Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003325

Physical Location & Seq

Genomic Coordinates Reverse (-)

34572044 .. 34574522

Gene Structure 2479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g45000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAGAAGAAGAACCCTCCTCCTCCATCTCAGAGCTTCCTCATCAACCCATTTCCTTCCTCCATGTCCTCCTCTCTCCTACACCAATGTTGGGTCTTCATCAAAAGCCTCAACCTTTCATTCCACGTCAACTTCCGCCTCAAACTCCAGGTGGGTCGCCGTCACCAACTCTCTTCCTCCACCCGAATGGGTCGAGCCTTTCCATGACGTCTCCGACGTCATCTCCAGCCCCCACCGCTTCGACCCTTCTCCGTGGGTCCCCCAAATCCTTAATCTTCTAGACAACAACTCCCCCCAAATGGAACACAACTTAGACTCTTACTGCCGCAAGTTCCTCATCAAGTTGTCTCCCAACTTCGTTGCTTATGTCTTGAAATCCGACAACCTTAGAGATAAACCCGAGACTGCCCTCCGGTTCTTCTCATGGGCAAGTAAGCAACACAAGTACCATCATAAGCTTGAGTGCTATGTTTGTTTGATTGAGATTTTGTGTTTGTGTGGTGAATTGGATAGTGTTAAATGTGTTGTTAATGAGCTTAGGGAGATGAGGTTGTTGATGAATGCGAATGCCGCAAATAGTTTGGTTAAGAGTTTTGGGAGTGTTGGAATGGTGGAGGAGTTGTTGTGGGTTTGGCGTGGGATGAAGGAGAATGGGATTGAGCCTAGTTTGTTTACTTATAATTTTTTGGTGAATGGTTTGGTGAACTCGATGTTCATTGAATCCGCGGAGAGGGTTTTCGAGGTAATGGAAGGTGGGAAGATTGTGCCTGACATTGTGACTTATAATACAATGATTAAAGGGTATTGTAAGGCAGGGAGAACGCCGAAGGCGATGGAGAAGTTTAGGAGTATGGAGGGGAGGAATGTGGAGGCGGATAAGATTACGTATATGACTTTGATGCAGGGGTGTTATTCGGAAGGGGATTTCGATTCTTGTTTGAGTCTTTACCAGGAGATGAGGGAGAAGAGGGTTGAGGTTCCATCTCACGCGTATAGTTTAGTTATCAATGGGCTTTGTAAAGGGGGGAAATGTGTGGTGGGGTTTGCTGTTTTTGAAGATATGATTCAGAAGGGTTGTAAAGCTAATGTGGCAAACTATACGGCTTTGATTGATTCATATGCAAAATGCGGGTGCATTGAAGAGGCGATGAAGCTATTCGAGAGGATGAAGAGTGACGGGCTTGAACCAGATGGGGTTACTTATGGGGTTATTGTCAATGGATTGTGTAAGAGTGGGAGAGTGGAGGAGGCCATTGAGTATTTTCAGTTTTGTCAAGACAGCAGAATGGCAGACAATGCTATGTTGTATTCTAGTTTAATTGATGGTCTTGGGAAGGCTGGAAGGGTTGATGAAGCTGAAAGGTTGTTTGAAAAGATGATCGAAAAGGGTTGTCCACCGGACTCATATTGCTACAATGCGCTTATCGACGCCCTAGCAAAATGTGGAAAAACTGATGAAGCTTTAGCACTCTTTAAGAAAATGGAAGAAGAAGGGTGTGATCAGACTGTTTATACATACACAATACTCATTGATGGACTATTTAAGGAGCATAGGAATGAAGATGCATTGAAGTTATGGGACATGATGATTGATAAGGGCATCACGCCTACTGCTGCTTCGTTCAGAGCTCTCTCAATTGGGCTTTGTCTCTCAGGCAAGGTAGCCAGGGCCTGCAAAATTTTGGATGACCTAGCACCAATGGGTGTAATTCCTGAGACAGCTTTTGAAGATATGATCAATGTGTTGTGCAAAGCTGGCCGTGTCAAGGAAGCTTGTAAATTGGCTGATGGCATTGTGGATAGAGGTAGGGAAATACCAGGAAGAATCCGAACCATTCTAATCAATGCCTTGAGGAAAACAGGCAATGCAGATTTAGCTATGAAGCTGATGCATAGTAAGATCGGTATTGGGTATGACCGATGGGGTAGTGTCAAAAAACGAGTGAAGTTCCGTATTCTCATTGACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

657

Amino Acids

73.54

Weight (kDa)

7.11

Isoelectric Point (pI)

38.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	190 - 235	4.5e-07	PPR repeat family
PPR_1	PF12854	254 - 285	4e-12	PPR repeat
PPR_2	PF13041	256 - 303	4.4e-15	PPR repeat family
PPR	PF01535	259 - 289	1.1e-08	PPR repeat
PPR_2	PF13041	292 - 340	2.3e-10	PPR repeat family
PPR_long	PF17177	299 - 419	1.4e-12	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	348 - 458	1.1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	350 - 406	2.9e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	357 - 390	5.3e-08	PPR repeat
PPR_2	PF13041	362 - 410	1.6e-15	PPR repeat family
PPR	PF01535	366 - 394	3.1e-09	PPR repeat
PPR_1	PF12854	392 - 421	2.9e-09	PPR repeat
PPR_1	PF12854	432 - 459	3.5e-09	PPR repeat
PPR_2	PF13041	432 - 480	6.7e-15	PPR repeat family
PPR	PF01535	436 - 464	1.5e-09	PPR repeat
PPR_3	PF13812	454 - 510	8.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	462 - 495	6e-11	PPR repeat
PPR_2	PF13041	466 - 515	7.8e-17	PPR repeat family
PPR	PF01535	470 - 499	8.8e-10	PPR repeat
PPR_1	PF12854	498 - 529	5.1e-07	PPR repeat
PPR_2	PF13041	503 - 549	1.9e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03560
fragaria_vesca	FvH4_6g45000
malus_domestica	MD09G1090900.v1.1 MD17G1080900.v1.1
prunus_persica	Prupe.3G234000_v2.0.a1 Prupe.3G234000_v2.0.a1
pyrus_communis	pycom03g08050 pycom09g01610 pycom17g07920
rosa_chinensis	RchiOBHm_Chr2g0162271 RchiOBHm_Chr2g0162281 RchiOBHm_Chr2g0162291 RchiOBHm_Chr4g0446301 RchiOBHm_Chr5g0064621
rosa_laevigata	RLG00000021332
rosa_multiflora	Rmu_sc0002266.1_g000005 Rmu_sc0007544.1_g000003 Rmu_sc0007544.1_g000004
rosa_roxburghii	Rroxscaffold_2G00088200 Rroxscaffold_5G00386740
rosa_rugosa	Rorug02G0496100 Rorug04G0369800 Rorug04G0369900
rosa_samantha	Rh2AG562100 Rh2BG575200 Rh2BG575300 Rh2CG545500 Rh2CG545600 Rh2DG585100 Rh4AG431700 Rh4BG441000 Rh4CG458300 Rh4DG439600 Rh5BG154600
rosa_wichuraiana	Rw2G046560 Rw4G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	678, 783
AatII	GACGTC	2 cut(s)	210, 219
AccII	CGCG	2 cut(s)	725, 989
AciI	CCGC	8 cut(s)	135, 235, 325, 570, 723, 725, 872, 1128
AcoI	YGGCCR	1 cut(s)	1756
AcsI	RAATTY	1 cut(s)	1677
AcyI	GRCGYC	3 cut(s)	207, 216, 1428
AfaI	GTAC	1 cut(s)	446
AfiI	CCNNNNNNNGG	4 cut(s)	90, 298, 729, 1765
AflIII	ACRYGT	1 cut(s)	987
AgsI	TTSAA	8 cut(s)	373, 719, 1055, 1139, 1184, 1370, 1570, 1727
AjiI	CACGTC	1 cut(s)	126
AjnI	CCWGG	4 cut(s)	146, 948, 1664, 1816
Alw21I	GWGCWC	1 cut(s)	1630
Alw26I	GTCTC	5 cut(s)	214, 351, 395, 1652, 1709
AlwNI	CAGNNNCTG	1 cut(s)	1671
Ama87I	CYCGRG	1 cut(s)	398
AoxI	GGCC	3 cut(s)	1248, 1668, 1756
ApeKI	GCWGC	1 cut(s)	1613
ApoI	RAATTY	1 cut(s)	1677
Asp700I	GAANNNNTTC	1 cut(s)	1154
AspLEI	GCGC	1 cut(s)	1420
AspS9I	GGNCC	2 cut(s)	256, 1668
AsuHPI	GGTGA	4 cut(s)	154, 512, 700, 712
AvaI	CYCGRG	1 cut(s)	398
AvaII	GGWCC	1 cut(s)	256
BaeI	ACNNNNGTAYC	2 cut(s)	428, 461
BanII	GRGCYC	1 cut(s)	1630
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	1630
BbvI	GCAGC	1 cut(s)	1600
BccI	CCATC	9 cut(s)	33, 456, 826, 988, 1184, 1316, 1526, 1781, 1914
BceAI	ACGGC	3 cut(s)	143, 1116, 1743
BciT130I	CCWGG	4 cut(s)	148, 950, 1666, 1818
BclI	TGATCA	2 cut(s)	1498, 1734
BcoDI	GTCTC	5 cut(s)	214, 351, 395, 1652, 1709
BfaI	CTAG	5 cut(s)	278, 663, 1311, 1433, 1691
BisI	GCNGC	3 cut(s)	325, 570, 1614
BlsI	GCNGC	3 cut(s)	326, 571, 1615
Bme1390I	CCNGG	4 cut(s)	148, 950, 1666, 1818
Bme18I	GGWCC	1 cut(s)	256
BmeT110I	CYCGRG	1 cut(s)	398
BmgBI	CACGTC	1 cut(s)	126
BmgT120I	GGNCC	2 cut(s)	256, 1668
BmiI	GGNNCC	3 cut(s)	257, 258, 978
BmrFI	CCNGG	4 cut(s)	148, 950, 1666, 1818
BmsI	GCATC	4 cut(s)	888, 1552, 1608, 1878
BpiI	GAAGAC	1 cut(s)	87
BpmI	CTGGAG	2 cut(s)	130, 208
Bpu10I	CCTNAGC	1 cut(s)	536
BpuEI	CTTGAG	2 cut(s)	479, 1870
BsaAI	YACGTR	1 cut(s)	885
BsaHI	GRCGYC	3 cut(s)	207, 216, 1428
BsaJI	CCNNGG	3 cut(s)	251, 723, 1665
BsaWI	WCCGGW	2 cut(s)	411, 1396
Bsc4I	CCNNNNNNNGG	4 cut(s)	90, 298, 729, 1765
Bse3DI	GCAATG	1 cut(s)	1870
BseBI	CCWGG	4 cut(s)	148, 950, 1666, 1818
BseDI	CCNNGG	3 cut(s)	251, 723, 1665
BseGI	GGATG	3 cut(s)	645, 1170, 1690
BseLI	CCNNNNNNNGG	4 cut(s)	90, 298, 729, 1765
BseMI	GCAATG	1 cut(s)	1870
BseMII	CTCAG	3 cut(s)	43, 1665, 1704
BseRI	GAGGAG	5 cut(s)	8, 11, 60, 629, 1259
BseXI	GCAGC	1 cut(s)	1600
Bsh1236I	CGCG	2 cut(s)	725, 989
BshFI	GGCC	3 cut(s)	1250, 1670, 1758
BsiHKAI	GWGCWC	1 cut(s)	1630
BsiHKCI	CYCGRG	1 cut(s)	398
BsiSI	CCGG	2 cut(s)	412, 1397
BslFI	GGGAC	2 cut(s)	242, 1592
BslI	CCNNNNNNNGG	4 cut(s)	90, 298, 729, 1765
BsmAI	GTCTC	5 cut(s)	214, 351, 395, 1652, 1709
BsmBI	CGTCTC	1 cut(s)	214
BsmFI	GGGAC	2 cut(s)	242, 1592
BsmI	GAATGC	2 cut(s)	565, 571
BsnI	GGCC	3 cut(s)	1250, 1670, 1758
BsoBI	CYCGRG	1 cut(s)	398
Bsp1286I	GDGCHC	1 cut(s)	1630
Bsp143I	GATC	4 cut(s)	1377, 1498, 1734, 1899
BspACI	CCGC	8 cut(s)	135, 235, 325, 570, 723, 725, 872, 1128
BspANI	GGCC	3 cut(s)	1250, 1670, 1758
BspCNI	CTCAG	3 cut(s)	42, 1664, 1705
BspFNI	CGCG	2 cut(s)	725, 989
BspLI	GGNNCC	3 cut(s)	257, 258, 978
BsrDI	GCAATG	1 cut(s)	1870
BssECI	CCNNGG	3 cut(s)	251, 723, 1665
BssMI	GATC	4 cut(s)	1377, 1498, 1734, 1899
BssNI	GRCGYC	3 cut(s)	207, 216, 1428
Bst2UI	CCWGG	4 cut(s)	148, 950, 1666, 1818
Bst4CI	ACNGT	1 cut(s)	1507
Bst6I	CTCTTC	4 cut(s)	177, 959, 1134, 1163
BstACI	GRCGYC	3 cut(s)	207, 216, 1428
BstAPI	GCANNNNNTGC	1 cut(s)	1295
BstBAI	YACGTR	1 cut(s)	885
BstC8I	GCNNGC	2 cut(s)	1672, 1756
BstDEI	CTNAG	6 cut(s)	29, 310, 386, 536, 1651, 1713
BstDSI	CCRYGG	2 cut(s)	251, 723
BstF5I	GGATG	3 cut(s)	645, 1170, 1690
BstFNI	CGCG	2 cut(s)	725, 989
BstHHI	GCGC	1 cut(s)	1420
BstKTI	GATC	4 cut(s)	1380, 1501, 1737, 1902
BstMAI	GTCTC	5 cut(s)	214, 351, 395, 1652, 1709
BstMBI	GATC	4 cut(s)	1377, 1498, 1734, 1899
BstMWI	GCNNNNNNNGC	6 cut(s)	234, 569, 1088, 1295, 1755, 1874
BstNI	CCWGG	4 cut(s)	148, 950, 1666, 1818
BstSCI	CCNGG	4 cut(s)	146, 948, 1664, 1816
BstSNI	TACGTA	1 cut(s)	885
BstUI	CGCG	2 cut(s)	725, 989
BstV1I	GCAGC	1 cut(s)	1600
BstV2I	GAAGAC	1 cut(s)	87
BstXI	CCANNNNNNTGG	1 cut(s)	186
BsuRI	GGCC	3 cut(s)	1250, 1670, 1758
BtgI	CCRYGG	2 cut(s)	251, 723
BtgZI	GCGATG	2 cut(s)	845, 1160
BtrI	CACGTC	1 cut(s)	126
BtsCI	GGATG	3 cut(s)	645, 1170, 1690
Cac8I	GCNNGC	2 cut(s)	1672, 1756
CaiI	CAGNNNCTG	1 cut(s)	1671
CfoI	GCGC	1 cut(s)	1420
Cfr13I	GGNCC	2 cut(s)	256, 1668
Cfr42I	CCGCGG	1 cut(s)	726
CseI	GACGC	1 cut(s)	1436
Csp6I	GTAC	1 cut(s)	445
CviAII	CATG	4 cut(s)	63, 203, 423, 1582
CviQI	GTAC	1 cut(s)	445
DdeI	CTNAG	6 cut(s)	29, 310, 386, 536, 1651, 1713
DpnI	GATC	4 cut(s)	1379, 1500, 1736, 1901
DpnII	GATC	4 cut(s)	1377, 1498, 1734, 1899
EaeI	YGGCCR	1 cut(s)	1756
Eam1104I	CTCTTC	4 cut(s)	177, 959, 1134, 1163
EarI	CTCTTC	4 cut(s)	177, 959, 1134, 1163
EciI	GGCGGA	2 cut(s)	124, 887
Ecl136II	GAGCTC	1 cut(s)	1628
Eco105I	TACGTA	1 cut(s)	885
Eco24I	GRGCYC	1 cut(s)	1630
Eco47I	GGWCC	1 cut(s)	256
Eco53kI	GAGCTC	1 cut(s)	1628
Eco88I	CYCGRG	1 cut(s)	398
EcoICRI	GAGCTC	1 cut(s)	1628
EcoO109I	RGGNCCY	2 cut(s)	256, 1668
EcoRII	CCWGG	4 cut(s)	146, 948, 1664, 1816
EcoT22I	ATGCAT	2 cut(s)	1567, 1893
EcoT38I	GRGCYC	1 cut(s)	1630
Esp3I	CGTCTC	1 cut(s)	214
FaeI	CATG	4 cut(s)	66, 206, 426, 1585
FaqI	GGGAC	2 cut(s)	242, 1592
FatI	CATG	4 cut(s)	62, 202, 422, 1581
FauI	CCCGC	1 cut(s)	1121
FauNDI	CATATG	1 cut(s)	1117
FbaI	TGATCA	2 cut(s)	1498, 1734
Fnu4HI	GCNGC	3 cut(s)	325, 570, 1614
FokI	GGATG	3 cut(s)	652, 1177, 1697
FriOI	GRGCYC	1 cut(s)	1630
Fsp4HI	GCNGC	3 cut(s)	325, 570, 1614
FspBI	CTAG	5 cut(s)	278, 663, 1311, 1433, 1691
GlaI	GCGC	1 cut(s)	1419
GluI	GCNGC	3 cut(s)	325, 570, 1614
GsuI	CTGGAG	2 cut(s)	130, 208
HaeIII	GGCC	3 cut(s)	1250, 1670, 1758
HapII	CCGG	2 cut(s)	412, 1397
HgaI	GACGC	1 cut(s)	1436
HhaI	GCGC	1 cut(s)	1420
Hin1I	GRCGYC	3 cut(s)	207, 216, 1428
Hin1II	CATG	4 cut(s)	66, 206, 426, 1585
Hin6I	GCGC	1 cut(s)	1418
HinP1I	GCGC	1 cut(s)	1418
HincII	GTYRAC	1 cut(s)	129
HindII	GTYRAC	1 cut(s)	129
HindIII	AAGCTT	3 cut(s)	455, 1458, 1770
HinfI	GANTC	8 cut(s)	314, 719, 929, 940, 1063, 1112, 1400, 1824
HpaII	CCGG	2 cut(s)	412, 1397
HphI	GGTGA	4 cut(s)	154, 512, 700, 712
Hpy166II	GTNNAC	4 cut(s)	129, 672, 703, 1394
Hpy188I	TCNGA	8 cut(s)	32, 214, 379, 916, 1068, 1503, 1625, 1829
Hpy188III	TCNNGA	5 cut(s)	278, 370, 1159, 1274, 1712
Hpy8I	GTNNAC	4 cut(s)	129, 672, 703, 1394
Hpy99I	CGWCG	2 cut(s)	218, 1430
HpyCH4III	ACNGT	1 cut(s)	1507
HpyCH4IV	ACGT	4 cut(s)	125, 207, 216, 884
HpyCH4V	TGCA	8 cut(s)	901, 1121, 1134, 1565, 1674, 1749, 1868, 1891
HpyF10VI	GCNNNNNNNGC	6 cut(s)	234, 569, 1088, 1295, 1755, 1874
HpyF3I	CTNAG	6 cut(s)	29, 310, 386, 536, 1651, 1713
HpySE526I	ACGT	4 cut(s)	125, 207, 216, 884
Hsp92I	GRCGYC	3 cut(s)	207, 216, 1428
Hsp92II	CATG	4 cut(s)	66, 206, 426, 1585
HspAI	GCGC	1 cut(s)	1418
KflI	GGGWCCC	1 cut(s)	256
Ksp22I	TGATCA	2 cut(s)	1498, 1734
KspI	CCGCGG	1 cut(s)	726
Kzo9I	GATC	4 cut(s)	1377, 1498, 1734, 1899
LmnI	GCTCC	1 cut(s)	1546
Lsp1109I	GCAGC	1 cut(s)	1600
LweI	GCATC	4 cut(s)	888, 1552, 1608, 1878
MaeI	CTAG	5 cut(s)	278, 663, 1311, 1433, 1691
MaeII	ACGT	4 cut(s)	125, 207, 216, 884
MaeIII	GTNAC	4 cut(s)	160, 775, 1172, 1195
MalI	GATC	4 cut(s)	1379, 1500, 1736, 1901
MboI	GATC	4 cut(s)	1377, 1498, 1734, 1899
MfeI	CAATTG	1 cut(s)	1635
MhlI	GDGCHC	1 cut(s)	1630
MluCI	AATT	7 cut(s)	503, 679, 1317, 1635, 1677, 1707, 1778
MluI	ACGCGT	1 cut(s)	987
MlyI	GAGTC	3 cut(s)	308, 949, 1394
MmeI	TCCRAC	3 cut(s)	237, 402, 583
Mph1103I	ATGCAT	2 cut(s)	1567, 1893
MroXI	GAANNNNTTC	1 cut(s)	1154
MseI	TTAA	8 cut(s)	270, 516, 528, 585, 795, 1316, 1473, 1542
MslI	CAYNNNNRTG	2 cut(s)	184, 1554
MspA1I	CMGCKG	1 cut(s)	725
MspI	CCGG	2 cut(s)	412, 1397
MspR9I	CCNGG	4 cut(s)	148, 950, 1666, 1818
MunI	CAATTG	1 cut(s)	1635
Mva1269I	GAATGC	2 cut(s)	565, 571
MvaI	CCWGG	4 cut(s)	148, 950, 1666, 1818
MvnI	CGCG	2 cut(s)	725, 989
MwoI	GCNNNNNNNGC	6 cut(s)	234, 569, 1088, 1295, 1755, 1874
NdeI	CATATG	1 cut(s)	1117
NdeII	GATC	4 cut(s)	1377, 1498, 1734, 1899
NlaIII	CATG	4 cut(s)	66, 206, 426, 1585
NlaIV	GGNNCC	3 cut(s)	257, 258, 978
NmuCI	GTSAC	3 cut(s)	160, 775, 1172
NsiI	ATGCAT	2 cut(s)	1567, 1893
PcsI	WCGNNNNNNNCGW	2 cut(s)	213, 827
PctI	GAATGC	2 cut(s)	565, 571
PdmI	GAANNNNTTC	1 cut(s)	1154
PfeI	GAWTC	5 cut(s)	719, 929, 1063, 1112, 1824
PkrI	GCNGC	3 cut(s)	326, 571, 1615
PleI	GAGTC	3 cut(s)	308, 948, 1394
PpsI	GAGTC	3 cut(s)	308, 948, 1394
Ppu21I	YACGTR	1 cut(s)	885
PpuMI	RGGWCCY	1 cut(s)	256
PsiI	TTATAA	2 cut(s)	678, 783
Psp124BI	GAGCTC	1 cut(s)	1630
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	4 cut(s)	146, 948, 1664, 1816
PspGI	CCWGG	4 cut(s)	146, 948, 1664, 1816
PspN4I	GGNNCC	3 cut(s)	257, 258, 978
PspPI	GGNCC	2 cut(s)	256, 1668
PspPPI	RGGWCCY	1 cut(s)	256
PstNI	CAGNNNCTG	1 cut(s)	1671
RsaI	GTAC	1 cut(s)	446
RsaNI	GTAC	1 cut(s)	445
RseI	CAYNNNNRTG	2 cut(s)	184, 1554
SacI	GAGCTC	1 cut(s)	1630
SacII	CCGCGG	1 cut(s)	726
SaqAI	TTAA	8 cut(s)	270, 516, 528, 585, 795, 1316, 1473, 1542
SatI	GCNGC	3 cut(s)	325, 570, 1614
Sau3AI	GATC	4 cut(s)	1377, 1498, 1734, 1899
Sau96I	GGNCC	2 cut(s)	256, 1668
SchI	GAGTC	3 cut(s)	308, 949, 1394
ScrFI	CCNGG	4 cut(s)	148, 950, 1666, 1818
SduI	GDGCHC	1 cut(s)	1630
SfaNI	GCATC	4 cut(s)	888, 1552, 1608, 1878
Sfr303I	CCGCGG	1 cut(s)	726
SgrBI	CCGCGG	1 cut(s)	726
SinI	GGWCC	1 cut(s)	256
SmiMI	CAYNNNNRTG	2 cut(s)	184, 1554
SmlI	CTYRAG	2 cut(s)	458, 1849
SmoI	CTYRAG	2 cut(s)	458, 1849
SnaBI	TACGTA	1 cut(s)	885
Sse9I	AATT	7 cut(s)	503, 679, 1317, 1635, 1677, 1707, 1778
SsiI	CCGC	8 cut(s)	135, 235, 325, 570, 723, 725, 872, 1128
SspMI	CTAG	5 cut(s)	278, 663, 1311, 1433, 1691
SstI	GAGCTC	1 cut(s)	1630
StyD4I	CCNGG	4 cut(s)	146, 948, 1664, 1816
TaaI	ACNGT	1 cut(s)	1507
TaiI	ACGT	4 cut(s)	128, 210, 219, 887
TaqI	TCGA	8 cut(s)	192, 240, 707, 738, 927, 1158, 1380, 1425
TaqII	GACCGA	1 cut(s)	1932
TasI	AATT	7 cut(s)	503, 679, 1317, 1635, 1677, 1707, 1778
TauI	GCSGC	2 cut(s)	327, 572
TfiI	GAWTC	5 cut(s)	719, 929, 1063, 1112, 1824
Tru1I	TTAA	8 cut(s)	270, 516, 528, 585, 795, 1316, 1473, 1542
Tru9I	TTAA	8 cut(s)	270, 516, 528, 585, 795, 1316, 1473, 1542
TseFI	GTSAC	3 cut(s)	160, 775, 1172
TseI	GCWGC	1 cut(s)	1613
Tsp45I	GTSAC	3 cut(s)	160, 775, 1172
TspGWI	ACGGA	2 cut(s)	240, 1940
VpaK11BI	GGWCC	1 cut(s)	256
XapI	RAATTY	1 cut(s)	1677
XbaI	TCTAGA	1 cut(s)	277
XmnI	GAANNNNTTC	1 cut(s)	1154
XspI	CTAG	5 cut(s)	278, 663, 1311, 1433, 1691
ZraI	GACGTC	2 cut(s)	208, 217
Zsp2I	ATGCAT	2 cut(s)	1567, 1893

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.