pycom17g07920

Pentatricopeptide repeat-containing protein At1g03560

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0003325
Physical Location & Seq
Forward (+)
5929134 .. 5931095
1962 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g07920.1

Sequence Viewer

Length: 1962 bp
ATGAGAAGAAACCTACTGAGAGCCCCCCTATCACTCTCATCAGCCCGTATTCTTCCTCCAAGACCTCCCCGTCCGTACATCCATGGAGGGTCTTCGTCGAAAGCTTCAAATTCTCACTGTACGTCAAGTTTCGGCTCAAATTCCAGGTGGGTTTTCACCGACTCTCTCCCTCCTCCCGAATGGGTAGAACCTTTCAATGACGTCTCTGATGTAGTATCGAACACACAAAATTTTGACCCATCTCCGTGGGTCGCTCAAATTGTGAATCTTTTAGATGGGTCTCCTACAATGGAGGCCAATTTAGACTCTTACTGTCGCACATTCTTGATCAAATTGTCTCCTAATTTTGTTTCGTATGTGTTAAAATCTTCTGAGCTTCGTGGGAAGCCCAAAACCGCCTTGCGGTTCTTTGCTTGGGCTGGTAGCCAGAAGAAGTATCATCATAAGCTTGACTGCTATGTATCTTTGATTGAACTTTTATCTGTGTGTCGTGATTTGGACCGTATTCGATGTGTACTTGTTAAGCTTAAAGAAATGAACTTTTTGATGACTTCATCGGCGGCAAATTCTTTGATTAAAAGCTTTGGATGTCTTGGAATGGTTGATGAGCTGTTGTGGGTTTGGCGTCGAATGAAGGAGAATGGGATTGAGCCTAGTTTGTACACTTATAACTTTTTACTGAATGGTTTGGTGAATTCGATGTTTATTGAATCCGCTGAGCGGGTTTATGAGGTTATGGAAGGCGGGAAAATTGCACCGGACATTGTGACTTATAATACAATGATTAAAGGGTATTGTAAGGGAGGGAAAACCCAGAAAGCAATGGAGAAGTTCAGAGCTATGGAGGGGAGGAATGTGGAACCTGATAAGATTACTTACATGACTTTAATACAGGGGTGTTATTCAGAAGGACATGTTGATTCGTGTTTGGGTCTTTACCAAGAAATGGAAGAGAAAGGACTTGAAATTCCACCTCATGCGTATAGTTTAGTGATCAACGGGCTTTGCAAAGGTGGGAAATGTATGGAAGGATATGCTGTATTTGAAGATATGATTCGGAAGGGATGTAAAGCCAATGTGGCAAACTATACAGCATTGATCGATTCATATGTGAAATGTGGGAGCATTGAGGAGGCAATGAAGCTTTTCGAGAGGATGAAAAATGACGGGCTTGAACCAGATGAGGTCACTTACGGGGTTATCGTCAATGGATTATGTAAGAGTGGGAGAGTGGAGGAGGCAATGGAGTACTTTGCTTTTTGTGAAGGCAGGGGGATGGCAGTTAACGCTATGTTTTATTCTAGTCTAATCGATGGTCTTGGAAAAGCGGGAAGGCTTGATGAGGCTGAAAGGCTCTTTGAAATGATGGTAGTGAAGGGATGTCCACAGGATTCATACTGCTATAATGCCCTTATCGATGCCCTGGCTAAATGTGGAAAAGCTGATGAAGCATTAGCAATCTTTAAGAAAATGGAAGAGGAAGGTTGTGATCAGACGGTTTATACATACACAATACTCATCAGCGGACTTTTTAAGGAGCACAGAAATGAAGAGGCATTGAAGCTCTGGGACATGATGATCGATAAGGGCATCACACCGAATGTTGCTTCCTTCAGGGCCCTCTCTATTGGGCTCTGTCTCTCAGGCAAGGTAGCCCGAGCCTGCAAGATTTTGGATGAGCTAGCGCCAATGGGTGTGATTCCTGAGACAGCTTTTGAAGATATGATCAATGTGCTGTGCAAAGCTTGCCGTTACAAGGAAGCCTGCAAATTGGCCGACGGAATTGTGGACAGAGGTAGGGAAATACCAGGACGAATCCGAACGGTTCTAATCAATGCCTTGAGGAAAGCAGGCAATGCAGATTTAGCTATGAAGTTGATGCATAGTAAGATCGGTATTGGGTATGACCGAAAGGGTAGCGTCAAAAGGCGAGTGAAGTTCCGAACTCTCTTTGACAGTTAA

Protein Analysis

654

Amino Acids

73.07

Weight (kDa)

8.27

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 186 - 232 2e-08 PPR repeat family
PPR_3 PF13812 209 - 265 1.3e-09 Pentatricopeptide repeat domain
PPR_2 PF13041 236 - 267 5.6e-07 PPR repeat family
PPR_3 PF13812 246 - 299 1.2e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 251 - 282 5e-11 PPR repeat
PPR_2 PF13041 253 - 300 9.9e-17 PPR repeat family
PPR PF01535 256 - 286 3.7e-08 PPR repeat
PPR_2 PF13041 291 - 337 8.7e-10 PPR repeat family
PPR PF01535 291 - 321 6.4e-06 PPR repeat
PPR_long PF17177 295 - 445 2.6e-12 Pentacotripeptide-repeat region of PRORP
PPR PF01535 327 - 356 9.4e-06 PPR repeat
PPR_3 PF13812 347 - 403 2.2e-11 Pentatricopeptide repeat domain
TPR_24 PF23276 351 - 454 1.5e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 354 - 387 5.6e-08 PPR repeat
PPR_2 PF13041 359 - 407 1.2e-16 PPR repeat family
PPR PF01535 363 - 391 1.8e-08 PPR repeat
PPR_1 PF12854 389 - 416 3.5e-10 PPR repeat
PPR_1 PF12854 424 - 457 8e-09 PPR repeat
PPR_2 PF13041 429 - 477 8.9e-12 PPR repeat family
PPR PF01535 433 - 461 3.4e-08 PPR repeat
PPR_3 PF13812 451 - 508 6.5e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 459 - 492 1.3e-07 PPR repeat
PPR_2 PF13041 464 - 512 4e-15 PPR repeat family
PPR PF01535 467 - 496 2.7e-09 PPR repeat
PPR_1 PF12854 495 - 526 5.2e-07 PPR repeat
PPR_2 PF13041 500 - 546 1.4e-11 PPR repeat family
PPR PF01535 501 - 531 3e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 669, 774
AasI GACNNNNNNGTC 1 cut(s) 69
AatII GACGTC 1 cut(s) 204
AccB7I CCANNNNNTGG 1 cut(s) 946
AccBSI CCGCTC 1 cut(s) 721
AciI CCGC 8 cut(s) 396, 403, 560, 714, 721, 744, 1328, 1524
AcoI YGGCCR 1 cut(s) 1773
AcsI RAATTY 6 cut(s) 109, 139, 229, 565, 694, 966
AcuI CTGAAG 1 cut(s) 1597
AcyI GRCGYC 2 cut(s) 201, 625
AfaI GTAC 5 cut(s) 77, 121, 516, 662, 1250
AfiI CCNNNNNNNGG 4 cut(s) 402, 720, 946, 1756
AflIII ACRYGT 1 cut(s) 913
AjnI CCWGG 3 cut(s) 143, 1422, 1807
Alw21I GWGCWC 1 cut(s) 1542
Alw26I GTCTC 5 cut(s) 208, 285, 342, 1643, 1700
Ama87I CYCGRG 1 cut(s) 1656
AoxI GGCC 3 cut(s) 294, 1617, 1773
ApaI GGGCCC 1 cut(s) 1621
ApoI RAATTY 6 cut(s) 109, 139, 229, 565, 694, 966
Asp700I GAANNNNTTC 1 cut(s) 1145
AspLEI GCGC 1 cut(s) 1687
AspS9I GGNCC 3 cut(s) 499, 1617, 1618
AsuHPI GGTGA 2 cut(s) 148, 703
AsuNHI GCTAGC 1 cut(s) 1681
AvaI CYCGRG 1 cut(s) 1656
AvaII GGWCC 1 cut(s) 499
BaeGI GKGCMC 1 cut(s) 1621
BanII GRGCYC 3 cut(s) 25, 1621, 1635
BbsI GAAGAC 1 cut(s) 84
Bbv12I GWGCWC 1 cut(s) 1542
BccI CCATC 5 cut(s) 247, 269, 1270, 1307, 1360
BceAI ACGGC 1 cut(s) 1734
BciT130I CCWGG 3 cut(s) 145, 1424, 1809
BclI TGATCA 4 cut(s) 327, 993, 1489, 1725
BcoDI GTCTC 5 cut(s) 208, 285, 342, 1643, 1700
BfaI CTAG 3 cut(s) 654, 1302, 1682
BfoI RGCGCY 1 cut(s) 1688
BglI GCCNNNNNGGC 1 cut(s) 1079
BisI GCNGC 1 cut(s) 561
BlpI GCTNAGC 1 cut(s) 717
BlsI GCNGC 1 cut(s) 562
BmcAI AGTACT 1 cut(s) 1250
Bme1390I CCNGG 3 cut(s) 145, 1424, 1809
Bme18I GGWCC 1 cut(s) 499
BmeT110I CYCGRG 1 cut(s) 1656
BmgT120I GGNCC 3 cut(s) 499, 1617, 1618
BmiI GGNNCC 2 cut(s) 861, 1619
BmrFI CCNGG 3 cut(s) 145, 1424, 1809
BmsI GCATC 3 cut(s) 1408, 1599, 1869
BmtI GCTAGC 1 cut(s) 1685
BpiI GAAGAC 1 cut(s) 84
Bpu1102I GCTNAGC 1 cut(s) 717
BpuEI CTTGAG 1 cut(s) 1861
Bsa29I ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BsaHI GRCGYC 2 cut(s) 201, 625
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 82, 245, 1422
BsaWI WCCGGW 1 cut(s) 757
Bsc4I CCNNNNNNNGG 4 cut(s) 402, 720, 946, 1756
Bse3DI GCAATG 4 cut(s) 828, 1143, 1248, 1861
BseBI CCWGG 3 cut(s) 145, 1424, 1809
BseCI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BseDI CCNNGG 3 cut(s) 82, 245, 1422
BseGI GGATG 7 cut(s) 78, 593, 1070, 1161, 1281, 1385, 1681
BseLI CCNNNNNNNGG 4 cut(s) 402, 720, 946, 1756
BseMI GCAATG 4 cut(s) 828, 1143, 1248, 1861
BseMII CTCAG 5 cut(s) 8, 363, 708, 1656, 1695
BseRI GAGGAG 3 cut(s) 162, 1145, 1250
BseSI GKGCMC 1 cut(s) 1621
BshFI GGCC 3 cut(s) 296, 1619, 1775
BshVI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BsiHKAI GWGCWC 1 cut(s) 1542
BsiHKCI CYCGRG 1 cut(s) 1656
BsiSI CCGG 1 cut(s) 758
BslFI GGGAC 1 cut(s) 1583
BslI CCNNNNNNNGG 4 cut(s) 402, 720, 946, 1756
BsmAI GTCTC 5 cut(s) 208, 285, 342, 1643, 1700
BsmBI CGTCTC 1 cut(s) 208
BsmFI GGGAC 1 cut(s) 1583
BsnI GGCC 3 cut(s) 296, 1619, 1775
Bso31I GGTCTC 1 cut(s) 285
BsoBI CYCGRG 1 cut(s) 1656
Bsp120I GGGCCC 1 cut(s) 1617
Bsp1286I GDGCHC 4 cut(s) 25, 1542, 1621, 1635
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
Bsp1720I GCTNAGC 1 cut(s) 717
Bsp19I CCATGG 1 cut(s) 82
BspACI CCGC 8 cut(s) 396, 403, 560, 714, 721, 744, 1328, 1524
BspANI GGCC 3 cut(s) 296, 1619, 1775
BspCNI CTCAG 5 cut(s) 9, 364, 709, 1655, 1696
BspDI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BspLI GGNNCC 2 cut(s) 861, 1619
BspOI GCTAGC 1 cut(s) 1685
BspTNI GGTCTC 1 cut(s) 285
BsrBI CCGCTC 1 cut(s) 721
BsrDI GCAATG 4 cut(s) 828, 1143, 1248, 1861
BsrGI TGTACA 1 cut(s) 660
BssECI CCNNGG 3 cut(s) 82, 245, 1422
BssMI GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
BssNI GRCGYC 2 cut(s) 201, 625
BssT1I CCWWGG 1 cut(s) 82
Bst2UI CCWGG 3 cut(s) 145, 1424, 1809
Bst4CI ACNGT 6 cut(s) 119, 314, 503, 1498, 1825, 1958
Bst6I CTCTTC 3 cut(s) 945, 1470, 1545
BstACI GRCGYC 2 cut(s) 201, 625
BstAPI GCANNNNNTGC 2 cut(s) 1746, 1856
BstAUI TGTACA 1 cut(s) 660
BstC8I GCNNGC 5 cut(s) 1663, 1683, 1747, 1765, 1852
BstDEI CTNAG 5 cut(s) 17, 372, 717, 1642, 1704
BstDSI CCRYGG 2 cut(s) 82, 245
BstF5I GGATG 7 cut(s) 78, 593, 1070, 1161, 1281, 1385, 1681
BstH2I RGCGCY 1 cut(s) 1688
BstHHI GCGC 1 cut(s) 1687
BstKTI GATC 7 cut(s) 330, 996, 1101, 1492, 1581, 1728, 1893
BstMAI GTCTC 5 cut(s) 208, 285, 342, 1643, 1700
BstMBI GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
BstMWI GCNNNNNNNGC 6 cut(s) 1079, 1286, 1448, 1746, 1856, 1865
BstNI CCWGG 3 cut(s) 145, 1424, 1809
BstNSI RCATGY 1 cut(s) 917
BstSCI CCNGG 3 cut(s) 143, 1422, 1807
BstSLI GKGCMC 1 cut(s) 1621
BstV2I GAAGAC 1 cut(s) 84
BstXI CCANNNNNNTGG 1 cut(s) 246
Bsu15I ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BsuRI GGCC 3 cut(s) 296, 1619, 1775
BsuTUI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BtgI CCRYGG 2 cut(s) 82, 245
BtsCI GGATG 7 cut(s) 78, 593, 1070, 1161, 1281, 1385, 1681
BtsIMutI CAGTG 1 cut(s) 115
Cac8I GCNNGC 5 cut(s) 1663, 1683, 1747, 1765, 1852
CfoI GCGC 1 cut(s) 1687
Cfr13I GGNCC 3 cut(s) 499, 1617, 1618
ClaI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
CseI GACGC 2 cut(s) 614, 1909
Csp6I GTAC 5 cut(s) 76, 120, 515, 661, 1249
CviAII CATG 5 cut(s) 83, 880, 914, 977, 1573
CviQI GTAC 5 cut(s) 76, 120, 515, 661, 1249
DdeI CTNAG 5 cut(s) 17, 372, 717, 1642, 1704
DpnI GATC 7 cut(s) 329, 995, 1100, 1491, 1580, 1727, 1892
DpnII GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
DrdI GACNNNNNNGTC 1 cut(s) 69
DseDI GACNNNNNNGTC 1 cut(s) 69
EaeI YGGCCR 1 cut(s) 1773
Eam1104I CTCTTC 3 cut(s) 945, 1470, 1545
EarI CTCTTC 3 cut(s) 945, 1470, 1545
Eco130I CCWWGG 1 cut(s) 82
Eco24I GRGCYC 3 cut(s) 25, 1621, 1635
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 499
Eco57I CTGAAG 1 cut(s) 1597
Eco88I CYCGRG 1 cut(s) 1656
EcoO109I RGGNCCY 2 cut(s) 1617, 1618
EcoRI GAATTC 1 cut(s) 694
EcoRII CCWGG 3 cut(s) 143, 1422, 1807
EcoT14I CCWWGG 1 cut(s) 82
EcoT22I ATGCAT 1 cut(s) 1884
EcoT38I GRGCYC 3 cut(s) 25, 1621, 1635
ErhI CCWWGG 1 cut(s) 82
Esp3I CGTCTC 1 cut(s) 208
FaeI CATG 5 cut(s) 86, 883, 917, 980, 1576
FaqI GGGAC 1 cut(s) 1583
FatI CATG 5 cut(s) 82, 879, 913, 976, 1572
FauI CCCGC 3 cut(s) 714, 737, 1321
FauNDI CATATG 1 cut(s) 1108
FbaI TGATCA 4 cut(s) 327, 993, 1489, 1725
Fnu4HI GCNGC 1 cut(s) 561
FokI GGATG 7 cut(s) 65, 600, 1077, 1168, 1288, 1392, 1688
FriOI GRGCYC 3 cut(s) 25, 1621, 1635
Fsp4HI GCNGC 1 cut(s) 561
FspBI CTAG 3 cut(s) 654, 1302, 1682
GlaI GCGC 1 cut(s) 1686
GluI GCNGC 1 cut(s) 561
HaeII RGCGCY 1 cut(s) 1688
HaeIII GGCC 3 cut(s) 296, 1619, 1775
HapII CCGG 1 cut(s) 758
HgaI GACGC 2 cut(s) 614, 1909
HhaI GCGC 1 cut(s) 1687
Hin1I GRCGYC 2 cut(s) 201, 625
Hin1II CATG 5 cut(s) 86, 883, 917, 980, 1576
Hin6I GCGC 1 cut(s) 1685
HinP1I GCGC 1 cut(s) 1685
HincII GTYRAC 1 cut(s) 1285
HindII GTYRAC 1 cut(s) 1285
HindIII AAGCTT 6 cut(s) 102, 446, 524, 580, 1142, 1743
HpaI GTTAAC 1 cut(s) 1285
HpaII CCGG 1 cut(s) 758
HphI GGTGA 2 cut(s) 148, 703
Hpy166II GTNNAC 5 cut(s) 515, 663, 1285, 1385, 1789
Hpy188I TCNGA 8 cut(s) 208, 373, 836, 907, 1059, 1494, 1820, 1943
Hpy188III TCNNGA 5 cut(s) 176, 325, 491, 1150, 1703
Hpy8I GTNNAC 5 cut(s) 515, 663, 1285, 1385, 1789
Hpy99I CGWCG 3 cut(s) 100, 630, 1781
HpyCH4III ACNGT 6 cut(s) 119, 314, 503, 1498, 1825, 1958
HpyCH4IV ACGT 2 cut(s) 122, 201
HpyCH4V TGCA 7 cut(s) 755, 1008, 1665, 1740, 1767, 1859, 1882
HpyF10VI GCNNNNNNNGC 6 cut(s) 1079, 1286, 1448, 1746, 1856, 1865
HpyF3I CTNAG 5 cut(s) 17, 372, 717, 1642, 1704
HpySE526I ACGT 2 cut(s) 122, 201
Hsp92I GRCGYC 2 cut(s) 201, 625
Hsp92II CATG 5 cut(s) 86, 883, 917, 980, 1576
HspAI GCGC 1 cut(s) 1685
Ksp22I TGATCA 4 cut(s) 327, 993, 1489, 1725
KspAI GTTAAC 1 cut(s) 1285
Kzo9I GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
LmnI GCTCC 2 cut(s) 1122, 1537
LweI GCATC 3 cut(s) 1408, 1599, 1869
MaeI CTAG 3 cut(s) 654, 1302, 1682
MaeII ACGT 2 cut(s) 122, 201
MaeIII GTNAC 3 cut(s) 766, 1186, 1751
MalI GATC 7 cut(s) 329, 995, 1100, 1491, 1580, 1727, 1892
MbiI CCGCTC 1 cut(s) 721
MboI GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
MhlI GDGCHC 4 cut(s) 25, 1542, 1621, 1635
MlyI GAGTC 2 cut(s) 155, 299
Mph1103I ATGCAT 1 cut(s) 1884
MroXI GAANNNNTTC 1 cut(s) 1145
MslI CAYNNNNRTG 2 cut(s) 244, 1545
MspA1I CMGCKG 2 cut(s) 716, 1524
MspI CCGG 1 cut(s) 758
MspR9I CCNGG 3 cut(s) 145, 1424, 1809
MvaI CCWGG 3 cut(s) 145, 1424, 1809
MwoI GCNNNNNNNGC 6 cut(s) 1079, 1286, 1448, 1746, 1856, 1865
NcoI CCATGG 1 cut(s) 82
NdeI CATATG 1 cut(s) 1108
NdeII GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
NheI GCTAGC 1 cut(s) 1681
NlaIII CATG 5 cut(s) 86, 883, 917, 980, 1576
NlaIV GGNNCC 2 cut(s) 861, 1619
NmuCI GTSAC 2 cut(s) 766, 1186
NsiI ATGCAT 1 cut(s) 1884
NspI RCATGY 1 cut(s) 917
PciI ACATGT 1 cut(s) 913
PcsI WCGNNNNNNNCGW 1 cut(s) 1200
PdmI GAANNNNTTC 1 cut(s) 1145
PfeI GAWTC 8 cut(s) 265, 710, 920, 1054, 1103, 1391, 1699, 1815
PflMI CCANNNNNTGG 1 cut(s) 946
PkrI GCNGC 1 cut(s) 562
PleI GAGTC 2 cut(s) 155, 299
PpsI GAGTC 2 cut(s) 155, 299
PscI ACATGT 1 cut(s) 913
PsiI TTATAA 2 cut(s) 669, 774
Psp6I CCWGG 3 cut(s) 143, 1422, 1807
PspGI CCWGG 3 cut(s) 143, 1422, 1807
PspN4I GGNNCC 2 cut(s) 861, 1619
PspOMI GGGCCC 1 cut(s) 1617
PspPI GGNCC 3 cut(s) 499, 1617, 1618
RsaI GTAC 5 cut(s) 77, 121, 516, 662, 1250
RsaNI GTAC 5 cut(s) 76, 120, 515, 661, 1249
RseI CAYNNNNRTG 2 cut(s) 244, 1545
SatI GCNGC 1 cut(s) 561
Sau3AI GATC 7 cut(s) 327, 993, 1098, 1489, 1578, 1725, 1890
Sau96I GGNCC 3 cut(s) 499, 1617, 1618
ScaI AGTACT 1 cut(s) 1250
SchI GAGTC 2 cut(s) 155, 299
ScrFI CCNGG 3 cut(s) 145, 1424, 1809
SduI GDGCHC 4 cut(s) 25, 1542, 1621, 1635
SfaNI GCATC 3 cut(s) 1408, 1599, 1869
SinI GGWCC 1 cut(s) 499
SmiMI CAYNNNNRTG 2 cut(s) 244, 1545
SmlI CTYRAG 1 cut(s) 1840
SmoI CTYRAG 1 cut(s) 1840
SsiI CCGC 8 cut(s) 396, 403, 560, 714, 721, 744, 1328, 1524
SspMI CTAG 3 cut(s) 654, 1302, 1682
StyD4I CCNGG 3 cut(s) 143, 1422, 1807
StyI CCWWGG 1 cut(s) 82
TaaI ACNGT 6 cut(s) 119, 314, 503, 1498, 1825, 1958
TaiI ACGT 2 cut(s) 125, 204
TaqII GACCGA 1 cut(s) 1923
TatI WGTACW 3 cut(s) 514, 660, 1248
TauI GCSGC 1 cut(s) 563
TfiI GAWTC 8 cut(s) 265, 710, 920, 1054, 1103, 1391, 1699, 1815
TscAI CASTG 1 cut(s) 122
TseFI GTSAC 2 cut(s) 766, 1186
Tsp45I GTSAC 2 cut(s) 766, 1186
TspGWI ACGGA 3 cut(s) 63, 234, 1794
TspRI CASTG 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 946
VpaK11BI GGWCC 1 cut(s) 499
XapI RAATTY 6 cut(s) 109, 139, 229, 565, 694, 966
XceI RCATGY 1 cut(s) 917
XmnI GAANNNNTTC 1 cut(s) 1145
XspI CTAG 3 cut(s) 654, 1302, 1682
ZraI GACGTC 1 cut(s) 202
ZrmI AGTACT 1 cut(s) 1250
Zsp2I ATGCAT 1 cut(s) 1884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.