PDE318 PDE318 (pigment defective 318)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g25080 |
| malus_domestica | MD02G1222500.v1.1 MD07G1092900.v1.1 MD07G1093100.v1.1 |
| prunus_persica | Prupe.1G180300_v2.0.a1 |
| pyrus_communis | pycom07g07630 |
| rosa_chinensis | RchiOBHm_Chr4g0407101 RchiOBHm_Chr4g0407111 RchiOBHm_Chr7g0215291 |
| rosa_laevigata | RLG00000002673 RLG00000008854 |
| rosa_multiflora | Rmu_co8487181.1_g000001 Rmu_sc0002701.1_g000058 Rmu_ssc0000126.1_g000065 |
| rosa_roxburghii | Rroxscaffold_3G00244320 Rroxscaffold_6G00393890 |
| rosa_rugosa | Rorug07G0151900 Rorug07G0152000 |
| rosa_samantha | Rh4AG142800 Rh4BG121000 Rh4CG149300 Rh4CG149400 Rh4DG124200 Rh7AG288500 Rh7AG288700 Rh7BG280700 Rh7CG308400 Rh7CG308500 Rh7DG292200 |
| rosa_wichuraiana | Rw7G024670 Rw7G024680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 198 |
| AfaI | GTAC | 1 cut(s) | 64 |
| AluBI | AGCT | 1 cut(s) | 26 |
| AluI | AGCT | 1 cut(s) | 26 |
| ApeKI | GCWGC | 1 cut(s) | 94 |
| AspS9I | GGNCC | 1 cut(s) | 201 |
| AvaII | GGWCC | 1 cut(s) | 201 |
| BanII | GRGCYC | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BclI | TGATCA | 1 cut(s) | 214 |
| BfmI | CTRYAG | 2 cut(s) | 15, 58 |
| BisI | GCNGC | 1 cut(s) | 95 |
| BlsI | GCNGC | 1 cut(s) | 96 |
| BmcAI | AGTACT | 1 cut(s) | 64 |
| Bme18I | GGWCC | 1 cut(s) | 201 |
| BmgT120I | GGNCC | 1 cut(s) | 201 |
| BmiI | GGNNCC | 2 cut(s) | 76, 202 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BpmI | CTGGAG | 1 cut(s) | 210 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BslFI | GGGAC | 1 cut(s) | 214 |
| BsmFI | GGGAC | 1 cut(s) | 214 |
| BsmI | GAATGC | 1 cut(s) | 200 |
| Bsp1286I | GDGCHC | 1 cut(s) | 79 |
| Bsp143I | GATC | 1 cut(s) | 214 |
| BspACI | CCGC | 1 cut(s) | 198 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BspLI | GGNNCC | 2 cut(s) | 76, 202 |
| BssMI | GATC | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 2 cut(s) | 59, 67 |
| BstC8I | GCNNGC | 1 cut(s) | 174 |
| BstDEI | CTNAG | 1 cut(s) | 87 |
| BstKTI | GATC | 1 cut(s) | 217 |
| BstMBI | GATC | 1 cut(s) | 214 |
| BstNSI | RCATGY | 1 cut(s) | 176 |
| BstSFI | CTRYAG | 2 cut(s) | 15, 58 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 1 cut(s) | 174 |
| Cfr13I | GGNCC | 1 cut(s) | 201 |
| Csp6I | GTAC | 1 cut(s) | 63 |
| CviAII | CATG | 2 cut(s) | 173, 179 |
| CviJI | RGCY | 4 cut(s) | 14, 26, 77, 97 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 26, 77, 97 |
| CviQI | GTAC | 1 cut(s) | 63 |
| DdeI | CTNAG | 1 cut(s) | 87 |
| DpnI | GATC | 1 cut(s) | 216 |
| DpnII | GATC | 1 cut(s) | 214 |
| Eco24I | GRGCYC | 1 cut(s) | 79 |
| Eco47I | GGWCC | 1 cut(s) | 201 |
| EcoO109I | RGGNCCY | 1 cut(s) | 201 |
| EcoT22I | ATGCAT | 1 cut(s) | 174 |
| EcoT38I | GRGCYC | 1 cut(s) | 79 |
| FaeI | CATG | 2 cut(s) | 176, 182 |
| FaiI | YATR | 5 cut(s) | 55, 174, 180, 236, 238 |
| FaqI | GGGAC | 1 cut(s) | 214 |
| FatI | CATG | 2 cut(s) | 172, 178 |
| FauI | CCCGC | 1 cut(s) | 191 |
| FbaI | TGATCA | 1 cut(s) | 214 |
| Fnu4HI | GCNGC | 1 cut(s) | 95 |
| FriOI | GRGCYC | 1 cut(s) | 79 |
| Fsp4HI | GCNGC | 1 cut(s) | 95 |
| GluI | GCNGC | 1 cut(s) | 95 |
| GsuI | CTGGAG | 1 cut(s) | 210 |
| Hin1II | CATG | 2 cut(s) | 176, 182 |
| Hpy188I | TCNGA | 1 cut(s) | 214 |
| Hpy188III | TCNNGA | 2 cut(s) | 86, 189 |
| Hpy99I | CGWCG | 1 cut(s) | 45 |
| HpyAV | CCTTC | 1 cut(s) | 219 |
| HpyCH4III | ACNGT | 2 cut(s) | 59, 67 |
| HpyCH4V | TGCA | 3 cut(s) | 94, 164, 172 |
| HpyF3I | CTNAG | 1 cut(s) | 87 |
| Hsp92II | CATG | 2 cut(s) | 176, 182 |
| Ksp22I | TGATCA | 1 cut(s) | 214 |
| Kzo9I | GATC | 1 cut(s) | 214 |
| LmnI | GCTCC | 1 cut(s) | 74 |
| LpnPI | CCDG | 2 cut(s) | 99, 174 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| LweI | GCATC | 1 cut(s) | 81 |
| MalI | GATC | 1 cut(s) | 216 |
| MboI | GATC | 1 cut(s) | 214 |
| MfeI | CAATTG | 1 cut(s) | 152 |
| MhlI | GDGCHC | 1 cut(s) | 79 |
| MluCI | AATT | 3 cut(s) | 117, 127, 152 |
| MnlI | CCTC | 4 cut(s) | 99, 108, 194, 214 |
| Mph1103I | ATGCAT | 1 cut(s) | 174 |
| MseI | TTAA | 1 cut(s) | 225 |
| MslI | CAYNNNNRTG | 1 cut(s) | 177 |
| MunI | CAATTG | 1 cut(s) | 152 |
| Mva1269I | GAATGC | 1 cut(s) | 200 |
| NdeII | GATC | 1 cut(s) | 214 |
| NlaIII | CATG | 2 cut(s) | 176, 182 |
| NlaIV | GGNNCC | 2 cut(s) | 76, 202 |
| NsiI | ATGCAT | 1 cut(s) | 174 |
| NspI | RCATGY | 1 cut(s) | 176 |
| PaeI | GCATGC | 1 cut(s) | 176 |
| PctI | GAATGC | 1 cut(s) | 200 |
| PkrI | GCNGC | 1 cut(s) | 96 |
| PpuMI | RGGWCCY | 1 cut(s) | 201 |
| Psp5II | RGGWCCY | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 2 cut(s) | 76, 202 |
| PspPI | GGNCC | 1 cut(s) | 201 |
| PspPPI | RGGWCCY | 1 cut(s) | 201 |
| RsaI | GTAC | 1 cut(s) | 64 |
| RsaNI | GTAC | 1 cut(s) | 63 |
| RseI | CAYNNNNRTG | 1 cut(s) | 177 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| SatI | GCNGC | 1 cut(s) | 95 |
| Sau3AI | GATC | 1 cut(s) | 214 |
| Sau96I | GGNCC | 1 cut(s) | 201 |
| ScaI | AGTACT | 1 cut(s) | 64 |
| SduI | GDGCHC | 1 cut(s) | 79 |
| SetI | ASST | 3 cut(s) | 28, 186, 206 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| SfcI | CTRYAG | 2 cut(s) | 15, 58 |
| SgeI | CNNG | 7 cut(s) | 35, 98, 185, 191, 201, 211, 230 |
| SinI | GGWCC | 1 cut(s) | 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 177 |
| SphI | GCATGC | 1 cut(s) | 176 |
| Sse9I | AATT | 3 cut(s) | 117, 127, 152 |
| SsiI | CCGC | 1 cut(s) | 198 |
| SspI | AATATT | 1 cut(s) | 8 |
| TaaI | ACNGT | 2 cut(s) | 59, 67 |
| TaqI | TCGA | 1 cut(s) | 40 |
| TasI | AATT | 3 cut(s) | 117, 127, 152 |
| TatI | WGTACW | 1 cut(s) | 62 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TseI | GCWGC | 1 cut(s) | 94 |
| VpaK11BI | GGWCC | 1 cut(s) | 201 |
| XceI | RCATGY | 1 cut(s) | 176 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 185 |
| ZrmI | AGTACT | 1 cut(s) | 64 |
| Zsp2I | ATGCAT | 1 cut(s) | 174 |