Rh1AG114000

Testis-expressed sequence 10 protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
19640088 .. 19642092
2005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG114000.1

Sequence Viewer

Length: 582 bp
ATGGCAAGCTCTAAAAATGCGTCAAAGAAGAAGCAAAAGCACGGTATCGACTTCAAGAAAATAAAGCGAAAGATTGGCAGAAAATTGCTACCGGCACAGAATGCTACAAATACTGAAATTAAATCTAAAGCAATTGTCCTCCCCGAGCAGAGTGTGGCATCCGAGAAGGCAGGATTAGCAGTGAACAAGAAAGGCTTGACTATGAAAGAGCTTCTTCAACAAACATCTCATTACAGCTCAAAAGTCCTTAAAGACTCATTGTTGGGAATTAAGGATTCATTCCTTAAGCATCCAGAAGAGTTGAGGTCGCATAAGTACGCTGTTATTGAAAAACTGCGTGAACGCATTGGTGATGATGATAGACTAGTTCGAGAAACGCTGTATCAACTTTTCAAGTCAGTGATTTTCCCTGGATTTAAGGAGGATAATCAAGAGCTTTTTGTTTCCTTGATGATGGCCTATATATTTAATTCAATGACACATTTAGCAATTGATGTTCGACTGATGGCTTTCAAATTTTTGGAGCTTGGTGTTGAGGTTTCGATTAATTGGATGCATTACAAACTGAACAAAAACCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

193

Amino Acids

22.2

Weight (kDa)

9.83

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 515
AfaI GTAC 1 cut(s) 317
AflII CTTAAG 1 cut(s) 284
AgsI TTSAA 6 cut(s) 55, 218, 329, 394, 474, 514
AhlI ACTAGT 1 cut(s) 364
AjnI CCWGG 1 cut(s) 409
AluBI AGCT 5 cut(s) 9, 211, 237, 436, 526
AluI AGCT 5 cut(s) 9, 211, 237, 436, 526
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 1 cut(s) 456
ApoI RAATTY 1 cut(s) 515
AseI ATTAAT 1 cut(s) 546
AsuHPI GGTGA 1 cut(s) 362
AvaI CYCGRG 1 cut(s) 143
BccI CCATC 2 cut(s) 448, 499
BciT130I CCWGG 1 cut(s) 411
BcuI ACTAGT 1 cut(s) 364
BfaI CTAG 1 cut(s) 365
BfrI CTTAAG 1 cut(s) 284
Bme1390I CCNGG 1 cut(s) 411
BmeT110I CYCGRG 1 cut(s) 143
BmrFI CCNGG 1 cut(s) 411
BmsI GCATC 3 cut(s) 167, 298, 543
BsaJI CCNNGG 1 cut(s) 409
Bse118I RCCGGY 1 cut(s) 91
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 1 cut(s) 409
BseGI GGATG 3 cut(s) 158, 289, 558
BshFI GGCC 1 cut(s) 458
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 1 cut(s) 92
BsmI GAATGC 1 cut(s) 106
BsnI GGCC 1 cut(s) 458
BsoBI CYCGRG 1 cut(s) 143
BspANI GGCC 1 cut(s) 458
BspTI CTTAAG 1 cut(s) 284
BsrFI RCCGGY 1 cut(s) 91
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 1 cut(s) 409
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 1 cut(s) 44
Bst6I CTCTTC 1 cut(s) 291
BstAFI CTTAAG 1 cut(s) 284
BstAPI GCANNNNNTGC 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 7
BstF5I GGATG 3 cut(s) 158, 289, 558
BstMWI GCNNNNNNNGC 2 cut(s) 101, 176
BstNI CCWGG 1 cut(s) 411
BstSCI CCNGG 1 cut(s) 409
BsuRI GGCC 1 cut(s) 458
BtsCI GGATG 3 cut(s) 158, 289, 558
BtsI GCAGTG 1 cut(s) 186
BtsIMutI CAGTG 2 cut(s) 186, 405
Cac8I GCNNGC 1 cut(s) 7
Cfr10I RCCGGY 1 cut(s) 91
CseI GACGC 1 cut(s) 9
Csp6I GTAC 1 cut(s) 316
CviJI RGCY 8 cut(s) 9, 195, 211, 237, 436, 458, 509, 526
CviKI_1 RGCY 8 cut(s) 9, 195, 211, 237, 436, 458, 509, 526
CviQI GTAC 1 cut(s) 316
Eam1104I CTCTTC 1 cut(s) 291
EarI CTCTTC 1 cut(s) 291
Eco88I CYCGRG 1 cut(s) 143
EcoRII CCWGG 1 cut(s) 409
EcoT22I ATGCAT 1 cut(s) 558
FaiI YATR 4 cut(s) 203, 312, 462, 464
FalI AAGNNNNNCTT 4 cut(s) 179, 211, 198, 230
FokI GGATG 3 cut(s) 145, 276, 565
FspBI CTAG 1 cut(s) 365
HaeIII GGCC 1 cut(s) 458
HapII CCGG 1 cut(s) 92
HgaI GACGC 1 cut(s) 9
HinfI GANTC 2 cut(s) 254, 275
HpaII CCGG 1 cut(s) 92
HphI GGTGA 1 cut(s) 362
Hpy166II GTNNAC 2 cut(s) 184, 341
Hpy188I TCNGA 1 cut(s) 163
Hpy188III TCNNGA 4 cut(s) 55, 293, 371, 431
Hpy8I GTNNAC 2 cut(s) 184, 341
HpyAV CCTTC 1 cut(s) 160
HpyCH4III ACNGT 1 cut(s) 44
HpyCH4V TGCA 1 cut(s) 556
HpyF10VI GCNNNNNNNGC 2 cut(s) 101, 176
LmnI GCTCC 1 cut(s) 523
LpnPI CCDG 5 cut(s) 105, 156, 306, 396, 423
LweI GCATC 3 cut(s) 167, 298, 543
MaeI CTAG 1 cut(s) 365
MboII GAAGA 3 cut(s) 40, 206, 308
MfeI CAATTG 2 cut(s) 132, 489
MluCI AATT 8 cut(s) 83, 117, 132, 267, 469, 489, 515, 547
MlyI GAGTC 1 cut(s) 248
MnlI CCTC 4 cut(s) 149, 297, 415, 529
Mph1103I ATGCAT 1 cut(s) 558
MseI TTAA 7 cut(s) 120, 249, 270, 285, 417, 468, 546
MspCI CTTAAG 1 cut(s) 284
MspI CCGG 1 cut(s) 92
MspR9I CCNGG 1 cut(s) 411
MunI CAATTG 2 cut(s) 132, 489
Mva1269I GAATGC 1 cut(s) 106
MvaI CCWGG 1 cut(s) 411
MwoI GCNNNNNNNGC 2 cut(s) 101, 176
NsiI ATGCAT 1 cut(s) 558
PctI GAATGC 1 cut(s) 106
PfeI GAWTC 1 cut(s) 275
PleI GAGTC 1 cut(s) 248
PpsI GAGTC 1 cut(s) 248
PshBI ATTAAT 1 cut(s) 546
Psp6I CCWGG 1 cut(s) 409
PspGI CCWGG 1 cut(s) 409
RsaI GTAC 1 cut(s) 317
RsaNI GTAC 1 cut(s) 316
SaqAI TTAA 7 cut(s) 120, 249, 270, 285, 417, 468, 546
SchI GAGTC 1 cut(s) 248
ScrFI CCNGG 1 cut(s) 411
SetI ASST 7 cut(s) 11, 213, 239, 308, 438, 528, 540
SfaNI GCATC 3 cut(s) 167, 298, 543
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
SpeI ACTAGT 1 cut(s) 364
Sse9I AATT 8 cut(s) 83, 117, 132, 267, 469, 489, 515, 547
SspMI CTAG 1 cut(s) 365
StyD4I CCNGG 1 cut(s) 409
TaaI ACNGT 1 cut(s) 44
TaqI TCGA 4 cut(s) 48, 370, 499, 542
TasI AATT 8 cut(s) 83, 117, 132, 267, 469, 489, 515, 547
TfiI GAWTC 1 cut(s) 275
Tru1I TTAA 7 cut(s) 120, 249, 270, 285, 417, 468, 546
Tru9I TTAA 7 cut(s) 120, 249, 270, 285, 417, 468, 546
TscAI CASTG 2 cut(s) 186, 405
TspDTI ATGAA 2 cut(s) 218, 267
TspRI CASTG 2 cut(s) 186, 405
Vha464I CTTAAG 1 cut(s) 284
VspI ATTAAT 1 cut(s) 546
XapI RAATTY 1 cut(s) 515
XspI CTAG 1 cut(s) 365
Zsp2I ATGCAT 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.