 821, 1570, 2061, 2179, 2678, 2687
NciI CCSGG 1 cut(s) 1218
NdeI CATATG 1 cut(s) 1818
NdeII GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
NlaIV GGNNCC 3 cut(s) 1503, 1512, 2311
NmuCI GTSAC 2 cut(s) 2073, 2372
NspI RCATGY 5 cut(s) 794, 1492, 1681, 2331, 2690
PaeI GCATGC 4 cut(s) 794, 1492, 2331, 2690
PaeR7I CTCGAG 1 cut(s) 2320
PagI TCATGA 1 cut(s) 1644
PceI AGGCCT 1 cut(s) 2303
PctI GAATGC 5 cut(s) 106, 697, 1261, 1406, 1897
PdmI GAANNNNTTC 2 cut(s) 621, 1185
PfeI GAWTC 4 cut(s) 622, 818, 1019, 1763
PfoI TCCNGGA 2 cut(s) 1161, 1305
PkrI GCNGC 3 cut(s) 789, 1263, 1755
PleI GAGTC 2 cut(s) 1889, 2189
PpsI GAGTC 2 cut(s) 1889, 2189
PsiI TTATAA 1 cut(s) 1908
Psp6I CCWGG 6 cut(s) 457, 1161, 1305, 1497, 1538, 1599
PspFI CCCAGC 3 cut(s) 824, 1573, 1627
PspGI CCWGG 6 cut(s) 457, 1161, 1305, 1497, 1538, 1599
PspN4I GGNNCC 3 cut(s) 1503, 1512, 2311
PspPI GGNCC 1 cut(s) 1739
PspXI VCTCGAGB 1 cut(s) 2320
PstI CTGCAG 2 cut(s) 817, 904
PstNI CAGNNNCTG 1 cut(s) 821
PsuI RGATCY 4 cut(s) 1206, 1501, 1510, 1890
RsaI GTAC 8 cut(s) 365, 587, 810, 906, 1012, 1341, 1496, 2124
RsaNI GTAC 8 cut(s) 364, 586, 809, 905, 1011, 1340, 1495, 2123
RseI CAYNNNNRTG 2 cut(s) 924, 2520
SatI GCNGC 3 cut(s) 788, 1262, 1754
Sau3AI GATC 7 cut(s) 1206, 1501, 1510, 1890, 1933, 2128, 2446
Sau96I GGNCC 1 cut(s) 1739
ScaI AGTACT 1 cut(s) 587
SchI GAGTC 2 cut(s) 1890, 2189
ScrFI CCNGG 7 cut(s) 459, 1163, 1218, 1307, 1499, 1540, 1601
SduI GDGCHC 2 cut(s) 919, 2653
SfaNI GCATC 7 cut(s) 215, 346, 760, 774, 2169, 2592, 2685
SfcI CTRYAG 2 cut(s) 813, 900
Sfr274I CTCGAG 1 cut(s) 2320
SinI GGWCC 1 cut(s) 1739
SlaI CTCGAG 1 cut(s) 2320
SmiMI CAYNNNNRTG 2 cut(s) 924, 2520
SmlI CTYRAG 3 cut(s) 332, 1195, 2320
SmoI CTYRAG 3 cut(s) 332, 1195, 2320
SpeI ACTAGT 1 cut(s) 412
SphI GCATGC 4 cut(s) 794, 1492, 2331, 2690
SseBI AGGCCT 1 cut(s) 2303
SsiI CCGC 5 cut(s) 42, 1931, 1966, 2150, 2252
SspI AATATT 2 cut(s) 1154, 1185
SspMI CTAG 8 cut(s) 413, 872, 1250, 1479, 2111, 2126, 2153, 2707
StuI AGGCCT 1 cut(s) 2303
StyD4I CCNGG 7 cut(s) 457, 1161, 1216, 1305, 1497, 1538, 1599
StyI CCWWGG 1 cut(s) 1505
TaaI ACNGT 5 cut(s) 965, 1169, 1866, 2570, 2598
TaiI ACGT 3 cut(s) 1016, 1592, 1639
TaqI TCGA 6 cut(s) 48, 418, 547, 1879, 2321, 2396
TatI WGTACW 2 cut(s) 585, 904
TfiI GAWTC 4 cut(s) 622, 818, 1019, 1763
TscAI CASTG 6 cut(s) 234, 453, 1174, 1695, 2056, 2196
TseFI GTSAC 2 cut(s) 2073, 2372
TseI GCWGC 3 cut(s) 787, 1261, 1753
Tsp45I GTSAC 2 cut(s) 2073, 2372
TspDTI ATGAA 8 cut(s) 130, 1100, 1633, 1661, 1939, 2436, 2475, 2538
TspGWI ACGGA 2 cut(s) 134, 284
TspRI CASTG 6 cut(s) 234, 453, 1174, 1695, 2056, 2196
Vha464I CTTAAG 2 cut(s) 332, 1195
VneI GTGCAC 2 cut(s) 915, 2649
VpaK11BI GGWCC 1 cut(s) 1739
XagI CCTNNNNNAGG 1 cut(s) 1482
XapI RAATTY 5 cut(s) 563, 1235, 1244, 1697, 2529
XbaI TCTAGA 1 cut(s) 1249
XceI RCATGY 5 cut(s) 794, 1492, 1681, 2331, 2690
XhoI CTCGAG 1 cut(s) 2320
XmnI GAANNNNTTC 2 cut(s) 621, 1185
XspI CTAG 8 cut(s) 413, 872, 1250, 1479, 2111, 2126, 2153, 2707
ZrmI AGTACT 1 cut(s) 587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.