Ankyrin repeats (many copies)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01750 AT3G01750 |
| fragaria_vesca | FvH4_4g24410 FvH4_4g24410 FvH4_4g24410 FvH4_6g52800 FvH4_6g52800 |
| malus_domestica | MD09G1016700.v1.1 MD13G1111600.v1.1 MD16G1111200.v1.1 MD17G1017100.v1.1 |
| prunus_persica | Prupe.1G233900_v2.0.a1 Prupe.3G300800_v2.0.a1 Prupe.3G300800_v2.0.a1 |
| pyrus_communis | pycom111g01360 pycom13g09690 pycom16g09420 pycom17g01380 |
| rosa_chinensis | RchiOBHm_Chr2g0174421 RchiOBHm_Chr4g0431261 |
| rosa_laevigata | RLG00000006915 RLG00000022264 |
| rosa_multiflora | Rmu_co8370771.1_g000001 Rmu_sc0002637.1_g000004 Rmu_sc0003649.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00078230 Rroxscaffold_5G00372800 |
| rosa_rugosa | Rorug02G0576600 Rorug02G0576700 Rorug02G0576800 Rorug02G0576900 Rorug02G0577000 Rorug04G0249700 |
| rosa_samantha | Rh2AG657800 Rh2BG668900 Rh2CG631800 Rh2DG682400 Rh4AG305600 Rh4BG313000 Rh4CG329200 Rh4DG309400 |
| rosa_wichuraiana | Rw2G053880 Rw4G026570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 546 |
| AccI | GTMKAC | 1 cut(s) | 1322 |
| AccII | CGCG | 4 cut(s) | 487, 1104, 1500, 1765 |
| AciI | CCGC | 5 cut(s) | 118, 485, 569, 1102, 1686 |
| AclWI | GGATC | 3 cut(s) | 657, 670, 1526 |
| AcsI | RAATTY | 4 cut(s) | 162, 531, 1549, 1897 |
| AcuI | CTGAAG | 2 cut(s) | 965, 1446 |
| AfaI | GTAC | 2 cut(s) | 1341, 1450 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 922, 1108 |
| AflIII | ACRYGT | 1 cut(s) | 229 |
| AgeI | ACCGGT | 1 cut(s) | 1342 |
| AgsI | TTSAA | 8 cut(s) | 610, 659, 812, 980, 1334, 1398, 1546, 1999 |
| AjnI | CCWGG | 3 cut(s) | 1279, 1753, 1965 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 384, 416, 1682, 1714 |
| Alw21I | GWGCWC | 3 cut(s) | 38, 114, 229 |
| Alw26I | GTCTC | 4 cut(s) | 36, 170, 744, 1083 |
| Alw44I | GTGCAC | 1 cut(s) | 225 |
| AlwI | GGATC | 3 cut(s) | 657, 670, 1526 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 686, 943, 1469 |
| AoxI | GGCC | 6 cut(s) | 793, 1009, 1145, 1511, 1620, 1756 |
| ApaLI | GTGCAC | 1 cut(s) | 225 |
| ApoI | RAATTY | 4 cut(s) | 162, 531, 1549, 1897 |
| AsiGI | ACCGGT | 1 cut(s) | 1342 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 816, 873, 1314, 1697 |
| AspLEI | GCGC | 4 cut(s) | 1486, 1502, 1767, 1943 |
| AspS9I | GGNCC | 6 cut(s) | 103, 793, 925, 1512, 1856, 1866 |
| AsuC2I | CCSGG | 1 cut(s) | 1516 |
| AsuHPI | GGTGA | 3 cut(s) | 139, 1620, 1794 |
| AsuII | TTCGAA | 1 cut(s) | 1781 |
| AvaII | GGWCC | 4 cut(s) | 103, 925, 1856, 1866 |
| AxyI | CCTNAGG | 2 cut(s) | 1136, 1705 |
| BaeGI | GKGCMC | 1 cut(s) | 229 |
| BamHI | GGATCC | 1 cut(s) | 662 |
| BanII | GRGCYC | 1 cut(s) | 114 |
| Bbv12I | GWGCWC | 3 cut(s) | 38, 114, 229 |
| BbvCI | CCTCAGC | 1 cut(s) | 328 |
| BccI | CCATC | 6 cut(s) | 300, 550, 762, 1106, 1262, 1867 |
| BceAI | ACGGC | 2 cut(s) | 207, 1743 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 816, 850 |
| BciT130I | CCWGG | 3 cut(s) | 1281, 1755, 1967 |
| BcnI | CCSGG | 1 cut(s) | 1516 |
| BcoDI | GTCTC | 4 cut(s) | 36, 170, 744, 1083 |
| BfaI | CTAG | 3 cut(s) | 585, 789, 1770 |
| BfmI | CTRYAG | 3 cut(s) | 66, 804, 1812 |
| BglII | AGATCT | 1 cut(s) | 948 |
| BmcAI | AGTACT | 1 cut(s) | 1450 |
| Bme1390I | CCNGG | 4 cut(s) | 1281, 1516, 1755, 1967 |
| Bme18I | GGWCC | 4 cut(s) | 103, 925, 1856, 1866 |
| BmgT120I | GGNCC | 6 cut(s) | 103, 793, 925, 1512, 1856, 1866 |
| BmiI | GGNNCC | 4 cut(s) | 664, 794, 1514, 2004 |
| BmrFI | CCNGG | 4 cut(s) | 1281, 1516, 1755, 1967 |
| BmsI | GCATC | 3 cut(s) | 1166, 1837, 1952 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 99, 131, 358, 390 |
| BpmI | CTGGAG | 2 cut(s) | 730, 885 |
| Bpu10I | CCTNAGC | 1 cut(s) | 328 |
| Bpu14I | TTCGAA | 1 cut(s) | 1781 |
| BpuEI | CTTGAG | 1 cut(s) | 194 |
| BpuMI | CCSGG | 1 cut(s) | 1516 |
| BsaI | GGTCTC | 2 cut(s) | 36, 744 |
| BsaJI | CCNNGG | 3 cut(s) | 1514, 1753, 1990 |
| BsaWI | WCCGGW | 3 cut(s) | 38, 893, 1342 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 922, 1108 |
| Bse118I | RCCGGY | 2 cut(s) | 927, 1342 |
| Bse1I | ACTGG | 1 cut(s) | 1350 |
| Bse21I | CCTNAGG | 2 cut(s) | 1136, 1705 |
| Bse3DI | GCAATG | 5 cut(s) | 637, 770, 1148, 1239, 1393 |
| BseBI | CCWGG | 3 cut(s) | 1281, 1755, 1967 |
| BseDI | CCNNGG | 3 cut(s) | 1514, 1753, 1990 |
| BseGI | GGATG | 3 cut(s) | 285, 311, 1117 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 922, 1108 |
| BseMI | GCAATG | 5 cut(s) | 637, 770, 1148, 1239, 1393 |
| BseMII | CTCAG | 3 cut(s) | 342, 1150, 1719 |
| BseNI | ACTGG | 1 cut(s) | 1350 |
| BseRI | GAGGAG | 5 cut(s) | 104, 603, 1678, 1933, 1995 |
| BseSI | GKGCMC | 1 cut(s) | 229 |
| BseYI | CCCAGC | 1 cut(s) | 1193 |
| BsgI | GTGCAG | 1 cut(s) | 1007 |
| Bsh1236I | CGCG | 4 cut(s) | 487, 1104, 1500, 1765 |
| BshFI | GGCC | 6 cut(s) | 795, 1011, 1147, 1513, 1622, 1758 |
| BshTI | ACCGGT | 1 cut(s) | 1342 |
| BsiHKAI | GWGCWC | 3 cut(s) | 38, 114, 229 |
| BsiSI | CCGG | 7 cut(s) | 39, 894, 928, 1012, 1343, 1516, 1854 |
| BslFI | GGGAC | 2 cut(s) | 200, 1736 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 922, 1108 |
| BsmAI | GTCTC | 4 cut(s) | 36, 170, 744, 1083 |
| BsmFI | GGGAC | 2 cut(s) | 200, 1736 |
| BsmI | GAATGC | 1 cut(s) | 448 |
| BsnI | GGCC | 6 cut(s) | 795, 1011, 1147, 1513, 1622, 1758 |
| Bso31I | GGTCTC | 2 cut(s) | 36, 744 |
| Bsp119I | TTCGAA | 1 cut(s) | 1781 |
| Bsp1286I | GDGCHC | 3 cut(s) | 38, 114, 229 |
| Bsp143I | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| BspACI | CCGC | 5 cut(s) | 118, 485, 569, 1102, 1686 |
| BspANI | GGCC | 6 cut(s) | 795, 1011, 1147, 1513, 1622, 1758 |
| BspCNI | CTCAG | 3 cut(s) | 341, 1149, 1718 |
| BspFNI | CGCG | 4 cut(s) | 487, 1104, 1500, 1765 |
| BspHI | TCATGA | 1 cut(s) | 250 |
| BspLI | GGNNCC | 4 cut(s) | 664, 794, 1514, 2004 |
| BspMAI | CTGCAG | 1 cut(s) | 808 |
| BspPI | GGATC | 3 cut(s) | 657, 670, 1526 |
| BspQI | GCTCTTC | 1 cut(s) | 822 |
| BspT104I | TTCGAA | 1 cut(s) | 1781 |
| BspTNI | GGTCTC | 2 cut(s) | 36, 744 |
| BsrDI | GCAATG | 5 cut(s) | 637, 770, 1148, 1239, 1393 |
| BsrFI | RCCGGY | 2 cut(s) | 927, 1342 |
| BsrI | ACTGG | 1 cut(s) | 1350 |
| BssAI | RCCGGY | 2 cut(s) | 927, 1342 |
| BssECI | CCNNGG | 3 cut(s) | 1514, 1753, 1990 |
| BssMI | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| BssNAI | GTATAC | 1 cut(s) | 1323 |
| BssT1I | CCWWGG | 1 cut(s) | 1990 |
| Bst1107I | GTATAC | 1 cut(s) | 1323 |
| Bst2UI | CCWGG | 3 cut(s) | 1281, 1755, 1967 |
| Bst4CI | ACNGT | 7 cut(s) | 27, 93, 181, 201, 420, 1226, 1750 |
| Bst6I | CTCTTC | 4 cut(s) | 381, 822, 1630, 1804 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 233 |
| BstBI | TTCGAA | 1 cut(s) | 1781 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 1731, 1976 |
| BstDEI | CTNAG | 6 cut(s) | 328, 432, 799, 1136, 1373, 1705 |
| BstF5I | GGATG | 3 cut(s) | 285, 311, 1117 |
| BstFNI | CGCG | 4 cut(s) | 487, 1104, 1500, 1765 |
| BstHHI | GCGC | 4 cut(s) | 1486, 1502, 1767, 1943 |
| BstKTI | GATC | 4 cut(s) | 606, 665, 951, 1521 |
| BstMAI | GTCTC | 4 cut(s) | 36, 170, 744, 1083 |
| BstMBI | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| BstNI | CCWGG | 3 cut(s) | 1281, 1755, 1967 |
| BstNSI | RCATGY | 3 cut(s) | 233, 680, 779 |
| BstSCI | CCNGG | 4 cut(s) | 1279, 1514, 1753, 1965 |
| BstSFI | CTRYAG | 3 cut(s) | 66, 804, 1812 |
| BstSLI | GKGCMC | 1 cut(s) | 229 |
| BstUI | CGCG | 4 cut(s) | 487, 1104, 1500, 1765 |
| BstX2I | RGATCY | 2 cut(s) | 662, 948 |
| BstYI | RGATCY | 2 cut(s) | 662, 948 |
| BstZ17I | GTATAC | 1 cut(s) | 1323 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1136, 1705 |
| BsuRI | GGCC | 6 cut(s) | 795, 1011, 1147, 1513, 1622, 1758 |
| BtgZI | GCGATG | 2 cut(s) | 1119, 1281 |
| BtsCI | GGATG | 3 cut(s) | 285, 311, 1117 |
| BtsIMutI | CAGTG | 4 cut(s) | 1231, 1305, 1357, 1422 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 1731, 1976 |
| CaiI | CAGNNNCTG | 3 cut(s) | 686, 943, 1469 |
| CciI | TCATGA | 1 cut(s) | 250 |
| CfoI | GCGC | 4 cut(s) | 1486, 1502, 1767, 1943 |
| Cfr10I | RCCGGY | 2 cut(s) | 927, 1342 |
| Cfr13I | GGNCC | 6 cut(s) | 103, 793, 925, 1512, 1856, 1866 |
| CseI | GACGC | 1 cut(s) | 774 |
| CsiI | ACCWGGT | 1 cut(s) | 1965 |
| Csp6I | GTAC | 2 cut(s) | 1340, 1449 |
| CspAI | ACCGGT | 1 cut(s) | 1342 |
| CviAII | CATG | 8 cut(s) | 230, 251, 575, 677, 776, 1117, 1478, 1718 |
| CviQI | GTAC | 2 cut(s) | 1340, 1449 |
| DdeI | CTNAG | 6 cut(s) | 328, 432, 799, 1136, 1373, 1705 |
| DpnI | GATC | 4 cut(s) | 605, 664, 950, 1520 |
| DpnII | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| DraI | TTTAAA | 1 cut(s) | 1294 |
| Eam1104I | CTCTTC | 4 cut(s) | 381, 822, 1630, 1804 |
| EarI | CTCTTC | 4 cut(s) | 381, 822, 1630, 1804 |
| Ecl136II | GAGCTC | 1 cut(s) | 112 |
| Eco130I | CCWWGG | 1 cut(s) | 1990 |
| Eco147I | AGGCCT | 1 cut(s) | 1622 |
| Eco24I | GRGCYC | 1 cut(s) | 114 |
| Eco31I | GGTCTC | 2 cut(s) | 36, 744 |
| Eco32I | GATATC | 1 cut(s) | 736 |
| Eco47I | GGWCC | 4 cut(s) | 103, 925, 1856, 1866 |
| Eco53kI | GAGCTC | 1 cut(s) | 112 |
| Eco57I | CTGAAG | 2 cut(s) | 965, 1446 |
| Eco81I | CCTNAGG | 2 cut(s) | 1136, 1705 |
| EcoICRI | GAGCTC | 1 cut(s) | 112 |
| EcoRI | GAATTC | 2 cut(s) | 162, 1549 |
| EcoRII | CCWGG | 3 cut(s) | 1279, 1753, 1965 |
| EcoRV | GATATC | 1 cut(s) | 736 |
| EcoT14I | CCWWGG | 1 cut(s) | 1990 |
| EcoT22I | ATGCAT | 1 cut(s) | 1838 |
| EcoT38I | GRGCYC | 1 cut(s) | 114 |
| ErhI | CCWWGG | 1 cut(s) | 1990 |
| FaeI | CATG | 8 cut(s) | 233, 254, 578, 680, 779, 1120, 1481, 1721 |
| FaqI | GGGAC | 2 cut(s) | 200, 1736 |
| FatI | CATG | 8 cut(s) | 229, 250, 574, 676, 775, 1116, 1477, 1717 |
| FblI | GTMKAC | 1 cut(s) | 1322 |
| FokI | GGATG | 3 cut(s) | 272, 318, 1124 |
| FriOI | GRGCYC | 1 cut(s) | 114 |
| FspBI | CTAG | 3 cut(s) | 585, 789, 1770 |
| GlaI | GCGC | 4 cut(s) | 1485, 1501, 1766, 1942 |
| GsaI | CCCAGC | 1 cut(s) | 1197 |
| GsuI | CTGGAG | 2 cut(s) | 730, 885 |
| HaeIII | GGCC | 6 cut(s) | 795, 1011, 1147, 1513, 1622, 1758 |
| HapII | CCGG | 7 cut(s) | 39, 894, 928, 1012, 1343, 1516, 1854 |
| HgaI | GACGC | 1 cut(s) | 774 |
| HhaI | GCGC | 4 cut(s) | 1486, 1502, 1767, 1943 |
| Hin1II | CATG | 8 cut(s) | 233, 254, 578, 680, 779, 1120, 1481, 1721 |
| Hin6I | GCGC | 4 cut(s) | 1484, 1500, 1765, 1941 |
| HinP1I | GCGC | 4 cut(s) | 1484, 1500, 1765, 1941 |
| HindIII | AAGCTT | 1 cut(s) | 1370 |
| HinfI | GANTC | 4 cut(s) | 260, 934, 1542, 1611 |
| HpaII | CCGG | 7 cut(s) | 39, 894, 928, 1012, 1343, 1516, 1854 |
| HphI | GGTGA | 3 cut(s) | 139, 1620, 1794 |
| Hpy166II | GTNNAC | 4 cut(s) | 227, 1048, 1323, 1474 |
| Hpy188I | TCNGA | 9 cut(s) | 107, 290, 625, 642, 1054, 1165, 1303, 1579, 1986 |
| Hpy188III | TCNNGA | 7 cut(s) | 251, 607, 747, 864, 943, 1214, 1546 |
| Hpy8I | GTNNAC | 4 cut(s) | 227, 1048, 1323, 1474 |
| Hpy99I | CGWCG | 1 cut(s) | 171 |
| HpyAV | CCTTC | 8 cut(s) | 262, 386, 604, 843, 922, 1001, 1161, 1470 |
| HpyCH4III | ACNGT | 7 cut(s) | 27, 93, 181, 201, 420, 1226, 1750 |
| HpyF3I | CTNAG | 6 cut(s) | 328, 432, 799, 1136, 1373, 1705 |
| Hsp92II | CATG | 8 cut(s) | 233, 254, 578, 680, 779, 1120, 1481, 1721 |
| HspAI | GCGC | 4 cut(s) | 1484, 1500, 1765, 1941 |
| Kzo9I | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| LguI | GCTCTTC | 1 cut(s) | 822 |
| LmnI | GCTCC | 5 cut(s) | 117, 613, 945, 1594, 2008 |
| LweI | GCATC | 3 cut(s) | 1166, 1837, 1952 |
| MabI | ACCWGGT | 1 cut(s) | 1965 |
| MaeI | CTAG | 3 cut(s) | 585, 789, 1770 |
| MaeIII | GTNAC | 2 cut(s) | 406, 1667 |
| MalI | GATC | 4 cut(s) | 605, 664, 950, 1520 |
| MboI | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| MfeI | CAATTG | 1 cut(s) | 1086 |
| MflI | RGATCY | 2 cut(s) | 662, 948 |
| MhlI | GDGCHC | 3 cut(s) | 38, 114, 229 |
| MluCI | AATT | 7 cut(s) | 162, 531, 1086, 1173, 1329, 1549, 1897 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MmeI | TCCRAC | 3 cut(s) | 492, 1326, 1706 |
| Mph1103I | ATGCAT | 1 cut(s) | 1838 |
| MroXI | GAANNNNTTC | 4 cut(s) | 816, 873, 1314, 1697 |
| MseI | TTAA | 6 cut(s) | 141, 561, 1253, 1293, 1712, 2026 |
| MslI | CAYNNNNRTG | 2 cut(s) | 255, 1955 |
| MspA1I | CMGCKG | 4 cut(s) | 80, 323, 332, 683 |
| MspI | CCGG | 7 cut(s) | 39, 894, 928, 1012, 1343, 1516, 1854 |
| MspR9I | CCNGG | 4 cut(s) | 1281, 1516, 1755, 1967 |
| MunI | CAATTG | 1 cut(s) | 1086 |
| Mva1269I | GAATGC | 1 cut(s) | 448 |
| MvaI | CCWGG | 3 cut(s) | 1281, 1755, 1967 |
| MvnI | CGCG | 4 cut(s) | 487, 1104, 1500, 1765 |
| NciI | CCSGG | 1 cut(s) | 1516 |
| NdeII | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| NlaIII | CATG | 8 cut(s) | 233, 254, 578, 680, 779, 1120, 1481, 1721 |
| NlaIV | GGNNCC | 4 cut(s) | 664, 794, 1514, 2004 |
| NsiI | ATGCAT | 1 cut(s) | 1838 |
| NspI | RCATGY | 3 cut(s) | 233, 680, 779 |
| NspV | TTCGAA | 1 cut(s) | 1781 |
| PagI | TCATGA | 1 cut(s) | 250 |
| PceI | AGGCCT | 1 cut(s) | 1622 |
| PciI | ACATGT | 1 cut(s) | 229 |
| PciSI | GCTCTTC | 1 cut(s) | 822 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 163 |
| PctI | GAATGC | 1 cut(s) | 448 |
| PdmI | GAANNNNTTC | 4 cut(s) | 816, 873, 1314, 1697 |
| PfeI | GAWTC | 3 cut(s) | 934, 1542, 1611 |
| PfoI | TCCNGGA | 1 cut(s) | 1279 |
| PinAI | ACCGGT | 1 cut(s) | 1342 |
| PleI | GAGTC | 1 cut(s) | 268 |
| PpsI | GAGTC | 1 cut(s) | 268 |
| PscI | ACATGT | 1 cut(s) | 229 |
| PsiI | TTATAA | 1 cut(s) | 546 |
| Psp124BI | GAGCTC | 1 cut(s) | 114 |
| Psp6I | CCWGG | 3 cut(s) | 1279, 1753, 1965 |
| PspFI | CCCAGC | 1 cut(s) | 1193 |
| PspGI | CCWGG | 3 cut(s) | 1279, 1753, 1965 |
| PspN4I | GGNNCC | 4 cut(s) | 664, 794, 1514, 2004 |
| PspPI | GGNCC | 6 cut(s) | 103, 793, 925, 1512, 1856, 1866 |
| PstI | CTGCAG | 1 cut(s) | 808 |
| PstNI | CAGNNNCTG | 3 cut(s) | 686, 943, 1469 |
| PsuI | RGATCY | 2 cut(s) | 662, 948 |
| PvuII | CAGCTG | 4 cut(s) | 80, 323, 332, 683 |
| RsaI | GTAC | 2 cut(s) | 1341, 1450 |
| RsaNI | GTAC | 2 cut(s) | 1340, 1449 |
| RseI | CAYNNNNRTG | 2 cut(s) | 255, 1955 |
| SacI | GAGCTC | 1 cut(s) | 114 |
| SapI | GCTCTTC | 1 cut(s) | 822 |
| SaqAI | TTAA | 6 cut(s) | 141, 561, 1253, 1293, 1712, 2026 |
| Sau3AI | GATC | 4 cut(s) | 603, 662, 948, 1518 |
| Sau96I | GGNCC | 6 cut(s) | 103, 793, 925, 1512, 1856, 1866 |
| ScaI | AGTACT | 1 cut(s) | 1450 |
| SchI | GAGTC | 1 cut(s) | 269 |
| ScrFI | CCNGG | 4 cut(s) | 1281, 1516, 1755, 1967 |
| SduI | GDGCHC | 3 cut(s) | 38, 114, 229 |
| SexAI | ACCWGGT | 1 cut(s) | 1965 |
| SfaNI | GCATC | 3 cut(s) | 1166, 1837, 1952 |
| SfcI | CTRYAG | 3 cut(s) | 66, 804, 1812 |
| SfuI | TTCGAA | 1 cut(s) | 1781 |
| SinI | GGWCC | 4 cut(s) | 103, 925, 1856, 1866 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 255, 1955 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| Sse9I | AATT | 7 cut(s) | 162, 531, 1086, 1173, 1329, 1549, 1897 |
| SseBI | AGGCCT | 1 cut(s) | 1622 |
| SsiI | CCGC | 5 cut(s) | 118, 485, 569, 1102, 1686 |
| SspMI | CTAG | 3 cut(s) | 585, 789, 1770 |
| SstI | GAGCTC | 1 cut(s) | 114 |
| StuI | AGGCCT | 1 cut(s) | 1622 |
| StyD4I | CCNGG | 4 cut(s) | 1279, 1514, 1753, 1965 |
| StyI | CCWWGG | 1 cut(s) | 1990 |
| TaaI | ACNGT | 7 cut(s) | 27, 93, 181, 201, 420, 1226, 1750 |
| TaqI | TCGA | 1 cut(s) | 1781 |
| TasI | AATT | 7 cut(s) | 162, 531, 1086, 1173, 1329, 1549, 1897 |
| TatI | WGTACW | 1 cut(s) | 1448 |
| TauI | GCSGC | 1 cut(s) | 487 |
| TfiI | GAWTC | 3 cut(s) | 934, 1542, 1611 |
| Tru1I | TTAA | 6 cut(s) | 141, 561, 1253, 1293, 1712, 2026 |
| Tru9I | TTAA | 6 cut(s) | 141, 561, 1253, 1293, 1712, 2026 |
| TscAI | CASTG | 4 cut(s) | 1231, 1312, 1357, 1429 |
| TspDTI | ATGAA | 5 cut(s) | 207, 239, 267, 563, 1443 |
| TspGWI | ACGGA | 2 cut(s) | 905, 1415 |
| TspRI | CASTG | 4 cut(s) | 1231, 1312, 1357, 1429 |
| VneI | GTGCAC | 1 cut(s) | 225 |
| VpaK11BI | GGWCC | 4 cut(s) | 103, 925, 1856, 1866 |
| XapI | RAATTY | 4 cut(s) | 162, 531, 1549, 1897 |
| XceI | RCATGY | 3 cut(s) | 233, 680, 779 |
| XmiI | GTMKAC | 1 cut(s) | 1322 |
| XmnI | GAANNNNTTC | 4 cut(s) | 816, 873, 1314, 1697 |
| XspI | CTAG | 3 cut(s) | 585, 789, 1770 |
| ZrmI | AGTACT | 1 cut(s) | 1450 |
| Zsp2I | ATGCAT | 1 cut(s) | 1838 |