Rw4G026570

Ankyrin repeats (3 copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0002201
Physical Location & Seq
Reverse (-)
52781820 .. 52785265
3446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G026570.1

Sequence Viewer

Length: 2001 bp
ATGCCGCCGTCATACTTCCCTCTCCGGTGGGAAAGCACCGGAGACCAGTGGTGGTACGCGTCACCTATTGATTGGGCAGCAGCCAATGGCCTTTACGACCTTGTCAGCGAGCTTCTTCACCTCGACACCAACCTCCTCATCAAGCTGACATCGCTCCGCCGCATCCGCCGCCTCGAAACCGTGTGGGACGACGAGGCTCACTTCAATGGCGTGGCGAAATGCCGCTCTCAAGTTGCCAAGAGGCTTCTCAATGAGTGCCAGACACAGAGTGGCCACAACTCTCTGATCCGGGCCGGCTACGGCGGCTGGCTCCTCTACACCGCCGCCTCAGCCGGTGACGTGGCCTTTGTTAAGGAGTTGTTAGCAAGAGACCCTCTTTTGGTGTTTGGGGAAGGAGAGTATGGGGTGACTGATATCTTCTATGCTGCTGCTAGGAGTAAGAATGCTGAGGTTTTCAGGCTGCTGCTAGATTTTTCCGTGTCGCCGAGGTTTGGTGAGGAGAATGGGGAGCTGGAGGAGAGGATAGTGGATAGTAGGTCGGATTTTAAGTGGGAGATGATGAACCGGGCGGTTCATGCGGCTGCGAGAGGTGGGAATCTGGAGGTTTTGAAGGAGTTGGTGGTTGGGGATTGTGGTGATGTTTTGGTTTATAGGGATGCTCAGGGCTCTACTGTCTTGCATACTGCCTCTGGTAGAGGGCAGATTGAGGTGGTTAAATATCTAATAGCATCCTTTGATATCAGCACATTTGTAGATAGTCAAGGGAATACAGCTTTACATGTTGCCGCTTACAGGGGTCACTTAGCTGTGGTGGAAGTGCTAATTGGTGCATCTCCCTCATTAGTCTCTTTATCGAACTACTATGGAGATACATTTCTACACATGGCAGTGGCTGGTTTCCGAGCTCCTGGTTTCCGGAGAGTGGACAAACAGATTGAGCTCATCAAGCAATTAGTATGTGGTGATATTGTGAACATGCAGGACATCGTTAATGATAGGAACAACAATGGAAGAACAGCTCTTCACATAGCTGTTAGTGAGAACATACAGTCTAGTGTGGTGGAACTCCTCATGACTGTTCCGTCAATCGATCTGAACATTCGTGATGGTGATGGCATGACCCCATTGGATATTCTTAAGCAAAGGCCAAAGTCACCATCTTCTGAACTTTTGATCAAGCAGTTGATTTCAGCTGGAGGAATCTCCAAGTGTCAAGATCATAAAGCGAGAAATGCCCTTGTTTCTCATTTGAGAATGCATGGTATTGGGAGCAGTCCTGGAACCTCTTTCCGAATCCCTGATGCAGAGATATTCTTATACACGGGCAATGATAATGCTTCCGATGCCAGTGGTGATCAGTCATGTCTACAATTCAGTAGGTGCTCGGGTGAAATAAGTCAGGTTGATTCACCCAACTCAGTGAGCAATAAGAAGACTGGTTCTGTAAATTATGCTGCAAGGAGCCTTAAGTTTCTTCTTCAATGGCCGAGGAGGAAAGTGAAAAAGGAATCTAGCAGAGACTTGGGAGATGCTGATTCCTTGGACTCGTATAGTCCATCTACAGATTTGGAAGACAGTCCAATCCCACTTCGGCAGATGTATTTGAAATCTTCATCCCTTCCCAACAGCAAAAGGATACTTTCTGCCAGGACTTATCTTCCAAGCCCCTACACTAAAATGAGATATACTGCTGGTCTAACACATGGTGTGATTCAAGCAGTGCCTCAGTTTGCTTTTCCAGCTCAATCACATGCAAGTCCTCTGTCACGATCATCCATGTCTTCAACTTCCTTCGTGGAGAAGGAGAAGGGTGTTGACAATGTAGGATCATCTCGCTCAAATGGGAAAGTATCAGTAGGGAATTCCAGACAAAGTTCCTTCAATAGGAAGTTAATAAACCAATATTTGTGTGTTGGCGCACAAGGCGTGGAGGCTGAAGAATCAATTAGCTCTACATGGCCAACTCGGAGCTACAAACATTCCAGTTCTTTAGTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5

Protein Analysis

666

Amino Acids

73.14

Weight (kDa)

7.63

Isoelectric Point (pI)

51.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 189 - 247 1.6e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 192 - 278 6.6e-16 Ankyrin repeats (3 copies)
Ank_4 PF13637 226 - 275 1.2e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 252 - 297 8.9e-06 Ankyrin repeats (3 copies)
Ank PF00023 254 - 281 1.6e-06 Ankyrin repeat
Ank_2 PF12796 311 - 377 7.8e-06 Ankyrin repeats (3 copies)
Ank_5 PF13857 330 - 378 5e-07 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1081
AccBSI CCGCTC 1 cut(s) 225
AccI GTMKAC 1 cut(s) 1366
AccII CGCG 1 cut(s) 59
AccIII TCCGGA 1 cut(s) 915
AclWI GGATC 2 cut(s) 280, 1834
AcoI YGGCCR 3 cut(s) 271, 1484, 1958
AcsI RAATTY 1 cut(s) 1861
AcuI CTGAAG 1 cut(s) 1956
AdeI CACNNNGTG 2 cut(s) 269, 1706
AfaI GTAC 1 cut(s) 56
AfiI CCNNNNNNNGG 5 cut(s) 379, 491, 792, 922, 1884
AflII CTTAAG 2 cut(s) 1136, 1466
AflIII ACRYGT 2 cut(s) 57, 778
AgsI TTSAA 7 cut(s) 205, 610, 1481, 1606, 1715, 1785, 1882
AjiI CACGTC 1 cut(s) 340
AjnI CCWGG 3 cut(s) 907, 1276, 1646
AjuI GAANNNNNNNTTGG 2 cut(s) 807, 839
Alw21I GWGCWC 3 cut(s) 907, 942, 1385
Alw26I GTCTC 4 cut(s) 36, 363, 850, 1512
AlwI GGATC 2 cut(s) 280, 1834
AlwNI CAGNNNCTG 1 cut(s) 893
Ama87I CYCGRG 1 cut(s) 1384
Aor13HI TCCGGA 1 cut(s) 915
AoxI GGCC 7 cut(s) 88, 271, 291, 342, 1145, 1484, 1958
ApeKI GCWGC 8 cut(s) 77, 80, 425, 428, 460, 463, 581, 1454
ApoI RAATTY 1 cut(s) 1861
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
AspLEI GCGC 1 cut(s) 1919
AspS9I GGNCC 1 cut(s) 291
AsuC2I CCSGG 2 cut(s) 290, 566
AvaI CYCGRG 1 cut(s) 1384
BalI TGGCCA 2 cut(s) 273, 1960
BanII GRGCYC 3 cut(s) 668, 907, 942
BbsI GAAGAC 3 cut(s) 1439, 1578, 1773
Bbv12I GWGCWC 3 cut(s) 907, 942, 1385
BbvCI CCTCAGC 2 cut(s) 328, 447
BbvI GCAGC 8 cut(s) 89, 92, 412, 415, 447, 450, 568, 1441
BccI CCATC 4 cut(s) 1100, 1106, 1165, 1564
BceAI ACGGC 1 cut(s) 316
BciT130I CCWGG 3 cut(s) 909, 1278, 1648
BciVI GTATCC 1 cut(s) 1629
BclI TGATCA 2 cut(s) 1173, 1354
BcnI CCSGG 2 cut(s) 290, 566
BcoDI GTCTC 4 cut(s) 36, 363, 850, 1512
BfaI CTAG 4 cut(s) 432, 467, 1053, 1512
BfmI CTRYAG 1 cut(s) 1560
BfrI CTTAAG 2 cut(s) 1136, 1466
BfuI GTATCC 1 cut(s) 1629
Bme1390I CCNGG 5 cut(s) 290, 566, 909, 1278, 1648
BmeT110I CYCGRG 1 cut(s) 1384
BmgBI CACGTC 1 cut(s) 340
BmgT120I GGNCC 1 cut(s) 291
BmiI GGNNCC 3 cut(s) 311, 1282, 1463
BmrFI CCNGG 5 cut(s) 290, 566, 909, 1278, 1648
BmsI GCATC 7 cut(s) 171, 646, 737, 839, 1291, 1333, 1519
BpiI GAAGAC 3 cut(s) 1439, 1578, 1773
BpmI CTGGAG 3 cut(s) 533, 620, 1215
Bpu10I CCTNAGC 3 cut(s) 328, 447, 660
BpuEI CTTGAG 1 cut(s) 213
BpuMI CCSGG 2 cut(s) 290, 566
Bsa29I ATCGAT 1 cut(s) 1089
BsaI GGTCTC 2 cut(s) 36, 363
BsaJI CCNNGG 3 cut(s) 485, 1487, 1539
BsaWI WCCGGW 3 cut(s) 24, 38, 915
Bsc4I CCNNNNNNNGG 5 cut(s) 379, 491, 792, 922, 1884
Bse118I RCCGGY 2 cut(s) 293, 332
Bse1I ACTGG 4 cut(s) 46, 1347, 1441, 1983
Bse3DI GCAATG 1 cut(s) 1333
BseAI TCCGGA 1 cut(s) 915
BseBI CCWGG 3 cut(s) 909, 1278, 1648
BseCI ATCGAT 1 cut(s) 1089
BseDI CCNNGG 3 cut(s) 485, 1487, 1539
BseGI GGATG 5 cut(s) 162, 661, 728, 1613, 1772
BseLI CCNNNNNNNGG 5 cut(s) 379, 491, 792, 922, 1884
BseMI GCAATG 1 cut(s) 1333
BseMII CTCAG 5 cut(s) 342, 438, 674, 1431, 1739
BseNI ACTGG 4 cut(s) 46, 1347, 1441, 1983
BseRI GAGGAG 6 cut(s) 125, 302, 512, 530, 1058, 1504
BseXI GCAGC 8 cut(s) 89, 92, 412, 415, 447, 450, 568, 1441
Bsh1236I CGCG 1 cut(s) 59
BshFI GGCC 7 cut(s) 90, 273, 293, 344, 1147, 1486, 1960
BshVI ATCGAT 1 cut(s) 1089
BsiHKAI GWGCWC 3 cut(s) 907, 942, 1385
BsiHKCI CYCGRG 1 cut(s) 1384
BsiSI CCGG 7 cut(s) 25, 39, 289, 294, 333, 565, 916
BslFI GGGAC 1 cut(s) 200
BslI CCNNNNNNNGG 5 cut(s) 379, 491, 792, 922, 1884
BsmAI GTCTC 4 cut(s) 36, 363, 850, 1512
BsmFI GGGAC 1 cut(s) 200
BsmI GAATGC 2 cut(s) 448, 1260
BsnI GGCC 7 cut(s) 90, 273, 293, 344, 1147, 1486, 1960
Bso31I GGTCTC 2 cut(s) 36, 363
BsoBI CYCGRG 1 cut(s) 1384
Bsp1286I GDGCHC 4 cut(s) 668, 907, 942, 1385
Bsp13I TCCGGA 1 cut(s) 915
Bsp143I GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
BspANI GGCC 7 cut(s) 90, 273, 293, 344, 1147, 1486, 1960
BspCNI CTCAG 5 cut(s) 341, 439, 673, 1430, 1738
BspDI ATCGAT 1 cut(s) 1089
BspEI TCCGGA 1 cut(s) 915
BspFNI CGCG 1 cut(s) 59
BspHI TCATGA 1 cut(s) 1071
BspLI GGNNCC 3 cut(s) 311, 1282, 1463
BspPI GGATC 2 cut(s) 280, 1834
BspQI GCTCTTC 1 cut(s) 1026
BspTI CTTAAG 2 cut(s) 1136, 1466
BspTNI GGTCTC 2 cut(s) 36, 363
BsrBI CCGCTC 1 cut(s) 225
BsrDI GCAATG 1 cut(s) 1333
BsrFI RCCGGY 2 cut(s) 293, 332
BsrI ACTGG 4 cut(s) 46, 1347, 1441, 1983
BssAI RCCGGY 2 cut(s) 293, 332
BssECI CCNNGG 3 cut(s) 485, 1487, 1539
BssMI GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
BssT1I CCWWGG 1 cut(s) 1539
Bst2UI CCWGG 3 cut(s) 909, 1278, 1648
Bst4CI ACNGT 5 cut(s) 181, 673, 1050, 1078, 1577
Bst6I CTCTTC 1 cut(s) 1026
BstAFI CTTAAG 2 cut(s) 1136, 1466
BstC8I GCNNGC 3 cut(s) 110, 295, 308
BstDEI CTNAG 6 cut(s) 328, 447, 660, 802, 1417, 1725
BstENI CCTNNNNNAGG 1 cut(s) 1882
BstF5I GGATG 5 cut(s) 162, 661, 728, 1613, 1772
BstFNI CGCG 1 cut(s) 59
BstHHI GCGC 1 cut(s) 1919
BstKTI GATC 7 cut(s) 288, 1093, 1176, 1219, 1357, 1772, 1829
BstMAI GTCTC 4 cut(s) 36, 363, 850, 1512
BstMBI GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
BstNI CCWGG 3 cut(s) 909, 1278, 1648
BstNSI RCATGY 3 cut(s) 782, 979, 1754
BstSCI CCNGG 5 cut(s) 288, 564, 907, 1276, 1646
BstSFI CTRYAG 1 cut(s) 1560
BstUI CGCG 1 cut(s) 59
BstV1I GCAGC 8 cut(s) 89, 92, 412, 415, 447, 450, 568, 1441
BstV2I GAAGAC 3 cut(s) 1439, 1578, 1773
Bsu15I ATCGAT 1 cut(s) 1089
BsuI GTATCC 1 cut(s) 1629
BsuRI GGCC 7 cut(s) 90, 273, 293, 344, 1147, 1486, 1960
BsuTUI ATCGAT 1 cut(s) 1089
BtgZI GCGATG 1 cut(s) 135
BtrI CACGTC 1 cut(s) 340
BtsCI GGATG 5 cut(s) 162, 661, 728, 1613, 1772
BtsI GCAGTG 2 cut(s) 894, 1725
BtsIMutI CAGTG 5 cut(s) 53, 894, 1354, 1425, 1725
Cac8I GCNNGC 3 cut(s) 110, 295, 308
CaiI CAGNNNCTG 1 cut(s) 893
CciI TCATGA 1 cut(s) 1071
CfoI GCGC 1 cut(s) 1919
Cfr10I RCCGGY 2 cut(s) 293, 332
Cfr13I GGNCC 1 cut(s) 291
ClaI ATCGAT 1 cut(s) 1089
CseI GACGC 1 cut(s) 48
Csp6I GTAC 1 cut(s) 55
CviQI GTAC 1 cut(s) 55
DdeI CTNAG 6 cut(s) 328, 447, 660, 802, 1417, 1725
DpnI GATC 7 cut(s) 287, 1092, 1175, 1218, 1356, 1771, 1828
DpnII GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
DraIII CACNNNGTG 2 cut(s) 269, 1706
DrdI GACNNNNNNGTC 1 cut(s) 1081
DseDI GACNNNNNNGTC 1 cut(s) 1081
EaeI YGGCCR 3 cut(s) 271, 1484, 1958
Eam1104I CTCTTC 1 cut(s) 1026
EarI CTCTTC 1 cut(s) 1026
EciI GGCGGA 2 cut(s) 146, 155
Ecl136II GAGCTC 2 cut(s) 905, 940
Eco130I CCWWGG 1 cut(s) 1539
Eco24I GRGCYC 3 cut(s) 668, 907, 942
Eco31I GGTCTC 2 cut(s) 36, 363
Eco32I GATATC 2 cut(s) 415, 739
Eco53kI GAGCTC 2 cut(s) 905, 940
Eco57I CTGAAG 1 cut(s) 1956
Eco88I CYCGRG 1 cut(s) 1384
EcoICRI GAGCTC 2 cut(s) 905, 940
EcoNI CCTNNNNNAGG 1 cut(s) 1882
EcoRI GAATTC 1 cut(s) 1861
EcoRII CCWGG 3 cut(s) 907, 1276, 1646
EcoRV GATATC 2 cut(s) 415, 739
EcoT14I CCWWGG 1 cut(s) 1539
EcoT22I ATGCAT 1 cut(s) 1260
EcoT38I GRGCYC 3 cut(s) 668, 907, 942
ErhI CCWWGG 1 cut(s) 1539
FaqI GGGAC 1 cut(s) 200
FbaI TGATCA 2 cut(s) 1173, 1354
FblI GTMKAC 1 cut(s) 1366
FokI GGATG 5 cut(s) 149, 668, 715, 1600, 1759
FriOI GRGCYC 3 cut(s) 668, 907, 942
FspBI CTAG 4 cut(s) 432, 467, 1053, 1512
GlaI GCGC 1 cut(s) 1918
GsuI CTGGAG 3 cut(s) 533, 620, 1215
HaeIII GGCC 7 cut(s) 90, 273, 293, 344, 1147, 1486, 1960
HapII CCGG 7 cut(s) 25, 39, 289, 294, 333, 565, 916
HgaI GACGC 1 cut(s) 48
HhaI GCGC 1 cut(s) 1919
Hin6I GCGC 1 cut(s) 1917
HinP1I GCGC 1 cut(s) 1917
HincII GTYRAC 1 cut(s) 1816
HindII GTYRAC 1 cut(s) 1816
HinfI GANTC 9 cut(s) 595, 1200, 1293, 1406, 1508, 1535, 1544, 1711, 1940
HpaII CCGG 7 cut(s) 25, 39, 289, 294, 333, 565, 916
Hpy166II GTNNAC 4 cut(s) 925, 973, 1367, 1816
Hpy188I TCNGA 8 cut(s) 285, 541, 902, 1095, 1165, 1292, 1342, 1968
Hpy188III TCNNGA 7 cut(s) 599, 916, 1072, 1103, 1214, 1767, 1866
Hpy8I GTNNAC 4 cut(s) 925, 973, 1367, 1816
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 7 cut(s) 386, 604, 1628, 1795, 1801, 1801, 1888
HpyCH4III ACNGT 5 cut(s) 181, 673, 1050, 1078, 1577
HpyCH4IV ACGT 1 cut(s) 339
HpyCH4V TGCA 7 cut(s) 679, 830, 979, 1258, 1304, 1457, 1754
HpyF3I CTNAG 6 cut(s) 328, 447, 660, 802, 1417, 1725
HpySE526I ACGT 1 cut(s) 339
HspAI GCGC 1 cut(s) 1917
Kpn2I TCCGGA 1 cut(s) 915
KroI GCCGGC 1 cut(s) 293
KroNI GCCGGC 1 cut(s) 295
Ksp22I TGATCA 2 cut(s) 1173, 1354
Kzo9I GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
LguI GCTCTTC 1 cut(s) 1026
LmnI GCTCC 7 cut(s) 159, 315, 508, 910, 1269, 1461, 1968
Lsp1109I GCAGC 8 cut(s) 89, 92, 412, 415, 447, 450, 568, 1441
LweI GCATC 7 cut(s) 171, 646, 737, 839, 1291, 1333, 1519
MaeI CTAG 4 cut(s) 432, 467, 1053, 1512
MaeII ACGT 1 cut(s) 339
MaeIII GTNAC 6 cut(s) 60, 335, 406, 797, 1152, 1764
MalI GATC 7 cut(s) 287, 1092, 1175, 1218, 1356, 1771, 1828
MbiI CCGCTC 1 cut(s) 225
MboI GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
MhlI GDGCHC 4 cut(s) 668, 907, 942, 1385
MlsI TGGCCA 2 cut(s) 273, 1960
MluCI AATT 6 cut(s) 822, 950, 1370, 1447, 1861, 1944
MluI ACGCGT 1 cut(s) 57
MluNI TGGCCA 2 cut(s) 273, 1960
MlyI GAGTC 1 cut(s) 1538
MmeI TCCRAC 1 cut(s) 519
Mox20I TGGCCA 2 cut(s) 273, 1960
Mph1103I ATGCAT 1 cut(s) 1260
MroI TCCGGA 1 cut(s) 915
MroNI GCCGGC 1 cut(s) 293
MscI TGGCCA 2 cut(s) 273, 1960
MseI TTAA 7 cut(s) 351, 546, 714, 990, 1137, 1467, 1892
MslI CAYNNNNRTG 3 cut(s) 204, 887, 1676
Msp20I TGGCCA 2 cut(s) 273, 1960
MspA1I CMGCKG 1 cut(s) 1193
MspCI CTTAAG 2 cut(s) 1136, 1466
MspI CCGG 7 cut(s) 25, 39, 289, 294, 333, 565, 916
MspR9I CCNGG 5 cut(s) 290, 566, 909, 1278, 1648
Mva1269I GAATGC 2 cut(s) 448, 1260
MvaI CCWGG 3 cut(s) 909, 1278, 1648
MvnI CGCG 1 cut(s) 59
NaeI GCCGGC 1 cut(s) 295
NciI CCSGG 2 cut(s) 290, 566
NdeII GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
NgoMIV GCCGGC 1 cut(s) 293
NlaIV GGNNCC 3 cut(s) 311, 1282, 1463
NmeAIII GCCGAG 2 cut(s) 510, 1512
NmuCI GTSAC 6 cut(s) 60, 335, 406, 797, 1152, 1764
NsiI ATGCAT 1 cut(s) 1260
NspI RCATGY 3 cut(s) 782, 979, 1754
PagI TCATGA 1 cut(s) 1071
PciI ACATGT 1 cut(s) 778
PciSI GCTCTTC 1 cut(s) 1026
PctI GAATGC 2 cut(s) 448, 1260
PdiI GCCGGC 1 cut(s) 295
PfeI GAWTC 8 cut(s) 595, 1200, 1293, 1406, 1508, 1535, 1711, 1940
PflFI GACNNNGTC 1 cut(s) 101
PfoI TCCNGGA 1 cut(s) 1276
PleI GAGTC 1 cut(s) 1538
PpsI GAGTC 1 cut(s) 1538
PscI ACATGT 1 cut(s) 778
Psp124BI GAGCTC 2 cut(s) 907, 942
Psp6I CCWGG 3 cut(s) 907, 1276, 1646
PspGI CCWGG 3 cut(s) 907, 1276, 1646
PspN4I GGNNCC 3 cut(s) 311, 1282, 1463
PspPI GGNCC 1 cut(s) 291
PstNI CAGNNNCTG 1 cut(s) 893
PsyI GACNNNGTC 1 cut(s) 101
PvuII CAGCTG 1 cut(s) 1193
RsaI GTAC 1 cut(s) 56
RsaNI GTAC 1 cut(s) 55
RseI CAYNNNNRTG 3 cut(s) 204, 887, 1676
SacI GAGCTC 2 cut(s) 907, 942
SapI GCTCTTC 1 cut(s) 1026
SaqAI TTAA 7 cut(s) 351, 546, 714, 990, 1137, 1467, 1892
Sau3AI GATC 7 cut(s) 285, 1090, 1173, 1216, 1354, 1769, 1826
Sau96I GGNCC 1 cut(s) 291
SchI GAGTC 1 cut(s) 1538
ScrFI CCNGG 5 cut(s) 290, 566, 909, 1278, 1648
SduI GDGCHC 4 cut(s) 668, 907, 942, 1385
SfaNI GCATC 7 cut(s) 171, 646, 737, 839, 1291, 1333, 1519
SfcI CTRYAG 1 cut(s) 1560
SmiMI CAYNNNNRTG 3 cut(s) 204, 887, 1676
SmlI CTYRAG 3 cut(s) 228, 1136, 1466
SmoI CTYRAG 3 cut(s) 228, 1136, 1466
Sse9I AATT 6 cut(s) 822, 950, 1370, 1447, 1861, 1944
SspI AATATT 1 cut(s) 1904
SspMI CTAG 4 cut(s) 432, 467, 1053, 1512
SstI GAGCTC 2 cut(s) 907, 942
StyD4I CCNGG 5 cut(s) 288, 564, 907, 1276, 1646
StyI CCWWGG 1 cut(s) 1539
TaaI ACNGT 5 cut(s) 181, 673, 1050, 1078, 1577
TaiI ACGT 1 cut(s) 342
TaqI TCGA 4 cut(s) 123, 174, 854, 1089
TasI AATT 6 cut(s) 822, 950, 1370, 1447, 1861, 1944
TauI GCSGC 8 cut(s) 7, 162, 171, 225, 306, 326, 581, 788
TfiI GAWTC 8 cut(s) 595, 1200, 1293, 1406, 1508, 1535, 1711, 1940
Tru1I TTAA 7 cut(s) 351, 546, 714, 990, 1137, 1467, 1892
Tru9I TTAA 7 cut(s) 351, 546, 714, 990, 1137, 1467, 1892
TscAI CASTG 5 cut(s) 53, 894, 1354, 1425, 1725
TseFI GTSAC 6 cut(s) 60, 335, 406, 797, 1152, 1764
TseI GCWGC 8 cut(s) 77, 80, 425, 428, 460, 463, 581, 1454
Tsp45I GTSAC 6 cut(s) 60, 335, 406, 797, 1152, 1764
TspDTI ATGAA 3 cut(s) 563, 575, 1602
TspGWI ACGGA 2 cut(s) 466, 1071
TspRI CASTG 5 cut(s) 53, 894, 1354, 1425, 1725
Tth111I GACNNNGTC 1 cut(s) 101
Vha464I CTTAAG 2 cut(s) 1136, 1466
XagI CCTNNNNNAGG 1 cut(s) 1882
XapI RAATTY 1 cut(s) 1861
XceI RCATGY 3 cut(s) 782, 979, 1754
XcmI CCANNNNNNNNNTGG 1 cut(s) 266
XmiI GTMKAC 1 cut(s) 1366
XspI CTAG 4 cut(s) 432, 467, 1053, 1512
Zsp2I ATGCAT 1 cut(s) 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.