RLG00000019105

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
46523513 .. 46523857
345 bp
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UTR
Exon/CDS
Intron
RLM00000019105

Sequence Viewer

Length: 345 bp
ATGGCTAGAAATTATTTTGTTGTTGGTGGTGGGGGTCATGGAGTGGGAGTAGGTCTCAATATCTTAGCAGACAACTTGGGCGGCCTGCTTTTGGTTTGCACGGTTCTCTCGTCTCTCTCACTCATATCGATGGTCATATTTGCTTGTGGATCAAGCAAGAAAAGGCGCAGGGGCGGTGGTGGCGGCGGTGATGGTGGCGGTTGTGGTGGCGGCGGTTGTGGTGGCGGCGGTGATGGCGGCGGAGGTGGTGGTTGTGGAGGTGGTGGTGGTGGTGGTGGTTGTGGAGGTGGTGGTGGTGGAGGTGGTGGTTGTGGAGGGGGTGGTGGTGGAGGTGGTGGTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

115

Amino Acids

9.52

Weight (kDa)

8.51

Isoelectric Point (pI)

84.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 157
AfiI CCNNNNNNNGG 1 cut(s) 91
Alw26I GTCTC 2 cut(s) 59, 117
AlwI GGATC 1 cut(s) 157
AoxI GGCC 1 cut(s) 82
AspLEI GCGC 1 cut(s) 168
AsuHPI GGTGA 2 cut(s) 200, 242
BccI CCATC 3 cut(s) 124, 185, 227
BcoDI GTCTC 2 cut(s) 59, 117
BfaI CTAG 1 cut(s) 6
BisI GCNGC 5 cut(s) 82, 184, 211, 226, 238
BlsI GCNGC 5 cut(s) 83, 185, 212, 227, 239
BplI GAGNNNNNCTC 2 cut(s) 39, 71
Bsa29I ATCGAT 1 cut(s) 128
BsaI GGTCTC 1 cut(s) 59
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 1 cut(s) 91
BseCI ATCGAT 1 cut(s) 128
BseLI CCNNNNNNNGG 1 cut(s) 91
BshFI GGCC 1 cut(s) 84
BshVI ATCGAT 1 cut(s) 128
BslI CCNNNNNNNGG 1 cut(s) 91
BsmAI GTCTC 2 cut(s) 59, 117
BsmBI CGTCTC 1 cut(s) 117
BsnI GGCC 1 cut(s) 84
Bso31I GGTCTC 1 cut(s) 59
Bsp143I GATC 1 cut(s) 149
BspANI GGCC 1 cut(s) 84
BspDI ATCGAT 1 cut(s) 128
BspPI GGATC 1 cut(s) 157
BspTNI GGTCTC 1 cut(s) 59
BssMI GATC 1 cut(s) 149
Bst4CI ACNGT 1 cut(s) 103
BstC8I GCNNGC 1 cut(s) 86
BstDEI CTNAG 1 cut(s) 64
BstHHI GCGC 1 cut(s) 168
BstKTI GATC 1 cut(s) 152
BstMAI GTCTC 2 cut(s) 59, 117
BstMBI GATC 1 cut(s) 149
BstMWI GCNNNNNNNGC 2 cut(s) 180, 234
Bsu15I ATCGAT 1 cut(s) 128
BsuRI GGCC 1 cut(s) 84
BsuTUI ATCGAT 1 cut(s) 128
Cac8I GCNNGC 1 cut(s) 86
CfoI GCGC 1 cut(s) 168
ClaI ATCGAT 1 cut(s) 128
CviAII CATG 1 cut(s) 38
CviJI RGCY 2 cut(s) 5, 84
CviKI_1 RGCY 2 cut(s) 5, 84
DdeI CTNAG 1 cut(s) 64
DpnI GATC 1 cut(s) 151
DpnII GATC 1 cut(s) 149
EciI GGCGGA 1 cut(s) 255
Eco31I GGTCTC 1 cut(s) 59
Esp3I CGTCTC 1 cut(s) 117
FaeI CATG 1 cut(s) 41
FaiI YATR 3 cut(s) 39, 125, 137
FatI CATG 1 cut(s) 37
Fnu4HI GCNGC 5 cut(s) 82, 184, 211, 226, 238
Fsp4HI GCNGC 5 cut(s) 82, 184, 211, 226, 238
FspBI CTAG 1 cut(s) 6
GlaI GCGC 1 cut(s) 167
GluI GCNGC 5 cut(s) 82, 184, 211, 226, 238
HaeIII GGCC 1 cut(s) 84
HhaI GCGC 1 cut(s) 168
Hin1II CATG 1 cut(s) 41
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HphI GGTGA 2 cut(s) 200, 242
HpyCH4III ACNGT 1 cut(s) 103
HpyCH4V TGCA 1 cut(s) 99
HpyF10VI GCNNNNNNNGC 2 cut(s) 180, 234
HpyF3I CTNAG 1 cut(s) 64
Hsp92II CATG 1 cut(s) 41
HspAI GCGC 1 cut(s) 166
Kzo9I GATC 1 cut(s) 149
LpnPI CCDG 2 cut(s) 98, 154
MaeI CTAG 1 cut(s) 6
MalI GATC 1 cut(s) 151
MboI GATC 1 cut(s) 149
MluCI AATT 1 cut(s) 10
MnlI CCTC 6 cut(s) 236, 251, 278, 293, 308, 323
MslI CAYNNNNRTG 1 cut(s) 128
MwoI GCNNNNNNNGC 2 cut(s) 180, 234
NdeII GATC 1 cut(s) 149
NlaIII CATG 1 cut(s) 41
PcsI WCGNNNNNNNCGW 1 cut(s) 107
PkrI GCNGC 5 cut(s) 83, 185, 212, 227, 239
RseI CAYNNNNRTG 1 cut(s) 128
SatI GCNGC 5 cut(s) 82, 184, 211, 226, 238
Sau3AI GATC 1 cut(s) 149
SetI ASST 6 cut(s) 55, 247, 262, 289, 304, 334
SmiMI CAYNNNNRTG 1 cut(s) 128
Sse9I AATT 1 cut(s) 10
SspMI CTAG 1 cut(s) 6
TaaI ACNGT 1 cut(s) 103
TaqI TCGA 1 cut(s) 128
TasI AATT 1 cut(s) 10
TauI GCSGC 5 cut(s) 84, 186, 213, 228, 240
XspI CTAG 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.