MD02G1222500.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0004858
Physical Location & Seq
Reverse (-)
25988315 .. 25991597
3283 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1222500.v1.1.491

Sequence Viewer

Length: 2316 bp
ATGAAACTATTAGGTTCTAGGGAAACTGCATTTGGGTTTTTCAAATTAGCCTTTAGAGATGATAGTGAAGGAATTGTGAGGAATTGTTGTATTGCTGCACATTTTTTGGCAGGGGATAATTTGCGGTTTCTAGCTCAGGATGTGCTTTCGTGTGTCATTGCGCGAATCGGGCCAAATAGGAGTAGAGATTTGGTGGGGTTTATGTGGGCAGGTCATTGTCAGTTTGAGTCGGATTTTTCGGTTCTTGATACTCTTATGAGAGGTTTCTTGAATGCTGAAATGGGTTCGGAGGCATTGGAGGTTGTTAGTAGGATGAGGGAGGTGGGGTTGAAGCCGAGTTTGTCAGCAATTGCAATTCTTTTCAGGTTGTTGATTAGAGTTGGTGATTATGGTAGCGTGTGGAAGGTTTTTAGGGATATGCTTCGGAAGGGGCCTCAACCTTGTAATTATACTTTTAATGCGATGATTCTTGGGTTTTGTAGAAAAGGGTTGCTTAGGGTGGGAGAGAGTTTGTTGCATGTGATGTGGAAATTTCAGTGTGATCCGGATGTTATTACATATAACATTGTGATCAATGCAAATTGTGTGAGGGGACAAACAGATGATGCACTTCATTGGGTGCATTTGATGATTGCAAGGGCCTGTAAACCGAGCACGGTTACATTTAGTACTGTCATAAATGCCTTATGTAAGGAGGGAAATATGTTGGAAGCTAGAAAGCTTTTTGATGGGATCCCAGATATGGATGTTTCTCCAAGTACCACTATATACAATACCATGATGGACGGGTACATTAAAGCACGGGACATTGGCCAGGCAAACATGATTTATGAAGAAATGAGGAACAAGGGCATATCTCCTGATGGCATAACATTTAATATCTTGATTGCAGGGCATTACAAGTACGGAAGGGAAGAGGATAGAGACAGGTTGTTAAAGGATTTATCTGTATCAGGGCTGCTTCCAGATTCTTCATTGTATGACATCATGGTTTCTGGGTTATGTTGGGCAGGTCTGTTGGATGATGCCATTGAATTTTTAGAGGATATGCTAGGAAAAGGATTACCTCTGACTGTGGTTGCTTTCAACTCAATTATTGCAGCTTGTAGCAGAGTAGGGTTAGAACAAAAGGCCTATAAGACCTATAAGTTTATGATTACGTTTGGTGTAACTCCTTCGACTTCTACATGTAGTTCTTTGCTTATGGGTTTATCCAAGAAGGGGAACCTGCAAGATGCGAGAGAGCTTTTGTGTAAGATGATAGAGAAGGGGTTCCCTATAAAAAAAACTGCTTTCACTGTGCTTTTGGATGGGTACTTTCGAGCTGGTGATTTGGATGGGGCTCAAAATTTGTGGAATGAGATGGAAAGAAGAGGGATATGTCCTGATGTTGTTGCCTTCTCAGCATTTATCAATGGACTATGTAAAGCGGGTCTAGTGGAAGAGGCATATGATATATATCTGGATATGACAAGGAAGGGGTTTGTGCCAAACAATTTTGTCTATAATTCTTTAATTGGCGGGTTTTGCAGCCGTGGGAAGTTGAGTGATGCACTGAAGTTAGAGAGAGAGATGAGGCAAAAGGGGCTTCTTCCGGATATCTTTACCACCAATATGATCATTAATGGGTTCTGTAAACAGGGGAGAATGAAGTCAGCAATTGATACATTTATGGACATGGACCGAACTGGGTTAACCCCAGATATAGTCACTTACAATACCTTAATTGGTGGTTATTGTAAAGCATTTGACATGGTCAGAGCAGATGAGTTTTTGTATAAAATGTGTGCCAGTGGATTTGAACCTGATATTACAACCTATAATATACGCATACAGGTTTTTTGTAGCACTCGAAAAATTAGTCAAGCTATGATGATGCTGGATGAGCTTGTTTCAAGAGGTGTTGTTCCAGACTCAGTCACATACAACACGATGATGAATGGTGCTTGTATTGACATACTGGATCATGCTATGATTTTAATGGCTAAATTGCTTAAGTTGGCGTTTCTTCCGAATGCTGTTACAATTAATGTGTTGTTGTCCCAGTTCTGCAAGCAGGGAATGCCTGAGAAGGCCCTCATGTGGGGTCAGAAGTTGAGTGAGTTTTCCATTTGTTTTGACGAAATTACGTATAAATTATTGGACAGAGCCTATCATAATATGCAAGAAGATTCCGAAATTTCAAGTGGAACAGCTGAAAAAAGGCTCTTCCTGGATTTCCTTATGTACATTACATATGATTGTTTATGTAGAAATAAACCTTGCAGAGATGCAAGTCAAAATGTTCTTCAATTAATTGAATTTAGCGGCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 map00500
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

772

Amino Acids

86.53

Weight (kDa)

6.32

Isoelectric Point (pI)

29.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 119 - 161 2.8e-07 PPR repeat family
PPR_2 PF13041 147 - 195 3.2e-10 PPR repeat family
PPR_2 PF13041 182 - 231 2.1e-13 PPR repeat family
PPR_1 PF12854 215 - 243 1.6e-09 PPR repeat
PPR_2 PF13041 217 - 253 5.2e-06 PPR repeat family
PPR_3 PF13812 241 - 296 4.5e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 252 - 300 1.3e-14 PPR repeat family
PPR_1 PF12854 319 - 350 4.7e-08 PPR repeat
PPR_long PF17177 342 - 468 2.6e-07 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 358 - 406 1.4e-06 PPR repeat family
PPR PF01535 431 - 460 3.8e-06 PPR repeat
PPR_2 PF13041 431 - 476 1.8e-13 PPR repeat family
PPR_1 PF12854 458 - 487 1.6e-09 PPR repeat
PPR_2 PF13041 462 - 510 9e-15 PPR repeat family
PPR PF01535 465 - 495 1.4e-06 PPR repeat
PPR_3 PF13812 487 - 544 1.4e-07 Pentatricopeptide repeat domain
TPR_24 PF23276 490 - 588 8.6e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 493 - 526 3e-10 PPR repeat
PPR_2 PF13041 497 - 546 2.9e-15 PPR repeat family
PPR PF01535 501 - 530 9e-07 PPR repeat
PPR_3 PF13812 521 - 579 1e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 528 - 560 6.6e-08 PPR repeat
PPR_2 PF13041 532 - 581 7.5e-18 PPR repeat family
PPR_3 PF13812 558 - 614 4.5e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 564 - 595 7e-08 PPR repeat
PPR_2 PF13041 567 - 615 1.1e-13 PPR repeat family
PPR PF01535 570 - 600 8.6e-06 PPR repeat
PPR_2 PF13041 602 - 650 5.9e-14 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 200, 1001, 1236
AccII CGCG 1 cut(s) 163
AccIII TCCGGA 2 cut(s) 544, 1594
AciI CCGC 4 cut(s) 124, 1430, 1521, 2307
AclWI GGATC 4 cut(s) 536, 727, 740, 1971
AcoI YGGCCR 1 cut(s) 811
AcsI RAATTY 5 cut(s) 530, 1034, 1348, 2178, 2300
AcuI CTGAAG 1 cut(s) 1577
AfaI GTAC 6 cut(s) 670, 760, 791, 905, 1316, 2228
AfiI CCNNNNNNNGG 4 cut(s) 742, 1221, 2082, 2083
AflII CTTAAG 1 cut(s) 1994
AflIII ACRYGT 1 cut(s) 1187
AjnI CCWGG 2 cut(s) 813, 2211
AjuI GAANNNNNNNTTGG 2 cut(s) 15, 47
AluBI AGCT 9 cut(s) 134, 713, 721, 1103, 1246, 1325, 1868, 1888, 2195
AluI AGCT 9 cut(s) 134, 713, 721, 1103, 1246, 1325, 1868, 1888, 2195
Alw21I GWGCWC 1 cut(s) 656
Alw26I GTCTC 1 cut(s) 918
AlwI GGATC 4 cut(s) 536, 727, 740, 1971
Aor13HI TCCGGA 2 cut(s) 544, 1594
AoxI GGCC 6 cut(s) 170, 431, 639, 811, 1131, 2073
ApeKI GCWGC 4 cut(s) 95, 958, 1100, 1530
ApoI RAATTY 5 cut(s) 530, 1034, 1348, 2178, 2300
ArsI GACNNNNNNTTYG 2 cut(s) 1846, 1878
AseI ATTAAT 3 cut(s) 1623, 2028, 2294
Asp700I GAANNNNTTC 1 cut(s) 1271
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 5 cut(s) 170, 431, 639, 1681, 2074
AsuHPI GGTGA 2 cut(s) 395, 1340
AvaII GGWCC 1 cut(s) 1681
BalI TGGCCA 1 cut(s) 813
BamHI GGATCC 1 cut(s) 732
BanII GRGCYC 1 cut(s) 1345
Bbv12I GWGCWC 1 cut(s) 656
BbvI GCAGC 4 cut(s) 82, 945, 1112, 1542
BccI CCATC 6 cut(s) 722, 775, 857, 1304, 1331, 1357
BceAI ACGGC 1 cut(s) 1518
BciT130I CCWGG 2 cut(s) 815, 2213
BclI TGATCA 2 cut(s) 570, 1617
BcoDI GTCTC 1 cut(s) 918
BfaI CTAG 5 cut(s) 18, 131, 714, 1052, 1436
BfrI CTTAAG 1 cut(s) 1994
BfuAI ACCTGC 3 cut(s) 200, 1001, 1236
BisI GCNGC 5 cut(s) 96, 959, 1101, 1531, 2308
BlsI GCNGC 5 cut(s) 97, 960, 1102, 1532, 2309
BmcAI AGTACT 1 cut(s) 670
Bme1390I CCNGG 2 cut(s) 815, 2213
Bme18I GGWCC 1 cut(s) 1681
BmgT120I GGNCC 5 cut(s) 170, 431, 639, 1681, 2074
BmiI GGNNCC 5 cut(s) 432, 734, 1226, 1274, 2311
BmrFI CCNGG 2 cut(s) 815, 2213
BmrI ACTGGG 2 cut(s) 1698, 2038
BmsI GCATC 6 cut(s) 595, 1015, 1225, 1540, 1866, 2260
BmuI ACTGGG 2 cut(s) 1698, 2038
Bpu10I CCTNAGC 2 cut(s) 135, 494
BsaAI YACGTR 1 cut(s) 2130
BsaBI GATNNNNATC 1 cut(s) 1458
BsaJI CCNNGG 1 cut(s) 1534
BsaWI WCCGGW 2 cut(s) 544, 1594
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 4 cut(s) 742, 1221, 2082, 2083
Bse1I ACTGG 4 cut(s) 1693, 1791, 1965, 2044
Bse3DI GCAATG 1 cut(s) 156
Bse8I GATNNNNATC 1 cut(s) 1458
BseAI TCCGGA 2 cut(s) 544, 1594
BseBI CCWGG 2 cut(s) 815, 2213
BseDI CCNNGG 1 cut(s) 1534
BseGI GGATG 8 cut(s) 145, 318, 553, 751, 1027, 1315, 1342, 1888
BseJI GATNNNNATC 1 cut(s) 1458
BseLI CCNNNNNNNGG 4 cut(s) 742, 1221, 2082, 2083
BseMI GCAATG 1 cut(s) 156
BseMII CTCAG 4 cut(s) 149, 1416, 1929, 2058
BseNI ACTGG 4 cut(s) 1693, 1791, 1965, 2044
BseXI GCAGC 4 cut(s) 82, 945, 1112, 1542
BsgI GTGCAG 1 cut(s) 81
Bsh1236I CGCG 1 cut(s) 163
BshFI GGCC 6 cut(s) 172, 433, 641, 813, 1133, 2075
BsiHKAI GWGCWC 1 cut(s) 656
BsiSI CCGG 2 cut(s) 545, 1595
BslFI GGGAC 3 cut(s) 606, 818, 2026
BslI CCNNNNNNNGG 4 cut(s) 742, 1221, 2082, 2083
BsmAI GTCTC 1 cut(s) 918
BsmFI GGGAC 3 cut(s) 606, 818, 2026
BsmI GAATGC 3 cut(s) 277, 2020, 2067
BsnI GGCC 6 cut(s) 172, 433, 641, 813, 1133, 2075
Bsp1286I GDGCHC 2 cut(s) 656, 1345
Bsp13I TCCGGA 2 cut(s) 544, 1594
Bsp1407I TGTACA 1 cut(s) 2226
Bsp143I GATC 5 cut(s) 541, 570, 732, 1617, 1963
BspACI CCGC 4 cut(s) 124, 1430, 1521, 2307
BspANI GGCC 6 cut(s) 172, 433, 641, 813, 1133, 2075
BspCNI CTCAG 4 cut(s) 148, 1415, 1928, 2059
BspEI TCCGGA 2 cut(s) 544, 1594
BspFNI CGCG 1 cut(s) 163
BspLI GGNNCC 5 cut(s) 432, 734, 1226, 1274, 2311
BspMI ACCTGC 3 cut(s) 200, 1001, 1236
BspPI GGATC 4 cut(s) 536, 727, 740, 1971
BspQI GCTCTTC 1 cut(s) 2213
BspTI CTTAAG 1 cut(s) 1994
BsrDI GCAATG 1 cut(s) 156
BsrGI TGTACA 1 cut(s) 2226
BsrI ACTGG 4 cut(s) 1693, 1791, 1965, 2044
BssECI CCNNGG 1 cut(s) 1534
BssMI GATC 5 cut(s) 541, 570, 732, 1617, 1963
Bst2UI CCWGG 2 cut(s) 815, 2213
Bst4CI ACNGT 4 cut(s) 658, 673, 1075, 1300
Bst6I CTCTTC 4 cut(s) 909, 1366, 1437, 2213
BstAFI CTTAAG 1 cut(s) 1994
BstAPI GCANNNNNTGC 1 cut(s) 2062
BstAUI TGTACA 1 cut(s) 2226
BstBAI YACGTR 1 cut(s) 2130
BstC8I GCNNGC 1 cut(s) 2054
BstDEI CTNAG 5 cut(s) 135, 494, 1402, 1915, 2067
BstDSI CCRYGG 1 cut(s) 1534
BstF5I GGATG 8 cut(s) 145, 318, 553, 751, 1027, 1315, 1342, 1888
BstFNI CGCG 1 cut(s) 163
BstHHI GCGC 1 cut(s) 163
BstKTI GATC 5 cut(s) 544, 573, 735, 1620, 1966
BstMAI GTCTC 1 cut(s) 918
BstMBI GATC 5 cut(s) 541, 570, 732, 1617, 1963
BstMWI GCNNNNNNNGC 6 cut(s) 169, 1403, 1527, 1585, 1885, 2062
BstNI CCWGG 2 cut(s) 815, 2213
BstNSI RCATGY 2 cut(s) 521, 1191
BstSCI CCNGG 2 cut(s) 813, 2211
BstSNI TACGTA 1 cut(s) 2130
BstUI CGCG 1 cut(s) 163
BstV1I GCAGC 4 cut(s) 82, 945, 1112, 1542
BstX2I RGATCY 1 cut(s) 732
BstYI RGATCY 1 cut(s) 732
BsuRI GGCC 6 cut(s) 172, 433, 641, 813, 1133, 2075
BtgI CCRYGG 1 cut(s) 1534
BtgZI GCGATG 1 cut(s) 476
BtsCI GGATG 8 cut(s) 145, 318, 553, 751, 1027, 1315, 1342, 1888
BtsIMutI CAGTG 4 cut(s) 542, 1296, 1553, 1798
BveI ACCTGC 3 cut(s) 200, 1001, 1236
Cac8I GCNNGC 1 cut(s) 2054
CfoI GCGC 1 cut(s) 163
Cfr13I GGNCC 5 cut(s) 170, 431, 639, 1681, 2074
Csp6I GTAC 6 cut(s) 669, 759, 790, 904, 1315, 2227
CspCI CAANNNNNGTGG 2 cut(s) 1334, 1369
CviAII CATG 9 cut(s) 518, 778, 823, 988, 1188, 1678, 1753, 1967, 2080
CviQI GTAC 6 cut(s) 669, 759, 790, 904, 1315, 2227
DdeI CTNAG 5 cut(s) 135, 494, 1402, 1915, 2067
DpnI GATC 5 cut(s) 543, 572, 734, 1619, 1965
DpnII GATC 5 cut(s) 541, 570, 732, 1617, 1963
EaeI YGGCCR 1 cut(s) 811
Eam1104I CTCTTC 4 cut(s) 909, 1366, 1437, 2213
EarI CTCTTC 4 cut(s) 909, 1366, 1437, 2213
Eco105I TACGTA 1 cut(s) 2130
Eco147I AGGCCT 1 cut(s) 1133
Eco24I GRGCYC 1 cut(s) 1345
Eco32I GATATC 1 cut(s) 1600
Eco47I GGWCC 1 cut(s) 1681
Eco57I CTGAAG 1 cut(s) 1577
EcoO109I RGGNCCY 3 cut(s) 431, 639, 2074
EcoRII CCWGG 2 cut(s) 813, 2211
EcoRV GATATC 1 cut(s) 1600
EcoT38I GRGCYC 1 cut(s) 1345
FaeI CATG 9 cut(s) 521, 781, 826, 991, 1191, 1681, 1756, 1970, 2083
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 3 cut(s) 606, 818, 2026
FatI CATG 9 cut(s) 517, 777, 822, 987, 1187, 1677, 1752, 1966, 2079
FauI CCCGC 2 cut(s) 1423, 1514
FauNDI CATATG 2 cut(s) 1450, 2236
FbaI TGATCA 2 cut(s) 570, 1617
Fnu4HI GCNGC 5 cut(s) 96, 959, 1101, 1531, 2308
FokI GGATG 8 cut(s) 152, 325, 560, 758, 1034, 1322, 1349, 1895
FriOI GRGCYC 1 cut(s) 1345
Fsp4HI GCNGC 5 cut(s) 96, 959, 1101, 1531, 2308
FspBI CTAG 5 cut(s) 18, 131, 714, 1052, 1436
GlaI GCGC 1 cut(s) 162
GluI GCNGC 5 cut(s) 96, 959, 1101, 1531, 2308
HaeIII GGCC 6 cut(s) 172, 433, 641, 813, 1133, 2075
HapII CCGG 2 cut(s) 545, 1595
HhaI GCGC 1 cut(s) 163
Hin1II CATG 9 cut(s) 521, 781, 826, 991, 1191, 1681, 1756, 1970, 2083
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HincII GTYRAC 1 cut(s) 1695
HindII GTYRAC 1 cut(s) 1695
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 6 cut(s) 165, 227, 466, 968, 1913, 2171
HpaI GTTAAC 1 cut(s) 1695
HpaII CCGG 2 cut(s) 545, 1595
HphI GGTGA 2 cut(s) 395, 1340
Hpy166II GTNNAC 3 cut(s) 647, 1637, 1695
Hpy188I TCNGA 8 cut(s) 232, 289, 426, 1071, 1760, 2013, 2091, 2176
Hpy8I GTNNAC 3 cut(s) 647, 1637, 1695
HpyCH4III ACNGT 4 cut(s) 658, 673, 1075, 1300
HpyCH4IV ACGT 2 cut(s) 1160, 2129
HpyF10VI GCNNNNNNNGC 6 cut(s) 169, 1403, 1527, 1585, 1885, 2062
HpyF3I CTNAG 5 cut(s) 135, 494, 1402, 1915, 2067
HpySE526I ACGT 2 cut(s) 1160, 2129
Hsp92II CATG 9 cut(s) 521, 781, 826, 991, 1191, 1681, 1756, 1970, 2083
HspAI GCGC 1 cut(s) 161
Kpn2I TCCGGA 2 cut(s) 544, 1594
Ksp22I TGATCA 2 cut(s) 570, 1617
KspAI GTTAAC 1 cut(s) 1695
Kzo9I GATC 5 cut(s) 541, 570, 732, 1617, 1963
LguI GCTCTTC 1 cut(s) 2213
LmnI GCTCC 1 cut(s) 2315
Lsp1109I GCAGC 4 cut(s) 82, 945, 1112, 1542
LweI GCATC 6 cut(s) 595, 1015, 1225, 1540, 1866, 2260
MaeI CTAG 5 cut(s) 18, 131, 714, 1052, 1436
MaeII ACGT 2 cut(s) 1160, 2129
MaeIII GTNAC 5 cut(s) 658, 1168, 1708, 1918, 2020
MalI GATC 5 cut(s) 543, 572, 734, 1619, 1965
MboI GATC 5 cut(s) 541, 570, 732, 1617, 1963
MfeI CAATTG 2 cut(s) 348, 1659
MflI RGATCY 1 cut(s) 732
MhlI GDGCHC 2 cut(s) 656, 1345
MlsI TGGCCA 1 cut(s) 813
MluNI TGGCCA 1 cut(s) 813
MlyI GAGTC 2 cut(s) 236, 1907
MmeI TCCRAC 3 cut(s) 210, 687, 999
Mox20I TGGCCA 1 cut(s) 813
MroI TCCGGA 2 cut(s) 544, 1594
MroXI GAANNNNTTC 1 cut(s) 1271
MscI TGGCCA 1 cut(s) 813
MslI CAYNNNNRTG 2 cut(s) 1613, 1934
Msp20I TGGCCA 1 cut(s) 813
MspA1I CMGCKG 1 cut(s) 2195
MspCI CTTAAG 1 cut(s) 1994
MspI CCGG 2 cut(s) 545, 1595
MspR9I CCNGG 2 cut(s) 815, 2213
MunI CAATTG 2 cut(s) 348, 1659
Mva1269I GAATGC 3 cut(s) 277, 2020, 2067
MvaI CCWGG 2 cut(s) 815, 2213
MvnI CGCG 1 cut(s) 163
MwoI GCNNNNNNNGC 6 cut(s) 169, 1403, 1527, 1585, 1885, 2062
NdeI CATATG 2 cut(s) 1450, 2236
NdeII GATC 5 cut(s) 541, 570, 732, 1617, 1963
NlaIII CATG 9 cut(s) 521, 781, 826, 991, 1191, 1681, 1756, 1970, 2083
NlaIV GGNNCC 5 cut(s) 432, 734, 1226, 1274, 2311
NmeAIII GCCGAG 1 cut(s) 360
NmuCI GTSAC 2 cut(s) 1708, 1918
NspI RCATGY 2 cut(s) 521, 1191
PceI AGGCCT 1 cut(s) 1133
PciI ACATGT 1 cut(s) 1187
PciSI GCTCTTC 1 cut(s) 2213
PctI GAATGC 3 cut(s) 277, 2020, 2067
PdmI GAANNNNTTC 1 cut(s) 1271
PfeI GAWTC 4 cut(s) 165, 466, 968, 2171
PflFI GACNNNGTC 2 cut(s) 1754, 1916
PfoI TCCNGGA 1 cut(s) 2211
PkrI GCNGC 5 cut(s) 97, 960, 1102, 1532, 2309
PleI GAGTC 2 cut(s) 235, 1907
PpsI GAGTC 2 cut(s) 235, 1907
Ppu21I YACGTR 1 cut(s) 2130
PscI ACATGT 1 cut(s) 1187
PshBI ATTAAT 3 cut(s) 1623, 2028, 2294
Psp6I CCWGG 2 cut(s) 813, 2211
PspGI CCWGG 2 cut(s) 813, 2211
PspN4I GGNNCC 5 cut(s) 432, 734, 1226, 1274, 2311
PspPI GGNCC 5 cut(s) 170, 431, 639, 1681, 2074
PsuI RGATCY 1 cut(s) 732
PsyI GACNNNGTC 2 cut(s) 1754, 1916
PvuII CAGCTG 1 cut(s) 2195
RsaI GTAC 6 cut(s) 670, 760, 791, 905, 1316, 2228
RsaNI GTAC 6 cut(s) 669, 759, 790, 904, 1315, 2227
RseI CAYNNNNRTG 2 cut(s) 1613, 1934
SapI GCTCTTC 1 cut(s) 2213
SatI GCNGC 5 cut(s) 96, 959, 1101, 1531, 2308
Sau3AI GATC 5 cut(s) 541, 570, 732, 1617, 1963
Sau96I GGNCC 5 cut(s) 170, 431, 639, 1681, 2074
ScaI AGTACT 1 cut(s) 670
SchI GAGTC 2 cut(s) 236, 1907
ScrFI CCNGG 2 cut(s) 815, 2213
SduI GDGCHC 2 cut(s) 656, 1345
SfaNI GCATC 6 cut(s) 595, 1015, 1225, 1540, 1866, 2260
SinI GGWCC 1 cut(s) 1681
SmiMI CAYNNNNRTG 2 cut(s) 1613, 1934
SmlI CTYRAG 1 cut(s) 1994
SmoI CTYRAG 1 cut(s) 1994
SnaBI TACGTA 1 cut(s) 2130
SseBI AGGCCT 1 cut(s) 1133
SsiI CCGC 4 cut(s) 124, 1430, 1521, 2307
SspMI CTAG 5 cut(s) 18, 131, 714, 1052, 1436
StuI AGGCCT 1 cut(s) 1133
StyD4I CCNGG 2 cut(s) 813, 2211
TaaI ACNGT 4 cut(s) 658, 673, 1075, 1300
TaiI ACGT 2 cut(s) 1163, 2132
TaqI TCGA 3 cut(s) 1178, 1321, 1852
TaqII GACCGA 1 cut(s) 1698
TatI WGTACW 2 cut(s) 668, 2226
TauI GCSGC 1 cut(s) 2310
TfiI GAWTC 4 cut(s) 165, 466, 968, 2171
TscAI CASTG 4 cut(s) 542, 1303, 1560, 1798
TseFI GTSAC 2 cut(s) 1708, 1918
TseI GCWGC 4 cut(s) 95, 958, 1100, 1530
Tsp45I GTSAC 2 cut(s) 1708, 1918
TspDTI ATGAA 6 cut(s) 17, 602, 846, 963, 1664, 1952
TspGWI ACGGA 1 cut(s) 921
TspRI CASTG 4 cut(s) 542, 1303, 1560, 1798
Tth111I GACNNNGTC 2 cut(s) 1754, 1916
Vha464I CTTAAG 1 cut(s) 1994
VpaK11BI GGWCC 1 cut(s) 1681
VspI ATTAAT 3 cut(s) 1623, 2028, 2294
XapI RAATTY 5 cut(s) 530, 1034, 1348, 2178, 2300
XceI RCATGY 2 cut(s) 521, 1191
XmnI GAANNNNTTC 1 cut(s) 1271
XspI CTAG 5 cut(s) 18, 131, 714, 1052, 1436
ZrmI AGTACT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.