Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000968

Physical Location & Seq

Genomic Coordinates Reverse (-)

57212757 .. 57215006

Gene Structure 2250 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0445600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1128 bp

ATGGAGGAGGACGACGAGATGCATTCACCGGTGTCGGCGGGGAGCGGATCTCCGGCGTCGCCGAGGGCGAACGGTCGGATAACGGTGACGGTGGCGGTTCCGTCTCAGATACCGACGGCGGCGCAAGAGTCGCCGCAGAACAACACGCTAACCCTAGCGCTGCCGTCGCAGGTCAGAAGCAGCGGCGGGAGGGAGGACTGCTGGAGCGAAAGCGCGACGGCGGTGCTGATCGAGGCGTGGGGGGAGAGGTACCTGGAGCTGAGCAGAGGGAACCTGAAGCAGAAGCACTGGAAGGAGGTGGCCGACATTGTGAGTAGCAGAGAGGACTATGGGAAAATCCCCAAAACTGATATCCAGTGCAAGAACAGAATCGACACTGTGAAGAAGAAGTATAAGTTGGAGAAATCGAAGATGATGGCCGGAGGTGGGCCGAGCAAGTGGCCCTTTTTCGAAAAGCTTGATCATTTGATTGGCGCCACTGCTAAGGGTACCCTTGGTTCTGCTTCTGGTGGTGGTTCGGTGCCGCCGGGTTTCTTGGCTAAGAACCATAAGATTCCGATGGGAATGCCGGTCGGGGTCCGAGGAGGAGGAGTTGGTCATTTTGTCCCCAAACACCAGCAGCAGCTGCAGAAGGCAAATGCTAAGAAAAGGGATCCGGTGGAGTGGGATTCGGATTCTTCAAGGGAGGTCTCTCCGGTCTCTGCTGATAGCTTTCCGCCCCCTGTTTCTGAGCTGAAGAGGCCGAGGATGGCTGGGCGGGGGGTGAATACTGGTTTAGGGAGGGGGAGAGGAGGAGGAGGAGGAGGAGGAGGGGTTGGGAAAGAGATTAGAGGAAGAGTTGGGGGTGGAGAGAAGAAAGGTGGGTGGGGGAATTCAATGAGGGAATTGGCGCAGTCAATGCTGAGGTTCGGGGAGGCTTATGAGCACGCCGAGACTGCAAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAAGAGTTGGAGTTGCAAAGAATGCAGTTTTTCATGAAGACCCAGCTGGAGATTTCGCAGCTCAAGCATGGTAGGAGGAATGGGAATGCGAGTAATCATCACCGCAGCAGCAACAACAACAACAACAGCGATAGCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010467 GO:0010501 GO:0016032 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018995 GO:0019034 GO:0019058 GO:0019079 GO:0030312 GO:0031974 GO:0031981 GO:0033643 GO:0033646 GO:0033647 GO:0033648 GO:0034641 GO:0039694 GO:0042025 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043656 GO:0043657 GO:0044094 GO:0044215 GO:0044216 GO:0044217 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0070013 GO:0070035 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

375

Amino Acids

40.62

Weight (kDa)

9.78

Isoelectric Point (pI)

50.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	66 - 156	1.1e-20	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000968)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22310 AT3G22310 AT3G22330
fragaria_vesca	FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140 FvH4_6g40140
malus_domestica	MD09G1134900.v1.1 MD17G1123900.v1.1
prunus_persica	Prupe.3G191800_v2.0.a1 Prupe.3G191800_v2.0.a1
pyrus_communis	pycom09g05600 pycom17g11530
rosa_chinensis	RchiOBHm_Chr2g0154771 RchiOBHm_Chr2g0154851 RchiOBHm_Chr2g0155131
rosa_laevigata	RLG00000020802 RLG00000020805 RLG00000020809 RLG00000020814 RLG00000020820
rosa_multiflora	Rmu_sc0001027.1_g000001 Rmu_sc0002048.1_g000007 Rmu_sc0002048.1_g000019 Rmu_sc0002048.1_g000035 Rmu_sc0004976.1_g000007
rosa_roxburghii	Rroxscaffold_2G00093940 Rroxscaffold_2G00094090
rosa_rugosa	Rorug02G0444900.1 Rorug02G0445000 Rorug02G0445500 Rorug02G0445600
rosa_samantha	Rh2AG510600 Rh2AG511000 Rh2AG511200 Rh2AG511700 Rh2BG521500 Rh2BG521700 Rh2BG522200 Rh2BG522500 Rh2CG495800 Rh2CG496100 Rh2CG496300 Rh2CG496700 Rh2DG531600 Rh2DG531900 Rh2DG532200
rosa_wichuraiana	Rw2G042000 Rw2G042030 Rw2G042040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	940
Acc36I	ACCTGC	2 cut(s)	160, 940
Acc65I	GGTACC	2 cut(s)	249, 488
AccB1I	GGYRCC	4 cut(s)	249, 473, 488, 520
AccBSI	CCGCTC	1 cut(s)	45
AccII	CGCG	1 cut(s)	215
AclWI	GGATC	3 cut(s)	55, 647, 660
AcoI	YGGCCR	2 cut(s)	300, 417
AcsI	RAATTY	1 cut(s)	871
AcuI	CTGAAG	2 cut(s)	296, 755
AcyI	GRCGYC	2 cut(s)	56, 474
AfaI	GTAC	2 cut(s)	251, 490
AfeI	AGCGCT	1 cut(s)	159
AfiI	CCNNNNNNNGG	1 cut(s)	426
AgeI	ACCGGT	1 cut(s)	28
AgsI	TTSAA	2 cut(s)	681, 876
AjnI	CCWGG	1 cut(s)	252
AjuI	GAANNNNNNNTTGG	2 cut(s)	380, 412
AluBI	AGCT	8 cut(s)	259, 457, 625, 711, 733, 943, 1033, 1048
AluI	AGCT	8 cut(s)	259, 457, 625, 711, 733, 943, 1033, 1048
Alw21I	GWGCWC	1 cut(s)	927
Alw26I	GTCTC	4 cut(s)	108, 694, 703, 926
AlwI	GGATC	3 cut(s)	55, 647, 660
AlwNI	CAGNNNCTG	1 cut(s)	625
Aor51HI	AGCGCT	1 cut(s)	159
AoxI	GGCC	5 cut(s)	300, 417, 428, 440, 740
ApoI	RAATTY	1 cut(s)	871
AsiGI	ACCGGT	1 cut(s)	28
Asp718I	GGTACC	2 cut(s)	249, 488
AspLEI	GCGC	5 cut(s)	124, 160, 215, 476, 892
AspS9I	GGNCC	3 cut(s)	428, 441, 577
AsuC2I	CCSGG	1 cut(s)	528
AsuHPI	GGTGA	4 cut(s)	18, 97, 775, 1079
AsuII	TTCGAA	1 cut(s)	450
AvaII	GGWCC	1 cut(s)	577
BamHI	GGATCC	1 cut(s)	652
BanI	GGYRCC	4 cut(s)	249, 473, 488, 520
BbsI	GAAGAC	1 cut(s)	1031
Bbv12I	GWGCWC	1 cut(s)	927
BbvCI	CCTCAGC	1 cut(s)	902
BccI	CCATC	4 cut(s)	409, 553, 742, 955
BceAI	ACGGC	3 cut(s)	132, 148, 234
BcgI	CGANNNNNNTGC	4 cut(s)	205, 239, 547, 581
BciT130I	CCWGG	1 cut(s)	254
BclI	TGATCA	1 cut(s)	460
BcnI	CCSGG	1 cut(s)	528
BcoDI	GTCTC	4 cut(s)	108, 694, 703, 926
BfaI	CTAG	2 cut(s)	155, 1126
BfmI	CTRYAG	2 cut(s)	626, 944
BfoI	RGCGCY	2 cut(s)	161, 477
BfuAI	ACCTGC	2 cut(s)	160, 940
BlpI	GCTNAGC	1 cut(s)	260
Bme1390I	CCNGG	2 cut(s)	254, 528
Bme18I	GGWCC	1 cut(s)	577
BmgT120I	GGNCC	3 cut(s)	428, 441, 577
BmiI	GGNNCC	8 cut(s)	99, 251, 272, 475, 490, 522, 578, 654
BmrFI	CCNGG	2 cut(s)	254, 528
BmsI	GCATC	1 cut(s)	9
BpiI	GAAGAC	1 cut(s)	1031
BplI	GAGNNNNNCTC	2 cut(s)	34, 66
BpmI	CTGGAG	3 cut(s)	223, 275, 1055
Bpu10I	CCTNAGC	2 cut(s)	483, 902
Bpu1102I	GCTNAGC	1 cut(s)	260
Bpu14I	TTCGAA	1 cut(s)	450
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	1 cut(s)	528
BsaHI	GRCGYC	2 cut(s)	56, 474
BsaI	GGTCTC	2 cut(s)	694, 703
BsaJI	CCNNGG	4 cut(s)	62, 493, 580, 743
BsaWI	WCCGGW	3 cut(s)	28, 655, 694
BsaXI	ACNNNNNCTCC	4 cut(s)	576, 606, 798, 828
Bsc4I	CCNNNNNNNGG	1 cut(s)	426
Bse118I	RCCGGY	2 cut(s)	28, 568
Bse1I	ACTGG	3 cut(s)	293, 355, 775
BseBI	CCWGG	1 cut(s)	254
BseDI	CCNNGG	4 cut(s)	62, 493, 580, 743
BseGI	GGATG	2 cut(s)	753, 981
BseLI	CCNNNNNNNGG	1 cut(s)	426
BseMII	CTCAG	4 cut(s)	119, 251, 720, 893
BseNI	ACTGG	3 cut(s)	293, 355, 775
BseYI	CCCAGC	2 cut(s)	752, 1029
Bsh1236I	CGCG	1 cut(s)	215
Bsh1285I	CGRYCG	2 cut(s)	76, 573
BshFI	GGCC	5 cut(s)	302, 419, 430, 442, 742
BshNI	GGYRCC	4 cut(s)	249, 473, 488, 520
BshTI	ACCGGT	1 cut(s)	28
BsiEI	CGRYCG	2 cut(s)	76, 573
BsiHKAI	GWGCWC	1 cut(s)	927
BsiSI	CCGG	7 cut(s)	29, 53, 420, 527, 569, 656, 695
BslFI	GGGAC	1 cut(s)	590
BslI	CCNNNNNNNGG	1 cut(s)	426
BsmAI	GTCTC	4 cut(s)	108, 694, 703, 926
BsmBI	CGTCTC	1 cut(s)	108
BsmFI	GGGAC	1 cut(s)	590
BsmI	GAATGC	4 cut(s)	22, 570, 1014, 1078
BsnI	GGCC	5 cut(s)	302, 419, 430, 442, 742
Bso31I	GGTCTC	2 cut(s)	694, 703
Bsp119I	TTCGAA	1 cut(s)	450
Bsp1286I	GDGCHC	1 cut(s)	927
Bsp143I	GATC	4 cut(s)	47, 228, 460, 652
Bsp1720I	GCTNAGC	1 cut(s)	260
BspANI	GGCC	5 cut(s)	302, 419, 430, 442, 742
BspCNI	CTCAG	4 cut(s)	118, 252, 721, 894
BspFNI	CGCG	1 cut(s)	215
BspHI	TCATGA	1 cut(s)	1020
BspLI	GGNNCC	8 cut(s)	99, 251, 272, 475, 490, 522, 578, 654
BspMAI	CTGCAG	2 cut(s)	630, 948
BspMI	ACCTGC	2 cut(s)	160, 940
BspPI	GGATC	3 cut(s)	55, 647, 660
BspT104I	TTCGAA	1 cut(s)	450
BspT107I	GGYRCC	4 cut(s)	249, 473, 488, 520
BspTNI	GGTCTC	2 cut(s)	694, 703
BsrBI	CCGCTC	1 cut(s)	45
BsrFI	RCCGGY	2 cut(s)	28, 568
BsrI	ACTGG	3 cut(s)	293, 355, 775
BssAI	RCCGGY	2 cut(s)	28, 568
BssECI	CCNNGG	4 cut(s)	62, 493, 580, 743
BssMI	GATC	4 cut(s)	47, 228, 460, 652
BssNI	GRCGYC	2 cut(s)	56, 474
BssT1I	CCWWGG	1 cut(s)	493
Bst2UI	CCWGG	1 cut(s)	254
Bst4CI	ACNGT	4 cut(s)	74, 85, 91, 379
Bst6I	CTCTTC	2 cut(s)	731, 829
BstACI	GRCGYC	2 cut(s)	56, 474
BstAPI	GCANNNNNTGC	3 cut(s)	625, 898, 1009
BstBI	TTCGAA	1 cut(s)	450
BstC8I	GCNNGC	1 cut(s)	927
BstDEI	CTNAG	7 cut(s)	105, 260, 483, 540, 642, 729, 902
BstF5I	GGATG	2 cut(s)	753, 981
BstFNI	CGCG	1 cut(s)	215
BstH2I	RGCGCY	2 cut(s)	161, 477
BstHHI	GCGC	5 cut(s)	124, 160, 215, 476, 892
BstKTI	GATC	4 cut(s)	50, 231, 463, 655
BstMAI	GTCTC	4 cut(s)	108, 694, 703, 926
BstMBI	GATC	4 cut(s)	47, 228, 460, 652
BstMCI	CGRYCG	2 cut(s)	76, 573
BstMWI	GCNNNNNNNGC	8 cut(s)	130, 166, 625, 739, 898, 935, 1009, 1051
BstNI	CCWGG	1 cut(s)	254
BstSCI	CCNGG	2 cut(s)	252, 526
BstSFI	CTRYAG	2 cut(s)	626, 944
BstUI	CGCG	1 cut(s)	215
BstV2I	GAAGAC	1 cut(s)	1031
BstX2I	RGATCY	2 cut(s)	47, 652
BstYI	RGATCY	2 cut(s)	47, 652
BsuRI	GGCC	5 cut(s)	302, 419, 430, 442, 742
BtsCI	GGATG	2 cut(s)	753, 981
BtsI	GCAGTG	1 cut(s)	477
BtsIMutI	CAGTG	4 cut(s)	286, 362, 375, 477
BveI	ACCTGC	2 cut(s)	160, 940
Cac8I	GCNNGC	1 cut(s)	927
CaiI	CAGNNNCTG	1 cut(s)	625
CciI	TCATGA	1 cut(s)	1020
CfoI	GCGC	5 cut(s)	124, 160, 215, 476, 892
Cfr10I	RCCGGY	2 cut(s)	28, 568
Cfr13I	GGNCC	3 cut(s)	428, 441, 577
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	2 cut(s)	250, 489
CspAI	ACCGGT	1 cut(s)	28
CviAII	CATG	2 cut(s)	1021, 1055
CviQI	GTAC	2 cut(s)	250, 489
DdeI	CTNAG	7 cut(s)	105, 260, 483, 540, 642, 729, 902
DinI	GGCGCC	1 cut(s)	475
DpnI	GATC	4 cut(s)	49, 230, 462, 654
DpnII	GATC	4 cut(s)	47, 228, 460, 652
EaeI	YGGCCR	2 cut(s)	300, 417
Eam1104I	CTCTTC	2 cut(s)	731, 829
EarI	CTCTTC	2 cut(s)	731, 829
EciI	GGCGGA	1 cut(s)	705
Eco130I	CCWWGG	1 cut(s)	493
Eco31I	GGTCTC	2 cut(s)	694, 703
Eco32I	GATATC	1 cut(s)	352
Eco47I	GGWCC	1 cut(s)	577
Eco47III	AGCGCT	1 cut(s)	159
Eco57I	CTGAAG	2 cut(s)	296, 755
EcoRI	GAATTC	1 cut(s)	871
EcoRII	CCWGG	1 cut(s)	252
EcoRV	GATATC	1 cut(s)	352
EcoT14I	CCWWGG	1 cut(s)	493
EcoT22I	ATGCAT	1 cut(s)	24
EgeI	GGCGCC	1 cut(s)	475
EheI	GGCGCC	1 cut(s)	475
ErhI	CCWWGG	1 cut(s)	493
Esp3I	CGTCTC	1 cut(s)	108
FaeI	CATG	2 cut(s)	1024, 1058
FaiI	YATR	6 cut(s)	330, 393, 549, 921, 1022, 1056
FalI	AAGNNNNNCTT	2 cut(s)	428, 460
FaqI	GGGAC	1 cut(s)	590
FatI	CATG	2 cut(s)	1020, 1054
FauI	CCCGC	3 cut(s)	31, 179, 750
FbaI	TGATCA	1 cut(s)	460
FokI	GGATG	2 cut(s)	760, 988
FspBI	CTAG	2 cut(s)	155, 1126
GlaI	GCGC	5 cut(s)	123, 159, 214, 475, 891
GsaI	CCCAGC	2 cut(s)	756, 1033
GsuI	CTGGAG	3 cut(s)	223, 275, 1055
HaeII	RGCGCY	2 cut(s)	161, 477
HaeIII	GGCC	5 cut(s)	302, 419, 430, 442, 742
HapII	CCGG	7 cut(s)	29, 53, 420, 527, 569, 656, 695
HgaI	GACGC	1 cut(s)	45
HhaI	GCGC	5 cut(s)	124, 160, 215, 476, 892
Hin1I	GRCGYC	2 cut(s)	56, 474
Hin1II	CATG	2 cut(s)	1024, 1058
Hin6I	GCGC	5 cut(s)	122, 158, 213, 474, 890
HinP1I	GCGC	5 cut(s)	122, 158, 213, 474, 890
HindIII	AAGCTT	1 cut(s)	455
HinfI	GANTC	5 cut(s)	128, 369, 553, 668, 674
HpaII	CCGG	7 cut(s)	29, 53, 420, 527, 569, 656, 695
HphI	GGTGA	4 cut(s)	18, 97, 775, 1079
Hpy188I	TCNGA	7 cut(s)	78, 108, 176, 558, 581, 673, 730
Hpy188III	TCNNGA	1 cut(s)	1021
Hpy99I	CGWCG	5 cut(s)	17, 61, 118, 169, 220
HpyAV	CCTTC	2 cut(s)	286, 625
HpyCH4III	ACNGT	4 cut(s)	74, 85, 91, 379
HpyCH4V	TGCA	7 cut(s)	22, 360, 628, 938, 946, 1003, 1012
HpyF10VI	GCNNNNNNNGC	8 cut(s)	130, 166, 625, 739, 898, 935, 1009, 1051
HpyF3I	CTNAG	7 cut(s)	105, 260, 483, 540, 642, 729, 902
Hsp92I	GRCGYC	2 cut(s)	56, 474
Hsp92II	CATG	2 cut(s)	1024, 1058
HspAI	GCGC	5 cut(s)	122, 158, 213, 474, 890
KasI	GGCGCC	1 cut(s)	473
KpnI	GGTACC	2 cut(s)	253, 492
Ksp22I	TGATCA	1 cut(s)	460
Kzo9I	GATC	4 cut(s)	47, 228, 460, 652
LmnI	GCTCC	3 cut(s)	42, 204, 256
LweI	GCATC	1 cut(s)	9
MaeI	CTAG	2 cut(s)	155, 1126
MaeIII	GTNAC	1 cut(s)	85
MalI	GATC	4 cut(s)	49, 230, 462, 654
MbiI	CCGCTC	1 cut(s)	45
MboI	GATC	4 cut(s)	47, 228, 460, 652
MboII	GAAGA	8 cut(s)	394, 397, 421, 669, 748, 846, 865, 1036
MflI	RGATCY	2 cut(s)	47, 652
MhlI	GDGCHC	1 cut(s)	927
MluCI	AATT	2 cut(s)	871, 884
Mly113I	GGCGCC	1 cut(s)	474
MlyI	GAGTC	1 cut(s)	137
MmeI	TCCRAC	3 cut(s)	56, 378, 975
Mph1103I	ATGCAT	1 cut(s)	24
MspA1I	CMGCKG	3 cut(s)	183, 625, 1033
MspI	CCGG	7 cut(s)	29, 53, 420, 527, 569, 656, 695
MspR9I	CCNGG	2 cut(s)	254, 528
Mva1269I	GAATGC	4 cut(s)	22, 570, 1014, 1078
MvaI	CCWGG	1 cut(s)	254
MvnI	CGCG	1 cut(s)	215
MwoI	GCNNNNNNNGC	8 cut(s)	130, 166, 625, 739, 898, 935, 1009, 1051
NarI	GGCGCC	1 cut(s)	474
NciI	CCSGG	1 cut(s)	528
NdeII	GATC	4 cut(s)	47, 228, 460, 652
NlaIII	CATG	2 cut(s)	1024, 1058
NlaIV	GGNNCC	8 cut(s)	99, 251, 272, 475, 490, 522, 578, 654
NmeAIII	GCCGAG	4 cut(s)	87, 456, 768, 955
NmuCI	GTSAC	1 cut(s)	85
NsiI	ATGCAT	1 cut(s)	24
NspV	TTCGAA	1 cut(s)	450
PagI	TCATGA	1 cut(s)	1020
PaqCI	CACCTGC	1 cut(s)	940
PcsI	WCGNNNNNNNCGW	1 cut(s)	65
PctI	GAATGC	4 cut(s)	22, 570, 1014, 1078
PfeI	GAWTC	4 cut(s)	369, 553, 668, 674
PinAI	ACCGGT	1 cut(s)	28
PleI	GAGTC	1 cut(s)	136
PluTI	GGCGCC	1 cut(s)	477
PpsI	GAGTC	1 cut(s)	136
Psp6I	CCWGG	1 cut(s)	252
PspFI	CCCAGC	2 cut(s)	752, 1029
PspGI	CCWGG	1 cut(s)	252
PspN4I	GGNNCC	8 cut(s)	99, 251, 272, 475, 490, 522, 578, 654
PspPI	GGNCC	3 cut(s)	428, 441, 577
PsrI	GAACNNNNNNTAC	2 cut(s)	481, 513
PstI	CTGCAG	2 cut(s)	630, 948
PstNI	CAGNNNCTG	1 cut(s)	625
PsuI	RGATCY	2 cut(s)	47, 652
PvuII	CAGCTG	2 cut(s)	625, 1033
RsaI	GTAC	2 cut(s)	251, 490
RsaNI	GTAC	2 cut(s)	250, 489
Sau3AI	GATC	4 cut(s)	47, 228, 460, 652
Sau96I	GGNCC	3 cut(s)	428, 441, 577
SchI	GAGTC	1 cut(s)	137
ScrFI	CCNGG	2 cut(s)	254, 528
SduI	GDGCHC	1 cut(s)	927
SfaNI	GCATC	1 cut(s)	9
SfcI	CTRYAG	2 cut(s)	626, 944
SfoI	GGCGCC	1 cut(s)	475
SfuI	TTCGAA	1 cut(s)	450
SgrAI	CRCCGGYG	1 cut(s)	28
SinI	GGWCC	1 cut(s)	577
SmlI	CTYRAG	1 cut(s)	1049
SmoI	CTYRAG	1 cut(s)	1049
Sse9I	AATT	2 cut(s)	871, 884
SspDI	GGCGCC	1 cut(s)	473
SspMI	CTAG	2 cut(s)	155, 1126
StyD4I	CCNGG	2 cut(s)	252, 526
StyI	CCWWGG	1 cut(s)	493
TaaI	ACNGT	4 cut(s)	74, 85, 91, 379
TaqI	TCGA	4 cut(s)	231, 372, 407, 450
TasI	AATT	2 cut(s)	871, 884
TauI	GCSGC	4 cut(s)	122, 136, 186, 526
TfiI	GAWTC	4 cut(s)	369, 553, 668, 674
TscAI	CASTG	4 cut(s)	293, 362, 382, 484
TseFI	GTSAC	1 cut(s)	85
Tsp45I	GTSAC	1 cut(s)	85
TspDTI	ATGAA	3 cut(s)	992, 1009, 1037
TspGWI	ACGGA	1 cut(s)	90
TspRI	CASTG	4 cut(s)	293, 362, 382, 484
VpaK11BI	GGWCC	1 cut(s)	577
XapI	RAATTY	1 cut(s)	871
XspI	CTAG	2 cut(s)	155, 1126
Zsp2I	ATGCAT	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.