MD07G1308100.v1.1

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0003784
Physical Location & Seq
Reverse (-)
36403684 .. 36407456
3773 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1308100.v1.1.491

Sequence Viewer

Length: 1632 bp
ATGATGAAGCTGCAAACCTATGGCGGGGTTAGTTTGGTAGCAACCCTAGCGATTGTTTATCATGCATTTAGCAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATTTGTCGACGTCGAAGATCAGCTTGGTGTTGCTTCTCAACATGGGTCTGGTTATTATGTGTACTATGTGGCAATTGACTAAAAAGCTCTTCCTTGGATCACTCCGGGAAGCCGAGGTTGAGAGGCTTAATGAGCAGTCGTGGCGGGAAGTCATGGAAATCCTCTTTGCCATCACTATTTTCAGGCAGGACTTTTCGGTCTCATTTCTTGCTATGGTTACAGCTCTGTTGTTAATCAAGGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAGTACATCGAGACTACTCCGTCCGTGCCCATGCTGTCTCATGTTCGGATTGTCTCCTTTTTGGGTTTCTTGCTTGTTCTAGATAGTCTCTTTTTGTACAGTTCTATTAGCAACTTGATAAGGACACAAAAGGCCTCGGTTTCCCTCTTTTTTTCGTTCGAGTACATGATACTAGCAACAACAACAGTGTCAACATTTGTGAAATATGTTTTCTATGTTACTGACATGCTTATGGAGGGACAATGGGAGAAGAAGCCTGTCTACACGTTCTACTTGGAACTTATTCGGGACTTGCTTCACTTGTCTCTGTATTTGTGCTTCTTCCTCGTGATTTTCACGTACTATGGTGTGCCATTGCACTTGATACGTGAGCTCTATGAAACATTTAGGAACTTTAAGATTCGCATTGCTGATTATATTCGTTATCGAAAGCTCACATCAAACATGAATGATCGATTCCCAGATGCTACGCCTGAAGAACTTAATGCAAGTGATGCAACTTGTATCATTTGCCGTGAAGAGATGACAACAGCCAAGAAACTATTATGTGGACACCTTTTTCATGTCGCTTGCCTACGATCATGGTTAGAGCGACAGCATACCTGCCCTACTTGCAGAGCCCTAGTTGTACCTCCTGACAGTGGGACAGGTACAGCTGGACATAGGGGTTCACAGTCAGATGTTCATCAACAGGGGACAGGCACAACGGCTCAGGGTGGTGGAGTTGCGGGTGATAATGTGAGCCAACATGAAGCCAGGCTCCGAGCTGCTGCTGCTGCTGCATCAATATATGAGAAGTCTTATGTATATCCTTCTGCAAACAGACTAGTATGGTCTCCTGGATATACGGCGATTCCTCAGGTTCAAAGACATACGGCTGACTCCTCTAATACTGAATCTGGTGGAGAATCTTCTATTGGACAATCACAGCCACAACTTGCAGCCCAAGGTGGAGCTGCAAACTTGTCCTTCTCTCAGTTTCCACCTTACATGTTTGTCCCCGGAGCCAACTTGGCCTATGGGGAGAGGTTGGGCAGCGATCCAAATCTGACAGCTTCTCCGCTGGAGGCCCAGAAAAAGCTTCTTCAGCACCGGATTGAGATCCTGCAGAATCAGCTTCAAGTTTTACAGAAACCAAAACCAAAGGAAAGTGTGGACATGGGCCCAACAATGGCATCTTTGGATGGCAAAGGAAAGAGTATCGCGGCTTCTTCATCTGTTTCGGACTGTGGACGTCATGAAGATCGGGTCGATTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000153 GO:0000209 GO:0000835 GO:0000836 GO:0002020 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030433 GO:0030968 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034620 GO:0034645 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044322 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070085 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071944 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1902494 GO:1990234 GO:1990381
KEGG Pathways
Metabolic & Signaling
ko04120 ko04141 map04120 map04141
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

544

Amino Acids

60.69

Weight (kDa)

8.43

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_SYVN1_N PF25563 3 - 272 1.8e-108 E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-rbx1 PF12678 287 - 330 8.2e-09 RING-H2 zinc finger domain
zf-RING_2 PF13639 291 - 330 8e-11 Ring finger domain
zf-C3HC4 PF00097 292 - 329 7.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 292 - 327 1.3e-06 RING-type zinc-finger
zf-C3HC4_2 PF13923 292 - 329 3.2e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 299, 391
AatII GACGTC 2 cut(s) 116, 1609
Acc36I ACCTGC 1 cut(s) 983
AccI GTMKAC 2 cut(s) 110, 633
AccII CGCG 1 cut(s) 1577
AciI CCGC 5 cut(s) 24, 247, 1100, 1433, 1577
AclWI GGATC 3 cut(s) 208, 1406, 1468
AcuI CTGAAG 2 cut(s) 867, 1442
AcyI GRCGYC 2 cut(s) 113, 1606
AfaI GTAC 7 cut(s) 166, 377, 470, 536, 713, 1002, 1024
AfiI CCNNNNNNNGG 3 cut(s) 24, 1013, 1543
AflIII ACRYGT 2 cut(s) 636, 1362
AgsI TTSAA 2 cut(s) 1238, 1493
AhlI ACTAGT 1 cut(s) 1198
AjnI CCWGG 2 cut(s) 1127, 1210
AjuI GAANNNNNNNTTGG 4 cut(s) 110, 142, 1272, 1304
Alw21I GWGCWC 1 cut(s) 747
Alw26I GTCTC 7 cut(s) 307, 377, 414, 430, 464, 681, 1212
AlwI GGATC 3 cut(s) 208, 1406, 1468
AoxI GGCC 5 cut(s) 79, 504, 1386, 1440, 1534
ApaI GGGCCC 1 cut(s) 1538
ApeKI GCWGC 9 cut(s) 10, 1139, 1142, 1145, 1148, 1151, 1313, 1328, 1407
Asp700I GAANNNNTTC 1 cut(s) 654
AspS9I GGNCC 3 cut(s) 1441, 1534, 1535
AsuC2I CCSGG 2 cut(s) 209, 1374
AsuHPI GGTGA 1 cut(s) 1115
AxyI CCTNAGG 1 cut(s) 1230
BaeGI GKGCMC 2 cut(s) 402, 1538
BanII GRGCYC 3 cut(s) 747, 994, 1538
BarI GAAGNNNNNNTAC 6 cut(s) 617, 649, 674, 706, 1564, 1596
BauI CACGAG 1 cut(s) 698
Bbv12I GWGCWC 1 cut(s) 747
BbvI GCAGC 8 cut(s) 1126, 1129, 1132, 1135, 1138, 1315, 1325, 1419
BccI CCATC 2 cut(s) 281, 1550
BceAI ACGGC 4 cut(s) 870, 1095, 1236, 1263
BciT130I CCWGG 2 cut(s) 1129, 1212
BcnI CCSGG 2 cut(s) 209, 1374
BcoDI GTCTC 7 cut(s) 307, 377, 414, 430, 464, 681, 1212
BcuI ACTAGT 1 cut(s) 1198
BfaI CTAG 5 cut(s) 47, 452, 545, 995, 1199
BfmI CTRYAG 1 cut(s) 1478
BfuAI ACCTGC 1 cut(s) 983
BglI GCCNNNNNGGC 1 cut(s) 1385
Bme1390I CCNGG 4 cut(s) 209, 1129, 1212, 1374
BmgT120I GGNCC 3 cut(s) 1441, 1534, 1535
BmiI GGNNCC 3 cut(s) 1133, 1378, 1536
BmrFI CCNGG 4 cut(s) 209, 1129, 1212, 1374
BmsI GCATC 4 cut(s) 826, 856, 1163, 1556
BpmI CTGGAG 1 cut(s) 1457
Bpu10I CCTNAGC 1 cut(s) 1083
BpuMI CCSGG 2 cut(s) 209, 1374
Bsa29I ATCGAT 1 cut(s) 826
BsaAI YACGTR 2 cut(s) 711, 740
BsaBI GATNNNNATC 3 cut(s) 1056, 1416, 1472
BsaHI GRCGYC 2 cut(s) 113, 1606
BsaI GGTCTC 2 cut(s) 307, 1212
BsaJI CCNNGG 5 cut(s) 196, 216, 507, 1318, 1372
BsaWI WCCGGW 1 cut(s) 1464
BsaXI ACNNNNNCTCC 2 cut(s) 1414, 1444
Bsc4I CCNNNNNNNGG 3 cut(s) 24, 1013, 1543
Bse1I ACTGG 1 cut(s) 82
Bse21I CCTNAGG 1 cut(s) 1230
Bse3DI GCAATG 3 cut(s) 102, 725, 777
Bse8I GATNNNNATC 3 cut(s) 1056, 1416, 1472
BseBI CCWGG 2 cut(s) 1129, 1212
BseCI ATCGAT 1 cut(s) 826
BseDI CCNNGG 5 cut(s) 196, 216, 507, 1318, 1372
BseGI GGATG 1 cut(s) 1561
BseJI GATNNNNATC 3 cut(s) 1056, 1416, 1472
BseLI CCNNNNNNNGG 3 cut(s) 24, 1013, 1543
BseMI GCAATG 3 cut(s) 102, 725, 777
BseMII CTCAG 4 cut(s) 374, 1097, 1244, 1361
BseNI ACTGG 1 cut(s) 82
BseRI GAGGAG 1 cut(s) 1246
BseSI GKGCMC 2 cut(s) 402, 1538
BseXI GCAGC 8 cut(s) 1126, 1129, 1132, 1135, 1138, 1315, 1325, 1419
Bsh1236I CGCG 1 cut(s) 1577
BshFI GGCC 5 cut(s) 81, 506, 1388, 1442, 1536
BshVI ATCGAT 1 cut(s) 826
BsiHKAI GWGCWC 1 cut(s) 747
BsiSI CCGG 4 cut(s) 92, 208, 1374, 1465
BslFI GGGAC 5 cut(s) 624, 674, 1030, 1081, 1355
BslI CCNNNNNNNGG 3 cut(s) 24, 1013, 1543
BsmAI GTCTC 7 cut(s) 307, 377, 414, 430, 464, 681, 1212
BsmFI GGGAC 5 cut(s) 624, 674, 1030, 1081, 1355
BsnI GGCC 5 cut(s) 81, 506, 1388, 1442, 1536
Bso31I GGTCTC 2 cut(s) 307, 1212
Bsp120I GGGCCC 1 cut(s) 1534
Bsp1286I GDGCHC 4 cut(s) 402, 747, 994, 1538
Bsp1407I TGTACA 1 cut(s) 468
Bsp143I GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
BspACI CCGC 5 cut(s) 24, 247, 1100, 1433, 1577
BspANI GGCC 5 cut(s) 81, 506, 1388, 1442, 1536
BspCNI CTCAG 4 cut(s) 373, 1096, 1243, 1360
BspDI ATCGAT 1 cut(s) 826
BspFNI CGCG 1 cut(s) 1577
BspHI TCATGA 1 cut(s) 1609
BspLI GGNNCC 3 cut(s) 1133, 1378, 1536
BspMAI CTGCAG 1 cut(s) 1482
BspMI ACCTGC 1 cut(s) 983
BspPI GGATC 3 cut(s) 208, 1406, 1468
BspQI GCTCTTC 1 cut(s) 197
BspTNI GGTCTC 2 cut(s) 307, 1212
BsrDI GCAATG 3 cut(s) 102, 725, 777
BsrGI TGTACA 1 cut(s) 468
BsrI ACTGG 1 cut(s) 82
BssECI CCNNGG 5 cut(s) 196, 216, 507, 1318, 1372
BssMI GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
BssNI GRCGYC 2 cut(s) 113, 1606
BssSI CACGAG 1 cut(s) 698
BssT1I CCWWGG 2 cut(s) 196, 1318
Bst2BI CACGAG 1 cut(s) 698
Bst2UI CCWGG 2 cut(s) 1129, 1212
Bst4CI ACNGT 5 cut(s) 473, 559, 1013, 1047, 1601
Bst6I CTCTTC 3 cut(s) 197, 359, 885
BstACI GRCGYC 2 cut(s) 113, 1606
BstAPI GCANNNNNTGC 1 cut(s) 866
BstAUI TGTACA 1 cut(s) 468
BstBAI YACGTR 2 cut(s) 711, 740
BstC8I GCNNGC 1 cut(s) 943
BstDEI CTNAG 4 cut(s) 360, 1083, 1230, 1347
BstF5I GGATG 1 cut(s) 1561
BstFNI CGCG 1 cut(s) 1577
BstKTI GATC 7 cut(s) 123, 203, 826, 953, 1414, 1476, 1618
BstMAI GTCTC 7 cut(s) 307, 377, 414, 430, 464, 681, 1212
BstMBI GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
BstNI CCWGG 2 cut(s) 1129, 1212
BstNSI RCATGY 2 cut(s) 601, 1366
BstSCI CCNGG 4 cut(s) 207, 1127, 1210, 1372
BstSFI CTRYAG 1 cut(s) 1478
BstSLI GKGCMC 2 cut(s) 402, 1538
BstUI CGCG 1 cut(s) 1577
BstV1I GCAGC 8 cut(s) 1126, 1129, 1132, 1135, 1138, 1315, 1325, 1419
BstX2I RGATCY 1 cut(s) 1473
BstYI RGATCY 1 cut(s) 1473
Bsu15I ATCGAT 1 cut(s) 826
Bsu36I CCTNAGG 1 cut(s) 1230
BsuRI GGCC 5 cut(s) 81, 506, 1388, 1442, 1536
BsuTUI ATCGAT 1 cut(s) 826
BtsCI GGATG 1 cut(s) 1561
BtsIMutI CAGTG 2 cut(s) 564, 1018
BveI ACCTGC 1 cut(s) 983
Cac8I GCNNGC 1 cut(s) 943
CciI TCATGA 1 cut(s) 1609
Cfr13I GGNCC 3 cut(s) 1441, 1534, 1535
ClaI ATCGAT 1 cut(s) 826
Csp6I GTAC 7 cut(s) 165, 376, 469, 535, 712, 1001, 1023
CviQI GTAC 7 cut(s) 165, 376, 469, 535, 712, 1001, 1023
DdeI CTNAG 4 cut(s) 360, 1083, 1230, 1347
DpnI GATC 7 cut(s) 122, 202, 825, 952, 1413, 1475, 1617
DpnII GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
DrdI GACNNNNNNGTC 2 cut(s) 299, 391
DseDI GACNNNNNNGTC 2 cut(s) 299, 391
Eam1104I CTCTTC 3 cut(s) 197, 359, 885
EarI CTCTTC 3 cut(s) 197, 359, 885
Ecl136II GAGCTC 1 cut(s) 745
Eco130I CCWWGG 2 cut(s) 196, 1318
Eco147I AGGCCT 1 cut(s) 506
Eco24I GRGCYC 3 cut(s) 747, 994, 1538
Eco31I GGTCTC 2 cut(s) 307, 1212
Eco53kI GAGCTC 1 cut(s) 745
Eco57I CTGAAG 2 cut(s) 867, 1442
Eco81I CCTNAGG 1 cut(s) 1230
EcoICRI GAGCTC 1 cut(s) 745
EcoRII CCWGG 2 cut(s) 1127, 1210
EcoT14I CCWWGG 2 cut(s) 196, 1318
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 3 cut(s) 747, 994, 1538
ErhI CCWWGG 2 cut(s) 196, 1318
FalI AAGNNNNNCTT 2 cut(s) 110, 142
FaqI GGGAC 5 cut(s) 624, 674, 1030, 1081, 1355
FauI CCCGC 3 cut(s) 17, 240, 1093
FblI GTMKAC 2 cut(s) 110, 633
FokI GGATG 1 cut(s) 1568
FriOI GRGCYC 3 cut(s) 747, 994, 1538
FspBI CTAG 5 cut(s) 47, 452, 545, 995, 1199
GsuI CTGGAG 1 cut(s) 1457
HaeIII GGCC 5 cut(s) 81, 506, 1388, 1442, 1536
HapII CCGG 4 cut(s) 92, 208, 1374, 1465
Hin1I GRCGYC 2 cut(s) 113, 1606
HincII GTYRAC 2 cut(s) 111, 564
HindII GTYRAC 2 cut(s) 111, 564
HindIII AAGCTT 1 cut(s) 1451
HinfI GANTC 8 cut(s) 772, 828, 1225, 1253, 1268, 1280, 1483, 1625
HpaII CCGG 4 cut(s) 92, 208, 1374, 1465
HphI GGTGA 1 cut(s) 1115
Hpy166II GTNNAC 8 cut(s) 111, 165, 564, 634, 923, 1043, 1528, 1604
Hpy188I TCNGA 6 cut(s) 363, 420, 1051, 1136, 1422, 1597
Hpy188III TCNNGA 6 cut(s) 382, 452, 659, 700, 1007, 1610
Hpy8I GTNNAC 8 cut(s) 111, 165, 564, 634, 923, 1043, 1528, 1604
Hpy99I CGWCG 2 cut(s) 115, 118
HpyAV CCTTC 2 cut(s) 1194, 1351
HpyCH4III ACNGT 5 cut(s) 473, 559, 1013, 1047, 1601
HpyCH4IV ACGT 5 cut(s) 113, 638, 710, 739, 1606
HpyF3I CTNAG 4 cut(s) 360, 1083, 1230, 1347
HpySE526I ACGT 5 cut(s) 113, 638, 710, 739, 1606
Hsp92I GRCGYC 2 cut(s) 113, 1606
Kzo9I GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
LguI GCTCTTC 1 cut(s) 197
LmnI GCTCC 3 cut(s) 1137, 1325, 1376
Lsp1109I GCAGC 8 cut(s) 1126, 1129, 1132, 1135, 1138, 1315, 1325, 1419
LweI GCATC 4 cut(s) 826, 856, 1163, 1556
MaeI CTAG 5 cut(s) 47, 452, 545, 995, 1199
MaeII ACGT 5 cut(s) 113, 638, 710, 739, 1606
MaeIII GTNAC 2 cut(s) 319, 589
MalI GATC 7 cut(s) 122, 202, 825, 952, 1413, 1475, 1617
MboI GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
MfeI CAATTG 1 cut(s) 176
MflI RGATCY 1 cut(s) 1473
MhlI GDGCHC 4 cut(s) 402, 747, 994, 1538
MluCI AATT 1 cut(s) 176
MlyI GAGTC 1 cut(s) 1247
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 654
MseI TTAA 4 cut(s) 231, 335, 768, 855
MslI CAYNNNNRTG 1 cut(s) 602
MspA1I CMGCKG 2 cut(s) 1028, 1435
MspI CCGG 4 cut(s) 92, 208, 1374, 1465
MspR9I CCNGG 4 cut(s) 209, 1129, 1212, 1374
MunI CAATTG 1 cut(s) 176
MvaI CCWGG 2 cut(s) 1129, 1212
MvnI CGCG 1 cut(s) 1577
NciI CCSGG 2 cut(s) 209, 1374
NdeII GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
NlaIV GGNNCC 3 cut(s) 1133, 1378, 1536
NmeAIII GCCGAG 1 cut(s) 241
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 2 cut(s) 601, 1366
PagI TCATGA 1 cut(s) 1609
PceI AGGCCT 1 cut(s) 506
PciI ACATGT 1 cut(s) 1362
PciSI GCTCTTC 1 cut(s) 197
PdmI GAANNNNTTC 1 cut(s) 654
PfeI GAWTC 7 cut(s) 772, 828, 1225, 1268, 1280, 1483, 1625
PfoI TCCNGGA 2 cut(s) 207, 1210
PleI GAGTC 1 cut(s) 1247
PpsI GAGTC 1 cut(s) 1247
Ppu21I YACGTR 2 cut(s) 711, 740
PscI ACATGT 1 cut(s) 1362
Psp124BI GAGCTC 1 cut(s) 747
Psp6I CCWGG 2 cut(s) 1127, 1210
PspGI CCWGG 2 cut(s) 1127, 1210
PspN4I GGNNCC 3 cut(s) 1133, 1378, 1536
PspOMI GGGCCC 1 cut(s) 1534
PspPI GGNCC 3 cut(s) 1441, 1534, 1535
PstI CTGCAG 1 cut(s) 1482
PsuI RGATCY 1 cut(s) 1473
PvuII CAGCTG 1 cut(s) 1028
RsaI GTAC 7 cut(s) 166, 377, 470, 536, 713, 1002, 1024
RsaNI GTAC 7 cut(s) 165, 376, 469, 535, 712, 1001, 1023
RseI CAYNNNNRTG 1 cut(s) 602
SacI GAGCTC 1 cut(s) 747
SalI GTCGAC 1 cut(s) 109
SapI GCTCTTC 1 cut(s) 197
SaqAI TTAA 4 cut(s) 231, 335, 768, 855
Sau3AI GATC 7 cut(s) 120, 200, 823, 950, 1411, 1473, 1615
Sau96I GGNCC 3 cut(s) 1441, 1534, 1535
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 4 cut(s) 209, 1129, 1212, 1374
SduI GDGCHC 4 cut(s) 402, 747, 994, 1538
SfaNI GCATC 4 cut(s) 826, 856, 1163, 1556
SfcI CTRYAG 1 cut(s) 1478
SmiMI CAYNNNNRTG 1 cut(s) 602
SpeI ACTAGT 1 cut(s) 1198
Sse9I AATT 1 cut(s) 176
SseBI AGGCCT 1 cut(s) 506
SsiI CCGC 5 cut(s) 24, 247, 1100, 1433, 1577
SspMI CTAG 5 cut(s) 47, 452, 545, 995, 1199
SstI GAGCTC 1 cut(s) 747
StuI AGGCCT 1 cut(s) 506
StyD4I CCNGG 4 cut(s) 207, 1127, 1210, 1372
StyI CCWWGG 2 cut(s) 196, 1318
TaaI ACNGT 5 cut(s) 473, 559, 1013, 1047, 1601
TaiI ACGT 5 cut(s) 116, 641, 713, 742, 1609
TaqI TCGA 7 cut(s) 110, 116, 381, 531, 799, 826, 1623
TaqII GACCGA 1 cut(s) 289
TasI AATT 1 cut(s) 176
TatI WGTACW 4 cut(s) 164, 375, 468, 534
TauI GCSGC 1 cut(s) 1580
TfiI GAWTC 7 cut(s) 772, 828, 1225, 1268, 1280, 1483, 1625
Tru1I TTAA 4 cut(s) 231, 335, 768, 855
Tru9I TTAA 4 cut(s) 231, 335, 768, 855
TscAI CASTG 2 cut(s) 564, 1018
TseI GCWGC 9 cut(s) 10, 1139, 1142, 1145, 1148, 1151, 1313, 1328, 1407
TspDTI ATGAA 8 cut(s) 20, 765, 833, 923, 1046, 1137, 1575, 1626
TspGWI ACGGA 2 cut(s) 381, 385
TspRI CASTG 2 cut(s) 564, 1018
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 2 cut(s) 601, 1366
XmiI GTMKAC 2 cut(s) 110, 633
XmnI GAANNNNTTC 1 cut(s) 654
XspI CTAG 5 cut(s) 47, 452, 545, 995, 1199
ZraI GACGTC 2 cut(s) 114, 1607
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.