Rh2DG585100

Pentatricopeptide repeat-containing protein At1g03560

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0003325
Physical Location & Seq
Reverse (-)
81610194 .. 81613722
3529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG585100.1

Sequence Viewer

Length: 1962 bp
ATGAGAAGAAGCCTACTCAGACTCAGGGCTTCTTCAGCAACCCATGTCCTTCCTCCATGGCCTCCTCCTTCCTACTACAATGGTGGGTCTTCATCAAAAGCCTCAAACTTTCAGTCCACGTCAGCTTTCAGCTCAAATTCCAGGTGGGTCGTCGTCACCAACTCTCTTCCTCCACCAGAATGGGTAGAGCCTTTCAATGACGTCTCTGACATAGTCTCGAGCCCACAACGCTTCGACCCATCTCCATGGGTCGCCCAAATTCTCAATCTCTTAGACGGGTCTCCGCAGATGGAACCCAACTTAGACTCTTACTGCCACAAATTCCTGATCAAACTGTCTCCCAATTTCGTTGCACATGTGTTGAAATCTGATGATCTCCGAGGAAAGCCCGAGACTGCTCTCCGGTTTTTCTCCTGGGCCGGTAAGCAAAAGAAGTATCATCATAAGCTTGAATGCTATGTGTCTTTGATTGAGCTTTTGTGTTTGTGTGGTGATTTGGGTAGGATTAGATGTGTTGTTGTTGAGCTTAAAAAGATGAACTTTTTGATGAATTCGAATGCGGCGAATTGTTTGATTAAGAGCTTTGGCTGTCTTGGAATGGTTGAGGAGTTGTTGTGGGTTTGGCGTGGGATGAAGGAGAATGGGATTGAGCCTAGTTTGTATACTTATAACTTTTTGGTGAATGGATTGGTGAACTCGATGTTTATTGAATCCGCGGAGCGGGTTTTTGAGGTTATGGAAGGTGGGAAGATTGTGCCTGACATTGTGACTTATAATACAATGACTAAAGGGTATTGTAAGGCAGGGAAAACCCTGAAGGCAATGGAGAAGTTTAGGGATATGGAGGGGAGGAATGTGGAGGCTGATAAGATTACTTATATGACTTTGATGCAGGGGTGTTATTCGGAAGGAGATTTAGATTCATGTTTGAGTCTGTACCAGGAAATGAGAGAGAAGGGGATTGAAATTCCGTCTCACGCGTATAGTTTAGTCATCAATGGGCTATGTAAAGGTGGGAAATGTATGGTTGGGTATGCTGTTTTTGAAGATATGATTGAGAAGGGTTGTAAAGCAAATGTGGCAAACTATACAGCTTTGATCGATTCATATGCAAAATGTGGGTGCATTGAAGAGGCAATGAAGCTTTTCGAGAGGATGAAGAGTGATGGGCTTGAACCAGATGGGGTTACTTATGGGGTTATTGTCAATGGATTATGTAAGAGTGGGAGATTGGAGAAGGCCATGGAGTATTTTCAGTTTTGTCAAAACAGCAGAATGGCAGACAATGTTATGTTATATTCTAGTTTAATCGATGGTCTTGGAAAGGCTGGAAGGGTTGGTGAAGCTGAAAGCGTATTCGAAAAGATGATCGAAAAGGGTTGTCCACCGGATTCATACTGCTATAATGCCCTTATCGATGCCCTAGCAAAATGTGGAAAAACTGATGAAGCTTTAGCACTCTTTAAGAAAATGGAAAAAGAAGGTTGTGATCAGACCGTTTATACATACACAATACTCATTGATGGACTATTTAAGGAGCATAGGAATGAAGAGGCATTGAAGCTGTGGGACATGATGATCGATAAAGGCATCACACCAACTGCTGCTTCATTCAGAGCTCTCTCAATTGGGCTTTGTCTCTCAGGCAAAGTAGCCAGGGCCTGCAAGATTTTGGATGACCTAGCACCAATGGGCGTAATTCCTGAGATAGCTTTTGAAGATATGATCAATGTGTTGTGCAAAGCTGGTCGTGTCAAGGAAGCTTGCAAATTGGCTGATGGCATTGTGGATAGAGGTAGGGAAATACCAGGAAGAATTCGAACTGTTCTGATCAATGCCTTGAGGAAAACAGGCAATGCAGATTTAGCTATGAAGTTGACGCATAGTAAGATTGGTATTGGGTATGACCGATGGGGTAGTGTCAAAAAGCGAGTGAAGTTCCGTATTCTCATTGACATTTGA

Protein Analysis

653

Amino Acids

72.88

Weight (kDa)

8.15

Isoelectric Point (pI)

36.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 185 - 232 7.6e-08 PPR repeat family
PPR_3 PF13812 209 - 263 5.2e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 251 - 282 7.7e-10 PPR repeat
PPR_2 PF13041 253 - 300 4.1e-13 PPR repeat family
PPR PF01535 256 - 286 3.9e-07 PPR repeat
PPR_2 PF13041 290 - 337 3.9e-11 PPR repeat family
PPR PF01535 291 - 321 1.5e-06 PPR repeat
PPR_long PF17177 296 - 416 2.3e-13 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 326 - 368 2.7e-06 PPR repeat family
TPR_24 PF23276 346 - 455 1.8e-06 Fungal tetratrico peptide repeats
PPR_3 PF13812 347 - 403 3.4e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 354 - 387 5.3e-08 PPR repeat
PPR_2 PF13041 359 - 407 1.6e-15 PPR repeat family
PPR PF01535 363 - 391 3.1e-09 PPR repeat
PPR_1 PF12854 389 - 418 8.3e-09 PPR repeat
PPR_2 PF13041 429 - 477 3.9e-14 PPR repeat family
PPR_1 PF12854 429 - 456 1.2e-07 PPR repeat
PPR PF01535 433 - 461 1.3e-08 PPR repeat
PPR_1 PF12854 459 - 492 5.9e-11 PPR repeat
PPR_3 PF13812 463 - 507 1.6e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 466 - 512 5.2e-16 PPR repeat family
PPR PF01535 467 - 496 1.1e-09 PPR repeat
PPR_1 PF12854 495 - 526 3.5e-07 PPR repeat
PPR PF01535 501 - 531 3.3e-06 PPR repeat
PPR_2 PF13041 506 - 546 5.5e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 669, 774
AatII GACGTC 1 cut(s) 204
AccBSI CCGCTC 1 cut(s) 721
AccI GTMKAC 1 cut(s) 662
AccII CGCG 2 cut(s) 716, 980
AciI CCGC 5 cut(s) 284, 560, 714, 716, 721
AcsI RAATTY 6 cut(s) 136, 258, 320, 550, 966, 1815
AcuI CTGAAG 2 cut(s) 18, 836
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 1 cut(s) 938
AfiI CCNNNNNNNGG 1 cut(s) 720
AflIII ACRYGT 2 cut(s) 355, 978
AjiI CACGTC 1 cut(s) 120
AjnI CCWGG 5 cut(s) 140, 413, 939, 1655, 1807
AjuI GAANNNNNNNTTGG 2 cut(s) 1591, 1623
Alw21I GWGCWC 1 cut(s) 1621
Alw26I GTCTC 7 cut(s) 208, 220, 285, 342, 386, 978, 1643
AlwNI CAGNNNCTG 1 cut(s) 1662
Ama87I CYCGRG 2 cut(s) 217, 389
AoxI GGCC 4 cut(s) 59, 417, 1239, 1659
ApeKI GCWGC 1 cut(s) 1604
ApoI RAATTY 6 cut(s) 136, 258, 320, 550, 966, 1815
ArsI GACNNNNNNTTYG 2 cut(s) 98, 130
Asp700I GAANNNNTTC 1 cut(s) 1145
AspS9I GGNCC 2 cut(s) 417, 1659
AsuHPI GGTGA 5 cut(s) 148, 503, 691, 703, 1352
AsuII TTCGAA 3 cut(s) 554, 1359, 1819
AvaI CYCGRG 2 cut(s) 217, 389
BanII GRGCYC 2 cut(s) 224, 1621
BbsI GAAGAC 1 cut(s) 81
Bbv12I GWGCWC 1 cut(s) 1621
BbvI GCAGC 1 cut(s) 1591
BccI CCATC 8 cut(s) 247, 283, 1160, 1175, 1307, 1517, 1772, 1905
BcgI CGANNNNNNTGC 2 cut(s) 1091, 1125
BciT130I CCWGG 5 cut(s) 142, 415, 941, 1657, 1809
BclI TGATCA 4 cut(s) 327, 1489, 1725, 1830
BcoDI GTCTC 7 cut(s) 208, 220, 285, 342, 386, 978, 1643
BfaI CTAG 4 cut(s) 654, 1302, 1424, 1682
BisI GCNGC 2 cut(s) 561, 1605
BlsI GCNGC 2 cut(s) 562, 1606
Bme1390I CCNGG 5 cut(s) 142, 415, 941, 1657, 1809
BmeT110I CYCGRG 2 cut(s) 217, 389
BmgBI CACGTC 1 cut(s) 120
BmgT120I GGNCC 2 cut(s) 417, 1659
BmiI GGNNCC 1 cut(s) 294
BmrFI CCNGG 5 cut(s) 142, 415, 941, 1657, 1809
BmsI GCATC 3 cut(s) 879, 1408, 1599
BpiI GAAGAC 1 cut(s) 81
Bpu14I TTCGAA 3 cut(s) 554, 1359, 1819
BpuEI CTTGAG 1 cut(s) 1861
Bsa29I ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 7 cut(s) 56, 245, 379, 414, 714, 1242, 1656
BsaWI WCCGGW 2 cut(s) 402, 1387
BsaXI ACNNNNNCTCC 2 cut(s) 599, 629
Bsc4I CCNNNNNNNGG 1 cut(s) 720
Bse118I RCCGGY 1 cut(s) 419
Bse3DI GCAATG 3 cut(s) 828, 1143, 1861
BseBI CCWGG 5 cut(s) 142, 415, 941, 1657, 1809
BseCI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BseDI CCNNGG 7 cut(s) 56, 245, 379, 414, 714, 1242, 1656
BseGI GGATG 3 cut(s) 636, 1161, 1681
BseLI CCNNNNNNNGG 1 cut(s) 720
BseMI GCAATG 3 cut(s) 828, 1143, 1861
BseMII CTCAG 4 cut(s) 31, 37, 1656, 1695
BseRI GAGGAG 2 cut(s) 54, 620
BseXI GCAGC 1 cut(s) 1591
Bsh1236I CGCG 2 cut(s) 716, 980
BshFI GGCC 4 cut(s) 61, 419, 1241, 1661
BshVI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BsiHKAI GWGCWC 1 cut(s) 1621
BsiHKCI CYCGRG 2 cut(s) 217, 389
BsiSI CCGG 3 cut(s) 403, 420, 1388
BslFI GGGAC 1 cut(s) 1583
BslI CCNNNNNNNGG 1 cut(s) 720
BsmAI GTCTC 7 cut(s) 208, 220, 285, 342, 386, 978, 1643
BsmBI CGTCTC 2 cut(s) 208, 978
BsmFI GGGAC 1 cut(s) 1583
BsmI GAATGC 2 cut(s) 458, 562
BsnI GGCC 4 cut(s) 61, 419, 1241, 1661
Bso31I GGTCTC 1 cut(s) 285
BsoBI CYCGRG 2 cut(s) 217, 389
Bsp119I TTCGAA 3 cut(s) 554, 1359, 1819
Bsp1286I GDGCHC 2 cut(s) 224, 1621
Bsp143I GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
Bsp19I CCATGG 3 cut(s) 56, 245, 1242
BspACI CCGC 5 cut(s) 284, 560, 714, 716, 721
BspANI GGCC 4 cut(s) 61, 419, 1241, 1661
BspCNI CTCAG 4 cut(s) 30, 36, 1655, 1696
BspDI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BspFNI CGCG 2 cut(s) 716, 980
BspLI GGNNCC 1 cut(s) 294
BspT104I TTCGAA 3 cut(s) 554, 1359, 1819
BspTNI GGTCTC 1 cut(s) 285
BsrBI CCGCTC 1 cut(s) 721
BsrDI GCAATG 3 cut(s) 828, 1143, 1861
BsrFI RCCGGY 1 cut(s) 419
BssAI RCCGGY 1 cut(s) 419
BssECI CCNNGG 7 cut(s) 56, 245, 379, 414, 714, 1242, 1656
BssMI GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
BssNAI GTATAC 1 cut(s) 663
BssNI GRCGYC 1 cut(s) 201
BssT1I CCWWGG 3 cut(s) 56, 245, 1242
Bst1107I GTATAC 1 cut(s) 663
Bst2UI CCWGG 5 cut(s) 142, 415, 941, 1657, 1809
Bst4CI ACNGT 3 cut(s) 336, 1498, 1825
Bst6I CTCTTC 4 cut(s) 171, 1125, 1154, 1545
BstACI GRCGYC 1 cut(s) 201
BstBI TTCGAA 3 cut(s) 554, 1359, 1819
BstC8I GCNNGC 2 cut(s) 1663, 1765
BstDEI CTNAG 6 cut(s) 17, 23, 271, 301, 1642, 1704
BstDSI CCRYGG 4 cut(s) 56, 245, 714, 1242
BstF5I GGATG 3 cut(s) 636, 1161, 1681
BstFNI CGCG 2 cut(s) 716, 980
BstKTI GATC 8 cut(s) 330, 376, 1101, 1371, 1492, 1581, 1728, 1833
BstMAI GTCTC 7 cut(s) 208, 220, 285, 342, 386, 978, 1643
BstMBI GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
BstMWI GCNNNNNNNGC 4 cut(s) 35, 228, 1079, 1865
BstNI CCWGG 5 cut(s) 142, 415, 941, 1657, 1809
BstNSI RCATGY 1 cut(s) 359
BstSCI CCNGG 5 cut(s) 140, 413, 939, 1655, 1807
BstUI CGCG 2 cut(s) 716, 980
BstV1I GCAGC 1 cut(s) 1591
BstV2I GAAGAC 1 cut(s) 81
BstXI CCANNNNNNTGG 2 cut(s) 180, 246
BstZ17I GTATAC 1 cut(s) 663
Bsu15I ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BsuRI GGCC 4 cut(s) 61, 419, 1241, 1661
BsuTUI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
BtgI CCRYGG 4 cut(s) 56, 245, 714, 1242
BtrI CACGTC 1 cut(s) 120
BtsCI GGATG 3 cut(s) 636, 1161, 1681
Cac8I GCNNGC 2 cut(s) 1663, 1765
CaiI CAGNNNCTG 1 cut(s) 1662
Cfr10I RCCGGY 1 cut(s) 419
Cfr13I GGNCC 2 cut(s) 417, 1659
Cfr42I CCGCGG 1 cut(s) 717
ClaI ATCGAT 4 cut(s) 1101, 1311, 1416, 1581
CseI GACGC 1 cut(s) 1888
Csp6I GTAC 1 cut(s) 937
CviAII CATG 7 cut(s) 44, 57, 246, 356, 924, 1243, 1573
CviQI GTAC 1 cut(s) 937
DdeI CTNAG 6 cut(s) 17, 23, 271, 301, 1642, 1704
DpnI GATC 8 cut(s) 329, 375, 1100, 1370, 1491, 1580, 1727, 1832
DpnII GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
Eam1104I CTCTTC 4 cut(s) 171, 1125, 1154, 1545
EarI CTCTTC 4 cut(s) 171, 1125, 1154, 1545
Ecl136II GAGCTC 1 cut(s) 1619
Eco130I CCWWGG 3 cut(s) 56, 245, 1242
Eco24I GRGCYC 2 cut(s) 224, 1621
Eco31I GGTCTC 1 cut(s) 285
Eco53kI GAGCTC 1 cut(s) 1619
Eco57I CTGAAG 2 cut(s) 18, 836
Eco88I CYCGRG 2 cut(s) 217, 389
EcoICRI GAGCTC 1 cut(s) 1619
EcoO109I RGGNCCY 1 cut(s) 1659
EcoRI GAATTC 2 cut(s) 550, 1815
EcoRII CCWGG 5 cut(s) 140, 413, 939, 1655, 1807
EcoT14I CCWWGG 3 cut(s) 56, 245, 1242
EcoT38I GRGCYC 2 cut(s) 224, 1621
ErhI CCWWGG 3 cut(s) 56, 245, 1242
Esp3I CGTCTC 2 cut(s) 208, 978
FaeI CATG 7 cut(s) 47, 60, 249, 359, 927, 1246, 1576
FalI AAGNNNNNCTT 2 cut(s) 524, 556
FaqI GGGAC 1 cut(s) 1583
FatI CATG 7 cut(s) 43, 56, 245, 355, 923, 1242, 1572
FauI CCCGC 1 cut(s) 714
FauNDI CATATG 1 cut(s) 1108
FbaI TGATCA 4 cut(s) 327, 1489, 1725, 1830
FblI GTMKAC 1 cut(s) 662
Fnu4HI GCNGC 2 cut(s) 561, 1605
FokI GGATG 3 cut(s) 643, 1168, 1688
FriOI GRGCYC 2 cut(s) 224, 1621
Fsp4HI GCNGC 2 cut(s) 561, 1605
FspBI CTAG 4 cut(s) 654, 1302, 1424, 1682
GluI GCNGC 2 cut(s) 561, 1605
HaeIII GGCC 4 cut(s) 61, 419, 1241, 1661
HapII CCGG 3 cut(s) 403, 420, 1388
HgaI GACGC 1 cut(s) 1888
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 7 cut(s) 47, 60, 249, 359, 927, 1246, 1576
HincII GTYRAC 1 cut(s) 1878
HindII GTYRAC 1 cut(s) 1878
HindIII AAGCTT 4 cut(s) 446, 1142, 1449, 1761
HinfI GANTC 7 cut(s) 21, 305, 710, 920, 931, 1103, 1391
HpaII CCGG 3 cut(s) 403, 420, 1388
HphI GGTGA 5 cut(s) 148, 503, 691, 703, 1352
Hpy166II GTNNAC 5 cut(s) 117, 663, 694, 1385, 1878
Hpy188I TCNGA 8 cut(s) 20, 208, 370, 380, 907, 1494, 1616, 1830
Hpy188III TCNNGA 4 cut(s) 217, 325, 1150, 1703
Hpy8I GTNNAC 5 cut(s) 117, 663, 694, 1385, 1878
Hpy99I CGWCG 1 cut(s) 155
HpyCH4III ACNGT 3 cut(s) 336, 1498, 1825
HpyCH4IV ACGT 2 cut(s) 119, 201
HpyCH4V TGCA 8 cut(s) 353, 892, 1112, 1125, 1665, 1740, 1767, 1859
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 228, 1079, 1865
HpyF3I CTNAG 6 cut(s) 17, 23, 271, 301, 1642, 1704
HpySE526I ACGT 2 cut(s) 119, 201
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 7 cut(s) 47, 60, 249, 359, 927, 1246, 1576
Ksp22I TGATCA 4 cut(s) 327, 1489, 1725, 1830
KspI CCGCGG 1 cut(s) 717
Kzo9I GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
LmnI GCTCC 2 cut(s) 718, 1537
Lsp1109I GCAGC 1 cut(s) 1591
LweI GCATC 3 cut(s) 879, 1408, 1599
MaeI CTAG 4 cut(s) 654, 1302, 1424, 1682
MaeII ACGT 2 cut(s) 119, 201
MaeIII GTNAC 3 cut(s) 154, 766, 1186
MalI GATC 8 cut(s) 329, 375, 1100, 1370, 1491, 1580, 1727, 1832
MbiI CCGCTC 1 cut(s) 721
MboI GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
MfeI CAATTG 1 cut(s) 1626
MhlI GDGCHC 2 cut(s) 224, 1621
MluI ACGCGT 1 cut(s) 978
MlyI GAGTC 3 cut(s) 15, 299, 940
MroXI GAANNNNTTC 1 cut(s) 1145
MseI TTAA 5 cut(s) 528, 576, 1307, 1464, 1533
MslI CAYNNNNRTG 3 cut(s) 178, 244, 1545
MspA1I CMGCKG 1 cut(s) 716
MspI CCGG 3 cut(s) 403, 420, 1388
MspR9I CCNGG 5 cut(s) 142, 415, 941, 1657, 1809
MunI CAATTG 1 cut(s) 1626
Mva1269I GAATGC 2 cut(s) 458, 562
MvaI CCWGG 5 cut(s) 142, 415, 941, 1657, 1809
MvnI CGCG 2 cut(s) 716, 980
MwoI GCNNNNNNNGC 4 cut(s) 35, 228, 1079, 1865
NcoI CCATGG 3 cut(s) 56, 245, 1242
NdeI CATATG 1 cut(s) 1108
NdeII GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
NlaIII CATG 7 cut(s) 47, 60, 249, 359, 927, 1246, 1576
NlaIV GGNNCC 1 cut(s) 294
NmuCI GTSAC 2 cut(s) 154, 766
NspI RCATGY 1 cut(s) 359
NspV TTCGAA 3 cut(s) 554, 1359, 1819
PaeR7I CTCGAG 1 cut(s) 217
PciI ACATGT 1 cut(s) 355
PcsI WCGNNNNNNNCGW 1 cut(s) 560
PctI GAATGC 2 cut(s) 458, 562
PdmI GAANNNNTTC 1 cut(s) 1145
PfeI GAWTC 4 cut(s) 710, 920, 1103, 1391
PflFI GACNNNGTC 1 cut(s) 212
PkrI GCNGC 2 cut(s) 562, 1606
PleI GAGTC 3 cut(s) 15, 299, 939
PpsI GAGTC 3 cut(s) 15, 299, 939
PscI ACATGT 1 cut(s) 355
PsiI TTATAA 2 cut(s) 669, 774
Psp124BI GAGCTC 1 cut(s) 1621
Psp6I CCWGG 5 cut(s) 140, 413, 939, 1655, 1807
PspGI CCWGG 5 cut(s) 140, 413, 939, 1655, 1807
PspN4I GGNNCC 1 cut(s) 294
PspPI GGNCC 2 cut(s) 417, 1659
PstNI CAGNNNCTG 1 cut(s) 1662
PsyI GACNNNGTC 1 cut(s) 212
RsaI GTAC 1 cut(s) 938
RsaNI GTAC 1 cut(s) 937
RseI CAYNNNNRTG 3 cut(s) 178, 244, 1545
SacI GAGCTC 1 cut(s) 1621
SacII CCGCGG 1 cut(s) 717
SaqAI TTAA 5 cut(s) 528, 576, 1307, 1464, 1533
SatI GCNGC 2 cut(s) 561, 1605
Sau3AI GATC 8 cut(s) 327, 373, 1098, 1368, 1489, 1578, 1725, 1830
Sau96I GGNCC 2 cut(s) 417, 1659
SchI GAGTC 3 cut(s) 15, 299, 940
ScrFI CCNGG 5 cut(s) 142, 415, 941, 1657, 1809
SduI GDGCHC 2 cut(s) 224, 1621
SfaNI GCATC 3 cut(s) 879, 1408, 1599
Sfr274I CTCGAG 1 cut(s) 217
Sfr303I CCGCGG 1 cut(s) 717
SfuI TTCGAA 3 cut(s) 554, 1359, 1819
SgrBI CCGCGG 1 cut(s) 717
SlaI CTCGAG 1 cut(s) 217
SmiMI CAYNNNNRTG 3 cut(s) 178, 244, 1545
SmlI CTYRAG 2 cut(s) 217, 1840
SmoI CTYRAG 2 cut(s) 217, 1840
SsiI CCGC 5 cut(s) 284, 560, 714, 716, 721
SspMI CTAG 4 cut(s) 654, 1302, 1424, 1682
SstI GAGCTC 1 cut(s) 1621
StyD4I CCNGG 5 cut(s) 140, 413, 939, 1655, 1807
StyI CCWWGG 3 cut(s) 56, 245, 1242
TaaI ACNGT 3 cut(s) 336, 1498, 1825
TaiI ACGT 2 cut(s) 122, 204
TaqII GACCGA 1 cut(s) 1923
TauI GCSGC 1 cut(s) 563
TfiI GAWTC 4 cut(s) 710, 920, 1103, 1391
Tru1I TTAA 5 cut(s) 528, 576, 1307, 1464, 1533
Tru9I TTAA 5 cut(s) 528, 576, 1307, 1464, 1533
TseFI GTSAC 2 cut(s) 154, 766
TseI GCWGC 1 cut(s) 1604
Tsp45I GTSAC 2 cut(s) 154, 766
TspGWI ACGGA 2 cut(s) 960, 1931
Tth111I GACNNNGTC 1 cut(s) 212
XapI RAATTY 6 cut(s) 136, 258, 320, 550, 966, 1815
XceI RCATGY 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 217
XmiI GTMKAC 1 cut(s) 662
XmnI GAANNNNTTC 1 cut(s) 1145
XspI CTAG 4 cut(s) 654, 1302, 1424, 1682
ZraI GACGTC 1 cut(s) 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.