Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000968

Physical Location & Seq

Genomic Coordinates Reverse (-)

69050074 .. 69052521

Gene Structure 2448 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020809

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGTCGTCATCCGGCCAACTGATTCCGGCCTCAGGCGACGTCGGTGGCGAGCAATGCCAAATATGGGTTAGCATGAGACCCTCATTTGTCATCAATGATTGCAGGCTTTATAAGTTTTTAGGGCGTGGGAGGAATCCTTTGGCCTTGGTTATGGCTCCGACAAGAGAGCTCGCGAAGCAGGTTGACAAGGAGTTCCACGAGGCAGCACCTGGCTTGGATACTATTTTTGTGTATGGTGGTACGCCCATTGGAAACCAAATCAGGCAGCTTGGCCATGGAACTGATGTGGCTGTGGGCACACCGGGCCGTATTATTGATCTAATTGATAGGGCTGCGTTGAATTTATCCGAAGTTCAGTTCATTGTTCTTGATGAAGCCGATGAGATGCTTAAAGTGGGATTTCAGGAGGCTGTTGAGACAATCTTAAAGAGCTTGCCAACGAAACGTCAGACCCTGATGTTCTCTGCTACAATGCCGCCTTTCATTAGAAGTCTTACTCAGAAGTACCTAAATAATCCAGCAGTTATTGATCTTGTTGGGGACAATGATCAGAAATTAGCAGATGGAATTTCCCTGTATTCTATTGTTGCGGAATGGAAAAGCATCGATCCTTGGACCACTTATAACAGTAAGTATATAATTTTCTTGTTTTCGGAACATGCAAAAGGAGGGAAGTGCATTATTTTTTCTCAGAGAAAACGTGATGCAGATAATTTGGCATATGCCCTGTCAAGAAGCCATAAATGTGAGGCTTTGCACGGGGATATTTCACAACAGCAGAGGGAAAGGGCACTTTCAGGTTTCCGAGATGGGCGTTTCGATGTTTTAGTTGCAACAGATGTTGCTGCTCGTGGGCTTGATGTACCCAATGTTGATCTGGTGATACACTATGAGCTTCCAAACAATTCAGAGATATTTGTTGATCGGTCAGGGCGAACAGGTCGTGCTGGGAAGAAAGGAAGTGCTATCCTGATTTACTCACAAAATCAGGCCAGGAACGTCCAAATGAGTCAACGCGATGTAGGATGCAGATTCACAGAGCTCCCCCGGATTGCTGCTGATAGCAGCTGTGTGAGCATGTTCTCTAACAGAGGTAGTAGCGGTGGTCATTTTGGTGGTTCCGGGGGATCTGGATATGGTCGTCCAGCAAACCGAGGTGGAAACTTCGGTAATTCAGGTTTTGGCCGTTCTGGTGGTTTTGGTGGTTCTGACCGTTCCAATGGTGGTTCAGACCATTCAAGCGGTTTTGGTGGTTCAGACCGTTCAAGTGGTTTTGGAGGGTTTGGTAGTTCTGATCGTTCAAGTGGCCGTTCAGGTGGGTTTGGAGGTCGTTCCGGTGGTTCTAGGGGCTTTGGTGGGAATAGTTCTAGCCGGTTTGGAAGCTTTGGGAAAGACAATGGTTTCACGGGGTTTGGAAATTCTGACTGTTCAAGTGGTTCGGGAGGGTTTGGTAGTTCTGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010467 GO:0010501 GO:0016032 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018995 GO:0019034 GO:0019058 GO:0019079 GO:0030312 GO:0031974 GO:0031981 GO:0033643 GO:0033646 GO:0033647 GO:0033648 GO:0034641 GO:0039694 GO:0042025 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043656 GO:0043657 GO:0044094 GO:0044215 GO:0044216 GO:0044217 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

489

Amino Acids

51.93

Weight (kDa)

8.76

Isoelectric Point (pI)

35.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	43 - 161	1.2e-29	DEAD/DEAH box helicase
Helicase_C	PF00271	216 - 317	7.1e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22310 AT3G22310 AT3G22330
fragaria_vesca	FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140
malus_domestica	MD09G1134900.v1.1 MD17G1123900.v1.1
prunus_persica	Prupe.3G191800_v2.0.a1 Prupe.3G191800_v2.0.a1
pyrus_communis	pycom09g05600 pycom17g11530
rosa_chinensis	RchiOBHm_Chr2g0154771 RchiOBHm_Chr2g0154851 RchiOBHm_Chr2g0155131
rosa_laevigata	RLG00000020802 RLG00000020805 RLG00000020809 RLG00000020814 RLG00000020820
rosa_multiflora	Rmu_sc0001027.1_g000001 Rmu_sc0002048.1_g000007 Rmu_sc0002048.1_g000019 Rmu_sc0002048.1_g000035 Rmu_sc0004976.1_g000007
rosa_roxburghii	Rroxscaffold_2G00093940 Rroxscaffold_2G00094090
rosa_rugosa	Rorug02G0444900.1 Rorug02G0445000 Rorug02G0445500 Rorug02G0445600
rosa_samantha	Rh2AG510600 Rh2AG511000 Rh2AG511200 Rh2AG511700 Rh2BG521500 Rh2BG521700 Rh2BG522200 Rh2BG522500 Rh2CG495800 Rh2CG496100 Rh2CG496300 Rh2CG496700 Rh2DG531600 Rh2DG531900 Rh2DG532200
rosa_wichuraiana	Rw2G042000 Rw2G042030 Rw2G042040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	111, 624
AatII	GACGTC	1 cut(s)	42
Acc36I	ACCTGC	1 cut(s)	169
AccII	CGCG	2 cut(s)	173, 1017
AciI	CCGC	4 cut(s)	476, 590, 1101, 1242
AclWI	GGATC	2 cut(s)	602, 1135
AcoI	YGGCCR	4 cut(s)	13, 271, 1183, 1306
AcsI	RAATTY	3 cut(s)	340, 567, 1417
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	3 cut(s)	241, 506, 864
AfiI	CCNNNNNNNGG	2 cut(s)	32, 64
AgsI	TTSAA	5 cut(s)	340, 1239, 1266, 1302, 1431
AjnI	CCWGG	2 cut(s)	208, 992
AluBI	AGCT	7 cut(s)	169, 268, 432, 895, 1042, 1068, 1383
AluI	AGCT	7 cut(s)	169, 268, 432, 895, 1042, 1068, 1383
Alw21I	GWGCWC	2 cut(s)	171, 1044
Alw26I	GTCTC	2 cut(s)	70, 410
AlwI	GGATC	2 cut(s)	602, 1135
AlwNI	CAGNNNCTG	2 cut(s)	209, 454
AoxI	GGCC	8 cut(s)	13, 27, 141, 271, 304, 990, 1183, 1306
ApeKI	GCWGC	6 cut(s)	203, 265, 332, 845, 1055, 1065
ApoI	RAATTY	3 cut(s)	340, 567, 1417
AspS9I	GGNCC	2 cut(s)	304, 615
AsuC2I	CCSGG	3 cut(s)	303, 1048, 1123
AsuHPI	GGTGA	1 cut(s)	892
AvaII	GGWCC	1 cut(s)	615
AxyI	CCTNAGG	1 cut(s)	31
BaeGI	GKGCMC	2 cut(s)	299, 793
BalI	TGGCCA	1 cut(s)	273
BanII	GRGCYC	2 cut(s)	171, 1044
BauI	CACGAG	2 cut(s)	197, 849
Bbv12I	GWGCWC	2 cut(s)	171, 1044
BbvI	GCAGC	6 cut(s)	215, 277, 319, 832, 1042, 1077
BccI	CCATC	2 cut(s)	557, 803
BceAI	ACGGC	3 cut(s)	291, 1170, 1293
BciT130I	CCWGG	2 cut(s)	210, 994
BciVI	GTATCC	1 cut(s)	211
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	3 cut(s)	303, 1048, 1123
BcoDI	GTCTC	2 cut(s)	70, 410
BfaI	CTAG	2 cut(s)	1344, 1368
BfuAI	ACCTGC	1 cut(s)	169
BfuI	GTATCC	1 cut(s)	211
BisI	GCNGC	7 cut(s)	204, 266, 333, 476, 846, 1056, 1066
BlsI	GCNGC	7 cut(s)	205, 267, 334, 477, 847, 1057, 1067
Bme1390I	CCNGG	5 cut(s)	210, 303, 994, 1048, 1123
Bme18I	GGWCC	1 cut(s)	615
BmgT120I	GGNCC	2 cut(s)	304, 615
BmiI	GGNNCC	2 cut(s)	156, 1120
BmrFI	CCNGG	5 cut(s)	210, 303, 994, 1048, 1123
BmsI	GCATC	4 cut(s)	375, 612, 694, 1016
BpuMI	CCSGG	3 cut(s)	303, 1048, 1123
Bsa29I	ATCGAT	1 cut(s)	606
BsaHI	GRCGYC	1 cut(s)	39
BsaI	GGTCTC	1 cut(s)	70
BsaJI	CCNNGG	6 cut(s)	144, 274, 611, 1046, 1122, 1153
BsaWI	WCCGGW	1 cut(s)	1334
Bsc4I	CCNNNNNNNGG	2 cut(s)	32, 64
Bse118I	RCCGGY	1 cut(s)	1371
Bse21I	CCTNAGG	1 cut(s)	31
Bse3DI	GCAATG	1 cut(s)	59
BseBI	CCWGG	2 cut(s)	210, 994
BseCI	ATCGAT	1 cut(s)	606
BseDI	CCNNGG	6 cut(s)	144, 274, 611, 1046, 1122, 1153
BseGI	GGATG	2 cut(s)	8, 1031
BseLI	CCNNNNNNNGG	2 cut(s)	32, 64
BseMI	GCAATG	1 cut(s)	59
BseMII	CTCAG	3 cut(s)	45, 512, 704
BseSI	GKGCMC	2 cut(s)	299, 793
BseXI	GCAGC	6 cut(s)	215, 277, 319, 832, 1042, 1077
BseYI	CCCAGC	1 cut(s)	947
Bsh1236I	CGCG	2 cut(s)	173, 1017
BshFI	GGCC	8 cut(s)	15, 29, 143, 273, 306, 992, 1185, 1308
BshVI	ATCGAT	1 cut(s)	606
BsiHKAI	GWGCWC	2 cut(s)	171, 1044
BsiSI	CCGG	7 cut(s)	12, 26, 302, 1048, 1122, 1335, 1372
BslFI	GGGAC	1 cut(s)	554
BslI	CCNNNNNNNGG	2 cut(s)	32, 64
BsmAI	GTCTC	2 cut(s)	70, 410
BsmFI	GGGAC	1 cut(s)	554
BsnI	GGCC	8 cut(s)	15, 29, 143, 273, 306, 992, 1185, 1308
Bso31I	GGTCTC	1 cut(s)	70
Bsp1286I	GDGCHC	4 cut(s)	171, 299, 793, 1044
Bsp143I	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
Bsp19I	CCATGG	1 cut(s)	274
Bsp68I	TCGCGA	1 cut(s)	173
BspACI	CCGC	4 cut(s)	476, 590, 1101, 1242
BspANI	GGCC	8 cut(s)	15, 29, 143, 273, 306, 992, 1185, 1308
BspCNI	CTCAG	3 cut(s)	44, 511, 703
BspDI	ATCGAT	1 cut(s)	606
BspFNI	CGCG	2 cut(s)	173, 1017
BspLI	GGNNCC	2 cut(s)	156, 1120
BspMI	ACCTGC	1 cut(s)	169
BspPI	GGATC	2 cut(s)	602, 1135
BspTNI	GGTCTC	1 cut(s)	70
BsrDI	GCAATG	1 cut(s)	59
BsrFI	RCCGGY	1 cut(s)	1371
BssAI	RCCGGY	1 cut(s)	1371
BssECI	CCNNGG	6 cut(s)	144, 274, 611, 1046, 1122, 1153
BssMI	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	2 cut(s)	197, 849
BssT1I	CCWWGG	3 cut(s)	144, 274, 611
Bst2BI	CACGAG	2 cut(s)	197, 849
Bst2UI	CCWGG	2 cut(s)	210, 994
Bst4CI	ACNGT	4 cut(s)	629, 1214, 1262, 1427
BstACI	GRCGYC	1 cut(s)	39
BstC8I	GCNNGC	4 cut(s)	50, 104, 171, 434
BstDEI	CTNAG	3 cut(s)	31, 498, 690
BstDSI	CCRYGG	1 cut(s)	274
BstF5I	GGATG	2 cut(s)	8, 1031
BstFNI	CGCG	2 cut(s)	173, 1017
BstKTI	GATC	8 cut(s)	319, 532, 550, 610, 877, 925, 1130, 1297
BstMAI	GTCTC	2 cut(s)	70, 410
BstMBI	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
BstMWI	GCNNNNNNNGC	4 cut(s)	54, 175, 303, 1074
BstNI	CCWGG	2 cut(s)	210, 994
BstNSI	RCATGY	2 cut(s)	662, 1081
BstSCI	CCNGG	5 cut(s)	208, 301, 992, 1046, 1121
BstSLI	GKGCMC	2 cut(s)	299, 793
BstUI	CGCG	2 cut(s)	173, 1017
BstV1I	GCAGC	6 cut(s)	215, 277, 319, 832, 1042, 1077
BstX2I	RGATCY	1 cut(s)	1127
BstYI	RGATCY	1 cut(s)	1127
Bsu15I	ATCGAT	1 cut(s)	606
Bsu36I	CCTNAGG	1 cut(s)	31
BsuI	GTATCC	1 cut(s)	211
BsuRI	GGCC	8 cut(s)	15, 29, 143, 273, 306, 992, 1185, 1308
BsuTUI	ATCGAT	1 cut(s)	606
BtgI	CCRYGG	1 cut(s)	274
BtgZI	GCGATG	1 cut(s)	1032
BtsCI	GGATG	2 cut(s)	8, 1031
BtuMI	TCGCGA	1 cut(s)	173
BveI	ACCTGC	1 cut(s)	169
Cac8I	GCNNGC	4 cut(s)	50, 104, 171, 434
CaiI	CAGNNNCTG	2 cut(s)	209, 454
Cfr10I	RCCGGY	1 cut(s)	1371
Cfr13I	GGNCC	2 cut(s)	304, 615
ClaI	ATCGAT	1 cut(s)	606
Csp6I	GTAC	3 cut(s)	240, 505, 863
CviAII	CATG	4 cut(s)	73, 275, 659, 1078
CviQI	GTAC	3 cut(s)	240, 505, 863
DdeI	CTNAG	3 cut(s)	31, 498, 690
DpnI	GATC	8 cut(s)	318, 531, 549, 609, 876, 924, 1129, 1296
DpnII	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
EaeI	YGGCCR	4 cut(s)	13, 271, 1183, 1306
Ecl136II	GAGCTC	2 cut(s)	169, 1042
Eco130I	CCWWGG	3 cut(s)	144, 274, 611
Eco24I	GRGCYC	2 cut(s)	171, 1044
Eco31I	GGTCTC	1 cut(s)	70
Eco47I	GGWCC	1 cut(s)	615
Eco53kI	GAGCTC	2 cut(s)	169, 1042
Eco81I	CCTNAGG	1 cut(s)	31
EcoICRI	GAGCTC	2 cut(s)	169, 1042
EcoRII	CCWGG	2 cut(s)	208, 992
EcoT14I	CCWWGG	3 cut(s)	144, 274, 611
EcoT38I	GRGCYC	2 cut(s)	171, 1044
ErhI	CCWWGG	3 cut(s)	144, 274, 611
FaeI	CATG	4 cut(s)	76, 278, 662, 1081
FaqI	GGGAC	1 cut(s)	554
FatI	CATG	4 cut(s)	72, 274, 658, 1077
FauNDI	CATATG	1 cut(s)	721
FbaI	TGATCA	1 cut(s)	547
Fnu4HI	GCNGC	7 cut(s)	204, 266, 333, 476, 846, 1056, 1066
FokI	GGATG	1 cut(s)	1038
FriOI	GRGCYC	2 cut(s)	171, 1044
Fsp4HI	GCNGC	7 cut(s)	204, 266, 333, 476, 846, 1056, 1066
FspBI	CTAG	2 cut(s)	1344, 1368
GluI	GCNGC	7 cut(s)	204, 266, 333, 476, 846, 1056, 1066
GsaI	CCCAGC	1 cut(s)	951
HaeIII	GGCC	8 cut(s)	15, 29, 143, 273, 306, 992, 1185, 1308
HapII	CCGG	7 cut(s)	12, 26, 302, 1048, 1122, 1335, 1372
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	4 cut(s)	76, 278, 662, 1081
HincII	GTYRAC	2 cut(s)	184, 1013
HindII	GTYRAC	2 cut(s)	184, 1013
HindIII	AAGCTT	1 cut(s)	1381
HinfI	GANTC	4 cut(s)	22, 133, 1009, 1032
HpaII	CCGG	7 cut(s)	12, 26, 302, 1048, 1122, 1335, 1372
HphI	GGTGA	1 cut(s)	892
Hpy166II	GTNNAC	2 cut(s)	184, 1013
Hpy188III	TCNNGA	7 cut(s)	172, 368, 404, 732, 970, 1131, 1440
Hpy8I	GTNNAC	2 cut(s)	184, 1013
Hpy99I	CGWCG	2 cut(s)	41, 44
HpyCH4III	ACNGT	4 cut(s)	629, 1214, 1262, 1427
HpyCH4IV	ACGT	4 cut(s)	39, 445, 700, 999
HpyCH4V	TGCA	7 cut(s)	102, 662, 678, 707, 757, 833, 1029
HpyF10VI	GCNNNNNNNGC	4 cut(s)	54, 175, 303, 1074
HpyF3I	CTNAG	3 cut(s)	31, 498, 690
HpySE526I	ACGT	4 cut(s)	39, 445, 700, 999
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	4 cut(s)	76, 278, 662, 1081
Ksp22I	TGATCA	1 cut(s)	547
Kzo9I	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
LmnI	GCTCC	2 cut(s)	160, 1047
Lsp1109I	GCAGC	6 cut(s)	215, 277, 319, 832, 1042, 1077
LweI	GCATC	4 cut(s)	375, 612, 694, 1016
MaeI	CTAG	2 cut(s)	1344, 1368
MaeII	ACGT	4 cut(s)	39, 445, 700, 999
MalI	GATC	8 cut(s)	318, 531, 549, 609, 876, 924, 1129, 1296
MboI	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
MboII	GAAGA	1 cut(s)	964
MflI	RGATCY	1 cut(s)	1127
MhlI	GDGCHC	4 cut(s)	171, 299, 793, 1044
MlsI	TGGCCA	1 cut(s)	273
MluCI	AATT	9 cut(s)	321, 340, 554, 567, 639, 712, 904, 1171, 1417
MluNI	TGGCCA	1 cut(s)	273
MlyI	GAGTC	1 cut(s)	1018
MmeI	TCCRAC	1 cut(s)	182
Mox20I	TGGCCA	1 cut(s)	273
MscI	TGGCCA	1 cut(s)	273
MseI	TTAA	2 cut(s)	390, 425
MslI	CAYNNNNRTG	2 cut(s)	744, 1113
Msp20I	TGGCCA	1 cut(s)	273
MspA1I	CMGCKG	1 cut(s)	1068
MspI	CCGG	7 cut(s)	12, 26, 302, 1048, 1122, 1335, 1372
MspR9I	CCNGG	5 cut(s)	210, 303, 994, 1048, 1123
MvaI	CCWGG	2 cut(s)	210, 994
MvnI	CGCG	2 cut(s)	173, 1017
MwoI	GCNNNNNNNGC	4 cut(s)	54, 175, 303, 1074
NciI	CCSGG	3 cut(s)	303, 1048, 1123
NcoI	CCATGG	1 cut(s)	274
NdeI	CATATG	1 cut(s)	721
NdeII	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
NlaIII	CATG	4 cut(s)	76, 278, 662, 1081
NlaIV	GGNNCC	2 cut(s)	156, 1120
NruI	TCGCGA	1 cut(s)	173
NspI	RCATGY	2 cut(s)	662, 1081
PcsI	WCGNNNNNNNCGW	2 cut(s)	45, 931
PfeI	GAWTC	3 cut(s)	22, 133, 1032
PkrI	GCNGC	7 cut(s)	205, 267, 334, 477, 847, 1057, 1067
PleI	GAGTC	1 cut(s)	1017
PpsI	GAGTC	1 cut(s)	1017
PsiI	TTATAA	2 cut(s)	111, 624
Psp124BI	GAGCTC	2 cut(s)	171, 1044
Psp6I	CCWGG	2 cut(s)	208, 992
PspFI	CCCAGC	1 cut(s)	947
PspGI	CCWGG	2 cut(s)	208, 992
PspN4I	GGNNCC	2 cut(s)	156, 1120
PspPI	GGNCC	2 cut(s)	304, 615
PstNI	CAGNNNCTG	2 cut(s)	209, 454
PsuI	RGATCY	1 cut(s)	1127
PvuII	CAGCTG	1 cut(s)	1068
RruI	TCGCGA	1 cut(s)	173
RsaI	GTAC	3 cut(s)	241, 506, 864
RsaNI	GTAC	3 cut(s)	240, 505, 863
RseI	CAYNNNNRTG	2 cut(s)	744, 1113
SacI	GAGCTC	2 cut(s)	171, 1044
SaqAI	TTAA	2 cut(s)	390, 425
SatI	GCNGC	7 cut(s)	204, 266, 333, 476, 846, 1056, 1066
Sau3AI	GATC	8 cut(s)	316, 529, 547, 607, 874, 922, 1127, 1294
Sau96I	GGNCC	2 cut(s)	304, 615
SchI	GAGTC	1 cut(s)	1018
ScrFI	CCNGG	5 cut(s)	210, 303, 994, 1048, 1123
SduI	GDGCHC	4 cut(s)	171, 299, 793, 1044
SfaNI	GCATC	4 cut(s)	375, 612, 694, 1016
SinI	GGWCC	1 cut(s)	615
SmiMI	CAYNNNNRTG	2 cut(s)	744, 1113
Sse9I	AATT	9 cut(s)	321, 340, 554, 567, 639, 712, 904, 1171, 1417
SsiI	CCGC	4 cut(s)	476, 590, 1101, 1242
SspMI	CTAG	2 cut(s)	1344, 1368
SstI	GAGCTC	2 cut(s)	171, 1044
StyD4I	CCNGG	5 cut(s)	208, 301, 992, 1046, 1121
StyI	CCWWGG	3 cut(s)	144, 274, 611
TaaI	ACNGT	4 cut(s)	629, 1214, 1262, 1427
TaiI	ACGT	4 cut(s)	42, 448, 703, 1002
TaqI	TCGA	2 cut(s)	606, 819
TaqII	GACCGA	1 cut(s)	915
TasI	AATT	9 cut(s)	321, 340, 554, 567, 639, 712, 904, 1171, 1417
TauI	GCSGC	1 cut(s)	478
TfiI	GAWTC	3 cut(s)	22, 133, 1032
Tru1I	TTAA	2 cut(s)	390, 425
Tru9I	TTAA	2 cut(s)	390, 425
TseI	GCWGC	6 cut(s)	203, 265, 332, 845, 1055, 1065
TspDTI	ATGAA	3 cut(s)	349, 387, 472
VpaK11BI	GGWCC	1 cut(s)	615
XapI	RAATTY	3 cut(s)	340, 567, 1417
XceI	RCATGY	2 cut(s)	662, 1081
XcmI	CCANNNNNNNNNTGG	1 cut(s)	874
XspI	CTAG	2 cut(s)	1344, 1368
ZraI	GACGTC	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.