Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000968

Physical Location & Seq

Genomic Coordinates Reverse (-)

31699717 .. 31708959

Gene Structure 9243 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g40140.t14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGATGAGCGTAATTCTCCGGCGGTCACCCACAATCGCCGCCACGCGCGCCGTCGCCGCCATCGAAACCCTACTGATCAACCGCCTCTCATTTCCTTCCCTCCCGGCGAATGGCGATCTCGGCGCCGGCGAGGCTAAGCTCTCATGGTTCCAAGTTCGGGACTTTCATGCGAAACCTGGGCCGTTGAGCTTCCGGGCATCGCCGACGACTATGTTCGGCTCCCAGGTGGCTTTGGAGGATGACTACGACGTGTCGTCTAAACCGAGCGGCGACGAGGGGCTCGAGATTTCGAGGCTAGGGATTGATAAGGAGATTGTGTCTGCTTTGGCCAAGAAGGGGATCACTAAGCTTTTCCCCATTCAGAAAGCTGTGTTGGAGCCTGCAATGCAAGGACGTGATATGATTGGTCGTGCTAGAACCGGAACCGGGAAGACTCTTGCGTTTGGGATTCCGATATTGGATAAGATCATTCGATACAATGCCAAACATGGGCGTGGGAGGAATCCTTTGGCTTTGGTTATGGCGCCGACGAGAGAGCTTGCGAAGCAGGTTGACAAGGAGTTCCAAGAGGCAGCTCCTGGCTTGGATACTATTTGTTTGTATGGTGGTACGCCCATTGGGAGTCAGATCGGGCAGCTTGGCTATGGTACTGATGTGGCTGTGGGCACACCTGGGCGAATTATTGATCTGATTGATAGGGGTGCTTTGAATTTATCTGAAGTTCAGTTCATTGTTCTTGACGAAGCCGATGAGATGCTTAAAGTGGGATTTCAGGAGGCAGTCGAGCAAATCTTGAGGAGCGTACCAAAGCAACGTCAAACCTTGTTGTTCTCTGCAACAATGCCGCCTTTCATTAGAAGTCTTACTCAGAAGTACCTAAATAATCCAGCAGTTATTGATCTTGTTGGGGACAATGATCAGAAATTAGCAGATGGAATTACCCTGTATTCTATTGCTGCAGACTCATATGGAAAAGGATCGATCCTTGGACCTCTTATAACAGAACATGCAAAAGGAGGGAAGTGCATTATTTTTGTTGGGAGAAAACGTGATGCTGATAATTTGGCATATGCCCTGTCAAGAAGCCATAAATGTGAGGCTTTGCATGGGGATATTTCACAACAGCACAGGGAAAGGGCACTATCAGGTTTTCGAGAAGGGCGTTTCAATGTTTTAGTTGCCACTGATGTTGCCGCTCGTGGGCTTGATGTACCCAATGTTGATCTGGTGATACATTACGAGCTCCCAAATAATTCAGAAATATTTGTTCATCGGTCAGGCAGAACAGGCCGTGCTGGGAAGAAAGGAAGTGCTATTCTTATTTACTCACAGGATCAAACCAGGAATGTCAGGCTGATTGAAAGAGATGTTGGATGCAGATTTACTGAGCTTCCCCACATTGCTGTTGACAGTGGAAGTGCAGACATGTTTGACATAGGAAGCGGTGGTCGATTTAATCGTTTTGGTGGTCCAGGGGGAGGGGGACCTGGATTTGGACGTTCTGGACCTGGGGGTAGATATAATGGGCCTAATTCAGGTCGTTTTGGTTCCTTTGGTGATTCTGGTCAATCTAGCACTGGTCGAGGTGGAAACTTTGGCAATTCAGGTTTCGGTCGCTCAGGTGGTTTTGGGAATTCCGACCGTTCAGGTGGTTTTGGGAATTTCGACCGTTCAGGTGGTTTCGGAAGTTCTGATCGTTCAAGTGGTTTTGGAAGTTCTGGCCGTTCAAGTGGTTTTGGAAGTTCTGACCGTTCTGGTGGTTTTGGTAGTTCTGAACGTTCAGGTGGTTTTGGAGGAGGGTTTGGTAGTTCGGATCGTTCAGGTGGATTCAGAGATCGTTCCGGTGGTTCTAGGAACTATGGTTTAGATCGCCAAAGTGGATTTGATGACAACAATTCTAGCCATTTTGCAGATGATCAAGATGCAGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010467 GO:0010501 GO:0016032 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018995 GO:0019034 GO:0019058 GO:0019079 GO:0030312 GO:0031974 GO:0031981 GO:0033643 GO:0033646 GO:0033647 GO:0033648 GO:0034641 GO:0039694 GO:0042025 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043656 GO:0043657 GO:0044094 GO:0044215 GO:0044216 GO:0044217 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

645

Amino Acids

68.24

Weight (kDa)

9.16

Isoelectric Point (pI)

41.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	119 - 287	4.3e-45	DEAD/DEAH box helicase
Helicase_C	PF00271	327 - 433	6.7e-33	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22310 AT3G22310 AT3G22330
fragaria_vesca	FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140
malus_domestica	MD09G1134900.v1.1 MD17G1123900.v1.1
prunus_persica	Prupe.3G191800_v2.0.a1 Prupe.3G191800_v2.0.a1
pyrus_communis	pycom09g05600 pycom17g11530
rosa_chinensis	RchiOBHm_Chr2g0154771 RchiOBHm_Chr2g0154851 RchiOBHm_Chr2g0155131
rosa_laevigata	RLG00000020802 RLG00000020805 RLG00000020809 RLG00000020814 RLG00000020820
rosa_multiflora	Rmu_sc0001027.1_g000001 Rmu_sc0002048.1_g000007 Rmu_sc0002048.1_g000019 Rmu_sc0002048.1_g000035 Rmu_sc0004976.1_g000007
rosa_roxburghii	Rroxscaffold_2G00093940 Rroxscaffold_2G00094090
rosa_rugosa	Rorug02G0444900.1 Rorug02G0445000 Rorug02G0445500 Rorug02G0445600
rosa_samantha	Rh2AG510600 Rh2AG511000 Rh2AG511200 Rh2AG511700 Rh2BG521500 Rh2BG521700 Rh2BG522200 Rh2BG522500 Rh2CG495800 Rh2CG496100 Rh2CG496300 Rh2CG496700 Rh2DG531600 Rh2DG531900 Rh2DG532200
rosa_wichuraiana	Rw2G042000 Rw2G042030 Rw2G042040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	998
Acc36I	ACCTGC	1 cut(s)	538
AccB1I	GGYRCC	2 cut(s)	122, 523
AccBSI	CCGCTC	2 cut(s)	267, 1196
AccII	CGCG	2 cut(s)	46, 48
AciI	CCGC	8 cut(s)	22, 39, 57, 82, 267, 845, 1194, 1443
AclI	AACGTT	1 cut(s)	1777
AclWI	GGATC	5 cut(s)	347, 976, 985, 1341, 1821
AcoI	YGGCCR	2 cut(s)	327, 1720
AcsI	RAATTY	3 cut(s)	709, 1633, 1660
AcuI	CTGAAG	1 cut(s)	738
AcyI	GRCGYC	2 cut(s)	123, 524
AfaI	GTAC	5 cut(s)	610, 649, 804, 875, 1212
AfiI	CCNNNNNNNGG	9 cut(s)	110, 157, 336, 426, 489, 1200, 1478, 1493, 1535
AflIII	ACRYGT	2 cut(s)	249, 1425
AgsI	TTSAA	5 cut(s)	709, 1168, 1361, 1701, 1728
AhdI	GACNNNNNGTC	1 cut(s)	253
AjiI	CACGTC	2 cut(s)	250, 395
AjnI	CCWGG	8 cut(s)	175, 222, 577, 670, 1340, 1471, 1486, 1507
AjuI	GAANNNNNNNTTGG	4 cut(s)	356, 388, 1353, 1385
AluBI	AGCT	9 cut(s)	139, 189, 349, 368, 538, 575, 637, 1243, 1390
AluI	AGCT	9 cut(s)	139, 189, 349, 368, 538, 575, 637, 1243, 1390
Alw21I	GWGCWC	1 cut(s)	1245
AlwI	GGATC	5 cut(s)	347, 976, 985, 1341, 1821
AlwNI	CAGNNNCTG	1 cut(s)	578
Ama87I	CYCGRG	1 cut(s)	281
AoxI	GGCC	5 cut(s)	179, 327, 1288, 1526, 1720
ApeKI	GCWGC	3 cut(s)	572, 634, 956
ApoI	RAATTY	3 cut(s)	709, 1633, 1660
AspLEI	GCGC	4 cut(s)	48, 50, 125, 526
AspS9I	GGNCC	6 cut(s)	179, 989, 1469, 1484, 1505, 1526
AsuC2I	CCSGG	3 cut(s)	104, 194, 427
AsuHPI	GGTGA	3 cut(s)	18, 1240, 1568
AvaI	CYCGRG	1 cut(s)	281
AvaII	GGWCC	4 cut(s)	989, 1469, 1484, 1505
BaeGI	GKGCMC	2 cut(s)	668, 1141
BaeI	ACNNNNGTAYC	2 cut(s)	639, 672
BalI	TGGCCA	1 cut(s)	329
BanI	GGYRCC	2 cut(s)	122, 523
BanII	GRGCYC	2 cut(s)	282, 1245
BauI	CACGAG	1 cut(s)	1197
BbsI	GAAGAC	1 cut(s)	437
Bbv12I	GWGCWC	1 cut(s)	1245
BbvI	GCAGC	3 cut(s)	584, 646, 943
BccI	CCATC	2 cut(s)	68, 926
BceAI	ACGGC	4 cut(s)	35, 166, 1275, 1707
BciT130I	CCWGG	8 cut(s)	177, 224, 579, 672, 1342, 1473, 1488, 1509
BciVI	GTATCC	1 cut(s)	580
BclI	TGATCA	3 cut(s)	75, 916, 1915
BcnI	CCSGG	3 cut(s)	104, 194, 427
BfaI	CTAG	5 cut(s)	296, 414, 1572, 1851, 1899
BfmI	CTRYAG	1 cut(s)	957
BfoI	RGCGCY	2 cut(s)	126, 527
BfuAI	ACCTGC	1 cut(s)	538
BfuI	GTATCC	1 cut(s)	580
BglI	GCCNNNNNGGC	1 cut(s)	131
BisI	GCNGC	8 cut(s)	39, 57, 268, 573, 635, 845, 957, 1194
BlpI	GCTNAGC	1 cut(s)	135
BlsI	GCNGC	8 cut(s)	40, 58, 269, 574, 636, 846, 958, 1195
Bme18I	GGWCC	4 cut(s)	989, 1469, 1484, 1505
BmeRI	GACNNNNNGTC	1 cut(s)	253
BmeT110I	CYCGRG	1 cut(s)	281
BmgBI	CACGTC	2 cut(s)	250, 395
BmgT120I	GGNCC	6 cut(s)	179, 989, 1469, 1484, 1505, 1526
BmiI	GGNNCC	8 cut(s)	124, 149, 220, 378, 424, 525, 1485, 1549
BmsI	GCATC	5 cut(s)	206, 744, 1042, 1364, 1912
BpiI	GAAGAC	1 cut(s)	437
Bpu10I	CCTNAGC	1 cut(s)	1618
Bpu1102I	GCTNAGC	1 cut(s)	135
BpuEI	CTTGAG	1 cut(s)	814
BpuMI	CCSGG	3 cut(s)	104, 194, 427
Bsa29I	ATCGAT	1 cut(s)	980
BsaHI	GRCGYC	2 cut(s)	123, 524
BsaJI	CCNNGG	6 cut(s)	176, 222, 671, 985, 1472, 1508
BsaWI	WCCGGW	2 cut(s)	419, 1841
BsaXI	ACNNNNNCTCC	4 cut(s)	302, 332, 1033, 1063
Bsc4I	CCNNNNNNNGG	9 cut(s)	110, 157, 336, 426, 489, 1200, 1478, 1493, 1535
Bse118I	RCCGGY	1 cut(s)	125
Bse1I	ACTGG	1 cut(s)	1582
Bse3DI	GCAATG	2 cut(s)	390, 1398
BseBI	CCWGG	8 cut(s)	177, 224, 579, 672, 1342, 1473, 1488, 1509
BseCI	ATCGAT	1 cut(s)	980
BseDI	CCNNGG	6 cut(s)	176, 222, 671, 985, 1472, 1508
BseGI	GGATG	2 cut(s)	244, 1379
BseLI	CCNNNNNNNGG	9 cut(s)	110, 157, 336, 426, 489, 1200, 1478, 1493, 1535
BseMI	GCAATG	2 cut(s)	390, 1398
BseMII	CTCAG	3 cut(s)	881, 1377, 1632
BseNI	ACTGG	1 cut(s)	1582
BsePI	GCGCGC	1 cut(s)	46
BseRI	GAGGAG	2 cut(s)	811, 1809
BseSI	GKGCMC	2 cut(s)	668, 1141
BseXI	GCAGC	3 cut(s)	584, 646, 943
BseYI	CCCAGC	1 cut(s)	1295
BsgI	GTGCAG	1 cut(s)	1440
Bsh1236I	CGCG	2 cut(s)	46, 48
Bsh1285I	CGRYCG	3 cut(s)	1615, 1642, 1669
BshFI	GGCC	5 cut(s)	181, 329, 1290, 1528, 1722
BshNI	GGYRCC	2 cut(s)	122, 523
BshVI	ATCGAT	1 cut(s)	980
BsiEI	CGRYCG	3 cut(s)	1615, 1642, 1669
BsiHKAI	GWGCWC	1 cut(s)	1245
BsiHKCI	CYCGRG	1 cut(s)	281
BsiSI	CCGG	7 cut(s)	19, 104, 126, 193, 420, 426, 1842
BslFI	GGGAC	3 cut(s)	173, 923, 1497
BslI	CCNNNNNNNGG	9 cut(s)	110, 157, 336, 426, 489, 1200, 1478, 1493, 1535
BsmFI	GGGAC	3 cut(s)	173, 923, 1497
BsnI	GGCC	5 cut(s)	181, 329, 1290, 1528, 1722
BsoBI	CYCGRG	1 cut(s)	281
Bsp1286I	GDGCHC	4 cut(s)	282, 668, 1141, 1245
Bsp1720I	GCTNAGC	1 cut(s)	135
BspACI	CCGC	8 cut(s)	22, 39, 57, 82, 267, 845, 1194, 1443
BspANI	GGCC	5 cut(s)	181, 329, 1290, 1528, 1722
BspCNI	CTCAG	3 cut(s)	880, 1378, 1631
BspDI	ATCGAT	1 cut(s)	980
BspFNI	CGCG	2 cut(s)	46, 48
BspLI	GGNNCC	8 cut(s)	124, 149, 220, 378, 424, 525, 1485, 1549
BspMAI	CTGCAG	1 cut(s)	961
BspMI	ACCTGC	1 cut(s)	538
BspPI	GGATC	5 cut(s)	347, 976, 985, 1341, 1821
BspT107I	GGYRCC	2 cut(s)	122, 523
BsrBI	CCGCTC	2 cut(s)	267, 1196
BsrDI	GCAATG	2 cut(s)	390, 1398
BsrFI	RCCGGY	1 cut(s)	125
BsrI	ACTGG	1 cut(s)	1582
BssAI	RCCGGY	1 cut(s)	125
BssECI	CCNNGG	6 cut(s)	176, 222, 671, 985, 1472, 1508
BssHII	GCGCGC	1 cut(s)	46
BssNI	GRCGYC	2 cut(s)	123, 524
BssSI	CACGAG	1 cut(s)	1197
BssT1I	CCWWGG	1 cut(s)	985
Bst2BI	CACGAG	1 cut(s)	1197
Bst2UI	CCWGG	8 cut(s)	177, 224, 579, 672, 1342, 1473, 1488, 1509
Bst4CI	ACNGT	4 cut(s)	1412, 1643, 1670, 1751
BstACI	GRCGYC	2 cut(s)	123, 524
BstC8I	GCNNGC	4 cut(s)	48, 127, 381, 540
BstDEI	CTNAG	5 cut(s)	135, 345, 867, 1386, 1618
BstEII	GGTNACC	1 cut(s)	24
BstENI	CCTNNNNNAGG	1 cut(s)	1533
BstF5I	GGATG	2 cut(s)	244, 1379
BstFNI	CGCG	2 cut(s)	46, 48
BstH2I	RGCGCY	2 cut(s)	126, 527
BstHHI	GCGC	4 cut(s)	48, 50, 125, 526
BstMCI	CGRYCG	3 cut(s)	1615, 1642, 1669
BstMWI	GCNNNNNNNGC	7 cut(s)	47, 56, 120, 131, 385, 544, 1287
BstNI	CCWGG	8 cut(s)	177, 224, 579, 672, 1342, 1473, 1488, 1509
BstNSI	RCATGY	2 cut(s)	1010, 1429
BstPI	GGTNACC	1 cut(s)	24
BstSFI	CTRYAG	1 cut(s)	957
BstSLI	GKGCMC	2 cut(s)	668, 1141
BstUI	CGCG	2 cut(s)	46, 48
BstV1I	GCAGC	3 cut(s)	584, 646, 943
BstV2I	GAAGAC	1 cut(s)	437
Bsu15I	ATCGAT	1 cut(s)	980
BsuI	GTATCC	1 cut(s)	580
BsuRI	GGCC	5 cut(s)	181, 329, 1290, 1528, 1722
BsuTUI	ATCGAT	1 cut(s)	980
BtgZI	GCGATG	1 cut(s)	183
BtrI	CACGTC	2 cut(s)	250, 395
BtsCI	GGATG	2 cut(s)	244, 1379
BtsIMutI	CAGTG	3 cut(s)	1182, 1417, 1575
BveI	ACCTGC	1 cut(s)	538
Cac8I	GCNNGC	4 cut(s)	48, 127, 381, 540
CaiI	CAGNNNCTG	1 cut(s)	578
CfoI	GCGC	4 cut(s)	48, 50, 125, 526
Cfr10I	RCCGGY	1 cut(s)	125
Cfr13I	GGNCC	6 cut(s)	179, 989, 1469, 1484, 1505, 1526
ClaI	ATCGAT	1 cut(s)	980
Csp6I	GTAC	5 cut(s)	609, 648, 803, 874, 1211
CspCI	CAANNNNNGTGG	2 cut(s)	1171, 1206
CviAII	CATG	6 cut(s)	144, 167, 488, 1007, 1106, 1426
CviQI	GTAC	5 cut(s)	609, 648, 803, 874, 1211
DdeI	CTNAG	5 cut(s)	135, 345, 867, 1386, 1618
DinI	GGCGCC	2 cut(s)	124, 525
DriI	GACNNNNNGTC	1 cut(s)	253
EaeI	YGGCCR	2 cut(s)	327, 1720
Eam1105I	GACNNNNNGTC	1 cut(s)	253
Ecl136II	GAGCTC	1 cut(s)	1243
Eco130I	CCWWGG	1 cut(s)	985
Eco24I	GRGCYC	2 cut(s)	282, 1245
Eco47I	GGWCC	4 cut(s)	989, 1469, 1484, 1505
Eco53kI	GAGCTC	1 cut(s)	1243
Eco57I	CTGAAG	1 cut(s)	738
Eco88I	CYCGRG	1 cut(s)	281
Eco91I	GGTNACC	1 cut(s)	24
EcoICRI	GAGCTC	1 cut(s)	1243
EcoNI	CCTNNNNNAGG	1 cut(s)	1533
EcoO109I	RGGNCCY	1 cut(s)	1484
EcoO65I	GGTNACC	1 cut(s)	24
EcoRI	GAATTC	1 cut(s)	1633
EcoRII	CCWGG	8 cut(s)	175, 222, 577, 670, 1340, 1471, 1486, 1507
EcoT14I	CCWWGG	1 cut(s)	985
EcoT38I	GRGCYC	2 cut(s)	282, 1245
EgeI	GGCGCC	2 cut(s)	124, 525
EheI	GGCGCC	2 cut(s)	124, 525
ErhI	CCWWGG	1 cut(s)	985
FaeI	CATG	6 cut(s)	147, 170, 491, 1010, 1109, 1429
FaqI	GGGAC	3 cut(s)	173, 923, 1497
FatI	CATG	6 cut(s)	143, 166, 487, 1006, 1105, 1425
FauNDI	CATATG	2 cut(s)	967, 1069
FbaI	TGATCA	3 cut(s)	75, 916, 1915
Fnu4HI	GCNGC	8 cut(s)	39, 57, 268, 573, 635, 845, 957, 1194
FokI	GGATG	2 cut(s)	251, 1386
FriOI	GRGCYC	2 cut(s)	282, 1245
Fsp4HI	GCNGC	8 cut(s)	39, 57, 268, 573, 635, 845, 957, 1194
FspBI	CTAG	5 cut(s)	296, 414, 1572, 1851, 1899
GlaI	GCGC	4 cut(s)	47, 49, 124, 525
GluI	GCNGC	8 cut(s)	39, 57, 268, 573, 635, 845, 957, 1194
GsaI	CCCAGC	1 cut(s)	1299
HaeII	RGCGCY	2 cut(s)	126, 527
HaeIII	GGCC	5 cut(s)	181, 329, 1290, 1528, 1722
HapII	CCGG	7 cut(s)	19, 104, 126, 193, 420, 426, 1842
HhaI	GCGC	4 cut(s)	48, 50, 125, 526
Hin1I	GRCGYC	2 cut(s)	123, 524
Hin1II	CATG	6 cut(s)	147, 170, 491, 1010, 1109, 1429
Hin6I	GCGC	4 cut(s)	46, 48, 123, 524
HinP1I	GCGC	4 cut(s)	46, 48, 123, 524
HincII	GTYRAC	2 cut(s)	553, 1408
HindII	GTYRAC	2 cut(s)	553, 1408
HindIII	AAGCTT	1 cut(s)	347
HinfI	GANTC	7 cut(s)	433, 448, 502, 622, 962, 1559, 1827
HpaII	CCGG	7 cut(s)	19, 104, 126, 193, 420, 426, 1842
HphI	GGTGA	3 cut(s)	18, 1240, 1568
Hpy166II	GTNNAC	2 cut(s)	553, 1408
Hpy188III	TCNNGA	9 cut(s)	158, 283, 737, 773, 793, 1080, 1154, 1503, 1919
Hpy8I	GTNNAC	2 cut(s)	553, 1408
Hpy99I	CGWCG	5 cut(s)	56, 208, 251, 275, 532
HpyAV	CCTTC	3 cut(s)	105, 328, 1151
HpyCH4III	ACNGT	4 cut(s)	1412, 1643, 1670, 1751
HpyCH4IV	ACGT	6 cut(s)	249, 394, 814, 1048, 1498, 1777
HpyF10VI	GCNNNNNNNGC	7 cut(s)	47, 56, 120, 131, 385, 544, 1287
HpyF3I	CTNAG	5 cut(s)	135, 345, 867, 1386, 1618
HpySE526I	ACGT	6 cut(s)	249, 394, 814, 1048, 1498, 1777
Hsp92I	GRCGYC	2 cut(s)	123, 524
Hsp92II	CATG	6 cut(s)	147, 170, 491, 1010, 1109, 1429
HspAI	GCGC	4 cut(s)	46, 48, 123, 524
KasI	GGCGCC	2 cut(s)	122, 523
KroI	GCCGGC	1 cut(s)	125
KroNI	GCCGGC	1 cut(s)	127
Ksp22I	TGATCA	3 cut(s)	75, 916, 1915
LmnI	GCTCC	5 cut(s)	224, 376, 580, 798, 1248
Lsp1109I	GCAGC	3 cut(s)	584, 646, 943
LweI	GCATC	5 cut(s)	206, 744, 1042, 1364, 1912
MaeI	CTAG	5 cut(s)	296, 414, 1572, 1851, 1899
MaeII	ACGT	6 cut(s)	249, 394, 814, 1048, 1498, 1777
MaeIII	GTNAC	1 cut(s)	24
MbiI	CCGCTC	2 cut(s)	267, 1196
MboII	GAAGA	2 cut(s)	442, 1312
MhlI	GDGCHC	4 cut(s)	282, 668, 1141, 1245
MlsI	TGGCCA	1 cut(s)	329
MluNI	TGGCCA	1 cut(s)	329
Mly113I	GGCGCC	2 cut(s)	123, 524
MlyI	GAGTC	3 cut(s)	427, 631, 956
MmeI	TCCRAC	3 cut(s)	354, 1351, 1662
Mox20I	TGGCCA	1 cut(s)	329
MreI	CGCCGGCG	1 cut(s)	125
MroNI	GCCGGC	1 cut(s)	125
MscI	TGGCCA	1 cut(s)	329
MseI	TTAA	2 cut(s)	759, 1455
MslI	CAYNNNNRTG	2 cut(s)	492, 1092
Msp20I	TGGCCA	1 cut(s)	329
MspI	CCGG	7 cut(s)	19, 104, 126, 193, 420, 426, 1842
MvaI	CCWGG	8 cut(s)	177, 224, 579, 672, 1342, 1473, 1488, 1509
MvnI	CGCG	2 cut(s)	46, 48
MwoI	GCNNNNNNNGC	7 cut(s)	47, 56, 120, 131, 385, 544, 1287
NaeI	GCCGGC	1 cut(s)	127
NarI	GGCGCC	2 cut(s)	123, 524
NciI	CCSGG	3 cut(s)	104, 194, 427
NdeI	CATATG	2 cut(s)	967, 1069
NgoMIV	GCCGGC	1 cut(s)	125
NlaIII	CATG	6 cut(s)	147, 170, 491, 1010, 1109, 1429
NlaIV	GGNNCC	8 cut(s)	124, 149, 220, 378, 424, 525, 1485, 1549
NmeAIII	GCCGAG	1 cut(s)	99
NmuCI	GTSAC	1 cut(s)	24
NspI	RCATGY	2 cut(s)	1010, 1429
PaeR7I	CTCGAG	1 cut(s)	281
PauI	GCGCGC	1 cut(s)	46
PciI	ACATGT	1 cut(s)	1425
PcsI	WCGNNNNNNNCGW	6 cut(s)	60, 126, 260, 279, 1159, 1456
PdiI	GCCGGC	1 cut(s)	127
PfeI	GAWTC	4 cut(s)	448, 502, 1559, 1827
PkrI	GCNGC	8 cut(s)	40, 58, 269, 574, 636, 846, 958, 1195
PleI	GAGTC	3 cut(s)	427, 630, 956
PluTI	GGCGCC	2 cut(s)	126, 527
PpsI	GAGTC	3 cut(s)	427, 630, 956
PpuMI	RGGWCCY	1 cut(s)	1484
PscI	ACATGT	1 cut(s)	1425
PsiI	TTATAA	1 cut(s)	998
Psp124BI	GAGCTC	1 cut(s)	1245
Psp1406I	AACGTT	1 cut(s)	1777
Psp5II	RGGWCCY	1 cut(s)	1484
Psp6I	CCWGG	8 cut(s)	175, 222, 577, 670, 1340, 1471, 1486, 1507
PspEI	GGTNACC	1 cut(s)	24
PspFI	CCCAGC	1 cut(s)	1295
PspGI	CCWGG	8 cut(s)	175, 222, 577, 670, 1340, 1471, 1486, 1507
PspN4I	GGNNCC	8 cut(s)	124, 149, 220, 378, 424, 525, 1485, 1549
PspPI	GGNCC	6 cut(s)	179, 989, 1469, 1484, 1505, 1526
PspPPI	RGGWCCY	1 cut(s)	1484
PstI	CTGCAG	1 cut(s)	961
PstNI	CAGNNNCTG	1 cut(s)	578
PteI	GCGCGC	1 cut(s)	46
RsaI	GTAC	5 cut(s)	610, 649, 804, 875, 1212
RsaNI	GTAC	5 cut(s)	609, 648, 803, 874, 1211
RseI	CAYNNNNRTG	2 cut(s)	492, 1092
SacI	GAGCTC	1 cut(s)	1245
SaqAI	TTAA	2 cut(s)	759, 1455
SatI	GCNGC	8 cut(s)	39, 57, 268, 573, 635, 845, 957, 1194
Sau96I	GGNCC	6 cut(s)	179, 989, 1469, 1484, 1505, 1526
SchI	GAGTC	3 cut(s)	427, 631, 956
SduI	GDGCHC	4 cut(s)	282, 668, 1141, 1245
SfaNI	GCATC	5 cut(s)	206, 744, 1042, 1364, 1912
SfcI	CTRYAG	1 cut(s)	957
SfoI	GGCGCC	2 cut(s)	124, 525
Sfr274I	CTCGAG	1 cut(s)	281
SgrAI	CRCCGGYG	1 cut(s)	125
SinI	GGWCC	4 cut(s)	989, 1469, 1484, 1505
SlaI	CTCGAG	1 cut(s)	281
SmiMI	CAYNNNNRTG	2 cut(s)	492, 1092
SmlI	CTYRAG	2 cut(s)	281, 793
SmoI	CTYRAG	2 cut(s)	281, 793
SsiI	CCGC	8 cut(s)	22, 39, 57, 82, 267, 845, 1194, 1443
SspDI	GGCGCC	2 cut(s)	122, 523
SspI	AATATT	1 cut(s)	1263
SspMI	CTAG	5 cut(s)	296, 414, 1572, 1851, 1899
SstI	GAGCTC	1 cut(s)	1245
StyI	CCWWGG	1 cut(s)	985
TaaI	ACNGT	4 cut(s)	1412, 1643, 1670, 1751
TaiI	ACGT	6 cut(s)	252, 397, 817, 1051, 1501, 1780
TaqII	GACCGA	2 cut(s)	1263, 1601
TauI	GCSGC	5 cut(s)	41, 59, 270, 847, 1196
TfiI	GAWTC	4 cut(s)	448, 502, 1559, 1827
Tru1I	TTAA	2 cut(s)	759, 1455
Tru9I	TTAA	2 cut(s)	759, 1455
TscAI	CASTG	3 cut(s)	1189, 1417, 1582
TseFI	GTSAC	1 cut(s)	24
TseI	GCWGC	3 cut(s)	572, 634, 956
Tsp45I	GTSAC	1 cut(s)	24
TspDTI	ATGAA	4 cut(s)	155, 718, 841, 1259
TspRI	CASTG	3 cut(s)	1189, 1417, 1582
VpaK11BI	GGWCC	4 cut(s)	989, 1469, 1484, 1505
XagI	CCTNNNNNAGG	1 cut(s)	1533
XapI	RAATTY	3 cut(s)	709, 1633, 1660
XceI	RCATGY	2 cut(s)	1010, 1429
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1222
XhoI	CTCGAG	1 cut(s)	281
XspI	CTAG	5 cut(s)	296, 414, 1572, 1851, 1899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.