MD12G1040000.v1.1

Testis-expressed sequence 10 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0001389
Physical Location & Seq
Reverse (-)
4327873 .. 4340312
12440 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1040000.v1.1.491

Sequence Viewer

Length: 2850 bp
ATGGCACGCTCCAAGGCTCCGGCAAAGAAGCAGCAAAAGCGCGGCATCGACTTCAAAAAAATAAAGCGAAAGATTGGCAGAAAGTTGCCGCCACCAAAGAACGCTACGAATACTGAAATTAAGTCCAAAGCAATTGTTCTTCCCGAGCAGAGTGTGGCATCGGAGAAGGCAGGATTAGCAGTGAACAAGAAAGGTTTAACATTAAAAGAACTTCTTCAGCAAACATCTCATTACAACCCGAAAGTTCGTAAAGATGCATTATTGGGTATGAAGGATTTACTCCTTAGGTATCCAGAAGAGTTGAGGTTGCACAAGTACGCTGTTGTTGAAAAGCTGCGTGAACGCATTGGCGATGACGATAGGCTGGTTCGAGATACGCTATATCAACTTTTTAAGTCAGTAATTTTACCTGGCTGTAAGGAGGATAATCAAGAGCTGTTGATTTCCTTGATGATGGCCTATATATTTAATGCAATGACACATTTAGCAATCGATGTTCGGTTGATGGCTTTCAAATTTTTGGAGCTTGCTATCCAATACCATCCACCTTCCTTCTTCTTGAATGCTGAAAAGATTCTTCAAAGCTTTGAGGATATTCTGCAGAGGAACCAGTTTTTTTTAGAGGACAAGGGCATGCTCAAGACTGCTCTTGCTGGCCTGGAACTATGCTTGTCGCTTTTGCCATGTAACACGAGAGAAGCTGGCTCATGTGAAAAGGTTTTTTTAAGTTTTCTTAAAATCCGGAGGGTTTGCATGTTTTCTTTCATTGTTTGTATCGTGCAGCATGAGCCTGCTTGTTATCTTGTACCTTCCAGCTGTATTCTTTCATTGCACATTATTGTTGAAACTTTGCTGTTAAATTTTGTTATTGTTGTTATTATAATCATCATTTTCCTATACTTAGTTAGTTTAGACCCCTCGTGCAAAGCATGTGTCAGTCAGAAAGCCATGAAAAGTAGCCTCGACTACACATGTGAAAGTTTTGAAAATAAATTTAATGGTGCTGGACAAGGGAGACTGCATGCTTTTGAGCCTGATGTACCTGCAAAATCTGCTGGATGTTCAATCATCATCCTGAAACTAAAAGACCTTGTCCCAGTTCTAGTAAATTGTTTCCAAGATTTTATTCCGGAAGTTCAGACTGGCTCTCTTCTTAATACACAATCATTTGATTGTATGATGTCCATACTTAACAGCATAAACCTTGCAGTCAAATTCTTCTTGTATATGACTGATGAGGGTAAACTAGAATCACAACCTTCTCAAGGGGGGGGATGGTGTGACTGTGATGATGTTAAATATTTTGTATTGAACACTGTGATGACAGAAATATTTTTGCACTTAAGCAAATGGATCTGCCCTCCTCCTGCTTTATTTGAGAAAGTTTTAGCATTTCTGGAAGATTCTCTGCTTGGAAAGGTATGCAATGACACGCTTTCTGGTAAGGAAGTCTGGGAGAAGCATTTAATTTCACTTCTTCCTTTTGTTCCAAAACTTGTTTCTCAAGTGGCAGATGACTGGAAGTCTCGCCTTCTTCAGGCTTTTAGTGAGGCATTCAAGGACTGCAATCCTGTATCCCCTTTAAAGTTGGCTTGTCTTTCCGTACTAGAGGAGCTGCTAGTTCCCAGACAAGATATGCTGTACCTGGATCCGAGTATTCCCGAGATATTAGACTTTCAGATTACCTGGATAAGAGAGCTTCCTATGTTGGTTATCCTGCTGGGTGATAAAAACCCATACTATTCCCAGGTTGTGCTGCACCTTCTACTTCGCCTGGGACAACGTGCTTTAGTGAACTCTTCCTTTGCATGGGAATATGACAACATGCAATTGTCACTTGAAGAATTTTTTGGCATTAGTCAAGATGATGGAAATGTATCATATGGTCCCTTTGTAAGGCTTCCCAGAGATTCTCAAGAACTTTCTCTTTCCTGCCTCTGTTATATCTCTAATTTGGGTCCACTTTTGCTGAAGTCAATAGCTTACTGTTGCCTATGTCCTGATCTGGAACAATATGTATTATTTCGAACCATAGAGGTCCTGAATTCAGCTTATAAATCTGGGTATATTCAGATTGTTGATCACATTAGTTGCTTGATCACTTTGCTCTCCCGTTTCAGAGTTTTCCCAGAAAATATCGTTCCTGTTAGAGAGAGTGATGTGAATATCTCGAATCGAGGGACTTTTAAGTCACTCAGCCGAATTGTCTGCTCATGCCTGTCACAGATGGGTGATAATACTCTTGTTTTGCAGATGCTAGAGAAAATTATACTCGATCAGATGTCTCAAAATCCTCCTCTAGACAACGTTTGTGCTATGCTTAGGACGCTTATTACACTGGACTCTAATACCACGATAATTTCCCAAAGAGCTTTTATAAGCCTAGGCAATATCCTTCCACGGTATCTGATTGACGTTGTGCAGTGCATTGTTGAAGATGACAAGAAGACCACCGTTTCCATTTCTTCAAGTTCATGTCGTTATTATCTCATCCCTTGCTTTGTCTTGTTTGATAAAAGTCACGAACTTCTGAATCTTGTATTGAATACGTTGGGGTCATGGATAACTGAAAGTAGTTTGTCGCATGTAACTGGTGATCATACCCACTACGCAACTGACATTTCAAGTATGGTAGATGCAGTCATTTTCCTGCTTCAATTGATGCATATGGATGACAAAATCTGCCAAATCATATCTTCGTTCAAGGCGGAGATTGACTATATCATGGAAGGCATCAGGTTATTACAGGTATTTTCATTTGTACCCTCAGGCATAACCCTGCATATTCAGAGAATCTTGATTTTTTTTCCCCTTACAGCATACCTGAAGCTCGTCCTCATTCGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ipi1_N

Protein Analysis

950

Amino Acids

107.52

Weight (kDa)

6.52

Isoelectric Point (pI)

45.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ipi1_N PF12333 146 - 204 4.3e-07 Rix1 complex component involved in 60S ribosome maturation
TPR_TEX10 PF25781 562 - 703 7.8e-09 TEX10-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 881, 2055, 2378
AasI GACNNNNNNGTC 1 cut(s) 2188
Acc36I ACCTGC 1 cut(s) 1051
AccII CGCG 1 cut(s) 42
AccIII TCCGGA 2 cut(s) 741, 1129
AciI CCGC 3 cut(s) 42, 89, 2708
AclI AACGTT 1 cut(s) 2307
AclWI GGATC 3 cut(s) 1361, 1643, 1656
AcsI RAATTY 7 cut(s) 515, 859, 992, 1214, 1844, 2044, 2844
AcuI CTGAAG 4 cut(s) 200, 1520, 1991, 2846
AfaI GTAC 6 cut(s) 317, 807, 1041, 1605, 1643, 2763
AfiI CCNNNNNNNGG 4 cut(s) 1265, 1537, 1809, 1896
AflII CTTAAG 1 cut(s) 1342
AflIII ACRYGT 1 cut(s) 971
AhdI GACNNNNNGTC 1 cut(s) 1522
AjnI CCWGG 6 cut(s) 409, 657, 1644, 1685, 1746, 1773
AjuI GAANNNNNNNTTGG 6 cut(s) 1110, 1142, 1483, 1515, 1833, 1865
Alw26I GTCTC 3 cut(s) 1009, 1530, 2289
AlwI GGATC 3 cut(s) 1361, 1643, 1656
Ama87I CYCGRG 2 cut(s) 143, 1661
Aor13HI TCCGGA 2 cut(s) 741, 1129
AoxI GGCC 2 cut(s) 456, 655
ApeKI GCWGC 5 cut(s) 31, 334, 781, 1615, 1756
ApoI RAATTY 7 cut(s) 515, 859, 992, 1214, 1844, 2044, 2844
ArsI GACNNNNNNTTYG 2 cut(s) 918, 950
Asp700I GAANNNNTTC 2 cut(s) 213, 573
AspA2I CCTAGG 1 cut(s) 2383
AspLEI GCGC 1 cut(s) 42
AspS9I GGNCC 3 cut(s) 1886, 1958, 2038
AsuHPI GGTGA 3 cut(s) 1736, 2243, 2606
AsuII TTCGAA 2 cut(s) 2026, 2842
AvaI CYCGRG 2 cut(s) 143, 1661
AvaII GGWCC 3 cut(s) 1886, 1958, 2038
AvrII CCTAGG 1 cut(s) 2383
AxyI CCTNAGG 2 cut(s) 284, 2767
BamHI GGATCC 1 cut(s) 1648
BauI CACGAG 2 cut(s) 691, 919
BbsI GAAGAC 1 cut(s) 2453
BbvI GCAGC 5 cut(s) 43, 321, 793, 1602, 1743
BccI CCATC 6 cut(s) 448, 499, 549, 1269, 1862, 2221
BcgI CGANNNNNNTGC 2 cut(s) 2190, 2224
BciT130I CCWGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
BciVI GTATCC 2 cut(s) 300, 1585
BclI TGATCA 3 cut(s) 2080, 2097, 2596
BcoDI GTCTC 3 cut(s) 1009, 1530, 2289
BfaI CTAG 7 cut(s) 1103, 1247, 1607, 1619, 2258, 2300, 2384
BfmI CTRYAG 1 cut(s) 599
BfrI CTTAAG 1 cut(s) 1342
BfuAI ACCTGC 1 cut(s) 1051
BfuI GTATCC 2 cut(s) 300, 1585
BisI GCNGC 7 cut(s) 32, 43, 89, 335, 782, 1616, 1757
BlnI CCTAGG 1 cut(s) 2383
BlsI GCNGC 7 cut(s) 33, 44, 90, 336, 783, 1617, 1758
Bme1390I CCNGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
Bme18I GGWCC 3 cut(s) 1886, 1958, 2038
BmeRI GACNNNNNGTC 1 cut(s) 1522
BmeT110I CYCGRG 2 cut(s) 143, 1661
BmgT120I GGNCC 3 cut(s) 1886, 1958, 2038
BmiI GGNNCC 5 cut(s) 18, 608, 1650, 1888, 1959
BmrFI CCNGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
BmrI ACTGGG 1 cut(s) 1091
BmsI GCATC 7 cut(s) 54, 167, 244, 2244, 2626, 2652, 2742
BmuI ACTGGG 1 cut(s) 1091
BpiI GAAGAC 1 cut(s) 2453
Bpu10I CCTNAGC 1 cut(s) 2321
Bpu14I TTCGAA 2 cut(s) 2026, 2842
BpuEI CTTGAG 4 cut(s) 623, 1248, 1488, 1899
Bsa29I ATCGAT 1 cut(s) 492
BsaJI CCNNGG 5 cut(s) 12, 1746, 1774, 2383, 2399
BsaWI WCCGGW 2 cut(s) 741, 1129
Bsc4I CCNNNNNNNGG 4 cut(s) 1265, 1537, 1809, 1896
Bse1I ACTGG 6 cut(s) 610, 1097, 1147, 1523, 2343, 2596
Bse21I CCTNAGG 2 cut(s) 284, 2767
Bse3DI GCAATG 3 cut(s) 480, 827, 1432
BseAI TCCGGA 2 cut(s) 741, 1129
BseBI CCWGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
BseCI ATCGAT 1 cut(s) 492
BseDI CCNNGG 5 cut(s) 12, 1746, 1774, 2383, 2399
BseGI GGATG 6 cut(s) 541, 1064, 1071, 1280, 2490, 2677
BseLI CCNNNNNNNGG 4 cut(s) 1265, 1537, 1809, 1896
BseMI GCAATG 3 cut(s) 480, 827, 1432
BseMII CTCAG 2 cut(s) 2209, 2781
BseNI ACTGG 6 cut(s) 610, 1097, 1147, 1523, 2343, 2596
BseRI GAGGAG 3 cut(s) 1353, 1625, 2286
BseXI GCAGC 5 cut(s) 43, 321, 793, 1602, 1743
BseYI CCCAGC 1 cut(s) 1720
BsgI GTGCAG 3 cut(s) 800, 1742, 2441
Bsh1236I CGCG 1 cut(s) 42
BshFI GGCC 2 cut(s) 458, 657
BshVI ATCGAT 1 cut(s) 492
BsiHKCI CYCGRG 2 cut(s) 143, 1661
BsiSI CCGG 3 cut(s) 20, 742, 1130
BslFI GGGAC 4 cut(s) 1079, 1791, 1872, 2194
BslI CCNNNNNNNGG 4 cut(s) 1265, 1537, 1809, 1896
BsmAI GTCTC 3 cut(s) 1009, 1530, 2289
BsmFI GGGAC 4 cut(s) 1079, 1791, 1872, 2194
BsmI GAATGC 2 cut(s) 568, 1553
BsnI GGCC 2 cut(s) 458, 657
BsoBI CYCGRG 2 cut(s) 143, 1661
Bsp119I TTCGAA 2 cut(s) 2026, 2842
Bsp13I TCCGGA 2 cut(s) 741, 1129
Bsp143I GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
BspACI CCGC 3 cut(s) 42, 89, 2708
BspANI GGCC 2 cut(s) 458, 657
BspCNI CTCAG 2 cut(s) 2208, 2780
BspDI ATCGAT 1 cut(s) 492
BspEI TCCGGA 2 cut(s) 741, 1129
BspFNI CGCG 1 cut(s) 42
BspLI GGNNCC 5 cut(s) 18, 608, 1650, 1888, 1959
BspMAI CTGCAG 1 cut(s) 603
BspMI ACCTGC 1 cut(s) 1051
BspPI GGATC 3 cut(s) 1361, 1643, 1656
BspT104I TTCGAA 2 cut(s) 2026, 2842
BspTI CTTAAG 1 cut(s) 1342
BsrDI GCAATG 3 cut(s) 480, 827, 1432
BsrI ACTGG 6 cut(s) 610, 1097, 1147, 1523, 2343, 2596
BssECI CCNNGG 5 cut(s) 12, 1746, 1774, 2383, 2399
BssMI GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
BssSI CACGAG 2 cut(s) 691, 919
BssT1I CCWWGG 2 cut(s) 12, 2383
Bst2BI CACGAG 2 cut(s) 691, 919
Bst2UI CCWGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
Bst4CI ACNGT 5 cut(s) 1286, 1318, 1988, 2403, 2455
Bst6I CTCTTC 3 cut(s) 291, 1155, 1804
BstAFI CTTAAG 1 cut(s) 1342
BstAPI GCANNNNNTGC 1 cut(s) 1052
BstBI TTCGAA 2 cut(s) 2026, 2842
BstC8I GCNNGC 7 cut(s) 7, 528, 635, 655, 703, 792, 1023
BstDEI CTNAG 5 cut(s) 284, 901, 2195, 2321, 2767
BstDSI CCRYGG 1 cut(s) 2399
BstENI CCTNNNNNAGG 3 cut(s) 1263, 1535, 1894
BstF5I GGATG 6 cut(s) 541, 1064, 1071, 1280, 2490, 2677
BstFNI CGCG 1 cut(s) 42
BstHHI GCGC 1 cut(s) 42
BstKTI GATC 7 cut(s) 1356, 1651, 2005, 2083, 2100, 2278, 2599
BstMAI GTCTC 3 cut(s) 1009, 1530, 2289
BstMBI GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
BstMWI GCNNNNNNNGC 5 cut(s) 37, 176, 787, 1052, 2326
BstNI CCWGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
BstNSI RCATGY 7 cut(s) 637, 757, 933, 975, 1025, 1828, 2588
BstSCI CCNGG 6 cut(s) 409, 657, 1644, 1685, 1746, 1773
BstSFI CTRYAG 1 cut(s) 599
BstUI CGCG 1 cut(s) 42
BstV1I GCAGC 5 cut(s) 43, 321, 793, 1602, 1743
BstV2I GAAGAC 1 cut(s) 2453
BstX2I RGATCY 2 cut(s) 1353, 1648
BstYI RGATCY 2 cut(s) 1353, 1648
Bsu15I ATCGAT 1 cut(s) 492
Bsu36I CCTNAGG 2 cut(s) 284, 2767
BsuI GTATCC 2 cut(s) 300, 1585
BsuRI GGCC 2 cut(s) 458, 657
BsuTUI ATCGAT 1 cut(s) 492
BtgI CCRYGG 1 cut(s) 2399
BtgZI GCGATG 1 cut(s) 366
BtsCI GGATG 6 cut(s) 541, 1064, 1071, 1280, 2490, 2677
BtsI GCAGTG 2 cut(s) 186, 2429
BtsIMutI CAGTG 4 cut(s) 186, 1314, 2336, 2429
BveI ACCTGC 1 cut(s) 1051
Cac8I GCNNGC 7 cut(s) 7, 528, 635, 655, 703, 792, 1023
CfoI GCGC 1 cut(s) 42
Cfr13I GGNCC 3 cut(s) 1886, 1958, 2038
ClaI ATCGAT 1 cut(s) 492
CseI GACGC 1 cut(s) 2335
Csp6I GTAC 6 cut(s) 316, 806, 1040, 1604, 1642, 2762
CviQI GTAC 6 cut(s) 316, 806, 1040, 1604, 1642, 2762
DdeI CTNAG 5 cut(s) 284, 901, 2195, 2321, 2767
DpnI GATC 7 cut(s) 1355, 1650, 2004, 2082, 2099, 2277, 2598
DpnII GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
DraI TTTAAA 1 cut(s) 1584
DrdI GACNNNNNNGTC 1 cut(s) 2188
DriI GACNNNNNGTC 1 cut(s) 1522
DseDI GACNNNNNNGTC 1 cut(s) 2188
Eam1104I CTCTTC 3 cut(s) 291, 1155, 1804
Eam1105I GACNNNNNGTC 1 cut(s) 1522
EarI CTCTTC 3 cut(s) 291, 1155, 1804
EciI GGCGGA 1 cut(s) 2723
Eco130I CCWWGG 2 cut(s) 12, 2383
Eco47I GGWCC 3 cut(s) 1886, 1958, 2038
Eco57I CTGAAG 4 cut(s) 200, 1520, 1991, 2846
Eco81I CCTNAGG 2 cut(s) 284, 2767
Eco88I CYCGRG 2 cut(s) 143, 1661
EcoNI CCTNNNNNAGG 3 cut(s) 1263, 1535, 1894
EcoO109I RGGNCCY 1 cut(s) 2038
EcoRI GAATTC 1 cut(s) 2044
EcoRII CCWGG 6 cut(s) 409, 657, 1644, 1685, 1746, 1773
EcoT14I CCWWGG 2 cut(s) 12, 2383
EcoT22I ATGCAT 2 cut(s) 259, 2667
ErhI CCWWGG 2 cut(s) 12, 2383
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FaqI GGGAC 4 cut(s) 1079, 1791, 1872, 2194
FauNDI CATATG 2 cut(s) 1882, 2667
FbaI TGATCA 3 cut(s) 2080, 2097, 2596
Fnu4HI GCNGC 7 cut(s) 32, 43, 89, 335, 782, 1616, 1757
FokI GGATG 6 cut(s) 528, 1058, 1071, 1287, 2477, 2684
Fsp4HI GCNGC 7 cut(s) 32, 43, 89, 335, 782, 1616, 1757
FspBI CTAG 7 cut(s) 1103, 1247, 1607, 1619, 2258, 2300, 2384
GlaI GCGC 1 cut(s) 41
GluI GCNGC 7 cut(s) 32, 43, 89, 335, 782, 1616, 1757
GsaI CCCAGC 1 cut(s) 1724
HaeIII GGCC 2 cut(s) 458, 657
HapII CCGG 3 cut(s) 20, 742, 1130
HgaI GACGC 1 cut(s) 2335
HhaI GCGC 1 cut(s) 42
Hin6I GCGC 1 cut(s) 40
HinP1I GCGC 1 cut(s) 40
HindIII AAGCTT 1 cut(s) 583
HinfI GANTC 8 cut(s) 574, 1250, 1403, 1910, 2173, 2342, 2533, 2793
HpaII CCGG 3 cut(s) 20, 742, 1130
HphI GGTGA 3 cut(s) 1736, 2243, 2606
Hpy166II GTNNAC 5 cut(s) 184, 341, 1244, 1795, 1961
Hpy8I GTNNAC 5 cut(s) 184, 341, 1244, 1795, 1961
HpyCH4III ACNGT 5 cut(s) 1286, 1318, 1988, 2403, 2455
HpyCH4IV ACGT 4 cut(s) 1783, 2307, 2415, 2549
HpyF10VI GCNNNNNNNGC 5 cut(s) 37, 176, 787, 1052, 2326
HpyF3I CTNAG 5 cut(s) 284, 901, 2195, 2321, 2767
HpySE526I ACGT 4 cut(s) 1783, 2307, 2415, 2549
HspAI GCGC 1 cut(s) 40
Kpn2I TCCGGA 2 cut(s) 741, 1129
Ksp22I TGATCA 3 cut(s) 2080, 2097, 2596
Kzo9I GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
LmnI GCTCC 4 cut(s) 14, 22, 523, 1612
Lsp1109I GCAGC 5 cut(s) 43, 321, 793, 1602, 1743
LweI GCATC 7 cut(s) 54, 167, 244, 2244, 2626, 2652, 2742
MaeI CTAG 7 cut(s) 1103, 1247, 1607, 1619, 2258, 2300, 2384
MaeII ACGT 4 cut(s) 1783, 2307, 2415, 2549
MaeIII GTNAC 7 cut(s) 686, 1280, 1833, 2190, 2220, 2519, 2587
MalI GATC 7 cut(s) 1355, 1650, 2004, 2082, 2099, 2277, 2598
MboI GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
MfeI CAATTG 3 cut(s) 132, 1829, 2657
MflI RGATCY 2 cut(s) 1353, 1648
MlyI GAGTC 1 cut(s) 2336
Mph1103I ATGCAT 2 cut(s) 259, 2667
MroI TCCGGA 2 cut(s) 741, 1129
MroXI GAANNNNTTC 2 cut(s) 213, 573
MslI CAYNNNNRTG 2 cut(s) 1319, 2670
MspA1I CMGCKG 1 cut(s) 816
MspCI CTTAAG 1 cut(s) 1342
MspI CCGG 3 cut(s) 20, 742, 1130
MspR9I CCNGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
MunI CAATTG 3 cut(s) 132, 1829, 2657
Mva1269I GAATGC 2 cut(s) 568, 1553
MvaI CCWGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
MvnI CGCG 1 cut(s) 42
MwoI GCNNNNNNNGC 5 cut(s) 37, 176, 787, 1052, 2326
NdeI CATATG 2 cut(s) 1882, 2667
NdeII GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
NlaIV GGNNCC 5 cut(s) 18, 608, 1650, 1888, 1959
NmuCI GTSAC 5 cut(s) 1280, 1833, 2190, 2220, 2519
NsiI ATGCAT 2 cut(s) 259, 2667
NspI RCATGY 7 cut(s) 637, 757, 933, 975, 1025, 1828, 2588
NspV TTCGAA 2 cut(s) 2026, 2842
PaeI GCATGC 2 cut(s) 637, 1025
PciI ACATGT 1 cut(s) 971
PctI GAATGC 2 cut(s) 568, 1553
PdmI GAANNNNTTC 2 cut(s) 213, 573
PfeI GAWTC 7 cut(s) 574, 1250, 1403, 1910, 2173, 2533, 2793
PflFI GACNNNGTC 1 cut(s) 1091
PkrI GCNGC 7 cut(s) 33, 44, 90, 336, 783, 1617, 1758
PleI GAGTC 1 cut(s) 2336
PpsI GAGTC 1 cut(s) 2336
PpuMI RGGWCCY 1 cut(s) 2038
PscI ACATGT 1 cut(s) 971
PsiI TTATAA 3 cut(s) 881, 2055, 2378
Psp1406I AACGTT 1 cut(s) 2307
Psp5II RGGWCCY 1 cut(s) 2038
Psp6I CCWGG 6 cut(s) 409, 657, 1644, 1685, 1746, 1773
PspFI CCCAGC 1 cut(s) 1720
PspGI CCWGG 6 cut(s) 409, 657, 1644, 1685, 1746, 1773
PspN4I GGNNCC 5 cut(s) 18, 608, 1650, 1888, 1959
PspPI GGNCC 3 cut(s) 1886, 1958, 2038
PspPPI RGGWCCY 1 cut(s) 2038
PstI CTGCAG 1 cut(s) 603
PsuI RGATCY 2 cut(s) 1353, 1648
PsyI GACNNNGTC 1 cut(s) 1091
PvuII CAGCTG 1 cut(s) 816
RsaI GTAC 6 cut(s) 317, 807, 1041, 1605, 1643, 2763
RsaNI GTAC 6 cut(s) 316, 806, 1040, 1604, 1642, 2762
RseI CAYNNNNRTG 2 cut(s) 1319, 2670
SatI GCNGC 7 cut(s) 32, 43, 89, 335, 782, 1616, 1757
Sau3AI GATC 7 cut(s) 1353, 1648, 2002, 2080, 2097, 2275, 2596
Sau96I GGNCC 3 cut(s) 1886, 1958, 2038
SchI GAGTC 1 cut(s) 2336
ScrFI CCNGG 6 cut(s) 411, 659, 1646, 1687, 1748, 1775
SfaNI GCATC 7 cut(s) 54, 167, 244, 2244, 2626, 2652, 2742
SfcI CTRYAG 1 cut(s) 599
SfuI TTCGAA 2 cut(s) 2026, 2842
SinI GGWCC 3 cut(s) 1886, 1958, 2038
SmiMI CAYNNNNRTG 2 cut(s) 1319, 2670
SmlI CTYRAG 5 cut(s) 638, 1263, 1342, 1503, 1914
SmoI CTYRAG 5 cut(s) 638, 1263, 1342, 1503, 1914
SphI GCATGC 2 cut(s) 637, 1025
SsiI CCGC 3 cut(s) 42, 89, 2708
SspI AATATT 2 cut(s) 1301, 1332
SspMI CTAG 7 cut(s) 1103, 1247, 1607, 1619, 2258, 2300, 2384
StyD4I CCNGG 6 cut(s) 409, 657, 1644, 1685, 1746, 1773
StyI CCWWGG 2 cut(s) 12, 2383
TaaI ACNGT 5 cut(s) 1286, 1318, 1988, 2403, 2455
TaiI ACGT 4 cut(s) 1786, 2310, 2418, 2552
TaqI TCGA 9 cut(s) 48, 370, 492, 963, 2026, 2171, 2176, 2274, 2842
TauI GCSGC 2 cut(s) 45, 91
TfiI GAWTC 7 cut(s) 574, 1250, 1403, 1910, 2173, 2533, 2793
TscAI CASTG 4 cut(s) 186, 1321, 2343, 2429
TseFI GTSAC 5 cut(s) 1280, 1833, 2190, 2220, 2519
TseI GCWGC 5 cut(s) 31, 334, 781, 1615, 1756
Tsp45I GTSAC 5 cut(s) 1280, 1833, 2190, 2220, 2519
TspDTI ATGAA 6 cut(s) 284, 754, 816, 965, 2463, 2745
TspGWI ACGGA 1 cut(s) 1591
TspRI CASTG 4 cut(s) 186, 1321, 2343, 2429
Tth111I GACNNNGTC 1 cut(s) 1091
Vha464I CTTAAG 1 cut(s) 1342
VpaK11BI GGWCC 3 cut(s) 1886, 1958, 2038
XagI CCTNNNNNAGG 3 cut(s) 1263, 1535, 1894
XapI RAATTY 7 cut(s) 515, 859, 992, 1214, 1844, 2044, 2844
XbaI TCTAGA 1 cut(s) 2299
XceI RCATGY 7 cut(s) 637, 757, 933, 975, 1025, 1828, 2588
XmaJI CCTAGG 1 cut(s) 2383
XmnI GAANNNNTTC 2 cut(s) 213, 573
XspI CTAG 7 cut(s) 1103, 1247, 1607, 1619, 2258, 2300, 2384
Zsp2I ATGCAT 2 cut(s) 259, 2667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.