MD17G1080900.v1.1

Pentatricopeptide repeat-containing protein At1g03560

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0003325
Physical Location & Seq
Forward (+)
6757250 .. 6760341
3092 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1080900.v1.1.491

Sequence Viewer

Length: 1965 bp
ATGAGAAGAACCCTACTGAGAGCCCCCCTATCACTTTCAGCAGCCCGTATTCTTCCTCCAAGACCTCCCCGTCCGTACATCCATGGAGGGTCTTCGTCGAAAGCTTCAAATTCTCACTGTACGTCAAGTTTCAGCTCAAATTCCAGGTGGGTTTTCACCAACTCTCTCCCTCCTCCCGAATGGGTAGAACCTTTCAATGACGTCTCTGATGTAGTATCGAACACACAAAATTTTGACCCATCTCCGTGGGTCGCTCAAATTGTGAATCTTTTAGATGGGTCCCCTACGATGGAGGCCAATTTAGACTCTTACTGTCGCACATTCTTGATCAAATTGTCTCCTAATTTTGTTTCGTATGTGTTGAAATCTTATGAGCTTCGTGGGAAGCCCAAAACCGCCTTGCGGTTCTTTGCTTGGGCTGGTAGCCAGAAGAAGTATCATCATAAGCTTGACTGCTATGTATCTTTGATTGAACTTTTATCTGTGTGTCGTGATTTGGACCGTATTCGATGTGTACTTGTTAAGCTTAAAGAAATGAACTTTTTGATGACTTCTTCGGCGGCAAATTCATTGATTAAAAGCTTTGGATGTCTTGGAATGGTTGATGAGCTGTTGTGGGTTTGGCGTCGAATGAAGGAGAATGAGATTGAGCCTAGTTTGTACACTTATAACTTTTTACTGAATGGTTTGGTGAATTCGATGTTTATTGAATCGGCTGAGCGGGTTTTTGAGGTTATGGAAGTCGGGAAAATTGCACCGGACATTGTGACTTATAATACAATGATTAAAGGGTATTGTAAGGGAGGGAAAACCCAGAAAGCAATGGAGAAGTTCAGAGCTATGGAGGGGAGGAATGTGGAACCTGATAAGATTACTTACATGACTTTAATACAGGGGTGTTATTCAGAAGGAGATGTTGATTCGTGTTTGGGTCTTTACCAAGAAATGGAAGAGAAAGGACTTGAAATTCCACCTCATGCGTATAGTTTAGTGATCAACGGGCTTTGCAAAGGTGGGAAATGTATGGAAGGATATGCCGTTTTTGAACATATGATTCAGAAGGGATGTAAAGCCAATGTGGCAAACTATACAGCATTGATCAATTCATATGTGAAATGTGGGAGCATTGAGAAGGCAATGAAGCTTTTCGAGAGGATGAAAAATGACGGGCTTGAACCAGATGAGGTCACTTACGGGGTTATCGTCAATGGATTGTGTAAGAGTGGGAGAGTGGAGGAGGCAATGGAGTACTTTGCCTTTTGTGAAGGCAGGGGGATGGCAGTTAATGCTATGTTTTATTCTAGTCTAATCGATGGTCTTGGAAAAGCAGGGAGGCTTGATGAGGCTGAAAGGCTCTTTGAAAAGATGGTAGTGAAGGGATGTCCACAGGATTCATACTGCTATAATGCCCTTATCGATGCCCTAGCTAAATGTGGAAAAGCTGATGAAGCATTAGCACTCTTTAAGAAAATGGAAGAGGAAGGTTGTGATCAGACAGTTTATACATACACAATACTCATCAGCGGACTTTTTAAGGAGCACAGAAATGAAGAGGCATTGAAGCTCTGGGACACGATGATTGATAAGGGCATCACACCGAATGTTGCTTCCTTCAGGGCCCTCTCTATTGGGCTTTGTCTCTCAGGCAAGGTAGCGAGAGCCTGCAAGATTTTGGATGAGCTAGCGCCAATGGGTGTGATTCCTGAGACAGCTTTTGAAGATATGATCAATGTGCTGTGCAAAGCTGGCCGTTTCAATGAAGCCTGCAAGTTGGCCGATGGAATTGTGGACAGAGGTAGGGAAATACCAGGACGAATCCGAACGGTTCTAATCAATGCCTTGAGGAAAGCAGGCAATGCAGATTTAGCTATGAAGTTGATGCATAGTAAGATCGGTATTGGGTATGACCGAATGGGTAGCGTCAAAAGGCGAGTGAAGTTCCGAACTCTCTTTGACAACCCTTGA

Protein Analysis

655

Amino Acids

73.23

Weight (kDa)

8.37

Isoelectric Point (pI)

31.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 186 - 232 2.1e-07 PPR repeat family
PPR_3 PF13812 210 - 265 2.9e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 236 - 266 1.7e-06 PPR repeat family
PPR_1 PF12854 251 - 282 5e-11 PPR repeat
PPR_2 PF13041 253 - 300 1e-16 PPR repeat family
PPR PF01535 256 - 286 3.8e-08 PPR repeat
PPR_2 PF13041 290 - 337 5.6e-10 PPR repeat family
PPR PF01535 291 - 321 2.4e-06 PPR repeat
PPR_long PF17177 295 - 449 1.2e-14 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 327 - 368 2.1e-06 PPR repeat family
TPR_24 PF23276 346 - 455 8.3e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 347 - 403 2.5e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 354 - 387 9.6e-08 PPR repeat
PPR_2 PF13041 359 - 407 9.7e-17 PPR repeat family
PPR PF01535 363 - 391 3e-08 PPR repeat
PPR_1 PF12854 389 - 416 3.5e-10 PPR repeat
PPR_1 PF12854 424 - 457 1.5e-09 PPR repeat
PPR_2 PF13041 429 - 477 2.3e-12 PPR repeat family
PPR PF01535 433 - 461 1.4e-08 PPR repeat
PPR_long PF17177 445 - 585 1.9e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 451 - 508 6.5e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 459 - 492 2.7e-08 PPR repeat
PPR_2 PF13041 464 - 512 1.2e-15 PPR repeat family
PPR PF01535 467 - 496 1.3e-09 PPR repeat
PPR_1 PF12854 495 - 526 4.8e-07 PPR repeat
PPR_2 PF13041 503 - 546 6.6e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 669, 774
AasI GACNNNNNNGTC 1 cut(s) 69
AatII GACGTC 1 cut(s) 204
AccB7I CCANNNNNTGG 1 cut(s) 946
AccBSI CCGCTC 1 cut(s) 721
AciI CCGC 5 cut(s) 396, 403, 560, 721, 1524
AcoI YGGCCR 2 cut(s) 1747, 1773
AcsI RAATTY 6 cut(s) 109, 139, 229, 565, 694, 966
AcuI CTGAAG 1 cut(s) 1597
AcyI GRCGYC 2 cut(s) 201, 625
AfaI GTAC 5 cut(s) 77, 121, 516, 662, 1250
AfiI CCNNNNNNNGG 3 cut(s) 289, 402, 946
AjnI CCWGG 2 cut(s) 143, 1807
Alw21I GWGCWC 1 cut(s) 1542
Alw26I GTCTC 4 cut(s) 208, 342, 1643, 1700
AoxI GGCC 4 cut(s) 294, 1617, 1747, 1773
ApaI GGGCCC 1 cut(s) 1621
ApeKI GCWGC 1 cut(s) 41
ApoI RAATTY 6 cut(s) 109, 139, 229, 565, 694, 966
Asp700I GAANNNNTTC 1 cut(s) 1145
AspLEI GCGC 1 cut(s) 1687
AspS9I GGNCC 4 cut(s) 279, 499, 1617, 1618
AsuHPI GGTGA 2 cut(s) 148, 703
AsuNHI GCTAGC 1 cut(s) 1681
AvaII GGWCC 2 cut(s) 279, 499
BaeGI GKGCMC 1 cut(s) 1621
BanII GRGCYC 2 cut(s) 25, 1621
BbsI GAAGAC 1 cut(s) 84
Bbv12I GWGCWC 1 cut(s) 1542
BbvI GCAGC 1 cut(s) 53
BccI CCATC 7 cut(s) 247, 269, 283, 1270, 1307, 1360, 1772
BceAI ACGGC 2 cut(s) 1022, 1734
BciT130I CCWGG 2 cut(s) 145, 1809
BclI TGATCA 5 cut(s) 327, 993, 1098, 1489, 1725
BcoDI GTCTC 4 cut(s) 208, 342, 1643, 1700
BfaI CTAG 4 cut(s) 654, 1302, 1424, 1682
BfoI RGCGCY 1 cut(s) 1688
BglI GCCNNNNNGGC 1 cut(s) 1079
BisI GCNGC 2 cut(s) 42, 561
BlpI GCTNAGC 1 cut(s) 717
BlsI GCNGC 2 cut(s) 43, 562
BmcAI AGTACT 1 cut(s) 1250
Bme1390I CCNGG 2 cut(s) 145, 1809
Bme18I GGWCC 2 cut(s) 279, 499
BmgT120I GGNCC 4 cut(s) 279, 499, 1617, 1618
BmiI GGNNCC 4 cut(s) 280, 281, 861, 1619
BmrFI CCNGG 2 cut(s) 145, 1809
BmsI GCATC 3 cut(s) 1408, 1599, 1869
BmtI GCTAGC 1 cut(s) 1685
BpiI GAAGAC 1 cut(s) 84
Bpu1102I GCTNAGC 1 cut(s) 717
BpuEI CTTGAG 1 cut(s) 1861
Bsa29I ATCGAT 2 cut(s) 1311, 1416
BsaHI GRCGYC 2 cut(s) 201, 625
BsaJI CCNNGG 2 cut(s) 82, 245
BsaWI WCCGGW 1 cut(s) 757
Bsc4I CCNNNNNNNGG 3 cut(s) 289, 402, 946
Bse3DI GCAATG 4 cut(s) 828, 1143, 1248, 1861
BseBI CCWGG 2 cut(s) 145, 1809
BseCI ATCGAT 2 cut(s) 1311, 1416
BseDI CCNNGG 2 cut(s) 82, 245
BseGI GGATG 7 cut(s) 78, 593, 1070, 1161, 1281, 1385, 1681
BseLI CCNNNNNNNGG 3 cut(s) 289, 402, 946
BseMI GCAATG 4 cut(s) 828, 1143, 1248, 1861
BseMII CTCAG 4 cut(s) 8, 708, 1656, 1695
BseRI GAGGAG 2 cut(s) 162, 1250
BseSI GKGCMC 1 cut(s) 1621
BseXI GCAGC 1 cut(s) 53
BshFI GGCC 4 cut(s) 296, 1619, 1749, 1775
BshVI ATCGAT 2 cut(s) 1311, 1416
BsiHKAI GWGCWC 1 cut(s) 1542
BsiSI CCGG 1 cut(s) 758
BslFI GGGAC 2 cut(s) 265, 1583
BslI CCNNNNNNNGG 3 cut(s) 289, 402, 946
BsmAI GTCTC 4 cut(s) 208, 342, 1643, 1700
BsmBI CGTCTC 1 cut(s) 208
BsmFI GGGAC 2 cut(s) 265, 1583
BsnI GGCC 4 cut(s) 296, 1619, 1749, 1775
Bsp120I GGGCCC 1 cut(s) 1617
Bsp1286I GDGCHC 3 cut(s) 25, 1542, 1621
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
Bsp1720I GCTNAGC 1 cut(s) 717
Bsp19I CCATGG 1 cut(s) 82
BspACI CCGC 5 cut(s) 396, 403, 560, 721, 1524
BspANI GGCC 4 cut(s) 296, 1619, 1749, 1775
BspCNI CTCAG 4 cut(s) 9, 709, 1655, 1696
BspDI ATCGAT 2 cut(s) 1311, 1416
BspLI GGNNCC 4 cut(s) 280, 281, 861, 1619
BspOI GCTAGC 1 cut(s) 1685
BsrBI CCGCTC 1 cut(s) 721
BsrDI GCAATG 4 cut(s) 828, 1143, 1248, 1861
BsrGI TGTACA 1 cut(s) 660
BssECI CCNNGG 2 cut(s) 82, 245
BssMI GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
BssNI GRCGYC 2 cut(s) 201, 625
BssT1I CCWWGG 1 cut(s) 82
Bst2UI CCWGG 2 cut(s) 145, 1809
Bst4CI ACNGT 5 cut(s) 119, 314, 503, 1498, 1825
Bst6I CTCTTC 3 cut(s) 945, 1470, 1545
BstACI GRCGYC 2 cut(s) 201, 625
BstAPI GCANNNNNTGC 2 cut(s) 1286, 1856
BstAUI TGTACA 1 cut(s) 660
BstC8I GCNNGC 5 cut(s) 1663, 1683, 1747, 1765, 1852
BstDEI CTNAG 4 cut(s) 17, 717, 1642, 1704
BstDSI CCRYGG 2 cut(s) 82, 245
BstF5I GGATG 7 cut(s) 78, 593, 1070, 1161, 1281, 1385, 1681
BstH2I RGCGCY 1 cut(s) 1688
BstHHI GCGC 1 cut(s) 1687
BstKTI GATC 6 cut(s) 330, 996, 1101, 1492, 1728, 1893
BstMAI GTCTC 4 cut(s) 208, 342, 1643, 1700
BstMBI GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
BstMWI GCNNNNNNNGC 6 cut(s) 1079, 1286, 1448, 1746, 1856, 1865
BstNI CCWGG 2 cut(s) 145, 1809
BstSCI CCNGG 2 cut(s) 143, 1807
BstSLI GKGCMC 1 cut(s) 1621
BstV1I GCAGC 1 cut(s) 53
BstV2I GAAGAC 1 cut(s) 84
BstXI CCANNNNNNTGG 1 cut(s) 246
Bsu15I ATCGAT 2 cut(s) 1311, 1416
BsuRI GGCC 4 cut(s) 296, 1619, 1749, 1775
BsuTUI ATCGAT 2 cut(s) 1311, 1416
BtgI CCRYGG 2 cut(s) 82, 245
BtsCI GGATG 7 cut(s) 78, 593, 1070, 1161, 1281, 1385, 1681
BtsIMutI CAGTG 1 cut(s) 115
Cac8I GCNNGC 5 cut(s) 1663, 1683, 1747, 1765, 1852
CfoI GCGC 1 cut(s) 1687
Cfr13I GGNCC 4 cut(s) 279, 499, 1617, 1618
ClaI ATCGAT 2 cut(s) 1311, 1416
CseI GACGC 2 cut(s) 614, 1909
Csp6I GTAC 5 cut(s) 76, 120, 515, 661, 1249
CviAII CATG 3 cut(s) 83, 880, 977
CviQI GTAC 5 cut(s) 76, 120, 515, 661, 1249
DdeI CTNAG 4 cut(s) 17, 717, 1642, 1704
DpnI GATC 6 cut(s) 329, 995, 1100, 1491, 1727, 1892
DpnII GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
DrdI GACNNNNNNGTC 1 cut(s) 69
DseDI GACNNNNNNGTC 1 cut(s) 69
EaeI YGGCCR 2 cut(s) 1747, 1773
Eam1104I CTCTTC 3 cut(s) 945, 1470, 1545
EarI CTCTTC 3 cut(s) 945, 1470, 1545
Eco130I CCWWGG 1 cut(s) 82
Eco24I GRGCYC 2 cut(s) 25, 1621
Eco47I GGWCC 2 cut(s) 279, 499
Eco57I CTGAAG 1 cut(s) 1597
EcoO109I RGGNCCY 3 cut(s) 279, 1617, 1618
EcoRI GAATTC 1 cut(s) 694
EcoRII CCWGG 2 cut(s) 143, 1807
EcoT14I CCWWGG 1 cut(s) 82
EcoT22I ATGCAT 1 cut(s) 1884
EcoT38I GRGCYC 2 cut(s) 25, 1621
ErhI CCWWGG 1 cut(s) 82
Esp3I CGTCTC 1 cut(s) 208
FaeI CATG 3 cut(s) 86, 883, 980
FaqI GGGAC 2 cut(s) 265, 1583
FatI CATG 3 cut(s) 82, 879, 976
FauI CCCGC 1 cut(s) 714
FauNDI CATATG 2 cut(s) 1050, 1108
FbaI TGATCA 5 cut(s) 327, 993, 1098, 1489, 1725
Fnu4HI GCNGC 2 cut(s) 42, 561
FokI GGATG 7 cut(s) 65, 600, 1077, 1168, 1288, 1392, 1688
FriOI GRGCYC 2 cut(s) 25, 1621
Fsp4HI GCNGC 2 cut(s) 42, 561
FspBI CTAG 4 cut(s) 654, 1302, 1424, 1682
GlaI GCGC 1 cut(s) 1686
GluI GCNGC 2 cut(s) 42, 561
HaeII RGCGCY 1 cut(s) 1688
HaeIII GGCC 4 cut(s) 296, 1619, 1749, 1775
HapII CCGG 1 cut(s) 758
HgaI GACGC 2 cut(s) 614, 1909
HhaI GCGC 1 cut(s) 1687
Hin1I GRCGYC 2 cut(s) 201, 625
Hin1II CATG 3 cut(s) 86, 883, 980
Hin6I GCGC 1 cut(s) 1685
HinP1I GCGC 1 cut(s) 1685
HindIII AAGCTT 5 cut(s) 102, 446, 524, 580, 1142
HinfI GANTC 8 cut(s) 265, 305, 710, 920, 1054, 1391, 1699, 1815
HpaII CCGG 1 cut(s) 758
HphI GGTGA 2 cut(s) 148, 703
Hpy166II GTNNAC 4 cut(s) 515, 663, 1385, 1789
Hpy188I TCNGA 7 cut(s) 208, 836, 907, 1059, 1494, 1820, 1943
Hpy188III TCNNGA 6 cut(s) 176, 325, 491, 745, 1150, 1703
Hpy8I GTNNAC 4 cut(s) 515, 663, 1385, 1789
Hpy99I CGWCG 2 cut(s) 100, 630
HpyAV CCTTC 9 cut(s) 628, 902, 1022, 1054, 1126, 1259, 1369, 1475, 1621
HpyCH4III ACNGT 5 cut(s) 119, 314, 503, 1498, 1825
HpyCH4IV ACGT 2 cut(s) 122, 201
HpyCH4V TGCA 7 cut(s) 755, 1008, 1665, 1740, 1767, 1859, 1882
HpyF10VI GCNNNNNNNGC 6 cut(s) 1079, 1286, 1448, 1746, 1856, 1865
HpyF3I CTNAG 4 cut(s) 17, 717, 1642, 1704
HpySE526I ACGT 2 cut(s) 122, 201
Hsp92I GRCGYC 2 cut(s) 201, 625
Hsp92II CATG 3 cut(s) 86, 883, 980
HspAI GCGC 1 cut(s) 1685
KflI GGGWCCC 1 cut(s) 279
Ksp22I TGATCA 5 cut(s) 327, 993, 1098, 1489, 1725
Kzo9I GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
LmnI GCTCC 2 cut(s) 1122, 1537
Lsp1109I GCAGC 1 cut(s) 53
LweI GCATC 3 cut(s) 1408, 1599, 1869
MaeI CTAG 4 cut(s) 654, 1302, 1424, 1682
MaeII ACGT 2 cut(s) 122, 201
MaeIII GTNAC 2 cut(s) 766, 1186
MalI GATC 6 cut(s) 329, 995, 1100, 1491, 1727, 1892
MbiI CCGCTC 1 cut(s) 721
MboI GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
MboII GAAGA 9 cut(s) 18, 44, 84, 442, 546, 962, 1487, 1562, 1730
MhlI GDGCHC 3 cut(s) 25, 1542, 1621
MlyI GAGTC 1 cut(s) 299
Mph1103I ATGCAT 1 cut(s) 1884
MroXI GAANNNNTTC 1 cut(s) 1145
MseI TTAA 8 cut(s) 522, 528, 576, 786, 887, 1284, 1464, 1533
MslI CAYNNNNRTG 2 cut(s) 244, 1545
MspA1I CMGCKG 1 cut(s) 1524
MspI CCGG 1 cut(s) 758
MspR9I CCNGG 2 cut(s) 145, 1809
MvaI CCWGG 2 cut(s) 145, 1809
MwoI GCNNNNNNNGC 6 cut(s) 1079, 1286, 1448, 1746, 1856, 1865
NcoI CCATGG 1 cut(s) 82
NdeI CATATG 2 cut(s) 1050, 1108
NdeII GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
NheI GCTAGC 1 cut(s) 1681
NlaIII CATG 3 cut(s) 86, 883, 980
NlaIV GGNNCC 4 cut(s) 280, 281, 861, 1619
NmuCI GTSAC 2 cut(s) 766, 1186
NsiI ATGCAT 1 cut(s) 1884
PcsI WCGNNNNNNNCGW 1 cut(s) 1200
PdmI GAANNNNTTC 1 cut(s) 1145
PfeI GAWTC 7 cut(s) 265, 710, 920, 1054, 1391, 1699, 1815
PflMI CCANNNNNTGG 1 cut(s) 946
PkrI GCNGC 2 cut(s) 43, 562
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
PpuMI RGGWCCY 1 cut(s) 279
PsiI TTATAA 2 cut(s) 669, 774
Psp5II RGGWCCY 1 cut(s) 279
Psp6I CCWGG 2 cut(s) 143, 1807
PspGI CCWGG 2 cut(s) 143, 1807
PspN4I GGNNCC 4 cut(s) 280, 281, 861, 1619
PspOMI GGGCCC 1 cut(s) 1617
PspPI GGNCC 4 cut(s) 279, 499, 1617, 1618
PspPPI RGGWCCY 1 cut(s) 279
RsaI GTAC 5 cut(s) 77, 121, 516, 662, 1250
RsaNI GTAC 5 cut(s) 76, 120, 515, 661, 1249
RseI CAYNNNNRTG 2 cut(s) 244, 1545
SaqAI TTAA 8 cut(s) 522, 528, 576, 786, 887, 1284, 1464, 1533
SatI GCNGC 2 cut(s) 42, 561
Sau3AI GATC 6 cut(s) 327, 993, 1098, 1489, 1725, 1890
Sau96I GGNCC 4 cut(s) 279, 499, 1617, 1618
ScaI AGTACT 1 cut(s) 1250
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 2 cut(s) 145, 1809
SduI GDGCHC 3 cut(s) 25, 1542, 1621
SfaNI GCATC 3 cut(s) 1408, 1599, 1869
SinI GGWCC 2 cut(s) 279, 499
SmiMI CAYNNNNRTG 2 cut(s) 244, 1545
SmlI CTYRAG 1 cut(s) 1840
SmoI CTYRAG 1 cut(s) 1840
SsiI CCGC 5 cut(s) 396, 403, 560, 721, 1524
SspMI CTAG 4 cut(s) 654, 1302, 1424, 1682
StyD4I CCNGG 2 cut(s) 143, 1807
StyI CCWWGG 1 cut(s) 82
TaaI ACNGT 5 cut(s) 119, 314, 503, 1498, 1825
TaiI ACGT 2 cut(s) 125, 204
TaqI TCGA 8 cut(s) 98, 218, 508, 628, 698, 1149, 1311, 1416
TaqII GACCGA 1 cut(s) 1923
TatI WGTACW 3 cut(s) 514, 660, 1248
TauI GCSGC 1 cut(s) 563
TfiI GAWTC 7 cut(s) 265, 710, 920, 1054, 1391, 1699, 1815
Tru1I TTAA 8 cut(s) 522, 528, 576, 786, 887, 1284, 1464, 1533
Tru9I TTAA 8 cut(s) 522, 528, 576, 786, 887, 1284, 1464, 1533
TscAI CASTG 1 cut(s) 122
TseFI GTSAC 2 cut(s) 766, 1186
TseI GCWGC 1 cut(s) 41
Tsp45I GTSAC 2 cut(s) 766, 1186
TspGWI ACGGA 2 cut(s) 63, 234
TspRI CASTG 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 946
VpaK11BI GGWCC 2 cut(s) 279, 499
XapI RAATTY 6 cut(s) 109, 139, 229, 565, 694, 966
XmnI GAANNNNTTC 1 cut(s) 1145
XspI CTAG 4 cut(s) 654, 1302, 1424, 1682
ZraI GACGTC 1 cut(s) 202
ZrmI AGTACT 1 cut(s) 1250
Zsp2I ATGCAT 1 cut(s) 1884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.