RLG00000026074

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0003784
Physical Location & Seq
Forward (+)
355746 .. 359352
3607 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026074

Sequence Viewer

Length: 1617 bp
ATGATGAGGCTGCAAACTTACGCGGGGCTTAGTTTGGTAGGAACCCTAGCGATTATTTACCATGCATTTAGCAGCAGAGGCCAGTTTTACCCCGCCATGGTTTACCTATCAACCTCCAAGATCAGTCTGGTGCTTCTTCTCAACATGGGCCTTGTCATCATGTGTATTTTGTGGCAACTGACTAAGAAGCTATTCCTCGGCTCACTCCGAGAGCCGGAGGTTGAGAGACTTAATGAGCAGTCGTGGAGGGAAGTCATGGAGATTCTTTTCGCAATCACTATTTTCCGGCAGGACTTTTCGGTGTCGTTTCTGGCTTTTGTCACTGCTCTCTTGCTGATCAAGGCGTTGCATTGGTTGGCTCAGAAGAGGGTTGAGTACATTGAGACTACTCCGTCTGTTCCCACGCTGTCACATGTTCGGATTGTCTCCTTTTTGGGCTTCTTATTTGTTGTAGATAGTCTCTTTTTGTATACTTCTGTCAGTACCATCATTACGACTCAGAAGCCTTCGGTTTCCCTCTTTTTTGCATTTGAGTACATGATCCTAGCAACAACAACGCTGTCAACATTTGTGAAATATGTTTTCTATGTTAGTGACATGATTATGGAGGGACAATGGGAGAGGAAGCATGTCTACACTTTTTATTTGGAACTTATTCGGGACTTGCTCCACTTATCTATGTATTTGTGCTTCTTCATCGTGATTTTCATGTACTATGGCTTGCCAGTGCACTTGATTCGCGAATTGTATGAGACGTTCAGGAACTTTAAGATTCGTGTTGCTGATTACCTCCGTTATCGAAAGATCACTTCAAACATGAATGACCGGTTCCCAGACGCTACACCTGAAGAGCTTACTGCAGGTGACGCAACCTGCATCATTTGTCGTGAAGAGATGACAATAGCAAAAAAACTATTATGTGGACACCTTTTTCATGTGGCTTGCTTGCGATCATGGTTAGAGCGACAACATACCTGTCCTACGTGCCGAGCCCTTGTTGTACCTCCTGATGGTCGGACAGGTACAGCTCGAGGACAAGGTGGATCACGCTCTGATGCTCATCAACAGGGGACAGGCATATCAGGTGCAACTGCACAAGGTTCAACCAGTGGTGGAGTTGCTGGTGATAACATGAGCCATCATGAAGCAAGACTGCGAGCTGCTGCTGCAGCTGCATCAATATATGAGAAATCTTATGTATATCCATCTGCAAGCAGACTAGTATGGTCTGCTGGATATGCGGCACTTCCTCTGGTTAATAGACATATGGCTGACTCCCCTAGTACTGATTTACAATCACAACCACAGTTTGCAATCCCTGGTGGAGCTTCAAACTTGTCATTGCCTCAATCATCGCATTACATGTATTCTCCTTTTCACGGAGCCAATGGGGAGAGGTCGGGCGGCAATACTAATATAACAGCTTCTCAGCTGGAGGCCCAGAGAGAAGTTCTTCAGCACCAGATTGAGATTCTGCAGAATCAGCTCCAAATTTTACAAAAGCCGAAACCCAATGATTGTGTGGAAGGGGGTCCAACATTAGCAGATAGCAAAGGAAAGAATGTTGCACCTTTGCCTGAATCAGATTGCGGGCGTCATGAGGATGTTGTTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000153 GO:0000209 GO:0000835 GO:0000836 GO:0002020 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006486 GO:0006487 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0016020 GO:0016567 GO:0016740 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030433 GO:0030968 GO:0031984 GO:0032446 GO:0032991 GO:0033554 GO:0034620 GO:0034645 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044322 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051082 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070085 GO:0070647 GO:0070887 GO:0071310 GO:0071704 GO:0071944 GO:0098796 GO:0098827 GO:0140096 GO:1901135 GO:1901137 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901698 GO:1902494 GO:1990234 GO:1990381
KEGG Pathways
Metabolic & Signaling
ko04120 ko04141 map04120 map04141
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

539

Amino Acids

60.33

Weight (kDa)

7.63

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_SYVN1_N PF25563 3 - 272 1.2e-106 E3 ubiquitin-protein ligase synoviolin-like, TPR repeats
zf-rbx1 PF12678 290 - 330 8.7e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 291 - 330 1.5e-10 Ring finger domain
zf-C3HC4 PF00097 292 - 329 1.8e-07 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 292 - 327 2.1e-06 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 851
AasI GACNNNNNNGTC 1 cut(s) 391
Acc36I ACCTGC 2 cut(s) 851, 881
AccI GTMKAC 2 cut(s) 470, 633
AccII CGCG 2 cut(s) 23, 741
AciI CCGC 5 cut(s) 23, 93, 1241, 1404, 1590
AclWI GGATC 2 cut(s) 535, 1051
AcsI RAATTY 1 cut(s) 1491
AcuI CTGAAG 2 cut(s) 867, 1439
AcyI GRCGYC 1 cut(s) 1594
AfaI GTAC 7 cut(s) 377, 484, 536, 713, 1002, 1024, 1285
AfiI CCNNNNNNNGG 4 cut(s) 97, 214, 1010, 1379
AflIII ACRYGT 2 cut(s) 412, 1362
AgeI ACCGGT 1 cut(s) 825
AgsI TTSAA 3 cut(s) 813, 1104, 1332
AhlI ACTAGT 1 cut(s) 1219
AjnI CCWGG 1 cut(s) 1318
AluBI AGCT 9 cut(s) 190, 853, 1028, 1160, 1172, 1328, 1424, 1432, 1486
AluI AGCT 9 cut(s) 190, 853, 1028, 1160, 1172, 1328, 1424, 1432, 1486
Alw21I GWGCWC 1 cut(s) 732
Alw26I GTCTC 5 cut(s) 220, 377, 430, 464, 746
Alw44I GTGCAC 1 cut(s) 728
AlwI GGATC 2 cut(s) 535, 1051
Ama87I CYCGRG 1 cut(s) 1029
AoxI GGCC 3 cut(s) 79, 148, 1437
ApaLI GTGCAC 1 cut(s) 728
ApeKI GCWGC 7 cut(s) 10, 72, 1160, 1163, 1166, 1169, 1172
ApoI RAATTY 1 cut(s) 1491
AsiGI ACCGGT 1 cut(s) 825
Asp700I GAANNNNTTC 3 cut(s) 191, 654, 1452
AspS9I GGNCC 3 cut(s) 148, 1438, 1532
AsuHPI GGTGA 2 cut(s) 875, 1136
AvaI CYCGRG 1 cut(s) 1029
AvaII GGWCC 1 cut(s) 1532
BaeGI GKGCMC 1 cut(s) 732
BanII GRGCYC 1 cut(s) 994
BarI GAAGNNNNNNTAC 4 cut(s) 617, 649, 674, 706
Bbv12I GWGCWC 1 cut(s) 732
BbvI GCAGC 6 cut(s) 84, 1147, 1150, 1153, 1159, 1181
BccI CCATC 4 cut(s) 494, 1004, 1146, 1213
BcgI CGANNNNNNTGC 2 cut(s) 719, 753
BciT130I CCWGG 1 cut(s) 1320
BclI TGATCA 1 cut(s) 336
BcoDI GTCTC 5 cut(s) 220, 377, 430, 464, 746
BcuI ACTAGT 1 cut(s) 1219
BfaI CTAG 4 cut(s) 47, 545, 1220, 1281
BfmI CTRYAG 3 cut(s) 858, 1167, 1475
BfuAI ACCTGC 2 cut(s) 851, 881
BisI GCNGC 9 cut(s) 11, 73, 1161, 1164, 1167, 1170, 1173, 1242, 1405
BlsI GCNGC 9 cut(s) 12, 74, 1162, 1165, 1168, 1171, 1174, 1243, 1406
BmcAI AGTACT 1 cut(s) 1285
Bme1390I CCNGG 1 cut(s) 1320
Bme18I GGWCC 1 cut(s) 1532
BmeT110I CYCGRG 1 cut(s) 1029
BmgT120I GGNCC 3 cut(s) 148, 1438, 1532
BmiI GGNNCC 4 cut(s) 43, 830, 1384, 1533
BmrFI CCNGG 1 cut(s) 1320
BmsI GCATC 3 cut(s) 885, 1045, 1184
BpmI CTGGAG 1 cut(s) 1454
BsaAI YACGTR 1 cut(s) 984
BsaBI GATNNNNATC 1 cut(s) 1059
BsaHI GRCGYC 1 cut(s) 1594
BsaJI CCNNGG 3 cut(s) 96, 196, 1318
BsaWI WCCGGW 1 cut(s) 825
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 214, 1010, 1379
Bse118I RCCGGY 1 cut(s) 825
Bse1I ACTGG 3 cut(s) 82, 725, 1107
Bse3DI GCAATG 1 cut(s) 1340
Bse8I GATNNNNATC 1 cut(s) 1059
BseBI CCWGG 1 cut(s) 1320
BseDI CCNNGG 3 cut(s) 96, 196, 1318
BseGI GGATG 1 cut(s) 1609
BseJI GATNNNNATC 1 cut(s) 1059
BseLI CCNNNNNNNGG 4 cut(s) 97, 214, 1010, 1379
BseMI GCAATG 1 cut(s) 1340
BseMII CTCAG 3 cut(s) 374, 512, 1442
BseNI ACTGG 3 cut(s) 82, 725, 1107
BseSI GKGCMC 1 cut(s) 732
BseXI GCAGC 6 cut(s) 84, 1147, 1150, 1153, 1159, 1181
BsgI GTGCAG 1 cut(s) 1077
Bsh1236I CGCG 2 cut(s) 23, 741
BshFI GGCC 3 cut(s) 81, 150, 1439
BshTI ACCGGT 1 cut(s) 825
BsiHKAI GWGCWC 1 cut(s) 732
BsiHKCI CYCGRG 1 cut(s) 1029
BsiSI CCGG 3 cut(s) 215, 286, 826
BslFI GGGAC 3 cut(s) 624, 674, 1084
BslI CCNNNNNNNGG 4 cut(s) 97, 214, 1010, 1379
BsmAI GTCTC 5 cut(s) 220, 377, 430, 464, 746
BsmBI CGTCTC 1 cut(s) 746
BsmFI GGGAC 3 cut(s) 624, 674, 1084
BsnI GGCC 3 cut(s) 81, 150, 1439
BsoBI CYCGRG 1 cut(s) 1029
Bsp1286I GDGCHC 2 cut(s) 732, 994
Bsp143I GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
Bsp19I CCATGG 1 cut(s) 96
Bsp68I TCGCGA 1 cut(s) 741
BspACI CCGC 5 cut(s) 23, 93, 1241, 1404, 1590
BspANI GGCC 3 cut(s) 81, 150, 1439
BspCNI CTCAG 3 cut(s) 373, 511, 1441
BspFNI CGCG 2 cut(s) 23, 741
BspHI TCATGA 2 cut(s) 1141, 1597
BspLI GGNNCC 4 cut(s) 43, 830, 1384, 1533
BspMAI CTGCAG 3 cut(s) 862, 1171, 1479
BspMI ACCTGC 2 cut(s) 851, 881
BspPI GGATC 2 cut(s) 535, 1051
BspQI GCTCTTC 1 cut(s) 843
BsrDI GCAATG 1 cut(s) 1340
BsrFI RCCGGY 1 cut(s) 825
BsrI ACTGG 3 cut(s) 82, 725, 1107
BssAI RCCGGY 1 cut(s) 825
BssECI CCNNGG 3 cut(s) 96, 196, 1318
BssMI GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
BssNAI GTATAC 1 cut(s) 471
BssNI GRCGYC 1 cut(s) 1594
BssT1I CCWWGG 1 cut(s) 96
Bst1107I GTATAC 1 cut(s) 471
Bst2UI CCWGG 1 cut(s) 1320
Bst4CI ACNGT 1 cut(s) 1308
Bst6I CTCTTC 3 cut(s) 359, 843, 885
BstACI GRCGYC 1 cut(s) 1594
BstBAI YACGTR 1 cut(s) 984
BstC8I GCNNGC 6 cut(s) 722, 943, 947, 1158, 1213, 1592
BstDEI CTNAG 5 cut(s) 29, 183, 360, 498, 1428
BstDSI CCRYGG 1 cut(s) 96
BstF5I GGATG 1 cut(s) 1609
BstFNI CGCG 2 cut(s) 23, 741
BstKTI GATC 6 cut(s) 123, 339, 543, 807, 953, 1046
BstMAI GTCTC 5 cut(s) 220, 377, 430, 464, 746
BstMBI GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
BstMWI GCNNNNNNNGC 7 cut(s) 78, 866, 1166, 1169, 1172, 1238, 1483
BstNI CCWGG 1 cut(s) 1320
BstNSI RCATGY 3 cut(s) 416, 632, 1366
BstSCI CCNGG 1 cut(s) 1318
BstSFI CTRYAG 3 cut(s) 858, 1167, 1475
BstSLI GKGCMC 1 cut(s) 732
BstUI CGCG 2 cut(s) 23, 741
BstV1I GCAGC 6 cut(s) 84, 1147, 1150, 1153, 1159, 1181
BstZ17I GTATAC 1 cut(s) 471
BsuRI GGCC 3 cut(s) 81, 150, 1439
BtgI CCRYGG 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 1338
BtsCI GGATG 1 cut(s) 1609
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 3 cut(s) 321, 732, 1114
BtuMI TCGCGA 1 cut(s) 741
BveI ACCTGC 2 cut(s) 851, 881
Cac8I GCNNGC 6 cut(s) 722, 943, 947, 1158, 1213, 1592
CciI TCATGA 2 cut(s) 1141, 1597
Cfr10I RCCGGY 1 cut(s) 825
Cfr13I GGNCC 3 cut(s) 148, 1438, 1532
CseI GACGC 3 cut(s) 845, 875, 1583
Csp6I GTAC 7 cut(s) 376, 483, 535, 712, 1001, 1023, 1284
CspAI ACCGGT 1 cut(s) 825
CviQI GTAC 7 cut(s) 376, 483, 535, 712, 1001, 1023, 1284
DdeI CTNAG 5 cut(s) 29, 183, 360, 498, 1428
DpnI GATC 6 cut(s) 122, 338, 542, 806, 952, 1045
DpnII GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
DrdI GACNNNNNNGTC 1 cut(s) 391
DseDI GACNNNNNNGTC 1 cut(s) 391
Eam1104I CTCTTC 3 cut(s) 359, 843, 885
EarI CTCTTC 3 cut(s) 359, 843, 885
Eco130I CCWWGG 1 cut(s) 96
Eco24I GRGCYC 1 cut(s) 994
Eco47I GGWCC 1 cut(s) 1532
Eco57I CTGAAG 2 cut(s) 867, 1439
Eco88I CYCGRG 1 cut(s) 1029
EcoRII CCWGG 1 cut(s) 1318
EcoT14I CCWWGG 1 cut(s) 96
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 1 cut(s) 96
Esp3I CGTCTC 1 cut(s) 746
FaqI GGGAC 3 cut(s) 624, 674, 1084
FauI CCCGC 3 cut(s) 16, 100, 1583
FauNDI CATATG 1 cut(s) 1266
FbaI TGATCA 1 cut(s) 336
FblI GTMKAC 2 cut(s) 470, 633
Fnu4HI GCNGC 9 cut(s) 11, 73, 1161, 1164, 1167, 1170, 1173, 1242, 1405
FriOI GRGCYC 1 cut(s) 994
Fsp4HI GCNGC 9 cut(s) 11, 73, 1161, 1164, 1167, 1170, 1173, 1242, 1405
FspBI CTAG 4 cut(s) 47, 545, 1220, 1281
GluI GCNGC 9 cut(s) 11, 73, 1161, 1164, 1167, 1170, 1173, 1242, 1405
GsuI CTGGAG 1 cut(s) 1454
HaeIII GGCC 3 cut(s) 81, 150, 1439
HapII CCGG 3 cut(s) 215, 286, 826
HgaI GACGC 3 cut(s) 845, 875, 1583
Hin1I GRCGYC 1 cut(s) 1594
HincII GTYRAC 1 cut(s) 564
HindII GTYRAC 1 cut(s) 564
HinfI GANTC 8 cut(s) 262, 496, 736, 772, 1274, 1471, 1480, 1580
HpaII CCGG 3 cut(s) 215, 286, 826
HphI GGTGA 2 cut(s) 875, 1136
Hpy166II GTNNAC 6 cut(s) 103, 471, 564, 634, 730, 923
Hpy188I TCNGA 7 cut(s) 209, 363, 420, 501, 1017, 1054, 1585
Hpy188III TCNNGA 8 cut(s) 659, 700, 740, 760, 887, 1007, 1142, 1598
Hpy8I GTNNAC 6 cut(s) 103, 471, 564, 634, 730, 923
HpyAV CCTTC 2 cut(s) 516, 1520
HpyCH4III ACNGT 1 cut(s) 1308
HpyCH4IV ACGT 2 cut(s) 755, 983
HpyF10VI GCNNNNNNNGC 7 cut(s) 78, 866, 1166, 1169, 1172, 1238, 1483
HpyF3I CTNAG 5 cut(s) 29, 183, 360, 498, 1428
HpySE526I ACGT 2 cut(s) 755, 983
Hsp92I GRCGYC 1 cut(s) 1594
Ksp22I TGATCA 1 cut(s) 336
Kzo9I GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
LguI GCTCTTC 1 cut(s) 843
LmnI GCTCC 4 cut(s) 672, 1325, 1382, 1491
Lsp1109I GCAGC 6 cut(s) 84, 1147, 1150, 1153, 1159, 1181
LweI GCATC 3 cut(s) 885, 1045, 1184
MaeI CTAG 4 cut(s) 47, 545, 1220, 1281
MaeII ACGT 2 cut(s) 755, 983
MaeIII GTNAC 4 cut(s) 319, 408, 593, 863
MalI GATC 6 cut(s) 122, 338, 542, 806, 952, 1045
MboI GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
MboII GAAGA 6 cut(s) 128, 376, 685, 860, 902, 1445
MhlI GDGCHC 2 cut(s) 732, 994
MluCI AATT 2 cut(s) 743, 1491
MlyI GAGTC 2 cut(s) 490, 1268
MmeI TCCRAC 2 cut(s) 995, 1559
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 3 cut(s) 191, 654, 1452
MseI TTAA 3 cut(s) 231, 768, 1257
MslI CAYNNNNRTG 2 cut(s) 602, 1602
MspA1I CMGCKG 2 cut(s) 1172, 1432
MspI CCGG 3 cut(s) 215, 286, 826
MspR9I CCNGG 1 cut(s) 1320
MvaI CCWGG 1 cut(s) 1320
MvnI CGCG 2 cut(s) 23, 741
MwoI GCNNNNNNNGC 7 cut(s) 78, 866, 1166, 1169, 1172, 1238, 1483
NcoI CCATGG 1 cut(s) 96
NdeI CATATG 1 cut(s) 1266
NdeII GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
NlaIV GGNNCC 4 cut(s) 43, 830, 1384, 1533
NmeAIII GCCGAG 2 cut(s) 177, 1013
NmuCI GTSAC 4 cut(s) 319, 408, 593, 863
NruI TCGCGA 1 cut(s) 741
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 3 cut(s) 416, 632, 1366
PaeR7I CTCGAG 1 cut(s) 1029
PagI TCATGA 2 cut(s) 1141, 1597
PaqCI CACCTGC 1 cut(s) 851
PciI ACATGT 2 cut(s) 412, 1362
PciSI GCTCTTC 1 cut(s) 843
PdmI GAANNNNTTC 3 cut(s) 191, 654, 1452
PfeI GAWTC 6 cut(s) 262, 736, 772, 1471, 1480, 1580
PinAI ACCGGT 1 cut(s) 825
PkrI GCNGC 9 cut(s) 12, 74, 1162, 1165, 1168, 1171, 1174, 1243, 1406
PleI GAGTC 2 cut(s) 490, 1268
PpsI GAGTC 2 cut(s) 490, 1268
Ppu21I YACGTR 1 cut(s) 984
PscI ACATGT 2 cut(s) 412, 1362
Psp6I CCWGG 1 cut(s) 1318
PspGI CCWGG 1 cut(s) 1318
PspN4I GGNNCC 4 cut(s) 43, 830, 1384, 1533
PspPI GGNCC 3 cut(s) 148, 1438, 1532
PspXI VCTCGAGB 1 cut(s) 1029
PsrI GAACNNNNNNTAC 2 cut(s) 740, 772
PstI CTGCAG 3 cut(s) 862, 1171, 1479
PvuII CAGCTG 2 cut(s) 1172, 1432
RruI TCGCGA 1 cut(s) 741
RsaI GTAC 7 cut(s) 377, 484, 536, 713, 1002, 1024, 1285
RsaNI GTAC 7 cut(s) 376, 483, 535, 712, 1001, 1023, 1284
RseI CAYNNNNRTG 2 cut(s) 602, 1602
SapI GCTCTTC 1 cut(s) 843
SaqAI TTAA 3 cut(s) 231, 768, 1257
SatI GCNGC 9 cut(s) 11, 73, 1161, 1164, 1167, 1170, 1173, 1242, 1405
Sau3AI GATC 6 cut(s) 120, 336, 540, 804, 950, 1043
Sau96I GGNCC 3 cut(s) 148, 1438, 1532
ScaI AGTACT 1 cut(s) 1285
SchI GAGTC 2 cut(s) 490, 1268
ScrFI CCNGG 1 cut(s) 1320
SduI GDGCHC 2 cut(s) 732, 994
SfaNI GCATC 3 cut(s) 885, 1045, 1184
SfcI CTRYAG 3 cut(s) 858, 1167, 1475
Sfr274I CTCGAG 1 cut(s) 1029
SinI GGWCC 1 cut(s) 1532
SlaI CTCGAG 1 cut(s) 1029
SmiMI CAYNNNNRTG 2 cut(s) 602, 1602
SmlI CTYRAG 1 cut(s) 1029
SmoI CTYRAG 1 cut(s) 1029
SpeI ACTAGT 1 cut(s) 1219
Sse9I AATT 2 cut(s) 743, 1491
SsiI CCGC 5 cut(s) 23, 93, 1241, 1404, 1590
SspMI CTAG 4 cut(s) 47, 545, 1220, 1281
StyD4I CCNGG 1 cut(s) 1318
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 1 cut(s) 1308
TaiI ACGT 2 cut(s) 758, 986
TaqI TCGA 2 cut(s) 799, 1030
TasI AATT 2 cut(s) 743, 1491
TatI WGTACW 4 cut(s) 375, 534, 711, 1283
TauI GCSGC 2 cut(s) 1244, 1407
TfiI GAWTC 6 cut(s) 262, 736, 772, 1471, 1480, 1580
Tru1I TTAA 3 cut(s) 231, 768, 1257
Tru9I TTAA 3 cut(s) 231, 768, 1257
TscAI CASTG 3 cut(s) 328, 732, 1114
TseFI GTSAC 4 cut(s) 319, 408, 593, 863
TseI GCWGC 7 cut(s) 10, 72, 1160, 1163, 1166, 1169, 1172
Tsp45I GTSAC 4 cut(s) 319, 408, 593, 863
TspDTI ATGAA 5 cut(s) 685, 697, 833, 923, 1158
TspGWI ACGGA 3 cut(s) 381, 782, 1395
TspRI CASTG 3 cut(s) 328, 732, 1114
VneI GTGCAC 1 cut(s) 728
VpaK11BI GGWCC 1 cut(s) 1532
XapI RAATTY 1 cut(s) 1491
XceI RCATGY 3 cut(s) 416, 632, 1366
XcmI CCANNNNNNNNNTGG 2 cut(s) 124, 1519
XhoI CTCGAG 1 cut(s) 1029
XmiI GTMKAC 2 cut(s) 470, 633
XmnI GAANNNNTTC 3 cut(s) 191, 654, 1452
XspI CTAG 4 cut(s) 47, 545, 1220, 1281
ZrmI AGTACT 1 cut(s) 1285
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.