Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005139.1

Orthogroup ID

OG0003784

Physical Location & Seq

Genomic Coordinates Forward (+)

75463 .. 78965

Gene Structure 3503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005139.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

atgatgaggctgcaaacttacgcggggcttagcttggtaggaaccctagcgattatttaccatgcatttagcagcagaggccagttttaccccgccatggtttacctatcgacctccaagatcagtctggtgcttcttctcaacatgggcctagtcatcatgtgtattttgtggcaactgactaagaagctattcctcggctcactccgagagccggaggttgagaggcttaatgagcagtcgtggagggaagtcatggagattcttttcgcaatcactattttccggcaggacttttcggtgtcgtttctggcttttgtcgctgctctgttgctgatcaaggcgttgcattggttggcgcagaagagggttgagtacattgagactactccgtctgttcccacgctgtcgcatgttcggattgtctcctttttgggcttcttgtttgttgtagatactctctttttgtatacttctgtcagcaccatcattacgactcagaagccttcggtttccctcttttttgcattcgagtacatgatcctagcaacaacaacactgtcaacatttgtgaaatatgttttctatgttagtgacatgattatggagggacaatgggagaagaagcatgtctacactttctatttggaacttattcgggacttgctccacttatctatgtatttgtgcttcttcatcgtgattttcatgtactatggcttgccagtgcacttgattcgcgaactgtatgagacgttcaggaactttaagattcgtgttgctgatttcctccgttatcgaaagatcacttcaaacatgaatgaccggttcccagatgctacacctgaagagcttaccgcaggtgacgcaacctgcatcatttgtcgtgaagagatgacaacagccaaaaaactattgtgtggacacctttttcatgtggcttgcttgcgatcatggttagagcgacaacatacctgccctacgtgccgagcgcttgttgtacctcctgatggtcggacaggtacagctcgaggacaaggtggatcacgctccgatgctcatcaacaggggacaggcatatcaggtacaactgctcaaggttcaactagtggtggaggtgctggtgataacatgagccatcatgaagcaagactgcaagctgctgctgcagctgcatcaatatatgagaaatcttatgtatatccatctgcaaacagactagtatggtctgctggatatgccgcacttccactggttaatagacatatggctgactcccctagtactgatttacaatcacaaccacttgcaacccctggtggacctgcaaacttgtcattgcctcaacctccgcattacatgttttctccttttcatggagccaatggggagaggtcgggcggcaatacaaatataacagcttctcagctggaggcccagagaaaagttcttcagcaccagattgagatcctgcagaatcagctccaaattttacaaaagccaaaacccaaggaaagtgtggaagggggtccaacattagcagatagcaaaggaaagagtgttgcacctttgtctgaatcaaattgcgggcatcatgaggatgttgttgactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000153 GO:0000209 GO:0000835 GO:0000836 GO:0002020 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030433 GO:0030968 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034620 GO:0034645 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044322 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070085 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071944 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1902494 GO:1990234 GO:1990381

KEGG Pathways

Metabolic & Signaling

ko04120 ko04141 map04120 map04141

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

537

Amino Acids

60.02

Weight (kDa)

8.27

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65040 AT1G65040 AT1G65040 AT1G65040 AT1G65040 AT1G65040
fragaria_vesca	FvH4_7g33880 FvH4_7g33880 FvH4_7g33880
malus_domestica	MD01G1235000.v1.1 MD01G1235300.v1.1 MD07G1307700.v1.1 MD07G1308100.v1.1
prunus_persica	Prupe.2G325300_v2.0.a1 Prupe.2G325300_v2.0.a1 Prupe.6G242100_v2.0.a1
pyrus_communis	pycom01g24310 pycom01g24350 pycom07g28030 pycom17g03700
rosa_chinensis	RchiOBHm_Chr1g0384051 RchiOBHm_Chr1g0384071 RchiOBHm_Chr1g0384081
rosa_laevigata	RLG00000026074
rosa_multiflora	Rmu_sc0005139.1_g000019
rosa_roxburghii	Rroxscaffold_4G00277010
rosa_rugosa	Rorug01G0444600 Rorug01G0444700
rosa_samantha	Rh1AG469900 Rh1AG470000 Rh1BG427500 Rh1CG440200 Rh1DG460500
rosa_wichuraiana	Rw1G040260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	851
AasI	GACNNNNNNGTC	1 cut(s)	391
Acc36I	ACCTGC	4 cut(s)	851, 881, 983, 1333
AccI	GTMKAC	2 cut(s)	470, 633
AccII	CGCG	2 cut(s)	23, 741
AciI	CCGC	7 cut(s)	23, 93, 858, 1242, 1352, 1401, 1587
AclWI	GGATC	3 cut(s)	535, 1051, 1462
AcsI	RAATTY	1 cut(s)	1488
AcuI	CTGAAG	2 cut(s)	867, 1436
AfaI	GTAC	7 cut(s)	377, 536, 713, 1002, 1024, 1087, 1285
AfeI	AGCGCT	1 cut(s)	993
AfiI	CCNNNNNNNGG	4 cut(s)	97, 214, 1010, 1376
AflIII	ACRYGT	1 cut(s)	1359
AgeI	ACCGGT	1 cut(s)	825
AgsI	TTSAA	2 cut(s)	813, 1104
AhlI	ACTAGT	2 cut(s)	1106, 1219
AjnI	CCWGG	1 cut(s)	1315
AluBI	AGCT	9 cut(s)	33, 190, 853, 1028, 1160, 1172, 1421, 1429, 1483
AluI	AGCT	9 cut(s)	33, 190, 853, 1028, 1160, 1172, 1421, 1429, 1483
Alw21I	GWGCWC	1 cut(s)	732
Alw26I	GTCTC	3 cut(s)	377, 430, 746
Alw44I	GTGCAC	1 cut(s)	728
AlwI	GGATC	3 cut(s)	535, 1051, 1462
Ama87I	CYCGRG	1 cut(s)	1029
Aor51HI	AGCGCT	1 cut(s)	993
AoxI	GGCC	3 cut(s)	79, 148, 1434
ApaLI	GTGCAC	1 cut(s)	728
ApeKI	GCWGC	8 cut(s)	10, 72, 323, 1160, 1163, 1166, 1169, 1172
ApoI	RAATTY	1 cut(s)	1488
AsiGI	ACCGGT	1 cut(s)	825
Asp700I	GAANNNNTTC	2 cut(s)	191, 654
AspLEI	GCGC	2 cut(s)	361, 994
AspS9I	GGNCC	4 cut(s)	148, 1322, 1435, 1529
AsuHPI	GGTGA	2 cut(s)	875, 1136
AvaI	CYCGRG	1 cut(s)	1029
AvaII	GGWCC	2 cut(s)	1322, 1529
BaeGI	GKGCMC	1 cut(s)	732
BarI	GAAGNNNNNNTAC	4 cut(s)	617, 649, 674, 706
Bbv12I	GWGCWC	1 cut(s)	732
BbvI	GCAGC	7 cut(s)	84, 310, 1147, 1150, 1153, 1159, 1181
BccI	CCATC	4 cut(s)	494, 1004, 1146, 1213
BcgI	CGANNNNNNTGC	2 cut(s)	719, 753
BciT130I	CCWGG	1 cut(s)	1317
BclI	TGATCA	1 cut(s)	336
BcoDI	GTCTC	3 cut(s)	377, 430, 746
BcuI	ACTAGT	2 cut(s)	1106, 1219
BfaI	CTAG	7 cut(s)	47, 152, 545, 1107, 1220, 1281, 1612
BfmI	CTRYAG	2 cut(s)	1167, 1472
BfoI	RGCGCY	1 cut(s)	995
BfuAI	ACCTGC	4 cut(s)	851, 881, 983, 1333
BlpI	GCTNAGC	1 cut(s)	29
BmcAI	AGTACT	1 cut(s)	1285
Bme1390I	CCNGG	1 cut(s)	1317
Bme18I	GGWCC	2 cut(s)	1322, 1529
BmeT110I	CYCGRG	1 cut(s)	1029
BmgT120I	GGNCC	4 cut(s)	148, 1322, 1435, 1529
BmiI	GGNNCC	4 cut(s)	43, 830, 1381, 1530
BmrFI	CCNGG	1 cut(s)	1317
BmsI	GCATC	5 cut(s)	826, 885, 1045, 1184, 1600
BpmI	CTGGAG	1 cut(s)	1451
Bpu1102I	GCTNAGC	1 cut(s)	29
BpuEI	CTTGAG	1 cut(s)	1080
BsaAI	YACGTR	1 cut(s)	984
BsaBI	GATNNNNATC	2 cut(s)	1059, 1466
BsaJI	CCNNGG	4 cut(s)	96, 196, 1315, 1509
BsaWI	WCCGGW	1 cut(s)	825
Bsc4I	CCNNNNNNNGG	4 cut(s)	97, 214, 1010, 1376
Bse118I	RCCGGY	1 cut(s)	825
Bse1I	ACTGG	3 cut(s)	82, 725, 1257
Bse3DI	GCAATG	1 cut(s)	1337
Bse8I	GATNNNNATC	2 cut(s)	1059, 1466
BseBI	CCWGG	1 cut(s)	1317
BseDI	CCNNGG	4 cut(s)	96, 196, 1315, 1509
BseGI	GGATG	1 cut(s)	1606
BseJI	GATNNNNATC	2 cut(s)	1059, 1466
BseLI	CCNNNNNNNGG	4 cut(s)	97, 214, 1010, 1376
BseMI	GCAATG	1 cut(s)	1337
BseMII	CTCAG	2 cut(s)	512, 1439
BseNI	ACTGG	3 cut(s)	82, 725, 1257
BseSI	GKGCMC	1 cut(s)	732
BseXI	GCAGC	7 cut(s)	84, 310, 1147, 1150, 1153, 1159, 1181
Bsh1236I	CGCG	2 cut(s)	23, 741
BshFI	GGCC	3 cut(s)	81, 150, 1436
BshTI	ACCGGT	1 cut(s)	825
BsiHKAI	GWGCWC	1 cut(s)	732
BsiHKCI	CYCGRG	1 cut(s)	1029
BsiSI	CCGG	3 cut(s)	215, 286, 826
BslFI	GGGAC	3 cut(s)	624, 674, 1084
BslI	CCNNNNNNNGG	4 cut(s)	97, 214, 1010, 1376
BsmAI	GTCTC	3 cut(s)	377, 430, 746
BsmBI	CGTCTC	1 cut(s)	746
BsmFI	GGGAC	3 cut(s)	624, 674, 1084
BsmI	GAATGC	1 cut(s)	527
BsnI	GGCC	3 cut(s)	81, 150, 1436
BsoBI	CYCGRG	1 cut(s)	1029
Bsp1286I	GDGCHC	1 cut(s)	732
Bsp143I	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
Bsp1720I	GCTNAGC	1 cut(s)	29
Bsp19I	CCATGG	1 cut(s)	96
Bsp68I	TCGCGA	1 cut(s)	741
BspACI	CCGC	7 cut(s)	23, 93, 858, 1242, 1352, 1401, 1587
BspANI	GGCC	3 cut(s)	81, 150, 1436
BspCNI	CTCAG	2 cut(s)	511, 1438
BspFNI	CGCG	2 cut(s)	23, 741
BspHI	TCATGA	2 cut(s)	1141, 1594
BspLI	GGNNCC	4 cut(s)	43, 830, 1381, 1530
BspMAI	CTGCAG	2 cut(s)	1171, 1476
BspMI	ACCTGC	4 cut(s)	851, 881, 983, 1333
BspPI	GGATC	3 cut(s)	535, 1051, 1462
BspQI	GCTCTTC	1 cut(s)	843
BsrDI	GCAATG	1 cut(s)	1337
BsrFI	RCCGGY	1 cut(s)	825
BsrI	ACTGG	3 cut(s)	82, 725, 1257
BssAI	RCCGGY	1 cut(s)	825
BssECI	CCNNGG	4 cut(s)	96, 196, 1315, 1509
BssMI	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
BssNAI	GTATAC	1 cut(s)	471
BssT1I	CCWWGG	2 cut(s)	96, 1509
Bst1107I	GTATAC	1 cut(s)	471
Bst2UI	CCWGG	1 cut(s)	1317
Bst4CI	ACNGT	2 cut(s)	561, 747
Bst6I	CTCTTC	3 cut(s)	359, 843, 885
BstBAI	YACGTR	1 cut(s)	984
BstC8I	GCNNGC	5 cut(s)	722, 943, 947, 1158, 1589
BstDEI	CTNAG	4 cut(s)	29, 183, 498, 1425
BstDSI	CCRYGG	1 cut(s)	96
BstF5I	GGATG	1 cut(s)	1606
BstFNI	CGCG	2 cut(s)	23, 741
BstH2I	RGCGCY	1 cut(s)	995
BstHHI	GCGC	2 cut(s)	361, 994
BstKTI	GATC	7 cut(s)	123, 339, 543, 807, 953, 1046, 1470
BstMAI	GTCTC	3 cut(s)	377, 430, 746
BstMBI	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
BstNI	CCWGG	1 cut(s)	1317
BstNSI	RCATGY	3 cut(s)	416, 632, 1363
BstSCI	CCNGG	1 cut(s)	1315
BstSFI	CTRYAG	2 cut(s)	1167, 1472
BstSLI	GKGCMC	1 cut(s)	732
BstUI	CGCG	2 cut(s)	23, 741
BstV1I	GCAGC	7 cut(s)	84, 310, 1147, 1150, 1153, 1159, 1181
BstX2I	RGATCY	1 cut(s)	1467
BstYI	RGATCY	1 cut(s)	1467
BstZ17I	GTATAC	1 cut(s)	471
BsuRI	GGCC	3 cut(s)	81, 150, 1436
BtgI	CCRYGG	1 cut(s)	96
BtsCI	GGATG	1 cut(s)	1606
BtsIMutI	CAGTG	3 cut(s)	557, 732, 1250
BtuMI	TCGCGA	1 cut(s)	741
BveI	ACCTGC	4 cut(s)	851, 881, 983, 1333
Cac8I	GCNNGC	5 cut(s)	722, 943, 947, 1158, 1589
CciI	TCATGA	2 cut(s)	1141, 1594
CfoI	GCGC	2 cut(s)	361, 994
Cfr10I	RCCGGY	1 cut(s)	825
Cfr13I	GGNCC	4 cut(s)	148, 1322, 1435, 1529
CseI	GACGC	1 cut(s)	875
Csp6I	GTAC	7 cut(s)	376, 535, 712, 1001, 1023, 1086, 1284
CspAI	ACCGGT	1 cut(s)	825
CviQI	GTAC	7 cut(s)	376, 535, 712, 1001, 1023, 1086, 1284
DdeI	CTNAG	4 cut(s)	29, 183, 498, 1425
DpnI	GATC	7 cut(s)	122, 338, 542, 806, 952, 1045, 1469
DpnII	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
DrdI	GACNNNNNNGTC	1 cut(s)	391
DseDI	GACNNNNNNGTC	1 cut(s)	391
Eam1104I	CTCTTC	3 cut(s)	359, 843, 885
EarI	CTCTTC	3 cut(s)	359, 843, 885
Eco130I	CCWWGG	2 cut(s)	96, 1509
Eco47I	GGWCC	2 cut(s)	1322, 1529
Eco47III	AGCGCT	1 cut(s)	993
Eco57I	CTGAAG	2 cut(s)	867, 1436
Eco88I	CYCGRG	1 cut(s)	1029
EcoRII	CCWGG	1 cut(s)	1315
EcoT14I	CCWWGG	2 cut(s)	96, 1509
EcoT22I	ATGCAT	1 cut(s)	67
ErhI	CCWWGG	2 cut(s)	96, 1509
Esp3I	CGTCTC	1 cut(s)	746
FaqI	GGGAC	3 cut(s)	624, 674, 1084
FauI	CCCGC	3 cut(s)	16, 100, 1580
FauNDI	CATATG	1 cut(s)	1266
FbaI	TGATCA	1 cut(s)	336
FblI	GTMKAC	2 cut(s)	470, 633
FspBI	CTAG	7 cut(s)	47, 152, 545, 1107, 1220, 1281, 1612
GlaI	GCGC	2 cut(s)	360, 993
GsuI	CTGGAG	1 cut(s)	1451
HaeII	RGCGCY	1 cut(s)	995
HaeIII	GGCC	3 cut(s)	81, 150, 1436
HapII	CCGG	3 cut(s)	215, 286, 826
HgaI	GACGC	1 cut(s)	875
HhaI	GCGC	2 cut(s)	361, 994
Hin6I	GCGC	2 cut(s)	359, 992
HinP1I	GCGC	2 cut(s)	359, 992
HincII	GTYRAC	2 cut(s)	564, 1609
HindII	GTYRAC	2 cut(s)	564, 1609
HinfI	GANTC	7 cut(s)	262, 496, 736, 772, 1274, 1477, 1577
HpaII	CCGG	3 cut(s)	215, 286, 826
HphI	GGTGA	2 cut(s)	875, 1136
Hpy166II	GTNNAC	8 cut(s)	103, 471, 564, 634, 730, 923, 1322, 1609
Hpy188I	TCNGA	6 cut(s)	209, 420, 501, 1017, 1054, 1576
Hpy188III	TCNNGA	8 cut(s)	659, 700, 740, 760, 887, 1007, 1142, 1595
Hpy8I	GTNNAC	8 cut(s)	103, 471, 564, 634, 730, 923, 1322, 1609
HpyAV	CCTTC	2 cut(s)	516, 1517
HpyCH4III	ACNGT	2 cut(s)	561, 747
HpyCH4IV	ACGT	2 cut(s)	755, 983
HpyF3I	CTNAG	4 cut(s)	29, 183, 498, 1425
HpySE526I	ACGT	2 cut(s)	755, 983
HspAI	GCGC	2 cut(s)	359, 992
Ksp22I	TGATCA	1 cut(s)	336
Kzo9I	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
LguI	GCTCTTC	1 cut(s)	843
LmnI	GCTCC	4 cut(s)	672, 1055, 1379, 1488
Lsp1109I	GCAGC	7 cut(s)	84, 310, 1147, 1150, 1153, 1159, 1181
LweI	GCATC	5 cut(s)	826, 885, 1045, 1184, 1600
MaeI	CTAG	7 cut(s)	47, 152, 545, 1107, 1220, 1281, 1612
MaeII	ACGT	2 cut(s)	755, 983
MaeIII	GTNAC	2 cut(s)	593, 863
MalI	GATC	7 cut(s)	122, 338, 542, 806, 952, 1045, 1469
MboI	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
MboII	GAAGA	7 cut(s)	128, 376, 634, 685, 860, 902, 1442
MflI	RGATCY	1 cut(s)	1467
MhlI	GDGCHC	1 cut(s)	732
MluCI	AATT	2 cut(s)	1488, 1582
MlyI	GAGTC	2 cut(s)	490, 1268
MmeI	TCCRAC	2 cut(s)	995, 1556
Mph1103I	ATGCAT	1 cut(s)	67
MroXI	GAANNNNTTC	2 cut(s)	191, 654
MseI	TTAA	3 cut(s)	231, 768, 1257
MslI	CAYNNNNRTG	2 cut(s)	602, 1599
MspA1I	CMGCKG	2 cut(s)	1172, 1429
MspI	CCGG	3 cut(s)	215, 286, 826
MspR9I	CCNGG	1 cut(s)	1317
Mva1269I	GAATGC	1 cut(s)	527
MvaI	CCWGG	1 cut(s)	1317
MvnI	CGCG	2 cut(s)	23, 741
NcoI	CCATGG	1 cut(s)	96
NdeI	CATATG	1 cut(s)	1266
NdeII	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
NlaIV	GGNNCC	4 cut(s)	43, 830, 1381, 1530
NmeAIII	GCCGAG	2 cut(s)	177, 1013
NmuCI	GTSAC	2 cut(s)	593, 863
NruI	TCGCGA	1 cut(s)	741
NsiI	ATGCAT	1 cut(s)	67
NspI	RCATGY	3 cut(s)	416, 632, 1363
PaeR7I	CTCGAG	1 cut(s)	1029
PagI	TCATGA	2 cut(s)	1141, 1594
PaqCI	CACCTGC	1 cut(s)	851
PciI	ACATGT	1 cut(s)	1359
PciSI	GCTCTTC	1 cut(s)	843
PctI	GAATGC	1 cut(s)	527
PdmI	GAANNNNTTC	2 cut(s)	191, 654
PfeI	GAWTC	5 cut(s)	262, 736, 772, 1477, 1577
PinAI	ACCGGT	1 cut(s)	825
PleI	GAGTC	2 cut(s)	490, 1268
PpsI	GAGTC	2 cut(s)	490, 1268
Ppu21I	YACGTR	1 cut(s)	984
PscI	ACATGT	1 cut(s)	1359
Psp6I	CCWGG	1 cut(s)	1315
PspGI	CCWGG	1 cut(s)	1315
PspN4I	GGNNCC	4 cut(s)	43, 830, 1381, 1530
PspPI	GGNCC	4 cut(s)	148, 1322, 1435, 1529
PspXI	VCTCGAGB	1 cut(s)	1029
PsrI	GAACNNNNNNTAC	2 cut(s)	740, 772
PstI	CTGCAG	2 cut(s)	1171, 1476
PsuI	RGATCY	1 cut(s)	1467
PvuII	CAGCTG	2 cut(s)	1172, 1429
RruI	TCGCGA	1 cut(s)	741
RsaI	GTAC	7 cut(s)	377, 536, 713, 1002, 1024, 1087, 1285
RsaNI	GTAC	7 cut(s)	376, 535, 712, 1001, 1023, 1086, 1284
RseI	CAYNNNNRTG	2 cut(s)	602, 1599
SapI	GCTCTTC	1 cut(s)	843
SaqAI	TTAA	3 cut(s)	231, 768, 1257
Sau3AI	GATC	7 cut(s)	120, 336, 540, 804, 950, 1043, 1467
Sau96I	GGNCC	4 cut(s)	148, 1322, 1435, 1529
ScaI	AGTACT	1 cut(s)	1285
SchI	GAGTC	2 cut(s)	490, 1268
ScrFI	CCNGG	1 cut(s)	1317
SduI	GDGCHC	1 cut(s)	732
SfaNI	GCATC	5 cut(s)	826, 885, 1045, 1184, 1600
SfcI	CTRYAG	2 cut(s)	1167, 1472
Sfr274I	CTCGAG	1 cut(s)	1029
SinI	GGWCC	2 cut(s)	1322, 1529
SlaI	CTCGAG	1 cut(s)	1029
SmiMI	CAYNNNNRTG	2 cut(s)	602, 1599
SmlI	CTYRAG	2 cut(s)	1029, 1095
SmoI	CTYRAG	2 cut(s)	1029, 1095
SpeI	ACTAGT	2 cut(s)	1106, 1219
Sse9I	AATT	2 cut(s)	1488, 1582
SsiI	CCGC	7 cut(s)	23, 93, 858, 1242, 1352, 1401, 1587
SspMI	CTAG	7 cut(s)	47, 152, 545, 1107, 1220, 1281, 1612
StyD4I	CCNGG	1 cut(s)	1315
StyI	CCWWGG	2 cut(s)	96, 1509
TaaI	ACNGT	2 cut(s)	561, 747
TaiI	ACGT	2 cut(s)	758, 986
TaqI	TCGA	4 cut(s)	110, 531, 799, 1030
TasI	AATT	2 cut(s)	1488, 1582
TatI	WGTACW	4 cut(s)	375, 534, 711, 1283
TauI	GCSGC	2 cut(s)	1244, 1404
TfiI	GAWTC	5 cut(s)	262, 736, 772, 1477, 1577
Tru1I	TTAA	3 cut(s)	231, 768, 1257
Tru9I	TTAA	3 cut(s)	231, 768, 1257
TscAI	CASTG	3 cut(s)	564, 732, 1257
TseFI	GTSAC	2 cut(s)	593, 863
TseI	GCWGC	8 cut(s)	10, 72, 323, 1160, 1163, 1166, 1169, 1172
Tsp45I	GTSAC	2 cut(s)	593, 863
TspDTI	ATGAA	6 cut(s)	685, 697, 833, 923, 1158, 1364
TspGWI	ACGGA	2 cut(s)	381, 782
TspRI	CASTG	3 cut(s)	564, 732, 1257
VneI	GTGCAC	1 cut(s)	728
VpaK11BI	GGWCC	2 cut(s)	1322, 1529
XapI	RAATTY	1 cut(s)	1488
XceI	RCATGY	3 cut(s)	416, 632, 1363
XcmI	CCANNNNNNNNNTGG	2 cut(s)	124, 1516
XhoI	CTCGAG	1 cut(s)	1029
XmiI	GTMKAC	2 cut(s)	470, 633
XmnI	GAANNNNTTC	2 cut(s)	191, 654
XspI	CTAG	7 cut(s)	47, 152, 545, 1107, 1220, 1281, 1612
ZrmI	AGTACT	1 cut(s)	1285
Zsp2I	ATGCAT	1 cut(s)	67

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.