MD10G1053900.v1.1

Testis-expressed sequence 10 protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
7323803 .. 7336726
12924 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1053900.v1.1.491

Sequence Viewer

Length: 2664 bp
ATGGCACGCTCCAAGGCTCCGGCAAAGAAGCAGCAAAAGCGAGGCATCGACTTCAAAAAAATAAAGCGAAAGATTGGCAGAAAGTTGCCGCCACCAAAGAACGCCACGAATACTGAAATTAAGTCCAAAGCAATTGTTCTTCCCGAACAGAGTGTGGCATCGGAGAAGGCAGGATTAGCAGTGAACAAGAAAGGTTTAACGTTGAAAGAACTTCTTCAGCAAACATCTCATTACAACCCAAAAGTTCGTAAAGATGCATTATTGGGTATGAAGGATTTACTCCTTAGGTATCCAGAAGAGTTGAGGTTGCACAAGTATGCTGTTGTTGAAAAGCTGCGTGAACGCATTGGCGATGACGATAGGCTGGTTCGAGATACGCTATATCAACTTTTTAAGTCAGTAATTTTACCTGGCTGTAAGGAGGATAATCAAGAGCTGTTGATTTCCTTGATGATGGCCTATATATTTAATGCAATGACACATTTAGCAATCGATGTTCGGTTGATGGCTTTCAAATTTTTGGAGCTTGCTATCCAATACCATCCACCTTCCTTCTTCTTGAATGCTGAAAAGATTCTTCAAAGCTTTGAGGATATTCTGCGGAGGAACCAATTTTTTTTAGAGGACAAGGGCAAGCTCAAGACTGCTCTTGCCGTCCTGGAACTATGCTTGTCGCTTTTGCCATGTAACAAGAGAGAAGCTCGCTCATGTGAAAAGAATGGTGCTGGACAAGGGATACTGCATGCTTTTGAGCCTGATGTACCTGCAAAATCTGCTGGATGTTCAATCATCATCCCAAAACTAAAGGATCTTGTCCCATTTCTAGTAAATTGTTTCCAAGATTTTATTCCGGAAGTTCAGACTGGCTCTCTTCTTAATACACAATCATTTGATTGTATGCTGTCCATACTTAACAGCATAAACCTTGCAGTCAAATTCTTCTTTTATATGACTGATGAGGGTAAACTAGAATCACAACCTTCTCAAGGGGGGCATGGTGTGACTATGTGTGATACTATCTCTGTGACACTAGTAAAGAAGTTTTTACAAGTTTTGTTTCCCCTGAACATGAGAAATCAACTTTCAGAAAAGGATGATGTTAAATATTTTGTCTTGAACACCGTGATGACAGAAATATTTTTGCACTCAAGCAAATGGATCTGCCCTCCTCCTGTTTTATTTGAGAAAGTTTTAGAATTTCTGGAAGATTCTCTGCTTGGAAAGGTATGCAATGACACACTTTCTGGTAAGGCAGTCTGGGAGAAGCATTTAATTTCACTTCTTCCTTTTGTTCCAAAACTTGTTTCTCAAGTGGCAGTTGACTGGAAGTCTCGCCTTCTTCAGGCTTTTAGTGAGGCATTCAAGGACTGCAATCCTGTATCCCCTTTAAAATTGGCTTGTATTTCTGTACTGGAGGAGCTGCTAGTTCCTAGACAAGACATGCTGTACCTGGATCCGAGTATTCCCGAGATATTAGACTTTCAGATTACGTGGATAAGAGAGCTTCCTGTGTTGCTTATTCTGCTGGATGATAAAAACCCATACTATTCCCAGGTTGTGCTGCACCTTCTACTTCGCCTGGGACAACGTGCTTTAGTGAACTCTTCCTTTGCATGGGAATATGACAACATCCAATTGTCACTGCAAGAATTTTTTGGCATAAGTCAAGATGATGGAAATGTATTATATGGTCCCTTTTTAAGGCTTCCCAGAGATTCTCAAGAACTCTCTCTTTCCTGCCTCTGTTATATCTCTAATTTGGGTCCACCTTTGCTGAAGTCAATAGCTTACTGTTGCCTATGTCCTGATCTGGAACAATATGTATTATTTCGAATCATAGAGGTCCTGAATTCAGCTTATAAATCTGGGCATATTCAGATTGTTGATCACATTAGTTTCTTGATCACTTTGCTCTCCCGTTTCAGAGTTTTCCCAGAAAATATCGTTCCTGGTAGAGAGAGTGATGTGAATATCTCAAATCGAGGGACTTTTAAGTCACTCAGCCGAATTGTCTGCTCATGCCTGTCACAGATGGGTGATAATACTCTTGTTTTGCAGATGCTAGAGAAAATTATACTCGATCAGATGTCTCAAAATCCTCCTCTAGACAACATTTGTGCTATGCTTAGGACGCTTATTACACTGGACTCTAAAACCACAATAATTTCCCAAAGAGCTTTTATAAGCCTTGGCAATATCCTTCCACGGTATCTGATTGACGTTGTGCAGTGCATTGTTGAAGATGACAAGAAGACCACCGTTTCCATTTCTTCAAGTTCATGTCGTTATTATCTCATCCCTTGCTTTGTCTTGTTTGATAAAAGTCACAAACTTCTGAATCTTGTATTGAATACGTTGGGGTCATGGATAACTGAAAGTAGTTTGCTGCATGTAACTGGTGATCTTACCCACTACGCAACTGACATTTCAAGTATGGTAGATGCAGTCGTTTTCCTGCTTCAATTGATGCATATGGATGACAAAATCTGTCAAATCATATCTTCGTTCAAGGCAGAGATTGACTATATCATGGAAGGCATCAGGTTATTACAGTCATCAGAGGAAATCAGCATGACGATTGAAGAAAAGCACAAGGTGCAATGTGCACTTGGTAGACTACAGAATGTAATAAATACACTGCACGGTGAGATGCAGTCAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

888

Amino Acids

100.59

Weight (kDa)

7.19

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ipi1_N PF12333 146 - 209 1.7e-07 Rix1 complex component involved in 60S ribosome maturation
TPR_TEX10 PF25781 497 - 831 5.4e-13 TEX10-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1860, 2183
AasI GACNNNNNNGTC 1 cut(s) 1993
Acc36I ACCTGC 1 cut(s) 772
AccI GTMKAC 1 cut(s) 2614
AccIII TCCGGA 1 cut(s) 850
AciI CCGC 2 cut(s) 89, 601
AclI AACGTT 1 cut(s) 200
AclWI GGATC 4 cut(s) 816, 1166, 1448, 1461
AcsI RAATTY 5 cut(s) 515, 935, 1196, 1649, 1849
AcuI CTGAAG 3 cut(s) 200, 1325, 1796
AdeI CACNNNGTG 1 cut(s) 2596
AfaI GTAC 3 cut(s) 762, 1410, 1448
AfiI CCNNNNNNNGG 4 cut(s) 986, 1342, 1614, 1701
AhdI GACNNNNNGTC 1 cut(s) 1327
AhlI ACTAGT 1 cut(s) 1030
AjnI CCWGG 6 cut(s) 409, 657, 1449, 1551, 1578, 1948
AjuI GAANNNNNNNTTGG 4 cut(s) 831, 863, 1288, 1320
Alw21I GWGCWC 1 cut(s) 2608
Alw26I GTCTC 2 cut(s) 1335, 2094
Alw44I GTGCAC 1 cut(s) 2604
AlwI GGATC 4 cut(s) 816, 1166, 1448, 1461
Ama87I CYCGRG 1 cut(s) 1466
Aor13HI TCCGGA 1 cut(s) 850
AoxI GGCC 1 cut(s) 456
ApaLI GTGCAC 1 cut(s) 2604
ApeKI GCWGC 5 cut(s) 31, 334, 1420, 1561, 2386
ApoI RAATTY 5 cut(s) 515, 935, 1196, 1649, 1849
Asp700I GAANNNNTTC 2 cut(s) 213, 573
AspS9I GGNCC 3 cut(s) 1691, 1763, 1843
AsuHPI GGTGA 3 cut(s) 2048, 2411, 2657
AsuII TTCGAA 1 cut(s) 1831
AvaI CYCGRG 1 cut(s) 1466
AvaII GGWCC 3 cut(s) 1691, 1763, 1843
AxyI CCTNAGG 1 cut(s) 284
BaeGI GKGCMC 1 cut(s) 2608
BamHI GGATCC 1 cut(s) 1453
BbsI GAAGAC 1 cut(s) 2258
Bbv12I GWGCWC 1 cut(s) 2608
BbvI GCAGC 5 cut(s) 43, 321, 1407, 1548, 2373
BccI CCATC 5 cut(s) 448, 499, 549, 1667, 2026
BceAI ACGGC 1 cut(s) 638
BcgI CGANNNNNNTGC 2 cut(s) 1995, 2029
BciT130I CCWGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
BciVI GTATCC 3 cut(s) 300, 729, 1390
BclI TGATCA 2 cut(s) 1885, 1902
BcoDI GTCTC 2 cut(s) 1335, 2094
BcuI ACTAGT 1 cut(s) 1030
BfaI CTAG 8 cut(s) 824, 968, 1031, 1424, 1431, 2063, 2105, 2662
BfmI CTRYAG 1 cut(s) 2618
BfuAI ACCTGC 1 cut(s) 772
BfuI GTATCC 3 cut(s) 300, 729, 1390
BisI GCNGC 6 cut(s) 32, 89, 335, 1421, 1562, 2387
BlsI GCNGC 6 cut(s) 33, 90, 336, 1422, 1563, 2388
Bme1390I CCNGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
Bme18I GGWCC 3 cut(s) 1691, 1763, 1843
BmeRI GACNNNNNGTC 1 cut(s) 1327
BmeT110I CYCGRG 1 cut(s) 1466
BmgT120I GGNCC 3 cut(s) 1691, 1763, 1843
BmiI GGNNCC 5 cut(s) 18, 608, 1455, 1693, 1764
BmrFI CCNGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
BmsI GCATC 8 cut(s) 54, 167, 244, 2049, 2431, 2457, 2547, 2640
BpiI GAAGAC 1 cut(s) 2258
BplI GAGNNNNNCTC 2 cut(s) 685, 717
BpmI CTGGAG 1 cut(s) 1433
Bpu10I CCTNAGC 1 cut(s) 2126
Bpu14I TTCGAA 1 cut(s) 1831
BpuEI CTTGAG 5 cut(s) 623, 969, 1132, 1293, 1704
Bsa29I ATCGAT 1 cut(s) 492
BsaAI YACGTR 1 cut(s) 1491
BsaJI CCNNGG 5 cut(s) 12, 1551, 1579, 2188, 2204
BsaWI WCCGGW 1 cut(s) 850
Bsc4I CCNNNNNNNGG 4 cut(s) 986, 1342, 1614, 1701
Bse1I ACTGG 5 cut(s) 868, 1328, 1416, 2148, 2401
Bse21I CCTNAGG 1 cut(s) 284
Bse3DI GCAATG 3 cut(s) 480, 1237, 2606
BseAI TCCGGA 1 cut(s) 850
BseBI CCWGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
BseCI ATCGAT 1 cut(s) 492
BseDI CCNNGG 5 cut(s) 12, 1551, 1579, 2188, 2204
BseGI GGATG 8 cut(s) 541, 785, 792, 1099, 1534, 1629, 2295, 2482
BseLI CCNNNNNNNGG 4 cut(s) 986, 1342, 1614, 1701
BseMI GCAATG 3 cut(s) 480, 1237, 2606
BseMII CTCAG 1 cut(s) 2014
BseNI ACTGG 5 cut(s) 868, 1328, 1416, 2148, 2401
BseRI GAGGAG 3 cut(s) 1158, 1430, 2091
BseSI GKGCMC 1 cut(s) 2608
BseXI GCAGC 5 cut(s) 43, 321, 1407, 1548, 2373
BsgI GTGCAG 3 cut(s) 1547, 2246, 2624
BshFI GGCC 1 cut(s) 458
BshVI ATCGAT 1 cut(s) 492
BsiHKAI GWGCWC 1 cut(s) 2608
BsiHKCI CYCGRG 1 cut(s) 1466
BsiSI CCGG 2 cut(s) 20, 851
BslFI GGGAC 4 cut(s) 800, 1596, 1677, 1999
BslI CCNNNNNNNGG 4 cut(s) 986, 1342, 1614, 1701
BsmAI GTCTC 2 cut(s) 1335, 2094
BsmFI GGGAC 4 cut(s) 800, 1596, 1677, 1999
BsmI GAATGC 2 cut(s) 568, 1358
BsnI GGCC 1 cut(s) 458
BsoBI CYCGRG 1 cut(s) 1466
Bsp119I TTCGAA 1 cut(s) 1831
Bsp1286I GDGCHC 1 cut(s) 2608
Bsp13I TCCGGA 1 cut(s) 850
Bsp143I GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
BspACI CCGC 2 cut(s) 89, 601
BspANI GGCC 1 cut(s) 458
BspCNI CTCAG 1 cut(s) 2013
BspDI ATCGAT 1 cut(s) 492
BspEI TCCGGA 1 cut(s) 850
BspLI GGNNCC 5 cut(s) 18, 608, 1455, 1693, 1764
BspMI ACCTGC 1 cut(s) 772
BspPI GGATC 4 cut(s) 816, 1166, 1448, 1461
BspT104I TTCGAA 1 cut(s) 1831
BsrDI GCAATG 3 cut(s) 480, 1237, 2606
BsrI ACTGG 5 cut(s) 868, 1328, 1416, 2148, 2401
BssECI CCNNGG 5 cut(s) 12, 1551, 1579, 2188, 2204
BssMI GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
BssT1I CCWWGG 2 cut(s) 12, 2188
Bst2UI CCWGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
Bst4CI ACNGT 6 cut(s) 1123, 1793, 2208, 2260, 2553, 2645
Bst6I CTCTTC 3 cut(s) 291, 876, 1609
BstAPI GCANNNNNTGC 2 cut(s) 773, 2596
BstBAI YACGTR 1 cut(s) 1491
BstBI TTCGAA 1 cut(s) 1831
BstC8I GCNNGC 5 cut(s) 7, 528, 635, 703, 744
BstDEI CTNAG 3 cut(s) 284, 2000, 2126
BstDSI CCRYGG 1 cut(s) 2204
BstENI CCTNNNNNAGG 3 cut(s) 984, 1340, 1699
BstF5I GGATG 8 cut(s) 541, 785, 792, 1099, 1534, 1629, 2295, 2482
BstKTI GATC 8 cut(s) 811, 1161, 1456, 1810, 1888, 1905, 2083, 2404
BstMAI GTCTC 2 cut(s) 1335, 2094
BstMBI GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
BstMWI GCNNNNNNNGC 6 cut(s) 37, 176, 773, 1522, 2131, 2596
BstNI CCWGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
BstNSI RCATGY 3 cut(s) 746, 1444, 2393
BstSCI CCNGG 6 cut(s) 409, 657, 1449, 1551, 1578, 1948
BstSFI CTRYAG 1 cut(s) 2618
BstSLI GKGCMC 1 cut(s) 2608
BstV1I GCAGC 5 cut(s) 43, 321, 1407, 1548, 2373
BstV2I GAAGAC 1 cut(s) 2258
BstX2I RGATCY 3 cut(s) 808, 1158, 1453
BstYI RGATCY 3 cut(s) 808, 1158, 1453
Bsu15I ATCGAT 1 cut(s) 492
Bsu36I CCTNAGG 1 cut(s) 284
BsuI GTATCC 3 cut(s) 300, 729, 1390
BsuRI GGCC 1 cut(s) 458
BsuTUI ATCGAT 1 cut(s) 492
BtgI CCRYGG 1 cut(s) 2204
BtgZI GCGATG 1 cut(s) 366
BtsCI GGATG 8 cut(s) 541, 785, 792, 1099, 1534, 1629, 2295, 2482
BtsI GCAGTG 4 cut(s) 186, 1640, 2234, 2636
BtsIMutI CAGTG 5 cut(s) 186, 1640, 2141, 2234, 2636
BveI ACCTGC 1 cut(s) 772
Cac8I GCNNGC 5 cut(s) 7, 528, 635, 703, 744
Cfr13I GGNCC 3 cut(s) 1691, 1763, 1843
ClaI ATCGAT 1 cut(s) 492
CseI GACGC 1 cut(s) 2140
Csp6I GTAC 3 cut(s) 761, 1409, 1447
CviQI GTAC 3 cut(s) 761, 1409, 1447
DdeI CTNAG 3 cut(s) 284, 2000, 2126
DpnI GATC 8 cut(s) 810, 1160, 1455, 1809, 1887, 1904, 2082, 2403
DpnII GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
DraI TTTAAA 1 cut(s) 1389
DraIII CACNNNGTG 1 cut(s) 2596
DrdI GACNNNNNNGTC 1 cut(s) 1993
DriI GACNNNNNGTC 1 cut(s) 1327
DseDI GACNNNNNNGTC 1 cut(s) 1993
Eam1104I CTCTTC 3 cut(s) 291, 876, 1609
Eam1105I GACNNNNNGTC 1 cut(s) 1327
EarI CTCTTC 3 cut(s) 291, 876, 1609
Eco130I CCWWGG 2 cut(s) 12, 2188
Eco47I GGWCC 3 cut(s) 1691, 1763, 1843
Eco57I CTGAAG 3 cut(s) 200, 1325, 1796
Eco81I CCTNAGG 1 cut(s) 284
Eco88I CYCGRG 1 cut(s) 1466
EcoNI CCTNNNNNAGG 3 cut(s) 984, 1340, 1699
EcoO109I RGGNCCY 1 cut(s) 1843
EcoRI GAATTC 1 cut(s) 1849
EcoRII CCWGG 6 cut(s) 409, 657, 1449, 1551, 1578, 1948
EcoT14I CCWWGG 2 cut(s) 12, 2188
EcoT22I ATGCAT 2 cut(s) 259, 2472
ErhI CCWWGG 2 cut(s) 12, 2188
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FaqI GGGAC 4 cut(s) 800, 1596, 1677, 1999
FauNDI CATATG 1 cut(s) 2472
FbaI TGATCA 2 cut(s) 1885, 1902
FblI GTMKAC 1 cut(s) 2614
Fnu4HI GCNGC 6 cut(s) 32, 89, 335, 1421, 1562, 2387
FokI GGATG 8 cut(s) 528, 779, 792, 1106, 1541, 1616, 2282, 2489
Fsp4HI GCNGC 6 cut(s) 32, 89, 335, 1421, 1562, 2387
FspBI CTAG 8 cut(s) 824, 968, 1031, 1424, 1431, 2063, 2105, 2662
GluI GCNGC 6 cut(s) 32, 89, 335, 1421, 1562, 2387
GsuI CTGGAG 1 cut(s) 1433
HaeIII GGCC 1 cut(s) 458
HapII CCGG 2 cut(s) 20, 851
HgaI GACGC 1 cut(s) 2140
HincII GTYRAC 1 cut(s) 1321
HindII GTYRAC 1 cut(s) 1321
HindIII AAGCTT 1 cut(s) 583
HinfI GANTC 7 cut(s) 574, 971, 1208, 1715, 1833, 2147, 2338
HpaII CCGG 2 cut(s) 20, 851
HphI GGTGA 3 cut(s) 2048, 2411, 2657
Hpy166II GTNNAC 8 cut(s) 184, 341, 965, 1321, 1600, 1766, 2606, 2615
Hpy8I GTNNAC 8 cut(s) 184, 341, 965, 1321, 1600, 1766, 2606, 2615
HpyAV CCTTC 9 cut(s) 160, 265, 558, 562, 990, 1346, 1577, 2210, 2528
HpyCH4III ACNGT 6 cut(s) 1123, 1793, 2208, 2260, 2553, 2645
HpyCH4IV ACGT 5 cut(s) 200, 1490, 1588, 2220, 2354
HpyF10VI GCNNNNNNNGC 6 cut(s) 37, 176, 773, 1522, 2131, 2596
HpyF3I CTNAG 3 cut(s) 284, 2000, 2126
HpySE526I ACGT 5 cut(s) 200, 1490, 1588, 2220, 2354
Kpn2I TCCGGA 1 cut(s) 850
Ksp22I TGATCA 2 cut(s) 1885, 1902
Kzo9I GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
LmnI GCTCC 4 cut(s) 14, 22, 523, 1417
Lsp1109I GCAGC 5 cut(s) 43, 321, 1407, 1548, 2373
LweI GCATC 8 cut(s) 54, 167, 244, 2049, 2431, 2457, 2547, 2640
MaeI CTAG 8 cut(s) 824, 968, 1031, 1424, 1431, 2063, 2105, 2662
MaeII ACGT 5 cut(s) 200, 1490, 1588, 2220, 2354
MaeIII GTNAC 8 cut(s) 686, 1000, 1024, 1638, 1995, 2025, 2324, 2392
MalI GATC 8 cut(s) 810, 1160, 1455, 1809, 1887, 1904, 2082, 2403
MboI GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
MfeI CAATTG 3 cut(s) 132, 1634, 2462
MflI RGATCY 3 cut(s) 808, 1158, 1453
MhlI GDGCHC 1 cut(s) 2608
MlyI GAGTC 1 cut(s) 2141
Mph1103I ATGCAT 2 cut(s) 259, 2472
MroI TCCGGA 1 cut(s) 850
MroXI GAANNNNTTC 2 cut(s) 213, 573
MslI CAYNNNNRTG 3 cut(s) 315, 1124, 2475
MspI CCGG 2 cut(s) 20, 851
MspR9I CCNGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
MunI CAATTG 3 cut(s) 132, 1634, 2462
Mva1269I GAATGC 2 cut(s) 568, 1358
MvaI CCWGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
MwoI GCNNNNNNNGC 6 cut(s) 37, 176, 773, 1522, 2131, 2596
NdeI CATATG 1 cut(s) 2472
NdeII GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
NlaIV GGNNCC 5 cut(s) 18, 608, 1455, 1693, 1764
NmuCI GTSAC 6 cut(s) 1000, 1024, 1638, 1995, 2025, 2324
NsiI ATGCAT 2 cut(s) 259, 2472
NspI RCATGY 3 cut(s) 746, 1444, 2393
NspV TTCGAA 1 cut(s) 1831
PaeI GCATGC 1 cut(s) 746
PctI GAATGC 2 cut(s) 568, 1358
PdmI GAANNNNTTC 2 cut(s) 213, 573
PfeI GAWTC 6 cut(s) 574, 971, 1208, 1715, 1833, 2338
PfoI TCCNGGA 1 cut(s) 657
PkrI GCNGC 6 cut(s) 33, 90, 336, 1422, 1563, 2388
PleI GAGTC 1 cut(s) 2141
PpsI GAGTC 1 cut(s) 2141
Ppu21I YACGTR 1 cut(s) 1491
PpuMI RGGWCCY 1 cut(s) 1843
PsiI TTATAA 2 cut(s) 1860, 2183
Psp1406I AACGTT 1 cut(s) 200
Psp5II RGGWCCY 1 cut(s) 1843
Psp6I CCWGG 6 cut(s) 409, 657, 1449, 1551, 1578, 1948
PspGI CCWGG 6 cut(s) 409, 657, 1449, 1551, 1578, 1948
PspN4I GGNNCC 5 cut(s) 18, 608, 1455, 1693, 1764
PspPI GGNCC 3 cut(s) 1691, 1763, 1843
PspPPI RGGWCCY 1 cut(s) 1843
PsuI RGATCY 3 cut(s) 808, 1158, 1453
RsaI GTAC 3 cut(s) 762, 1410, 1448
RsaNI GTAC 3 cut(s) 761, 1409, 1447
RseI CAYNNNNRTG 3 cut(s) 315, 1124, 2475
SatI GCNGC 6 cut(s) 32, 89, 335, 1421, 1562, 2387
Sau3AI GATC 8 cut(s) 808, 1158, 1453, 1807, 1885, 1902, 2080, 2401
Sau96I GGNCC 3 cut(s) 1691, 1763, 1843
SchI GAGTC 1 cut(s) 2141
ScrFI CCNGG 6 cut(s) 411, 659, 1451, 1553, 1580, 1950
SduI GDGCHC 1 cut(s) 2608
SfaNI GCATC 8 cut(s) 54, 167, 244, 2049, 2431, 2457, 2547, 2640
SfcI CTRYAG 1 cut(s) 2618
SfuI TTCGAA 1 cut(s) 1831
SinI GGWCC 3 cut(s) 1691, 1763, 1843
SmiMI CAYNNNNRTG 3 cut(s) 315, 1124, 2475
SmlI CTYRAG 5 cut(s) 638, 984, 1147, 1308, 1719
SmoI CTYRAG 5 cut(s) 638, 984, 1147, 1308, 1719
SpeI ACTAGT 1 cut(s) 1030
SphI GCATGC 1 cut(s) 746
SsiI CCGC 2 cut(s) 89, 601
SspI AATATT 2 cut(s) 1106, 1137
SspMI CTAG 8 cut(s) 824, 968, 1031, 1424, 1431, 2063, 2105, 2662
StyD4I CCNGG 6 cut(s) 409, 657, 1449, 1551, 1578, 1948
StyI CCWWGG 2 cut(s) 12, 2188
TaaI ACNGT 6 cut(s) 1123, 1793, 2208, 2260, 2553, 2645
TaiI ACGT 5 cut(s) 203, 1493, 1591, 2223, 2357
TaqI TCGA 6 cut(s) 48, 370, 492, 1831, 1981, 2079
TatI WGTACW 1 cut(s) 1408
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 6 cut(s) 574, 971, 1208, 1715, 1833, 2338
TscAI CASTG 5 cut(s) 186, 1647, 2148, 2234, 2643
TseFI GTSAC 6 cut(s) 1000, 1024, 1638, 1995, 2025, 2324
TseI GCWGC 5 cut(s) 31, 334, 1420, 1561, 2386
Tsp45I GTSAC 6 cut(s) 1000, 1024, 1638, 1995, 2025, 2324
TspDTI ATGAA 2 cut(s) 284, 2268
TspRI CASTG 5 cut(s) 186, 1647, 2148, 2234, 2643
VneI GTGCAC 1 cut(s) 2604
VpaK11BI GGWCC 3 cut(s) 1691, 1763, 1843
XagI CCTNNNNNAGG 3 cut(s) 984, 1340, 1699
XapI RAATTY 5 cut(s) 515, 935, 1196, 1649, 1849
XbaI TCTAGA 1 cut(s) 2104
XceI RCATGY 3 cut(s) 746, 1444, 2393
XmiI GTMKAC 1 cut(s) 2614
XmnI GAANNNNTTC 2 cut(s) 213, 573
XspI CTAG 8 cut(s) 824, 968, 1031, 1424, 1431, 2063, 2105, 2662
Zsp2I ATGCAT 2 cut(s) 259, 2472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.