FvH4_6g42280

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
33014123 .. 33015232
1110 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g42280.t1

Sequence Viewer

Length: 333 bp
ATGGCTAGAAATTATTTTGTTGTTGGTGGTGGTGGTCATGGAGTGGGAGTAGGTCTCAGTATTTTGGCAGACAACTCTGGCGGCCTGCTTTTGGTTGGCATGGTTCTTATGTCTCTCTCACTCATATCGATGGTCATATTTGCTTGTGGATCATCAAGCAAGAAAAGGAGGGGTGGCGGTGGTGGAGGAGGCGGTTGTGGTGGTGGTGGTGATGGTGGTGGCGGTGGTGGTTGTGGAGGAGGTGGTGGTGATGTTGGTGGCGGTGGTGGTTGTGGAGGAGGTGGAGGTGGTGGTGGTGGTGGTGGTTGTGGAGGAGGTGGTGGTGGTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

111

Amino Acids

9.2

Weight (kDa)

8.3

Isoelectric Point (pI)

74.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 81, 177, 192, 222, 261
AclWI GGATC 1 cut(s) 157
AfiI CCNNNNNNNGG 1 cut(s) 91
Alw26I GTCTC 2 cut(s) 59, 117
AlwI GGATC 1 cut(s) 157
AoxI GGCC 1 cut(s) 82
AsuHPI GGTGA 2 cut(s) 221, 260
BccI CCATC 2 cut(s) 124, 206
BcoDI GTCTC 2 cut(s) 59, 117
BfaI CTAG 1 cut(s) 6
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
BplI GAGNNNNNCTC 2 cut(s) 39, 71
Bsa29I ATCGAT 1 cut(s) 128
BsaI GGTCTC 1 cut(s) 59
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 1 cut(s) 91
BseCI ATCGAT 1 cut(s) 128
BseLI CCNNNNNNNGG 1 cut(s) 91
BseMII CTCAG 1 cut(s) 70
BseRI GAGGAG 4 cut(s) 201, 252, 291, 327
BshFI GGCC 1 cut(s) 84
BshVI ATCGAT 1 cut(s) 128
BslI CCNNNNNNNGG 1 cut(s) 91
BsmAI GTCTC 2 cut(s) 59, 117
BsnI GGCC 1 cut(s) 84
Bso31I GGTCTC 1 cut(s) 59
Bsp143I GATC 1 cut(s) 149
BspACI CCGC 5 cut(s) 81, 177, 192, 222, 261
BspANI GGCC 1 cut(s) 84
BspCNI CTCAG 1 cut(s) 69
BspDI ATCGAT 1 cut(s) 128
BspPI GGATC 1 cut(s) 157
BspTNI GGTCTC 1 cut(s) 59
BssMI GATC 1 cut(s) 149
BstC8I GCNNGC 1 cut(s) 86
BstDEI CTNAG 1 cut(s) 56
BstKTI GATC 1 cut(s) 152
BstMAI GTCTC 2 cut(s) 59, 117
BstMBI GATC 1 cut(s) 149
Bsu15I ATCGAT 1 cut(s) 128
BsuRI GGCC 1 cut(s) 84
BsuTUI ATCGAT 1 cut(s) 128
Cac8I GCNNGC 1 cut(s) 86
ClaI ATCGAT 1 cut(s) 128
CviAII CATG 2 cut(s) 38, 100
CviJI RGCY 2 cut(s) 5, 84
CviKI_1 RGCY 2 cut(s) 5, 84
DdeI CTNAG 1 cut(s) 56
DpnI GATC 1 cut(s) 151
DpnII GATC 1 cut(s) 149
Eco31I GGTCTC 1 cut(s) 59
FaeI CATG 2 cut(s) 41, 103
FaiI YATR 5 cut(s) 39, 101, 110, 125, 137
FatI CATG 2 cut(s) 37, 99
Fnu4HI GCNGC 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 1 cut(s) 6
GluI GCNGC 1 cut(s) 82
HaeIII GGCC 1 cut(s) 84
Hin1II CATG 2 cut(s) 41, 103
HphI GGTGA 2 cut(s) 221, 260
HpyF3I CTNAG 1 cut(s) 56
Hsp92II CATG 2 cut(s) 41, 103
Kzo9I GATC 1 cut(s) 149
LpnPI CCDG 2 cut(s) 63, 98
MaeI CTAG 1 cut(s) 6
MalI GATC 1 cut(s) 151
MboI GATC 1 cut(s) 149
MluCI AATT 1 cut(s) 10
MslI CAYNNNNRTG 1 cut(s) 128
NdeII GATC 1 cut(s) 149
NlaIII CATG 2 cut(s) 41, 103
PkrI GCNGC 1 cut(s) 83
RseI CAYNNNNRTG 1 cut(s) 128
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 1 cut(s) 149
SetI ASST 5 cut(s) 55, 244, 283, 289, 319
SgeI CNNG 8 cut(s) 18, 50, 90, 97, 112, 156, 168, 172
SmiMI CAYNNNNRTG 1 cut(s) 128
Sse9I AATT 1 cut(s) 10
SsiI CCGC 5 cut(s) 81, 177, 192, 222, 261
SspMI CTAG 1 cut(s) 6
TaqI TCGA 1 cut(s) 128
TasI AATT 1 cut(s) 10
TauI GCSGC 1 cut(s) 84
XspI CTAG 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.