FvH4_7g33880

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0003784
Physical Location & Seq
Reverse (-)
24007361 .. 24011488
4128 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33880.t1

Sequence Viewer

Length: 1527 bp
ATGATGAGGCTGCAAACCTACGCTGGGCTGAGTTTGATCGGAACCCTAGCGATTATTTACCATGCGTTTAGCAGCAGAGGCCAGTTTTACCCAGCCATGGTTTATCTATCAACCTCCAAGATCAGCCTGGTGCTTCTCCTCAACGAGCAGTCGTGGAGGGAAGTCATGGAGATTCTGTTTGCAATCACGATTTTCAGGCAGGACTTTTCGGTGTCGTTTCTGGCTTTTGTTACTGCTCTGTTGCTGATAAAGGCTCTGCATTGGTTGGCGCAGAAGAGAGTGGAGTACATTGAGACTACTCCTTCTGTGCCGACGCTGTCGCATGTGAGGATTGTGTCGTTTTTGGGGTTCTTGTTTGTTGTAGATAGTCTCTTTTTGTACAGTGCTGTCAGAACCATCGTAGCCACTCAGAAGCCTTCGGTTTGCCTCTTTTTTGCATTCGAGTACATGATCCTAGCAACGACAACGCTGTCAACATTTGTGAAATATATTTTCTATGTCACTGACATGATTATGGAGGGACAATGGGAGAAGAAGCATGTCTACACTTTTTATTTGGAACTTATTCGGGACTTGCTCCACTTGTCTATGTATTTGTGCTTCTTCATTGTGATTTTCATGTACTATGGCTTGCCAGTGCACTTGATTCGCGAACTCTATGAGACCTTTAGGAACTTTAAGATTCGTGTTGCTGATTACGTCCGTTATCGAAAAATCACTTCAAACATGAATGATCGGTTCCCAGACGCTACACCTGAAGAGCTTAATGCAGGCGACGCAACCTGCATCATTTGTCGTGAAGAAATGACAACAGCCAAGAAACTATTATGTGGACACCTTTTTCATGTGGCTTGCTTGCGATCATGGTTGGAGCGACAACATACCTGCCCAACATGCAGAGCCCTTGTTGTACCTCCTGATGGTCGGACAGGTACTGCTCGAGGACAAAGTGGATCACGCCCCGATGCTCATCAACAGGGGACAGGCATATCAGGTGCAACTGCTCAAGGATCAACTAGTGGTGGAGCTGCTGGTGATAACATGAGCCATCATGAAGCAAGACTCCGAGCTGCTGCTGCAGCTGCATCAATATATGAGAAATCTTATGTATATCCATCTGCAAACAGACTAGTATGGTCTTCTGGATATGTGGCACTTCCTCTTAATAGACATATGGCTGAGTCCTCTAGTGCTGAATTACATTCACAACCGCAGTTTGCAACCCCTGGTGGACCTGCAAACTTGTCATTGCCTCAATCTCCGCATTACATGTTTTCTCCTTTTCATGGAGCCAATGGGGAGAGGTTGGGCAGCGGTTCAAATACAACAGCTTCTCAGCTGGAGGCCCAGAGAAAAGTTCTTCTGCACCAGATTGAGATCCTGAAGAATCAGCTCCAAATTTTACAAAAGCGAAAACCCGAGGAGAATGCGGAAGGGGTACCAACATTAGCAGCAGATAGCAAAGGAAAGAATGTGGCACCTTCTTCTGAATCAGATTGCGGGCTTGGTGAGGATGTTGTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000153 GO:0000209 GO:0000835 GO:0000836 GO:0002020 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030433 GO:0030968 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034620 GO:0034645 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044322 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070085 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071944 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1902494 GO:1990234 GO:1990381
KEGG Pathways
Metabolic & Signaling
ko04120 ko04141 map04120 map04141
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

509

Amino Acids

56.77

Weight (kDa)

8.27

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_SYVN1_N PF25563 3 - 48 4.9e-10 E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
TPR_SYVN1_N PF25563 47 - 242 4.4e-75 E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-rbx1 PF12678 259 - 300 6.2e-08 RING-H2 zinc finger domain
zf-RING_2 PF13639 261 - 300 7.3e-11 Ring finger domain
zf-C3HC4 PF00097 262 - 299 6.6e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 262 - 297 1.2e-06 RING-type zinc-finger
zf-C3HC4_2 PF13923 262 - 299 2.9e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 469
Acc36I ACCTGC 3 cut(s) 791, 893, 1243
Acc65I GGTACC 1 cut(s) 1438
AccB1I GGYRCC 2 cut(s) 1438, 1477
AccI GTMKAC 1 cut(s) 543
AccII CGCG 1 cut(s) 651
AciI CCGC 5 cut(s) 1211, 1262, 1314, 1430, 1500
AclWI GGATC 4 cut(s) 445, 961, 1018, 1372
AcsI RAATTY 1 cut(s) 1398
AcuI CTGAAG 2 cut(s) 777, 1403
AfaI GTAC 7 cut(s) 287, 380, 446, 623, 912, 934, 1440
AfiI CCNNNNNNNGG 4 cut(s) 24, 97, 920, 1286
AflIII ACRYGT 1 cut(s) 1269
AgsI TTSAA 2 cut(s) 723, 1320
AhlI ACTAGT 2 cut(s) 1016, 1129
AjnI CCWGG 2 cut(s) 126, 1225
AluBI AGCT 7 cut(s) 763, 1028, 1070, 1082, 1331, 1339, 1393
AluI AGCT 7 cut(s) 763, 1028, 1070, 1082, 1331, 1339, 1393
Alw21I GWGCWC 1 cut(s) 642
Alw26I GTCTC 3 cut(s) 287, 374, 656
Alw44I GTGCAC 1 cut(s) 638
AlwI GGATC 4 cut(s) 445, 961, 1018, 1372
AlwNI CAGNNNCTG 1 cut(s) 935
Ama87I CYCGRG 2 cut(s) 939, 1418
AoxI GGCC 2 cut(s) 79, 1344
ApaLI GTGCAC 1 cut(s) 638
ApoI RAATTY 1 cut(s) 1398
Asp700I GAANNNNTTC 1 cut(s) 564
Asp718I GGTACC 1 cut(s) 1438
AspLEI GCGC 1 cut(s) 271
AspS9I GGNCC 2 cut(s) 1232, 1345
AsuHPI GGTGA 2 cut(s) 1046, 1520
AvaI CYCGRG 2 cut(s) 939, 1418
AvaII GGWCC 1 cut(s) 1232
BaeGI GKGCMC 1 cut(s) 642
BanI GGYRCC 2 cut(s) 1438, 1477
BanII GRGCYC 1 cut(s) 904
BarI GAAGNNNNNNTAC 4 cut(s) 527, 559, 584, 616
BbsI GAAGAC 1 cut(s) 1131
Bbv12I GWGCWC 1 cut(s) 642
BbvI GCAGC 9 cut(s) 84, 1015, 1057, 1060, 1063, 1069, 1091, 1323, 1463
BccI CCATC 4 cut(s) 404, 914, 1056, 1123
BcgI CGANNNNNNTGC 4 cut(s) 629, 663, 1409, 1443
BciT130I CCWGG 2 cut(s) 128, 1227
BcoDI GTCTC 3 cut(s) 287, 374, 656
BcuI ACTAGT 2 cut(s) 1016, 1129
BfaI CTAG 6 cut(s) 47, 455, 1017, 1130, 1188, 1525
BfmI CTRYAG 1 cut(s) 1077
BfuAI ACCTGC 3 cut(s) 791, 893, 1243
Bme1390I CCNGG 2 cut(s) 128, 1227
Bme18I GGWCC 1 cut(s) 1232
BmeT110I CYCGRG 2 cut(s) 939, 1418
BmgT120I GGNCC 2 cut(s) 1232, 1345
BmiI GGNNCC 5 cut(s) 43, 740, 1291, 1440, 1479
BmrFI CCNGG 2 cut(s) 128, 1227
BmsI GCATC 3 cut(s) 795, 955, 1094
BpiI GAAGAC 1 cut(s) 1131
BpmI CTGGAG 1 cut(s) 1361
BpuEI CTTGAG 1 cut(s) 990
BsaBI GATNNNNATC 2 cut(s) 969, 1376
BsaI GGTCTC 1 cut(s) 656
BsaJI CCNNGG 3 cut(s) 96, 1225, 1419
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 97, 920, 1286
Bse1I ACTGG 2 cut(s) 82, 635
Bse3DI GCAATG 1 cut(s) 1247
Bse8I GATNNNNATC 2 cut(s) 969, 1376
BseBI CCWGG 2 cut(s) 128, 1227
BseDI CCNNGG 3 cut(s) 96, 1225, 1419
BseGI GGATG 1 cut(s) 1519
BseJI GATNNNNATC 2 cut(s) 969, 1376
BseLI CCNNNNNNNGG 4 cut(s) 24, 97, 920, 1286
BseMI GCAATG 1 cut(s) 1247
BseMII CTCAG 4 cut(s) 20, 422, 1170, 1349
BseNI ACTGG 2 cut(s) 82, 635
BseRI GAGGAG 2 cut(s) 128, 1436
BseSI GKGCMC 1 cut(s) 642
BseXI GCAGC 9 cut(s) 84, 1015, 1057, 1060, 1063, 1069, 1091, 1323, 1463
BseYI CCCAGC 2 cut(s) 23, 91
BsgI GTGCAG 1 cut(s) 1349
Bsh1236I CGCG 1 cut(s) 651
BshFI GGCC 2 cut(s) 81, 1346
BshNI GGYRCC 2 cut(s) 1438, 1477
BsiHKAI GWGCWC 1 cut(s) 642
BsiHKCI CYCGRG 2 cut(s) 939, 1418
BslFI GGGAC 3 cut(s) 534, 584, 994
BslI CCNNNNNNNGG 4 cut(s) 24, 97, 920, 1286
BsmAI GTCTC 3 cut(s) 287, 374, 656
BsmFI GGGAC 3 cut(s) 534, 584, 994
BsmI GAATGC 2 cut(s) 437, 1432
BsnI GGCC 2 cut(s) 81, 1346
Bso31I GGTCTC 1 cut(s) 656
BsoBI CYCGRG 2 cut(s) 939, 1418
Bsp1286I GDGCHC 2 cut(s) 642, 904
Bsp1407I TGTACA 1 cut(s) 378
Bsp143I GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
Bsp19I CCATGG 1 cut(s) 96
Bsp68I TCGCGA 1 cut(s) 651
BspACI CCGC 5 cut(s) 1211, 1262, 1314, 1430, 1500
BspANI GGCC 2 cut(s) 81, 1346
BspCNI CTCAG 4 cut(s) 21, 421, 1171, 1348
BspFNI CGCG 1 cut(s) 651
BspHI TCATGA 1 cut(s) 1051
BspLI GGNNCC 5 cut(s) 43, 740, 1291, 1440, 1479
BspMAI CTGCAG 1 cut(s) 1081
BspMI ACCTGC 3 cut(s) 791, 893, 1243
BspPI GGATC 4 cut(s) 445, 961, 1018, 1372
BspQI GCTCTTC 1 cut(s) 753
BspT107I GGYRCC 2 cut(s) 1438, 1477
BspTNI GGTCTC 1 cut(s) 656
BsrDI GCAATG 1 cut(s) 1247
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 2 cut(s) 82, 635
BssECI CCNNGG 3 cut(s) 96, 1225, 1419
BssMI GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
BssT1I CCWWGG 1 cut(s) 96
Bst2UI CCWGG 2 cut(s) 128, 1227
Bst4CI ACNGT 1 cut(s) 383
Bst6I CTCTTC 2 cut(s) 269, 753
BstAUI TGTACA 1 cut(s) 378
BstC8I GCNNGC 5 cut(s) 632, 772, 853, 857, 1502
BstDEI CTNAG 4 cut(s) 29, 408, 1179, 1335
BstDSI CCRYGG 1 cut(s) 96
BstF5I GGATG 1 cut(s) 1519
BstFNI CGCG 1 cut(s) 651
BstHHI GCGC 1 cut(s) 271
BstKTI GATC 8 cut(s) 39, 123, 453, 736, 863, 956, 1013, 1380
BstMAI GTCTC 3 cut(s) 287, 374, 656
BstMBI GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
BstMWI GCNNNNNNNGC 6 cut(s) 78, 776, 894, 1076, 1079, 1082
BstNI CCWGG 2 cut(s) 128, 1227
BstNSI RCATGY 4 cut(s) 326, 542, 897, 1273
BstSCI CCNGG 2 cut(s) 126, 1225
BstSFI CTRYAG 1 cut(s) 1077
BstSLI GKGCMC 1 cut(s) 642
BstUI CGCG 1 cut(s) 651
BstV1I GCAGC 9 cut(s) 84, 1015, 1057, 1060, 1063, 1069, 1091, 1323, 1463
BstV2I GAAGAC 1 cut(s) 1131
BstX2I RGATCY 1 cut(s) 1377
BstYI RGATCY 1 cut(s) 1377
BsuRI GGCC 2 cut(s) 81, 1346
BtgI CCRYGG 1 cut(s) 96
BtsCI GGATG 1 cut(s) 1519
BtsIMutI CAGTG 3 cut(s) 388, 501, 642
BtuMI TCGCGA 1 cut(s) 651
BveI ACCTGC 3 cut(s) 791, 893, 1243
Cac8I GCNNGC 5 cut(s) 632, 772, 853, 857, 1502
CaiI CAGNNNCTG 1 cut(s) 935
CciI TCATGA 1 cut(s) 1051
CfoI GCGC 1 cut(s) 271
Cfr13I GGNCC 2 cut(s) 1232, 1345
CseI GACGC 3 cut(s) 322, 755, 785
Csp6I GTAC 7 cut(s) 286, 379, 445, 622, 911, 933, 1439
CviQI GTAC 7 cut(s) 286, 379, 445, 622, 911, 933, 1439
DdeI CTNAG 4 cut(s) 29, 408, 1179, 1335
DpnI GATC 8 cut(s) 38, 122, 452, 735, 862, 955, 1012, 1379
DpnII GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
DrdI GACNNNNNNGTC 1 cut(s) 469
DseDI GACNNNNNNGTC 1 cut(s) 469
Eam1104I CTCTTC 2 cut(s) 269, 753
EarI CTCTTC 2 cut(s) 269, 753
Eco130I CCWWGG 1 cut(s) 96
Eco24I GRGCYC 1 cut(s) 904
Eco31I GGTCTC 1 cut(s) 656
Eco47I GGWCC 1 cut(s) 1232
Eco57I CTGAAG 2 cut(s) 777, 1403
Eco88I CYCGRG 2 cut(s) 939, 1418
EcoRII CCWGG 2 cut(s) 126, 1225
EcoT14I CCWWGG 1 cut(s) 96
EcoT38I GRGCYC 1 cut(s) 904
ErhI CCWWGG 1 cut(s) 96
FaqI GGGAC 3 cut(s) 534, 584, 994
FauI CCCGC 1 cut(s) 1493
FauNDI CATATG 1 cut(s) 1173
FblI GTMKAC 1 cut(s) 543
FriOI GRGCYC 1 cut(s) 904
FspBI CTAG 6 cut(s) 47, 455, 1017, 1130, 1188, 1525
GlaI GCGC 1 cut(s) 270
GsaI CCCAGC 2 cut(s) 27, 95
GsuI CTGGAG 1 cut(s) 1361
HaeIII GGCC 2 cut(s) 81, 1346
HgaI GACGC 3 cut(s) 322, 755, 785
HhaI GCGC 1 cut(s) 271
Hin6I GCGC 1 cut(s) 269
HinP1I GCGC 1 cut(s) 269
HincII GTYRAC 2 cut(s) 474, 1522
HindII GTYRAC 2 cut(s) 474, 1522
HinfI GANTC 7 cut(s) 172, 646, 682, 1062, 1181, 1387, 1490
HphI GGTGA 2 cut(s) 1046, 1520
Hpy166II GTNNAC 6 cut(s) 474, 544, 640, 833, 1232, 1522
Hpy188I TCNGA 7 cut(s) 41, 392, 411, 927, 1067, 1489, 1495
Hpy188III TCNNGA 8 cut(s) 187, 569, 650, 797, 917, 1052, 1143, 1381
Hpy8I GTNNAC 6 cut(s) 474, 544, 640, 833, 1232, 1522
Hpy99I CGWCG 2 cut(s) 316, 779
HpyAV CCTTC 4 cut(s) 312, 426, 1427, 1491
HpyCH4III ACNGT 1 cut(s) 383
HpyCH4IV ACGT 1 cut(s) 699
HpyF10VI GCNNNNNNNGC 6 cut(s) 78, 776, 894, 1076, 1079, 1082
HpyF3I CTNAG 4 cut(s) 29, 408, 1179, 1335
HpySE526I ACGT 1 cut(s) 699
HspAI GCGC 1 cut(s) 269
KpnI GGTACC 1 cut(s) 1442
Kzo9I GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
LguI GCTCTTC 1 cut(s) 753
LmnI GCTCC 5 cut(s) 582, 871, 1025, 1289, 1398
Lsp1109I GCAGC 9 cut(s) 84, 1015, 1057, 1060, 1063, 1069, 1091, 1323, 1463
LweI GCATC 3 cut(s) 795, 955, 1094
MaeI CTAG 6 cut(s) 47, 455, 1017, 1130, 1188, 1525
MaeII ACGT 1 cut(s) 699
MaeIII GTNAC 2 cut(s) 229, 499
MalI GATC 8 cut(s) 38, 122, 452, 735, 862, 955, 1012, 1379
MboI GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
MboII GAAGA 9 cut(s) 286, 544, 595, 770, 812, 1131, 1352, 1396, 1476
MflI RGATCY 1 cut(s) 1377
MhlI GDGCHC 2 cut(s) 642, 904
MluCI AATT 2 cut(s) 1196, 1398
MlyI GAGTC 2 cut(s) 1056, 1190
MmeI TCCRAC 2 cut(s) 849, 905
MroXI GAANNNNTTC 1 cut(s) 564
MseI TTAA 3 cut(s) 678, 765, 1164
MslI CAYNNNNRTG 2 cut(s) 506, 512
MspA1I CMGCKG 3 cut(s) 1082, 1314, 1339
MspR9I CCNGG 2 cut(s) 128, 1227
Mva1269I GAATGC 2 cut(s) 437, 1432
MvaI CCWGG 2 cut(s) 128, 1227
MvnI CGCG 1 cut(s) 651
MwoI GCNNNNNNNGC 6 cut(s) 78, 776, 894, 1076, 1079, 1082
NcoI CCATGG 1 cut(s) 96
NdeI CATATG 1 cut(s) 1173
NdeII GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
NlaIV GGNNCC 5 cut(s) 43, 740, 1291, 1440, 1479
NmuCI GTSAC 1 cut(s) 499
NruI TCGCGA 1 cut(s) 651
NspI RCATGY 4 cut(s) 326, 542, 897, 1273
PaeR7I CTCGAG 1 cut(s) 939
PagI TCATGA 1 cut(s) 1051
PciI ACATGT 1 cut(s) 1269
PciSI GCTCTTC 1 cut(s) 753
PctI GAATGC 2 cut(s) 437, 1432
PdmI GAANNNNTTC 1 cut(s) 564
PfeI GAWTC 5 cut(s) 172, 646, 682, 1387, 1490
PflFI GACNNNGTC 1 cut(s) 316
PleI GAGTC 2 cut(s) 1056, 1189
PpsI GAGTC 2 cut(s) 1056, 1189
PscI ACATGT 1 cut(s) 1269
Psp6I CCWGG 2 cut(s) 126, 1225
PspFI CCCAGC 2 cut(s) 23, 91
PspGI CCWGG 2 cut(s) 126, 1225
PspN4I GGNNCC 5 cut(s) 43, 740, 1291, 1440, 1479
PspPI GGNCC 2 cut(s) 1232, 1345
PspXI VCTCGAGB 1 cut(s) 939
PstI CTGCAG 1 cut(s) 1081
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 1377
PsyI GACNNNGTC 1 cut(s) 316
PvuII CAGCTG 2 cut(s) 1082, 1339
RruI TCGCGA 1 cut(s) 651
RsaI GTAC 7 cut(s) 287, 380, 446, 623, 912, 934, 1440
RsaNI GTAC 7 cut(s) 286, 379, 445, 622, 911, 933, 1439
RseI CAYNNNNRTG 2 cut(s) 506, 512
SapI GCTCTTC 1 cut(s) 753
SaqAI TTAA 3 cut(s) 678, 765, 1164
Sau3AI GATC 8 cut(s) 36, 120, 450, 733, 860, 953, 1010, 1377
Sau96I GGNCC 2 cut(s) 1232, 1345
SchI GAGTC 2 cut(s) 1056, 1190
ScrFI CCNGG 2 cut(s) 128, 1227
SduI GDGCHC 2 cut(s) 642, 904
SfaNI GCATC 3 cut(s) 795, 955, 1094
SfcI CTRYAG 1 cut(s) 1077
Sfr274I CTCGAG 1 cut(s) 939
SinI GGWCC 1 cut(s) 1232
SlaI CTCGAG 1 cut(s) 939
SmiMI CAYNNNNRTG 2 cut(s) 506, 512
SmlI CTYRAG 2 cut(s) 939, 1005
SmoI CTYRAG 2 cut(s) 939, 1005
SpeI ACTAGT 2 cut(s) 1016, 1129
Sse9I AATT 2 cut(s) 1196, 1398
SsiI CCGC 5 cut(s) 1211, 1262, 1314, 1430, 1500
SspMI CTAG 6 cut(s) 47, 455, 1017, 1130, 1188, 1525
StyD4I CCNGG 2 cut(s) 126, 1225
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 1 cut(s) 383
TaiI ACGT 1 cut(s) 702
TaqI TCGA 3 cut(s) 441, 709, 940
TasI AATT 2 cut(s) 1196, 1398
TatI WGTACW 4 cut(s) 285, 378, 444, 621
TfiI GAWTC 5 cut(s) 172, 646, 682, 1387, 1490
Tru1I TTAA 3 cut(s) 678, 765, 1164
Tru9I TTAA 3 cut(s) 678, 765, 1164
TscAI CASTG 3 cut(s) 388, 508, 642
TseFI GTSAC 1 cut(s) 499
Tsp45I GTSAC 1 cut(s) 499
TspDTI ATGAA 6 cut(s) 595, 607, 743, 833, 1068, 1274
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 3 cut(s) 388, 508, 642
Tth111I GACNNNGTC 1 cut(s) 316
VneI GTGCAC 1 cut(s) 638
VpaK11BI GGWCC 1 cut(s) 1232
XapI RAATTY 1 cut(s) 1398
XceI RCATGY 4 cut(s) 326, 542, 897, 1273
XcmI CCANNNNNNNNNTGG 1 cut(s) 124
XhoI CTCGAG 1 cut(s) 939
XmiI GTMKAC 1 cut(s) 543
XmnI GAANNNNTTC 1 cut(s) 564
XspI CTAG 6 cut(s) 47, 455, 1017, 1130, 1188, 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.