FvH4_7g26290

Quinone oxidoreductase-like protein 2 homolog

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
19907367 .. 19910882
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26290.t1

Sequence Viewer

Length: 1041 bp
ATGGAGGCTCTGGTGTGCAAGAAACTGGGTGACCCAACGGCGGAGAATTCAGAGGAGAAAGCGATAGTGATCGAGAAGAGCTATCCGATACCGGAACTGGAGACTCCGACGTCGGTGAGAGTGAGAGTCAAAGCTACGAGCTTGAACTACGCCAACTACCTTCAGATACTCGGCAAGTACCAGGAGAAGCCGCCGCTGCCTTTCATCCCCGGCTCCGATTACTCCGGCGTCGTCGACGCCGTCGGCTCCGCCGTGACCAAGTTCAGACCCGGCGACAGGGTTTGCTCCTTCGCGCCGCTCGGGTCGTTTGCTCAGTTCATCGTCGCCGATCAGTCTCTTCTGTTTGGAGTGCCGGAGGGGTGTGATCTGGTGGCGGCCGGTGCGTTGCCGGTTGCGTTTGGGACGTCTCATGTGGCTCTGCTTCACCGGGCCAATTTGAGCTCCGGTCAAGTGTTGTTGGTGCTTGGTGCGGCGGGAGGTGTTGGACTTGCGGCGGTACAGATTGGGAAGGTTGTTGGAGCCGTTGTCATTGCGGTAGCCAGGGGAGCTGAGAAGGTGGAGTATTTGAAGTCGTTGGGGGTTGATCATGTGGTGGACTCCAGCAGTCAGAGTATTATCCAAAGTGTGAAGGATTTCTTGAAAACCAGGAAGCTTAAAGGGGTGGATGTTTTGTATGATCCGGTTGGAGGGAAGCTTACTAAAGAGGCAATGAAGGTTTTGAATTGGGGAGCACACATTTTGGTTATTGGCTTTGCCAGTGGAGAGGTCCCTGTCATTCCTGCCAATATTGCTCTTGTTAAGAACTGGACAGTGCATGGGCTGTACTGGGGTAGCTACAGAATACATCGACCCGCTGTTCTTGAAGATTCAGTTAATGAATTACTTTCTTGGGTGGCGCGAGGCTTGATCACCATCCGCATTTCTCATACGTACCGCCTGCCAGAGGCCAATCTTGCCTTTTCTGCCATCAAAGATAGGAAAGTCATTGGGAAAGTGATGATTGTTCTTGACGACCCAAGCAGTGTAAGGTCAAAGCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

347

Amino Acids

36.96

Weight (kDa)

9.06

Isoelectric Point (pI)

24.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 36 - 118 3e-14 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 160 - 280 4.5e-23 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 192 - 333 2.6e-14 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 109
AatII GACGTC 2 cut(s) 113, 407
AccBSI CCGCTC 1 cut(s) 298
AccI GTMKAC 1 cut(s) 234
AccII CGCG 2 cut(s) 293, 898
AclWI GGATC 1 cut(s) 671
AcoI YGGCCR 1 cut(s) 375
AcsI RAATTY 1 cut(s) 46
AcuI CTGAAG 1 cut(s) 146
AcyI GRCGYC 4 cut(s) 110, 228, 237, 404
AfaI GTAC 4 cut(s) 179, 498, 824, 932
AfiI CCNNNNNNNGG 4 cut(s) 40, 276, 686, 943
AgsI TTSAA 5 cut(s) 145, 568, 640, 721, 863
AjnI CCWGG 3 cut(s) 180, 539, 644
AluBI AGCT 9 cut(s) 81, 134, 141, 441, 548, 652, 694, 834, 1036
AluI AGCT 9 cut(s) 81, 134, 141, 441, 548, 652, 694, 834, 1036
Alw21I GWGCWC 2 cut(s) 443, 733
Alw26I GTCTC 3 cut(s) 95, 339, 411
AlwI GGATC 1 cut(s) 671
Ama87I CYCGRG 1 cut(s) 299
AoxI GGCC 3 cut(s) 375, 429, 945
ApeKI GCWGC 1 cut(s) 196
ApoI RAATTY 1 cut(s) 46
Asp700I GAANNNNTTC 1 cut(s) 632
AspLEI GCGC 2 cut(s) 295, 898
AspS9I GGNCC 2 cut(s) 429, 766
AsuC2I CCSGG 3 cut(s) 210, 270, 428
AsuHPI GGTGA 4 cut(s) 41, 127, 416, 901
AvaI CYCGRG 1 cut(s) 299
AvaII GGWCC 1 cut(s) 766
BanII GRGCYC 1 cut(s) 443
Bbv12I GWGCWC 2 cut(s) 443, 733
BbvI GCAGC 1 cut(s) 183
BccI CCATC 2 cut(s) 920, 974
BceAI ACGGC 4 cut(s) 54, 224, 236, 506
BciT130I CCWGG 3 cut(s) 182, 541, 646
BclI TGATCA 2 cut(s) 583, 906
BcnI CCSGG 3 cut(s) 210, 270, 428
BcoDI GTCTC 3 cut(s) 95, 339, 411
BfaI CTAG 1 cut(s) 1039
BfmI CTRYAG 1 cut(s) 835
BisI GCNGC 7 cut(s) 191, 194, 197, 296, 375, 471, 492
BlsI GCNGC 7 cut(s) 192, 195, 198, 297, 376, 472, 493
Bme1390I CCNGG 6 cut(s) 182, 210, 270, 428, 541, 646
Bme18I GGWCC 1 cut(s) 766
BmeT110I CYCGRG 1 cut(s) 299
BmgT120I GGNCC 2 cut(s) 429, 766
BmiI GGNNCC 4 cut(s) 214, 247, 520, 768
BmrFI CCNGG 6 cut(s) 182, 210, 270, 428, 541, 646
BmrI ACTGGG 2 cut(s) 35, 835
BmuI ACTGGG 2 cut(s) 35, 835
BpmI CTGGAG 2 cut(s) 119, 583
BpuMI CCSGG 3 cut(s) 210, 270, 428
BsaAI YACGTR 1 cut(s) 930
BsaBI GATNNNNATC 2 cut(s) 68, 911
BsaHI GRCGYC 4 cut(s) 110, 228, 237, 404
BsaJI CCNNGG 2 cut(s) 208, 540
BsaWI WCCGGW 3 cut(s) 91, 443, 679
BsaXI ACNNNNNCTCC 2 cut(s) 510, 540
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 276, 686, 943
Bse118I RCCGGY 2 cut(s) 377, 388
Bse1I ACTGG 5 cut(s) 30, 102, 756, 809, 830
Bse3DI GCAATG 2 cut(s) 528, 714
Bse8I GATNNNNATC 2 cut(s) 68, 911
BseBI CCWGG 3 cut(s) 182, 541, 646
BseDI CCNNGG 2 cut(s) 208, 540
BseGI GGATG 3 cut(s) 204, 670, 912
BseJI GATNNNNATC 2 cut(s) 68, 911
BseLI CCNNNNNNNGG 4 cut(s) 40, 276, 686, 943
BseMI GCAATG 2 cut(s) 528, 714
BseMII CTCAG 2 cut(s) 326, 540
BseNI ACTGG 5 cut(s) 30, 102, 756, 809, 830
BseRI GAGGAG 1 cut(s) 68
BseX3I CGGCCG 1 cut(s) 375
BseXI GCAGC 1 cut(s) 183
Bsh1236I CGCG 2 cut(s) 293, 898
Bsh1285I CGRYCG 1 cut(s) 378
BshFI GGCC 3 cut(s) 377, 431, 947
BsiEI CGRYCG 1 cut(s) 378
BsiHKAI GWGCWC 2 cut(s) 443, 733
BsiHKCI CYCGRG 1 cut(s) 299
BslFI GGGAC 2 cut(s) 415, 752
BslI CCNNNNNNNGG 4 cut(s) 40, 276, 686, 943
BsmAI GTCTC 3 cut(s) 95, 339, 411
BsmBI CGTCTC 1 cut(s) 411
BsmFI GGGAC 2 cut(s) 415, 752
BsnI GGCC 3 cut(s) 377, 431, 947
BsoBI CYCGRG 1 cut(s) 299
Bsp1286I GDGCHC 2 cut(s) 443, 733
Bsp143I GATC 6 cut(s) 69, 328, 364, 583, 676, 906
BspANI GGCC 3 cut(s) 377, 431, 947
BspCNI CTCAG 2 cut(s) 325, 541
BspFNI CGCG 2 cut(s) 293, 898
BspLI GGNNCC 4 cut(s) 214, 247, 520, 768
BspPI GGATC 1 cut(s) 671
BspQI GCTCTTC 1 cut(s) 71
BsrBI CCGCTC 1 cut(s) 298
BsrDI GCAATG 2 cut(s) 528, 714
BsrFI RCCGGY 2 cut(s) 377, 388
BsrI ACTGG 5 cut(s) 30, 102, 756, 809, 830
BssAI RCCGGY 2 cut(s) 377, 388
BssECI CCNNGG 2 cut(s) 208, 540
BssMI GATC 6 cut(s) 69, 328, 364, 583, 676, 906
BssNI GRCGYC 4 cut(s) 110, 228, 237, 404
Bst2UI CCWGG 3 cut(s) 182, 541, 646
Bst4CI ACNGT 1 cut(s) 811
Bst6I CTCTTC 2 cut(s) 71, 342
BstACI GRCGYC 4 cut(s) 110, 228, 237, 404
BstBAI YACGTR 1 cut(s) 930
BstC8I GCNNGC 1 cut(s) 938
BstDEI CTNAG 2 cut(s) 312, 549
BstEII GGTNACC 1 cut(s) 29
BstENI CCTNNNNNAGG 1 cut(s) 941
BstF5I GGATG 3 cut(s) 204, 670, 912
BstFNI CGCG 2 cut(s) 293, 898
BstHHI GCGC 2 cut(s) 295, 898
BstKTI GATC 6 cut(s) 72, 331, 367, 586, 679, 909
BstMAI GTCTC 3 cut(s) 95, 339, 411
BstMBI GATC 6 cut(s) 69, 328, 364, 583, 676, 906
BstMCI CGRYCG 1 cut(s) 378
BstMWI GCNNNNNNNGC 6 cut(s) 196, 380, 545, 788, 953, 962
BstNI CCWGG 3 cut(s) 182, 541, 646
BstPI GGTNACC 1 cut(s) 29
BstSCI CCNGG 6 cut(s) 180, 208, 268, 426, 539, 644
BstSFI CTRYAG 1 cut(s) 835
BstSNI TACGTA 1 cut(s) 930
BstUI CGCG 2 cut(s) 293, 898
BstV1I GCAGC 1 cut(s) 183
BstZI CGGCCG 1 cut(s) 375
BsuRI GGCC 3 cut(s) 377, 431, 947
BtsCI GGATG 3 cut(s) 204, 670, 912
BtsI GCAGTG 1 cut(s) 1027
BtsIMutI CAGTG 3 cut(s) 763, 816, 1027
Cac8I GCNNGC 1 cut(s) 938
CfoI GCGC 2 cut(s) 295, 898
Cfr10I RCCGGY 2 cut(s) 377, 388
Cfr13I GGNCC 2 cut(s) 429, 766
CseI GACGC 2 cut(s) 217, 245
Csp6I GTAC 4 cut(s) 178, 497, 823, 931
CviAII CATG 3 cut(s) 410, 587, 815
CviQI GTAC 4 cut(s) 178, 497, 823, 931
DdeI CTNAG 2 cut(s) 312, 549
DpnI GATC 6 cut(s) 71, 330, 366, 585, 678, 908
DpnII GATC 6 cut(s) 69, 328, 364, 583, 676, 906
DrdI GACNNNNNNGTC 1 cut(s) 109
DseDI GACNNNNNNGTC 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 375
EagI CGGCCG 1 cut(s) 375
Eam1104I CTCTTC 2 cut(s) 71, 342
EarI CTCTTC 2 cut(s) 71, 342
EciI GGCGGA 2 cut(s) 56, 238
Ecl136II GAGCTC 1 cut(s) 441
EclXI CGGCCG 1 cut(s) 375
Eco105I TACGTA 1 cut(s) 930
Eco24I GRGCYC 1 cut(s) 443
Eco47I GGWCC 1 cut(s) 766
Eco52I CGGCCG 1 cut(s) 375
Eco53kI GAGCTC 1 cut(s) 441
Eco57I CTGAAG 1 cut(s) 146
Eco88I CYCGRG 1 cut(s) 299
Eco91I GGTNACC 1 cut(s) 29
EcoICRI GAGCTC 1 cut(s) 441
EcoNI CCTNNNNNAGG 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 766
EcoO65I GGTNACC 1 cut(s) 29
EcoRI GAATTC 1 cut(s) 46
EcoRII CCWGG 3 cut(s) 180, 539, 644
EcoT38I GRGCYC 1 cut(s) 443
Esp3I CGTCTC 1 cut(s) 411
FaeI CATG 3 cut(s) 413, 590, 818
FaiI YATR 5 cut(s) 411, 588, 675, 816, 927
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FaqI GGGAC 2 cut(s) 415, 752
FatI CATG 3 cut(s) 409, 586, 814
FauI CCCGC 2 cut(s) 466, 859
FbaI TGATCA 2 cut(s) 583, 906
FblI GTMKAC 1 cut(s) 234
Fnu4HI GCNGC 7 cut(s) 191, 194, 197, 296, 375, 471, 492
FokI GGATG 3 cut(s) 191, 677, 899
FriOI GRGCYC 1 cut(s) 443
Fsp4HI GCNGC 7 cut(s) 191, 194, 197, 296, 375, 471, 492
FspBI CTAG 1 cut(s) 1039
GlaI GCGC 2 cut(s) 294, 897
GluI GCNGC 7 cut(s) 191, 194, 197, 296, 375, 471, 492
GsuI CTGGAG 2 cut(s) 119, 583
HaeIII GGCC 3 cut(s) 377, 431, 947
HgaI GACGC 2 cut(s) 217, 245
HhaI GCGC 2 cut(s) 295, 898
Hin1I GRCGYC 4 cut(s) 110, 228, 237, 404
Hin1II CATG 3 cut(s) 413, 590, 818
Hin6I GCGC 2 cut(s) 293, 896
HinP1I GCGC 2 cut(s) 293, 896
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HindIII AAGCTT 2 cut(s) 650, 692
HinfI GANTC 4 cut(s) 103, 126, 596, 866
HphI GGTGA 4 cut(s) 41, 127, 416, 901
Hpy166II GTNNAC 2 cut(s) 235, 595
Hpy188I TCNGA 7 cut(s) 52, 87, 108, 165, 217, 266, 609
Hpy188III TCNNGA 4 cut(s) 73, 637, 860, 1007
Hpy8I GTNNAC 2 cut(s) 235, 595
Hpy99I CGWCG 7 cut(s) 112, 115, 233, 236, 239, 245, 326
HpyAV CCTTC 6 cut(s) 170, 298, 502, 547, 622, 706
HpyCH4III ACNGT 1 cut(s) 811
HpyCH4IV ACGT 3 cut(s) 110, 404, 929
HpyCH4V TGCA 2 cut(s) 18, 814
HpyF10VI GCNNNNNNNGC 6 cut(s) 196, 380, 545, 788, 953, 962
HpyF3I CTNAG 2 cut(s) 312, 549
HpySE526I ACGT 3 cut(s) 110, 404, 929
Hsp92I GRCGYC 4 cut(s) 110, 228, 237, 404
Hsp92II CATG 3 cut(s) 413, 590, 818
HspAI GCGC 2 cut(s) 293, 896
Ksp22I TGATCA 2 cut(s) 583, 906
Kzo9I GATC 6 cut(s) 69, 328, 364, 583, 676, 906
LguI GCTCTTC 1 cut(s) 71
LmnI GCTCC 7 cut(s) 218, 251, 290, 446, 518, 545, 728
Lsp1109I GCAGC 1 cut(s) 183
MaeI CTAG 1 cut(s) 1039
MaeII ACGT 3 cut(s) 110, 404, 929
MaeIII GTNAC 2 cut(s) 29, 253
MalI GATC 6 cut(s) 71, 330, 366, 585, 678, 908
MbiI CCGCTC 1 cut(s) 298
MboI GATC 6 cut(s) 69, 328, 364, 583, 676, 906
MboII GAAGA 3 cut(s) 88, 329, 875
MhlI GDGCHC 2 cut(s) 443, 733
MluCI AATT 4 cut(s) 46, 433, 721, 878
MlyI GAGTC 3 cut(s) 97, 135, 590
MmeI TCCRAC 4 cut(s) 131, 463, 496, 664
MnlI CCTC 8 cut(s) 46, 349, 470, 680, 697, 757, 893, 937
MroXI GAANNNNTTC 1 cut(s) 632
MseI TTAA 3 cut(s) 654, 798, 873
MspA1I CMGCKG 2 cut(s) 196, 854
MspR9I CCNGG 6 cut(s) 182, 210, 270, 428, 541, 646
MvaI CCWGG 3 cut(s) 182, 541, 646
MvnI CGCG 2 cut(s) 293, 898
MwoI GCNNNNNNNGC 6 cut(s) 196, 380, 545, 788, 953, 962
NciI CCSGG 3 cut(s) 210, 270, 428
NdeII GATC 6 cut(s) 69, 328, 364, 583, 676, 906
NlaIII CATG 3 cut(s) 413, 590, 818
NlaIV GGNNCC 4 cut(s) 214, 247, 520, 768
NmeAIII GCCGAG 1 cut(s) 150
NmuCI GTSAC 2 cut(s) 29, 253
PciSI GCTCTTC 1 cut(s) 71
PcsI WCGNNNNNNNCGW 2 cut(s) 237, 249
PdmI GAANNNNTTC 1 cut(s) 632
PfeI GAWTC 1 cut(s) 866
PflFI GACNNNGTC 1 cut(s) 239
PkrI GCNGC 7 cut(s) 192, 195, 198, 297, 376, 472, 493
PleI GAGTC 3 cut(s) 97, 134, 590
PpsI GAGTC 3 cut(s) 97, 134, 590
Ppu21I YACGTR 1 cut(s) 930
PpuMI RGGWCCY 1 cut(s) 766
Psp124BI GAGCTC 1 cut(s) 443
Psp5II RGGWCCY 1 cut(s) 766
Psp6I CCWGG 3 cut(s) 180, 539, 644
PspEI GGTNACC 1 cut(s) 29
PspGI CCWGG 3 cut(s) 180, 539, 644
PspN4I GGNNCC 4 cut(s) 214, 247, 520, 768
PspPI GGNCC 2 cut(s) 429, 766
PspPPI RGGWCCY 1 cut(s) 766
PsyI GACNNNGTC 1 cut(s) 239
RsaI GTAC 4 cut(s) 179, 498, 824, 932
RsaNI GTAC 4 cut(s) 178, 497, 823, 931
SacI GAGCTC 1 cut(s) 443
SalI GTCGAC 1 cut(s) 233
SapI GCTCTTC 1 cut(s) 71
SaqAI TTAA 3 cut(s) 654, 798, 873
SatI GCNGC 7 cut(s) 191, 194, 197, 296, 375, 471, 492
Sau3AI GATC 6 cut(s) 69, 328, 364, 583, 676, 906
Sau96I GGNCC 2 cut(s) 429, 766
SchI GAGTC 3 cut(s) 97, 135, 590
ScrFI CCNGG 6 cut(s) 182, 210, 270, 428, 541, 646
SduI GDGCHC 2 cut(s) 443, 733
SfcI CTRYAG 1 cut(s) 835
SgrDI CGTCGACG 1 cut(s) 233
SinI GGWCC 1 cut(s) 766
SnaBI TACGTA 1 cut(s) 930
Sse9I AATT 4 cut(s) 46, 433, 721, 878
SspI AATATT 1 cut(s) 787
SspMI CTAG 1 cut(s) 1039
SstI GAGCTC 1 cut(s) 443
StyD4I CCNGG 6 cut(s) 180, 208, 268, 426, 539, 644
TaaI ACNGT 1 cut(s) 811
TaiI ACGT 3 cut(s) 113, 407, 932
TaqI TCGA 3 cut(s) 72, 234, 847
TasI AATT 4 cut(s) 46, 433, 721, 878
TatI WGTACW 1 cut(s) 822
TauI GCSGC 6 cut(s) 193, 196, 298, 377, 473, 494
TfiI GAWTC 1 cut(s) 866
Tru1I TTAA 3 cut(s) 654, 798, 873
Tru9I TTAA 3 cut(s) 654, 798, 873
TscAI CASTG 3 cut(s) 763, 816, 1027
TseFI GTSAC 2 cut(s) 29, 253
TseI GCWGC 1 cut(s) 196
Tsp45I GTSAC 2 cut(s) 29, 253
TspDTI ATGAA 4 cut(s) 193, 307, 725, 891
TspRI CASTG 3 cut(s) 763, 816, 1027
Tth111I GACNNNGTC 1 cut(s) 239
VpaK11BI GGWCC 1 cut(s) 766
XagI CCTNNNNNAGG 1 cut(s) 941
XapI RAATTY 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 632
XspI CTAG 1 cut(s) 1039
ZraI GACGTC 2 cut(s) 111, 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.