Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0003325

Physical Location & Seq

Genomic Coordinates Reverse (-)

73766356 .. 73768034

Gene Structure 1679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G046560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGAACCCAACTTAGACTCTTACTGCAACAAATTCCTGATCAAGCTGTCTCCCAATTTCGTTGCATATGTGTTGAAATCTGATGATCTCCGAGGAAAGCCCGAGACAGCTCTCCGGTTTTTCTCCTGGGCCGGTAAGCAAGCAAAAGAACTTCTGTGTTTGTGTGGTGATTTGGGTAGGATTACATGTGTTGTTGTTGAGCTTAGAAAGATGAACTTTTTGATGAATTCGAATGCGGCGAATTGTTTGATTAAGAGTTTTGGCTGTCTTGGAATGGTTGAGGAGTTGTTGTGGGTTTGGTGTGGGATGAAGGAGAATGGGATTGAGCCTAGTTTGTATACTTACAACTTTTTGGTGAATGGATTGGTGAACTCGATGTTTATTGAATCCGCGGAGCGGGTTTTCGAGGTTATGGAAGGTGGGAAGATTGTGCCTGACATTGTGACTTATAATACAATGATTAAAGGGTATTATTGTAAGGCGGGGAAAACCCAGAAGGCAATGGAGAAGTTTATGGATATGGAGGGGAGGAATGTGGAGGCTGATAAGATTACTTATATGAATTTGATGCAGGGTCTGTACCAGGAAATGAGAGAGAAGGGGATTGAAATTCCGTCTCACGCGTATAGTTTAGTCATGAATGGGCTATGTAAAGGTGGGAAATGTATGGTTGGGTATGCTGTTTTTGAAGATATGATTGAGAAGGGTTGTAAAGCAAATGTGGCAAACTATACAGCTTTGATCGATTCATATGCAAAATGTGGGTGCATTGAAGAGGCAATGAAGCTTTTCGAGAGGATGAAGAGCGATGGGCTTGAACCAGATGGGGTTACTTATGGGGTTATTGTCAATGGATTATGTAAGAGTGGGAGATTGGATAAGGCCATGGAGTATTTTCAGTTTTGTCAAAACAGCAGAATGGCAGACAATGCTATGTTGTATTCTAGTTTAATCGATGGTCTTGGAAAGCCTGGAAGGGTTGATGAAGCTGAAAGGGTATTCGAAAAGATGATCGTAAATGGTTCAAAATGTGGAAAAACTGATGAAGCTTTAGCACTCTTTAAGAAAATGGAAAAAGAAGGTTGTGATCAGACCGTTTATACATACACAATACTCATTGATGGACTATTTAAGGAGCATAGGAATGAAGAGGCATTGAAGCTGTGGGACATGATGATCGATAAAGGCATCACACCAACTGCTGCTTCATTCAGAGCTCTCTCAATTGGGCTTTGTCTCTCAGGCAAAGTAGCCAGGGCCTGCAAGATTTTGGATGACCTAGCACCAATGGGGGTAATTCCTGAGACAGCTTTTGAAGATATGATCAATGTGTTGTGCAAAGCTGGTCGTGTCAAGGAAGCTTGCAAATTGGTTGATGGCATTAATCGAACTGTTCTAATCAATGCCTTGAGGAAAACAGGCAATGCAGATTTAGCTATGAAGTTGATGCATGGTAAGATTGGTATTGGGTATGACCGATGGGGTAGTGTCAAAAAGCGAGTGAAGTTCCGTATTCTCATTGACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

509

Amino Acids

56.93

Weight (kDa)

8.09

Isoelectric Point (pI)

24.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	77 - 124	6.8e-08	PPR repeat family
PPR_3	PF13812	103 - 157	1.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	143 - 175	1.7e-08	PPR repeat
PPR_2	PF13041	145 - 194	1.8e-12	PPR repeat family
PPR_long	PF17177	193 - 318	9.9e-10	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	225 - 335	1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	228 - 284	2.5e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	235 - 268	3.9e-08	PPR repeat
PPR_2	PF13041	240 - 288	1.1e-15	PPR repeat family
PPR	PF01535	244 - 272	2.3e-09	PPR repeat
PPR_1	PF12854	270 - 299	1.4e-09	PPR repeat
PPR_1	PF12854	310 - 337	1.8e-07	PPR repeat
TPR_24	PF23276	342 - 457	2.4e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	343 - 378	2.2e-10	PPR repeat family
PPR_1	PF12854	361 - 392	2.5e-07	PPR repeat
PPR	PF01535	367 - 397	2.4e-06	PPR repeat
PPR_2	PF13041	371 - 412	1.5e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03560
fragaria_vesca	FvH4_6g45000
malus_domestica	MD09G1090900.v1.1 MD17G1080900.v1.1
prunus_persica	Prupe.3G234000_v2.0.a1 Prupe.3G234000_v2.0.a1
pyrus_communis	pycom03g08050 pycom09g01610 pycom17g07920
rosa_chinensis	RchiOBHm_Chr2g0162271 RchiOBHm_Chr2g0162281 RchiOBHm_Chr2g0162291 RchiOBHm_Chr4g0446301 RchiOBHm_Chr5g0064621
rosa_laevigata	RLG00000021332
rosa_multiflora	Rmu_sc0002266.1_g000005 Rmu_sc0007544.1_g000003 Rmu_sc0007544.1_g000004
rosa_roxburghii	Rroxscaffold_2G00088200 Rroxscaffold_5G00386740
rosa_rugosa	Rorug02G0496100 Rorug04G0369800 Rorug04G0369900
rosa_samantha	Rh2AG562100 Rh2BG575200 Rh2BG575300 Rh2CG545500 Rh2CG545600 Rh2DG585100 Rh4AG431700 Rh4BG441000 Rh4CG458300 Rh4DG439600 Rh5BG154600
rosa_wichuraiana	Rw2G046560 Rw4G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	450
AccBSI	CCGCTC	1 cut(s)	397
AccI	GTMKAC	1 cut(s)	338
AccII	CGCG	2 cut(s)	392, 623
AciI	CCGC	5 cut(s)	236, 390, 392, 397, 482
AcsI	RAATTY	4 cut(s)	32, 226, 562, 609
AfaI	GTAC	1 cut(s)	581
AfiI	CCNNNNNNNGG	1 cut(s)	396
AflIII	ACRYGT	2 cut(s)	185, 621
AgsI	TTSAA	9 cut(s)	76, 386, 608, 689, 773, 818, 1026, 1159, 1316
AjnI	CCWGG	4 cut(s)	125, 582, 970, 1253
AjuI	GAANNNNNNNTTGG	2 cut(s)	1189, 1221
Alw21I	GWGCWC	1 cut(s)	1219
Alw26I	GTCTC	5 cut(s)	54, 98, 621, 1241, 1298
AlwNI	CAGNNNCTG	2 cut(s)	577, 1260
Ama87I	CYCGRG	1 cut(s)	101
AoxI	GGCC	3 cut(s)	129, 882, 1257
ApeKI	GCWGC	1 cut(s)	1202
ApoI	RAATTY	4 cut(s)	32, 226, 562, 609
AseI	ATTAAT	1 cut(s)	1383
Asp700I	GAANNNNTTC	1 cut(s)	788
AspS9I	GGNCC	2 cut(s)	129, 1257
AsuHPI	GGTGA	3 cut(s)	179, 367, 379
AsuII	TTCGAA	2 cut(s)	230, 1002
AvaI	CYCGRG	1 cut(s)	101
BanII	GRGCYC	1 cut(s)	1219
Bbv12I	GWGCWC	1 cut(s)	1219
BbvI	GCAGC	1 cut(s)	1189
BccI	CCATC	6 cut(s)	803, 818, 950, 1115, 1370, 1473
BcgI	CGANNNNNNTGC	2 cut(s)	734, 768
BciT130I	CCWGG	4 cut(s)	127, 584, 972, 1255
BclI	TGATCA	3 cut(s)	39, 1087, 1323
BcoDI	GTCTC	5 cut(s)	54, 98, 621, 1241, 1298
BfaI	CTAG	3 cut(s)	330, 945, 1280
BisI	GCNGC	2 cut(s)	237, 1203
BlsI	GCNGC	2 cut(s)	238, 1204
Bme1390I	CCNGG	4 cut(s)	127, 584, 972, 1255
BmeT110I	CYCGRG	1 cut(s)	101
BmgT120I	GGNCC	2 cut(s)	129, 1257
BmiI	GGNNCC	1 cut(s)	6
BmrFI	CCNGG	4 cut(s)	127, 584, 972, 1255
BmsI	GCATC	3 cut(s)	558, 1197, 1437
Bpu14I	TTCGAA	2 cut(s)	230, 1002
BpuEI	CTTGAG	1 cut(s)	1429
Bsa29I	ATCGAT	3 cut(s)	744, 954, 1179
BsaJI	CCNNGG	5 cut(s)	91, 126, 390, 885, 1254
BsaWI	WCCGGW	1 cut(s)	114
BsaXI	ACNNNNNCTCC	2 cut(s)	275, 305
Bsc4I	CCNNNNNNNGG	1 cut(s)	396
Bse118I	RCCGGY	1 cut(s)	131
Bse3DI	GCAATG	3 cut(s)	507, 786, 1429
BseBI	CCWGG	4 cut(s)	127, 584, 972, 1255
BseCI	ATCGAT	3 cut(s)	744, 954, 1179
BseDI	CCNNGG	5 cut(s)	91, 126, 390, 885, 1254
BseGI	GGATG	3 cut(s)	312, 804, 1279
BseLI	CCNNNNNNNGG	1 cut(s)	396
BseMI	GCAATG	3 cut(s)	507, 786, 1429
BseMII	CTCAG	2 cut(s)	1254, 1293
BseRI	GAGGAG	1 cut(s)	296
BseXI	GCAGC	1 cut(s)	1189
Bsh1236I	CGCG	2 cut(s)	392, 623
BshFI	GGCC	3 cut(s)	131, 884, 1259
BshVI	ATCGAT	3 cut(s)	744, 954, 1179
BsiHKAI	GWGCWC	1 cut(s)	1219
BsiHKCI	CYCGRG	1 cut(s)	101
BsiSI	CCGG	2 cut(s)	115, 132
BslFI	GGGAC	1 cut(s)	1181
BslI	CCNNNNNNNGG	1 cut(s)	396
BsmAI	GTCTC	5 cut(s)	54, 98, 621, 1241, 1298
BsmBI	CGTCTC	1 cut(s)	621
BsmFI	GGGAC	1 cut(s)	1181
BsmI	GAATGC	1 cut(s)	238
BsnI	GGCC	3 cut(s)	131, 884, 1259
BsoBI	CYCGRG	1 cut(s)	101
Bsp119I	TTCGAA	2 cut(s)	230, 1002
Bsp1286I	GDGCHC	1 cut(s)	1219
Bsp143I	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
Bsp19I	CCATGG	1 cut(s)	885
BspACI	CCGC	5 cut(s)	236, 390, 392, 397, 482
BspANI	GGCC	3 cut(s)	131, 884, 1259
BspCNI	CTCAG	2 cut(s)	1253, 1294
BspDI	ATCGAT	3 cut(s)	744, 954, 1179
BspFNI	CGCG	2 cut(s)	392, 623
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	1 cut(s)	6
BspQI	GCTCTTC	1 cut(s)	797
BspT104I	TTCGAA	2 cut(s)	230, 1002
BsrBI	CCGCTC	1 cut(s)	397
BsrDI	GCAATG	3 cut(s)	507, 786, 1429
BsrFI	RCCGGY	1 cut(s)	131
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	5 cut(s)	91, 126, 390, 885, 1254
BssMI	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
BssNAI	GTATAC	1 cut(s)	339
BssT1I	CCWWGG	1 cut(s)	885
Bst1107I	GTATAC	1 cut(s)	339
Bst2UI	CCWGG	4 cut(s)	127, 584, 972, 1255
Bst4CI	ACNGT	2 cut(s)	1096, 1393
Bst6I	CTCTTC	3 cut(s)	768, 797, 1143
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstBI	TTCGAA	2 cut(s)	230, 1002
BstC8I	GCNNGC	3 cut(s)	141, 1261, 1363
BstDEI	CTNAG	4 cut(s)	13, 203, 1240, 1302
BstDSI	CCRYGG	2 cut(s)	390, 885
BstF5I	GGATG	3 cut(s)	312, 804, 1279
BstFNI	CGCG	2 cut(s)	392, 623
BstKTI	GATC	7 cut(s)	42, 88, 744, 1014, 1090, 1179, 1326
BstMAI	GTCTC	5 cut(s)	54, 98, 621, 1241, 1298
BstMBI	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
BstMWI	GCNNNNNNNGC	3 cut(s)	722, 929, 1433
BstNI	CCWGG	4 cut(s)	127, 584, 972, 1255
BstNSI	RCATGY	1 cut(s)	189
BstSCI	CCNGG	4 cut(s)	125, 582, 970, 1253
BstUI	CGCG	2 cut(s)	392, 623
BstV1I	GCAGC	1 cut(s)	1189
BstZ17I	GTATAC	1 cut(s)	339
Bsu15I	ATCGAT	3 cut(s)	744, 954, 1179
BsuRI	GGCC	3 cut(s)	131, 884, 1259
BsuTUI	ATCGAT	3 cut(s)	744, 954, 1179
BtgI	CCRYGG	2 cut(s)	390, 885
BtgZI	GCGATG	1 cut(s)	822
BtsCI	GGATG	3 cut(s)	312, 804, 1279
Cac8I	GCNNGC	3 cut(s)	141, 1261, 1363
CaiI	CAGNNNCTG	2 cut(s)	577, 1260
CciI	TCATGA	1 cut(s)	636
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	2 cut(s)	129, 1257
Cfr42I	CCGCGG	1 cut(s)	393
ClaI	ATCGAT	3 cut(s)	744, 954, 1179
Csp6I	GTAC	1 cut(s)	580
CviAII	CATG	5 cut(s)	186, 637, 886, 1171, 1451
CviQI	GTAC	1 cut(s)	580
DdeI	CTNAG	4 cut(s)	13, 203, 1240, 1302
DpnI	GATC	7 cut(s)	41, 87, 743, 1013, 1089, 1178, 1325
DpnII	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
Eam1104I	CTCTTC	3 cut(s)	768, 797, 1143
EarI	CTCTTC	3 cut(s)	768, 797, 1143
Ecl136II	GAGCTC	1 cut(s)	1217
Eco130I	CCWWGG	1 cut(s)	885
Eco24I	GRGCYC	1 cut(s)	1219
Eco53kI	GAGCTC	1 cut(s)	1217
Eco88I	CYCGRG	1 cut(s)	101
EcoICRI	GAGCTC	1 cut(s)	1217
EcoO109I	RGGNCCY	1 cut(s)	1257
EcoRI	GAATTC	1 cut(s)	226
EcoRII	CCWGG	4 cut(s)	125, 582, 970, 1253
EcoT14I	CCWWGG	1 cut(s)	885
EcoT22I	ATGCAT	1 cut(s)	1452
EcoT38I	GRGCYC	1 cut(s)	1219
ErhI	CCWWGG	1 cut(s)	885
Esp3I	CGTCTC	1 cut(s)	621
FaeI	CATG	5 cut(s)	189, 640, 889, 1174, 1454
FalI	AAGNNNNNCTT	2 cut(s)	200, 232
FaqI	GGGAC	1 cut(s)	1181
FatI	CATG	5 cut(s)	185, 636, 885, 1170, 1450
FauI	CCCGC	2 cut(s)	390, 475
FauNDI	CATATG	2 cut(s)	67, 751
FbaI	TGATCA	3 cut(s)	39, 1087, 1323
FblI	GTMKAC	1 cut(s)	338
Fnu4HI	GCNGC	2 cut(s)	237, 1203
FokI	GGATG	3 cut(s)	319, 811, 1286
FriOI	GRGCYC	1 cut(s)	1219
Fsp4HI	GCNGC	2 cut(s)	237, 1203
FspBI	CTAG	3 cut(s)	330, 945, 1280
GluI	GCNGC	2 cut(s)	237, 1203
HaeIII	GGCC	3 cut(s)	131, 884, 1259
HapII	CCGG	2 cut(s)	115, 132
Hin1II	CATG	5 cut(s)	189, 640, 889, 1174, 1454
HindIII	AAGCTT	3 cut(s)	785, 1047, 1359
HinfI	GANTC	3 cut(s)	17, 386, 746
HpaII	CCGG	2 cut(s)	115, 132
HphI	GGTGA	3 cut(s)	179, 367, 379
Hpy166II	GTNNAC	2 cut(s)	339, 370
Hpy188I	TCNGA	4 cut(s)	82, 92, 1092, 1214
Hpy188III	TCNNGA	4 cut(s)	37, 637, 793, 1301
Hpy8I	GTNNAC	2 cut(s)	339, 370
HpyAV	CCTTC	7 cut(s)	304, 410, 490, 592, 697, 969, 1073
HpyCH4III	ACNGT	2 cut(s)	1096, 1393
HpyF10VI	GCNNNNNNNGC	3 cut(s)	722, 929, 1433
HpyF3I	CTNAG	4 cut(s)	13, 203, 1240, 1302
Hsp92II	CATG	5 cut(s)	189, 640, 889, 1174, 1454
Ksp22I	TGATCA	3 cut(s)	39, 1087, 1323
KspI	CCGCGG	1 cut(s)	393
Kzo9I	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
LguI	GCTCTTC	1 cut(s)	797
LmnI	GCTCC	2 cut(s)	394, 1135
Lsp1109I	GCAGC	1 cut(s)	1189
LweI	GCATC	3 cut(s)	558, 1197, 1437
MaeI	CTAG	3 cut(s)	330, 945, 1280
MaeIII	GTNAC	2 cut(s)	442, 829
MalI	GATC	7 cut(s)	41, 87, 743, 1013, 1089, 1178, 1325
MbiI	CCGCTC	1 cut(s)	397
MboI	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
MboII	GAAGA	6 cut(s)	436, 701, 785, 814, 1160, 1328
MfeI	CAATTG	1 cut(s)	1224
MhlI	GDGCHC	1 cut(s)	1219
MluCI	AATT	9 cut(s)	32, 55, 226, 241, 562, 609, 1224, 1296, 1367
MluI	ACGCGT	1 cut(s)	621
MlyI	GAGTC	1 cut(s)	11
Mph1103I	ATGCAT	1 cut(s)	1452
MroXI	GAANNNNTTC	1 cut(s)	788
MseI	TTAA	6 cut(s)	252, 462, 950, 1062, 1131, 1383
MslI	CAYNNNNRTG	1 cut(s)	1143
MspA1I	CMGCKG	1 cut(s)	392
MspI	CCGG	2 cut(s)	115, 132
MspR9I	CCNGG	4 cut(s)	127, 584, 972, 1255
MunI	CAATTG	1 cut(s)	1224
Mva1269I	GAATGC	1 cut(s)	238
MvaI	CCWGG	4 cut(s)	127, 584, 972, 1255
MvnI	CGCG	2 cut(s)	392, 623
MwoI	GCNNNNNNNGC	3 cut(s)	722, 929, 1433
NcoI	CCATGG	1 cut(s)	885
NdeI	CATATG	2 cut(s)	67, 751
NdeII	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
NlaIII	CATG	5 cut(s)	189, 640, 889, 1174, 1454
NlaIV	GGNNCC	1 cut(s)	6
NmuCI	GTSAC	1 cut(s)	442
NsiI	ATGCAT	1 cut(s)	1452
NspI	RCATGY	1 cut(s)	189
NspV	TTCGAA	2 cut(s)	230, 1002
PagI	TCATGA	1 cut(s)	636
PciI	ACATGT	1 cut(s)	185
PciSI	GCTCTTC	1 cut(s)	797
PcsI	WCGNNNNNNNCGW	1 cut(s)	236
PctI	GAATGC	1 cut(s)	238
PdmI	GAANNNNTTC	1 cut(s)	788
PfeI	GAWTC	2 cut(s)	386, 746
PkrI	GCNGC	2 cut(s)	238, 1204
PleI	GAGTC	1 cut(s)	11
PpsI	GAGTC	1 cut(s)	11
PscI	ACATGT	1 cut(s)	185
PshBI	ATTAAT	1 cut(s)	1383
PsiI	TTATAA	1 cut(s)	450
Psp124BI	GAGCTC	1 cut(s)	1219
Psp6I	CCWGG	4 cut(s)	125, 582, 970, 1253
PspGI	CCWGG	4 cut(s)	125, 582, 970, 1253
PspN4I	GGNNCC	1 cut(s)	6
PspPI	GGNCC	2 cut(s)	129, 1257
PstNI	CAGNNNCTG	2 cut(s)	577, 1260
RsaI	GTAC	1 cut(s)	581
RsaNI	GTAC	1 cut(s)	580
RseI	CAYNNNNRTG	1 cut(s)	1143
SacI	GAGCTC	1 cut(s)	1219
SacII	CCGCGG	1 cut(s)	393
SapI	GCTCTTC	1 cut(s)	797
SaqAI	TTAA	6 cut(s)	252, 462, 950, 1062, 1131, 1383
SatI	GCNGC	2 cut(s)	237, 1203
Sau3AI	GATC	7 cut(s)	39, 85, 741, 1011, 1087, 1176, 1323
Sau96I	GGNCC	2 cut(s)	129, 1257
SchI	GAGTC	1 cut(s)	11
ScrFI	CCNGG	4 cut(s)	127, 584, 972, 1255
SduI	GDGCHC	1 cut(s)	1219
SfaNI	GCATC	3 cut(s)	558, 1197, 1437
Sfr303I	CCGCGG	1 cut(s)	393
SfuI	TTCGAA	2 cut(s)	230, 1002
SgrBI	CCGCGG	1 cut(s)	393
SmiMI	CAYNNNNRTG	1 cut(s)	1143
SmlI	CTYRAG	1 cut(s)	1408
SmoI	CTYRAG	1 cut(s)	1408
Sse9I	AATT	9 cut(s)	32, 55, 226, 241, 562, 609, 1224, 1296, 1367
SsiI	CCGC	5 cut(s)	236, 390, 392, 397, 482
SspMI	CTAG	3 cut(s)	330, 945, 1280
SstI	GAGCTC	1 cut(s)	1219
StyD4I	CCNGG	4 cut(s)	125, 582, 970, 1253
StyI	CCWWGG	1 cut(s)	885
TaaI	ACNGT	2 cut(s)	1096, 1393
TaqI	TCGA	9 cut(s)	230, 374, 405, 744, 792, 954, 1002, 1179, 1387
TaqII	GACCGA	1 cut(s)	1491
TasI	AATT	9 cut(s)	32, 55, 226, 241, 562, 609, 1224, 1296, 1367
TauI	GCSGC	1 cut(s)	239
TfiI	GAWTC	2 cut(s)	386, 746
Tru1I	TTAA	6 cut(s)	252, 462, 950, 1062, 1131, 1383
Tru9I	TTAA	6 cut(s)	252, 462, 950, 1062, 1131, 1383
TseFI	GTSAC	1 cut(s)	442
TseI	GCWGC	1 cut(s)	1202
Tsp45I	GTSAC	1 cut(s)	442
TspGWI	ACGGA	2 cut(s)	603, 1499
VspI	ATTAAT	1 cut(s)	1383
XapI	RAATTY	4 cut(s)	32, 226, 562, 609
XceI	RCATGY	1 cut(s)	189
XmiI	GTMKAC	1 cut(s)	338
XmnI	GAANNNNTTC	1 cut(s)	788
XspI	CTAG	3 cut(s)	330, 945, 1280
Zsp2I	ATGCAT	1 cut(s)	1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.