Rw1G040260

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0003784
Physical Location & Seq
Forward (+)
67593546 .. 67596924
3379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G040260.1

Sequence Viewer

Length: 1518 bp
ATGGTTTACCTATCGACCTCCAAGATCAGTCTGGTGCTTCTTCTCAACATGGGCCTTGTCATCATGTGTATTTTGTGGCAACTGACTAAGAAGCTATTCCTTGGCTCACTCCGAGAGCCGGAGGTTGAGAGGCTTAACGAGCAGTCGTGGAGGGAAGTCATGGAGATTCTTTTCGCAATCACTATTTTCCGGCAGGACTTTTCGGTGTCGTTTCTGGCTTTTGTCACTGCTCTGTTGCTGATCAAGGCGTTGCATTGGTTGGCGCAGAAGAGGGTTGAGTACATTGAGACTACTCCGTCTGTTCCCACGCTGTCGCATGTTCGGATTGTCTCCTTTTTGGGCTTCTTGTTTGTTGTAGATAGTCTCTTTTTGTATACTTCTGTCAGCACCATCATTACGACTCAGAAGCCTTCGGTTTCCCTCTTTTTTGCATTCGAGTACATGATCCTAGCAACAACAACACTGTCAACATTTGTGAAATATGTTTTCTATGTTAGTGACATGATTATGGAGGGACAATGGGAGAAGAAGCATGTCTACACTTTCTATTTGGAACTTATTCGGGACTTGCTCCACTTATCTATGTATTTGTGCTTCTTCATCGTGATTTTCATGTACTATGGCTTGCCAGTGCACTTGATTCGCGAACTGTATGAGACGTTCAGGAACTTTAAGATTCGTGTTGCTGATTTCCTCCGTTATCGAAAGATCACTTCAAACATGAATGACCGGTTCCCAGATGCTACACCTGAAGAGCTTACCGCAGGTGACGCAACCTGCATCATTTGTCGTGAAGAGATGACAACAGCCAAAAAACTATTGTGTGGACACCTTTTTCATGTGGCTTGCTTGCGATCATGGTTAGAGCGACAACATACCTGCCCTACGTGCCGAGCGCTTGTTGTACCTCCTGATGGTCGGACAGGTACAGCTCGAGGACAAGGTGGATCACGCTCCGATGCTCATCAACAGGGGACAGGCATATCAGGTACAACTGCTCAAGGTTCAACTAGTGGTGGAGGTGCTGGTGATAACATGAGCCATCATGAAGCAAGACTGCAAGCTGCTGCTGCAGCTGCATCAATATATGAGAAATCTTATGTATATCCATCTGCAAACAGACTAGTATGGTCTGCTGGATATGCCGCACTTCCTCTGGTTAATAGACATATGGCTGACTCCCCTAGTACTGATTTACAATCACAACCACTTGCAACCCCTGGTGGACCTGCAAACTTGTCATTGCCTCAACCTTCGCATTACATGTTTTCTCCTTTTCATGGAGCCAATGGGGCGAGGTCGGGCGGCAATACAAATATAACAGCTTCTCAGCTGGAGGCCCAGAGAAAAGTTCTTCAGCACCAGATTGAGATCCTGCAGAATCAGCTCCAAATTTTACAAAAGCCAAAACCCAAGGAAAGTGTGGAAGGGGGTCCAACATTAGCAGATAGCAAAGGAAAGAGTGTTGCACCTTTGTCTGAATCAAATTGCGGGCATCATGAGGATGTTGTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000153 GO:0000209 GO:0000835 GO:0000836 GO:0002020 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030433 GO:0030968 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034620 GO:0034645 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044322 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070085 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071944 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1902494 GO:1990234 GO:1990381
KEGG Pathways
Metabolic & Signaling
ko04120 ko04141 map04120 map04141
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

505

Amino Acids

56.43

Weight (kDa)

8.02

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_SYVN1_N PF25563 1 - 240 7.8e-95 E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-rbx1 PF12678 258 - 298 1.3e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 259 - 298 7.3e-11 Ring finger domain
zf-C3HC4 PF00097 260 - 297 6.5e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 260 - 295 1.2e-06 RING-type zinc-finger
zf-C3HC4_2 PF13923 260 - 297 2.9e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 755
AasI GACNNNNNNGTC 1 cut(s) 295
Acc36I ACCTGC 4 cut(s) 755, 785, 887, 1237
AccI GTMKAC 2 cut(s) 374, 537
AccII CGCG 1 cut(s) 645
AciI CCGC 4 cut(s) 762, 1146, 1305, 1491
AclWI GGATC 3 cut(s) 439, 955, 1366
AcsI RAATTY 1 cut(s) 1392
AcuI CTGAAG 2 cut(s) 771, 1340
AfaI GTAC 7 cut(s) 281, 440, 617, 906, 928, 991, 1189
AfeI AGCGCT 1 cut(s) 897
AfiI CCNNNNNNNGG 3 cut(s) 118, 914, 1280
AflIII ACRYGT 1 cut(s) 1263
AgeI ACCGGT 1 cut(s) 729
AgsI TTSAA 2 cut(s) 717, 1008
AhlI ACTAGT 2 cut(s) 1010, 1123
AjnI CCWGG 1 cut(s) 1219
AluBI AGCT 8 cut(s) 94, 757, 932, 1064, 1076, 1325, 1333, 1387
AluI AGCT 8 cut(s) 94, 757, 932, 1064, 1076, 1325, 1333, 1387
Alw21I GWGCWC 1 cut(s) 636
Alw26I GTCTC 4 cut(s) 281, 334, 368, 650
Alw44I GTGCAC 1 cut(s) 632
AlwI GGATC 3 cut(s) 439, 955, 1366
Ama87I CYCGRG 1 cut(s) 933
Aor51HI AGCGCT 1 cut(s) 897
AoxI GGCC 2 cut(s) 52, 1338
ApaLI GTGCAC 1 cut(s) 632
ApeKI GCWGC 5 cut(s) 1064, 1067, 1070, 1073, 1076
ApoI RAATTY 1 cut(s) 1392
AsiGI ACCGGT 1 cut(s) 729
Asp700I GAANNNNTTC 2 cut(s) 95, 558
AspLEI GCGC 2 cut(s) 265, 898
AspS9I GGNCC 4 cut(s) 52, 1226, 1339, 1433
AsuHPI GGTGA 2 cut(s) 779, 1040
AvaI CYCGRG 1 cut(s) 933
AvaII GGWCC 2 cut(s) 1226, 1433
BaeGI GKGCMC 1 cut(s) 636
BarI GAAGNNNNNNTAC 4 cut(s) 521, 553, 578, 610
Bbv12I GWGCWC 1 cut(s) 636
BbvI GCAGC 5 cut(s) 1051, 1054, 1057, 1063, 1085
BccI CCATC 4 cut(s) 398, 908, 1050, 1117
BcgI CGANNNNNNTGC 2 cut(s) 623, 657
BciT130I CCWGG 1 cut(s) 1221
BclI TGATCA 1 cut(s) 240
BcoDI GTCTC 4 cut(s) 281, 334, 368, 650
BcuI ACTAGT 2 cut(s) 1010, 1123
BfaI CTAG 5 cut(s) 449, 1011, 1124, 1185, 1516
BfmI CTRYAG 2 cut(s) 1071, 1376
BfoI RGCGCY 1 cut(s) 899
BfuAI ACCTGC 4 cut(s) 755, 785, 887, 1237
BglI GCCNNNNNGGC 1 cut(s) 1292
BisI GCNGC 7 cut(s) 1065, 1068, 1071, 1074, 1077, 1146, 1306
BlsI GCNGC 7 cut(s) 1066, 1069, 1072, 1075, 1078, 1147, 1307
BmcAI AGTACT 1 cut(s) 1189
Bme1390I CCNGG 1 cut(s) 1221
Bme18I GGWCC 2 cut(s) 1226, 1433
BmeT110I CYCGRG 1 cut(s) 933
BmgT120I GGNCC 4 cut(s) 52, 1226, 1339, 1433
BmiI GGNNCC 3 cut(s) 734, 1285, 1434
BmrFI CCNGG 1 cut(s) 1221
BmsI GCATC 5 cut(s) 730, 789, 949, 1088, 1504
BpmI CTGGAG 1 cut(s) 1355
BpuEI CTTGAG 1 cut(s) 984
BsaAI YACGTR 1 cut(s) 888
BsaBI GATNNNNATC 2 cut(s) 963, 1370
BsaJI CCNNGG 3 cut(s) 100, 1219, 1413
BsaWI WCCGGW 1 cut(s) 729
Bsc4I CCNNNNNNNGG 3 cut(s) 118, 914, 1280
Bse118I RCCGGY 1 cut(s) 729
Bse1I ACTGG 1 cut(s) 629
Bse3DI GCAATG 1 cut(s) 1241
Bse8I GATNNNNATC 2 cut(s) 963, 1370
BseBI CCWGG 1 cut(s) 1221
BseDI CCNNGG 3 cut(s) 100, 1219, 1413
BseGI GGATG 1 cut(s) 1510
BseJI GATNNNNATC 2 cut(s) 963, 1370
BseLI CCNNNNNNNGG 3 cut(s) 118, 914, 1280
BseMI GCAATG 1 cut(s) 1241
BseMII CTCAG 2 cut(s) 416, 1343
BseNI ACTGG 1 cut(s) 629
BseSI GKGCMC 1 cut(s) 636
BseXI GCAGC 5 cut(s) 1051, 1054, 1057, 1063, 1085
Bsh1236I CGCG 1 cut(s) 645
BshFI GGCC 2 cut(s) 54, 1340
BshTI ACCGGT 1 cut(s) 729
BsiHKAI GWGCWC 1 cut(s) 636
BsiHKCI CYCGRG 1 cut(s) 933
BsiSI CCGG 3 cut(s) 119, 190, 730
BslFI GGGAC 3 cut(s) 528, 578, 988
BslI CCNNNNNNNGG 3 cut(s) 118, 914, 1280
BsmAI GTCTC 4 cut(s) 281, 334, 368, 650
BsmBI CGTCTC 1 cut(s) 650
BsmFI GGGAC 3 cut(s) 528, 578, 988
BsmI GAATGC 1 cut(s) 431
BsnI GGCC 2 cut(s) 54, 1340
BsoBI CYCGRG 1 cut(s) 933
Bsp1286I GDGCHC 1 cut(s) 636
Bsp143I GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
Bsp68I TCGCGA 1 cut(s) 645
BspACI CCGC 4 cut(s) 762, 1146, 1305, 1491
BspANI GGCC 2 cut(s) 54, 1340
BspCNI CTCAG 2 cut(s) 415, 1342
BspFNI CGCG 1 cut(s) 645
BspHI TCATGA 2 cut(s) 1045, 1498
BspLI GGNNCC 3 cut(s) 734, 1285, 1434
BspMAI CTGCAG 2 cut(s) 1075, 1380
BspMI ACCTGC 4 cut(s) 755, 785, 887, 1237
BspPI GGATC 3 cut(s) 439, 955, 1366
BspQI GCTCTTC 1 cut(s) 747
BsrDI GCAATG 1 cut(s) 1241
BsrFI RCCGGY 1 cut(s) 729
BsrI ACTGG 1 cut(s) 629
BssAI RCCGGY 1 cut(s) 729
BssECI CCNNGG 3 cut(s) 100, 1219, 1413
BssMI GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
BssNAI GTATAC 1 cut(s) 375
BssT1I CCWWGG 2 cut(s) 100, 1413
Bst1107I GTATAC 1 cut(s) 375
Bst2UI CCWGG 1 cut(s) 1221
Bst4CI ACNGT 2 cut(s) 465, 651
Bst6I CTCTTC 3 cut(s) 263, 747, 789
BstBAI YACGTR 1 cut(s) 888
BstC8I GCNNGC 5 cut(s) 626, 847, 851, 1062, 1493
BstDEI CTNAG 3 cut(s) 87, 402, 1329
BstF5I GGATG 1 cut(s) 1510
BstFNI CGCG 1 cut(s) 645
BstH2I RGCGCY 1 cut(s) 899
BstHHI GCGC 2 cut(s) 265, 898
BstKTI GATC 7 cut(s) 27, 243, 447, 711, 857, 950, 1374
BstMAI GTCTC 4 cut(s) 281, 334, 368, 650
BstMBI GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
BstMWI GCNNNNNNNGC 9 cut(s) 139, 770, 888, 1070, 1073, 1076, 1142, 1292, 1384
BstNI CCWGG 1 cut(s) 1221
BstNSI RCATGY 3 cut(s) 320, 536, 1267
BstSCI CCNGG 1 cut(s) 1219
BstSFI CTRYAG 2 cut(s) 1071, 1376
BstSLI GKGCMC 1 cut(s) 636
BstUI CGCG 1 cut(s) 645
BstV1I GCAGC 5 cut(s) 1051, 1054, 1057, 1063, 1085
BstX2I RGATCY 1 cut(s) 1371
BstYI RGATCY 1 cut(s) 1371
BstZ17I GTATAC 1 cut(s) 375
BsuRI GGCC 2 cut(s) 54, 1340
BtsCI GGATG 1 cut(s) 1510
BtsI GCAGTG 1 cut(s) 225
BtsIMutI CAGTG 3 cut(s) 225, 461, 636
BtuMI TCGCGA 1 cut(s) 645
BveI ACCTGC 4 cut(s) 755, 785, 887, 1237
Cac8I GCNNGC 5 cut(s) 626, 847, 851, 1062, 1493
CciI TCATGA 2 cut(s) 1045, 1498
CfoI GCGC 2 cut(s) 265, 898
Cfr10I RCCGGY 1 cut(s) 729
Cfr13I GGNCC 4 cut(s) 52, 1226, 1339, 1433
CseI GACGC 1 cut(s) 779
Csp6I GTAC 7 cut(s) 280, 439, 616, 905, 927, 990, 1188
CspAI ACCGGT 1 cut(s) 729
CviQI GTAC 7 cut(s) 280, 439, 616, 905, 927, 990, 1188
DdeI CTNAG 3 cut(s) 87, 402, 1329
DpnI GATC 7 cut(s) 26, 242, 446, 710, 856, 949, 1373
DpnII GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
DrdI GACNNNNNNGTC 1 cut(s) 295
DseDI GACNNNNNNGTC 1 cut(s) 295
Eam1104I CTCTTC 3 cut(s) 263, 747, 789
EarI CTCTTC 3 cut(s) 263, 747, 789
Eco130I CCWWGG 2 cut(s) 100, 1413
Eco47I GGWCC 2 cut(s) 1226, 1433
Eco47III AGCGCT 1 cut(s) 897
Eco57I CTGAAG 2 cut(s) 771, 1340
Eco88I CYCGRG 1 cut(s) 933
EcoRII CCWGG 1 cut(s) 1219
EcoT14I CCWWGG 2 cut(s) 100, 1413
ErhI CCWWGG 2 cut(s) 100, 1413
Esp3I CGTCTC 1 cut(s) 650
FaqI GGGAC 3 cut(s) 528, 578, 988
FauI CCCGC 1 cut(s) 1484
FauNDI CATATG 1 cut(s) 1170
FbaI TGATCA 1 cut(s) 240
FblI GTMKAC 2 cut(s) 374, 537
Fnu4HI GCNGC 7 cut(s) 1065, 1068, 1071, 1074, 1077, 1146, 1306
Fsp4HI GCNGC 7 cut(s) 1065, 1068, 1071, 1074, 1077, 1146, 1306
FspBI CTAG 5 cut(s) 449, 1011, 1124, 1185, 1516
GlaI GCGC 2 cut(s) 264, 897
GluI GCNGC 7 cut(s) 1065, 1068, 1071, 1074, 1077, 1146, 1306
GsuI CTGGAG 1 cut(s) 1355
HaeII RGCGCY 1 cut(s) 899
HaeIII GGCC 2 cut(s) 54, 1340
HapII CCGG 3 cut(s) 119, 190, 730
HgaI GACGC 1 cut(s) 779
HhaI GCGC 2 cut(s) 265, 898
Hin6I GCGC 2 cut(s) 263, 896
HinP1I GCGC 2 cut(s) 263, 896
HincII GTYRAC 2 cut(s) 468, 1513
HindII GTYRAC 2 cut(s) 468, 1513
HinfI GANTC 7 cut(s) 166, 400, 640, 676, 1178, 1381, 1481
HpaII CCGG 3 cut(s) 119, 190, 730
HphI GGTGA 2 cut(s) 779, 1040
Hpy166II GTNNAC 8 cut(s) 7, 375, 468, 538, 634, 827, 1226, 1513
Hpy188I TCNGA 6 cut(s) 113, 324, 405, 921, 958, 1480
Hpy188III TCNNGA 8 cut(s) 563, 604, 644, 664, 791, 911, 1046, 1499
Hpy8I GTNNAC 8 cut(s) 7, 375, 468, 538, 634, 827, 1226, 1513
HpyAV CCTTC 3 cut(s) 420, 1263, 1421
HpyCH4III ACNGT 2 cut(s) 465, 651
HpyCH4IV ACGT 2 cut(s) 659, 887
HpyF10VI GCNNNNNNNGC 9 cut(s) 139, 770, 888, 1070, 1073, 1076, 1142, 1292, 1384
HpyF3I CTNAG 3 cut(s) 87, 402, 1329
HpySE526I ACGT 2 cut(s) 659, 887
HspAI GCGC 2 cut(s) 263, 896
Ksp22I TGATCA 1 cut(s) 240
Kzo9I GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
LguI GCTCTTC 1 cut(s) 747
LmnI GCTCC 4 cut(s) 576, 959, 1283, 1392
Lsp1109I GCAGC 5 cut(s) 1051, 1054, 1057, 1063, 1085
LweI GCATC 5 cut(s) 730, 789, 949, 1088, 1504
MaeI CTAG 5 cut(s) 449, 1011, 1124, 1185, 1516
MaeII ACGT 2 cut(s) 659, 887
MaeIII GTNAC 3 cut(s) 223, 497, 767
MalI GATC 7 cut(s) 26, 242, 446, 710, 856, 949, 1373
MboI GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
MboII GAAGA 7 cut(s) 32, 280, 538, 589, 764, 806, 1346
MflI RGATCY 1 cut(s) 1371
MhlI GDGCHC 1 cut(s) 636
MluCI AATT 2 cut(s) 1392, 1486
MlyI GAGTC 2 cut(s) 394, 1172
MmeI TCCRAC 2 cut(s) 899, 1460
MroXI GAANNNNTTC 2 cut(s) 95, 558
MseI TTAA 3 cut(s) 135, 672, 1161
MslI CAYNNNNRTG 2 cut(s) 506, 1503
MspA1I CMGCKG 2 cut(s) 1076, 1333
MspI CCGG 3 cut(s) 119, 190, 730
MspR9I CCNGG 1 cut(s) 1221
Mva1269I GAATGC 1 cut(s) 431
MvaI CCWGG 1 cut(s) 1221
MvnI CGCG 1 cut(s) 645
MwoI GCNNNNNNNGC 9 cut(s) 139, 770, 888, 1070, 1073, 1076, 1142, 1292, 1384
NdeI CATATG 1 cut(s) 1170
NdeII GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
NlaIV GGNNCC 3 cut(s) 734, 1285, 1434
NmeAIII GCCGAG 1 cut(s) 917
NmuCI GTSAC 3 cut(s) 223, 497, 767
NruI TCGCGA 1 cut(s) 645
NspI RCATGY 3 cut(s) 320, 536, 1267
PaeR7I CTCGAG 1 cut(s) 933
PagI TCATGA 2 cut(s) 1045, 1498
PaqCI CACCTGC 1 cut(s) 755
PciI ACATGT 1 cut(s) 1263
PciSI GCTCTTC 1 cut(s) 747
PctI GAATGC 1 cut(s) 431
PdmI GAANNNNTTC 2 cut(s) 95, 558
PfeI GAWTC 5 cut(s) 166, 640, 676, 1381, 1481
PinAI ACCGGT 1 cut(s) 729
PkrI GCNGC 7 cut(s) 1066, 1069, 1072, 1075, 1078, 1147, 1307
PleI GAGTC 2 cut(s) 394, 1172
PpsI GAGTC 2 cut(s) 394, 1172
Ppu21I YACGTR 1 cut(s) 888
PscI ACATGT 1 cut(s) 1263
Psp6I CCWGG 1 cut(s) 1219
PspGI CCWGG 1 cut(s) 1219
PspN4I GGNNCC 3 cut(s) 734, 1285, 1434
PspPI GGNCC 4 cut(s) 52, 1226, 1339, 1433
PspXI VCTCGAGB 1 cut(s) 933
PsrI GAACNNNNNNTAC 2 cut(s) 644, 676
PstI CTGCAG 2 cut(s) 1075, 1380
PsuI RGATCY 1 cut(s) 1371
PvuII CAGCTG 2 cut(s) 1076, 1333
RruI TCGCGA 1 cut(s) 645
RsaI GTAC 7 cut(s) 281, 440, 617, 906, 928, 991, 1189
RsaNI GTAC 7 cut(s) 280, 439, 616, 905, 927, 990, 1188
RseI CAYNNNNRTG 2 cut(s) 506, 1503
SapI GCTCTTC 1 cut(s) 747
SaqAI TTAA 3 cut(s) 135, 672, 1161
SatI GCNGC 7 cut(s) 1065, 1068, 1071, 1074, 1077, 1146, 1306
Sau3AI GATC 7 cut(s) 24, 240, 444, 708, 854, 947, 1371
Sau96I GGNCC 4 cut(s) 52, 1226, 1339, 1433
ScaI AGTACT 1 cut(s) 1189
SchI GAGTC 2 cut(s) 394, 1172
ScrFI CCNGG 1 cut(s) 1221
SduI GDGCHC 1 cut(s) 636
SfaNI GCATC 5 cut(s) 730, 789, 949, 1088, 1504
SfcI CTRYAG 2 cut(s) 1071, 1376
Sfr274I CTCGAG 1 cut(s) 933
SinI GGWCC 2 cut(s) 1226, 1433
SlaI CTCGAG 1 cut(s) 933
SmiMI CAYNNNNRTG 2 cut(s) 506, 1503
SmlI CTYRAG 2 cut(s) 933, 999
SmoI CTYRAG 2 cut(s) 933, 999
SpeI ACTAGT 2 cut(s) 1010, 1123
Sse9I AATT 2 cut(s) 1392, 1486
SsiI CCGC 4 cut(s) 762, 1146, 1305, 1491
SspMI CTAG 5 cut(s) 449, 1011, 1124, 1185, 1516
StyD4I CCNGG 1 cut(s) 1219
StyI CCWWGG 2 cut(s) 100, 1413
TaaI ACNGT 2 cut(s) 465, 651
TaiI ACGT 2 cut(s) 662, 890
TaqI TCGA 4 cut(s) 14, 435, 703, 934
TasI AATT 2 cut(s) 1392, 1486
TatI WGTACW 4 cut(s) 279, 438, 615, 1187
TauI GCSGC 2 cut(s) 1148, 1308
TfiI GAWTC 5 cut(s) 166, 640, 676, 1381, 1481
Tru1I TTAA 3 cut(s) 135, 672, 1161
Tru9I TTAA 3 cut(s) 135, 672, 1161
TscAI CASTG 3 cut(s) 232, 468, 636
TseFI GTSAC 3 cut(s) 223, 497, 767
TseI GCWGC 5 cut(s) 1064, 1067, 1070, 1073, 1076
Tsp45I GTSAC 3 cut(s) 223, 497, 767
TspDTI ATGAA 6 cut(s) 589, 601, 737, 827, 1062, 1268
TspGWI ACGGA 2 cut(s) 285, 686
TspRI CASTG 3 cut(s) 232, 468, 636
VneI GTGCAC 1 cut(s) 632
VpaK11BI GGWCC 2 cut(s) 1226, 1433
XapI RAATTY 1 cut(s) 1392
XceI RCATGY 3 cut(s) 320, 536, 1267
XcmI CCANNNNNNNNNTGG 2 cut(s) 28, 1420
XhoI CTCGAG 1 cut(s) 933
XmiI GTMKAC 2 cut(s) 374, 537
XmnI GAANNNNTTC 2 cut(s) 95, 558
XspI CTAG 5 cut(s) 449, 1011, 1124, 1185, 1516
ZrmI AGTACT 1 cut(s) 1189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.