Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000126.1

Orthogroup ID

OG0004858

Physical Location & Seq

Genomic Coordinates Forward (+)

309019 .. 313958

Gene Structure 4940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000126.1_g000065.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

atggcaacaaccgaaccgattgaactcgaattcaaaaggtacttctccggtggcgttgagcttcaaatgtccggtgaggcgcgtcgccttcacccttctctcaaggtacactattatcacactctcaactcctcccgacccacctctgattttcacagcacctttgattttctcactcagttcttgccattctcttctatcaaacccaattcccaatgctctataaactccaatgagcggcgtaaagtcactgttgggttatccaggatcataaagaaccaacagggctatgtactgaagggcttttccagaaccttctgcccattttttcttgtaaagattatgaaactgttctgttgtagagaaactgcatttgggttctttaaactagcctttagggatgataatcagcagactgtggagtcatgctgtgtggctgcacatgttttggcggccgaaaatctacggtttctggctcaagatgtggtttcgtgtgtgattgggaggattggcccgagtaggagtagggatttggtggggtttatgtggggagggcattgtgaatacgagtcggatttttcggttcttgatacactaatgagggggttcttgaatgcggaaatgggcgccgaggctttggaggttttgaggaggatgagggaggtgggagtgaggccgagtttgtcagcggttgcgattctgttcaggttgttgataagggttggtgattatggtagtgtgtggaaggtgtttagggatatgattagagaagggccttatccatgtaattatgtttttagtgcaatgattcttgggttttgtcaaaaagggttggttagagttggggagagtttgttacaggtgatgtggaaattccaatgtgaaccggatgtttttgcttataacattgtgatctatgcaaattgtgcgagagggcagacagctgatgcgcttgaatgggtggagttgatgattgcgaggggatgtaaaccgagcattgttacatttaatacagtcataagtgcattgtgtaaggagggaaatgtggtggaggcaaggaagctttttgatgatgtcccagacatgggtgtttatccgaataccataatttacaagctcatctactattctactttgtcaaattttaaatttctattattagatattcattttctgcttaaagtttctgttagtatcccgatggatcaaaaacttgaatccgaaagcagagtttgcgtcacgggagcttctggctttctggcatcttggcttattaagcgacttctcatgtcaggatatcatgtaactggaactgtcagagatccaggaaaccagaagaaattggcacatttgtggaggctggaaggagctaaagaaagactgagattggtgaaggctgatttagttgaagaaagtagctttgatgatgcaatcttcgggtgccatggtgtcttccactctgcttctcctgtacccaaactttcatctgatccaaagaaagaaatcctagaccccgctattgaaggcacgttgaatgtgcttcgttcatgtaagaagaatccatctctaaggcgtgtggttctcacctcatcttcttcagctgtaagggtgagagatggtgatgattttgaccccaatattccattggatgagtcatcttggagctctgtggaactctgccagaaactgcaggcaatgttgagaaagttgaggcagggtctcagcaatgctacccttctagtatggaattcgatactggtgtggatgatcctaggactcctacgcgctgagagggcagcattggatttctgcaaagcaaatgggatcgatttagtaaccgttctacccacattcgtcgttggacctagtttgccacctgatttatgttctactgcatctgatatacttggcctgctcaagggtgaaacagagaggttcaaattgcatggaagaatgggatatgttcacatcgatgatgttgcactttgccacatcctagtttatgagcacaaaagtgctcatggtcgatacatttgcaactcgacagtgcttgacaacaatgagttagcatccttgctatccacaagatatccttccatacctatccctgaaaggtttgagcaactggaaaggccacactatgatttcaacacctcaaagatgagggctctaggatttaagttcaagacagtccaagagatgtttgatgattgcattgccgctctggtggagcaaggccatctttctccattctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Epimerase UFD1

Protein Analysis

751

Amino Acids

84.59

Weight (kDa)

8.41

Isoelectric Point (pI)

36.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004858)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g25080
malus_domestica	MD02G1222500.v1.1 MD07G1092900.v1.1 MD07G1093100.v1.1
prunus_persica	Prupe.1G180300_v2.0.a1
pyrus_communis	pycom07g07630
rosa_chinensis	RchiOBHm_Chr4g0407101 RchiOBHm_Chr4g0407111 RchiOBHm_Chr7g0215291
rosa_laevigata	RLG00000002673 RLG00000008854
rosa_multiflora	Rmu_co8487181.1_g000001 Rmu_sc0002701.1_g000058 Rmu_ssc0000126.1_g000065
rosa_roxburghii	Rroxscaffold_3G00244320 Rroxscaffold_6G00393890
rosa_rugosa	Rorug07G0151900 Rorug07G0152000
rosa_samantha	Rh4AG142800 Rh4BG121000 Rh4CG149300 Rh4CG149400 Rh4DG124200 Rh7AG288500 Rh7AG288700 Rh7BG280700 Rh7CG308400 Rh7CG308500 Rh7DG292200
rosa_wichuraiana	Rw7G024670 Rw7G024680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	903
AasI	GACNNNNNNGTC	1 cut(s)	421
AccB1I	GGYRCC	2 cut(s)	626, 1440
AccBSI	CCGCTC	2 cut(s)	238, 2222
AccII	CGCG	2 cut(s)	82, 1785
AciI	CCGC	6 cut(s)	238, 452, 617, 689, 1515, 2220
AclWI	GGATC	6 cut(s)	275, 1212, 1316, 1484, 1762, 1832
AcoI	YGGCCR	1 cut(s)	453
AcsI	RAATTY	5 cut(s)	29, 872, 1141, 1148, 1747
AcuI	CTGAAG	2 cut(s)	317, 1581
AcyI	GRCGYC	1 cut(s)	627
AfaI	GTAC	4 cut(s)	41, 108, 294, 1473
AfiI	CCNNNNNNNGG	4 cut(s)	237, 1084, 1085, 1918
AflIII	ACRYGT	1 cut(s)	442
AjnI	CCWGG	2 cut(s)	263, 1324
AjuI	GAANNNNNNNTTGG	2 cut(s)	357, 389
AleI	CACNNNNGTG	2 cut(s)	1351, 2013
AluBI	AGCT	9 cut(s)	61, 944, 1063, 1117, 1247, 1370, 1419, 1601, 1665
AluI	AGCT	9 cut(s)	61, 944, 1063, 1117, 1247, 1370, 1419, 1601, 1665
Alw21I	GWGCWC	3 cut(s)	1667, 2010, 2020
Alw26I	GTCTC	1 cut(s)	1724
AlwI	GGATC	6 cut(s)	275, 1212, 1316, 1484, 1762, 1832
AlwNI	CAGNNNCTG	1 cut(s)	1687
Ama87I	CYCGRG	1 cut(s)	514
AoxI	GGCC	7 cut(s)	453, 511, 674, 773, 1909, 2132, 2236
ApeKI	GCWGC	2 cut(s)	437, 1796
ApoI	RAATTY	5 cut(s)	29, 872, 1141, 1148, 1747
Asp700I	GAANNNNTTC	1 cut(s)	350
AspA2I	CCTAGG	1 cut(s)	1771
AspLEI	GCGC	4 cut(s)	82, 629, 952, 1787
AspS9I	GGNCC	3 cut(s)	512, 773, 1862
AsuHPI	GGTGA	9 cut(s)	83, 86, 737, 874, 1402, 1576, 1621, 1631, 1934
AvaI	CYCGRG	1 cut(s)	514
AvaII	GGWCC	1 cut(s)	1862
AvrII	CCTAGG	1 cut(s)	1771
BaeI	ACNNNNGTAYC	2 cut(s)	1745, 1778
BanI	GGYRCC	2 cut(s)	626, 1440
BanII	GRGCYC	2 cut(s)	1667, 2170
BbsI	GAAGAC	1 cut(s)	1444
Bbv12I	GWGCWC	3 cut(s)	1667, 2010, 2020
BbvI	GCAGC	2 cut(s)	424, 1808
BccI	CCATC	4 cut(s)	1195, 1570, 1610, 2247
BcgI	CGANNNNNNTGC	4 cut(s)	1961, 1995, 2016, 2050
BciT130I	CCWGG	2 cut(s)	265, 1326
BciVI	GTATCC	1 cut(s)	1205
BcoDI	GTCTC	1 cut(s)	1724
BfaI	CTAG	8 cut(s)	389, 1508, 1739, 1772, 1866, 1997, 2171, 2254
BfmI	CTRYAG	1 cut(s)	1688
BfoI	RGCGCY	1 cut(s)	630
BfuI	GTATCC	1 cut(s)	1205
BisI	GCNGC	5 cut(s)	239, 438, 453, 1797, 2220
BlnI	CCTAGG	1 cut(s)	1771
BlsI	GCNGC	5 cut(s)	240, 439, 454, 1798, 2221
Bme1390I	CCNGG	2 cut(s)	265, 1326
Bme18I	GGWCC	1 cut(s)	1862
BmeT110I	CYCGRG	1 cut(s)	514
BmgT120I	GGNCC	3 cut(s)	512, 773, 1862
BmiI	GGNNCC	2 cut(s)	628, 1442
BmrFI	CCNGG	2 cut(s)	265, 1326
BmsI	GCATC	5 cut(s)	937, 1271, 1417, 1904, 2078
BpiI	GAAGAC	1 cut(s)	1444
BpuEI	CTTGAG	3 cut(s)	86, 462, 1901
Bsa29I	ATCGAT	2 cut(s)	1827, 1971
BsaBI	GATNNNNATC	1 cut(s)	405
BsaHI	GRCGYC	1 cut(s)	627
BsaI	GGTCTC	1 cut(s)	1724
BsaJI	CCNNGG	3 cut(s)	630, 1444, 1771
BsaWI	WCCGGW	3 cut(s)	47, 71, 886
BsaXI	ACNNNNNCTCC	2 cut(s)	839, 869
Bsc4I	CCNNNNNNNGG	4 cut(s)	237, 1084, 1085, 1918
Bse1I	ACTGG	3 cut(s)	1312, 1761, 2130
Bse3DI	GCAATG	4 cut(s)	810, 1701, 1732, 2214
Bse8I	GATNNNNATC	1 cut(s)	405
BseBI	CCWGG	2 cut(s)	265, 1326
BseCI	ATCGAT	2 cut(s)	1827, 1971
BseDI	CCNNGG	3 cut(s)	630, 1444, 1771
BseGI	GGATG	8 cut(s)	406, 660, 895, 989, 1654, 1770, 1992, 2069
BseJI	GATNNNNATC	1 cut(s)	405
BseLI	CCNNNNNNNGG	4 cut(s)	237, 1084, 1085, 1918
BseMI	GCAATG	4 cut(s)	810, 1701, 1732, 2214
BseMII	CTCAG	4 cut(s)	191, 1373, 1735, 1779
BseNI	ACTGG	3 cut(s)	1312, 1761, 2130
BseRI	GAGGAG	2 cut(s)	121, 664
BseX3I	CGGCCG	1 cut(s)	453
BseXI	GCAGC	2 cut(s)	424, 1808
BsgI	GTGCAG	1 cut(s)	423
Bsh1236I	CGCG	2 cut(s)	82, 1785
Bsh1285I	CGRYCG	1 cut(s)	456
BshFI	GGCC	7 cut(s)	455, 513, 676, 775, 1911, 2134, 2238
BshNI	GGYRCC	2 cut(s)	626, 1440
BshVI	ATCGAT	2 cut(s)	1827, 1971
BsiEI	CGRYCG	1 cut(s)	456
BsiHKAI	GWGCWC	3 cut(s)	1667, 2010, 2020
BsiHKCI	CYCGRG	1 cut(s)	514
BsiSI	CCGG	3 cut(s)	48, 72, 887
BslFI	GGGAC	1 cut(s)	1061
BslI	CCNNNNNNNGG	4 cut(s)	237, 1084, 1085, 1918
BsmAI	GTCTC	1 cut(s)	1724
BsmFI	GGGAC	1 cut(s)	1061
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	7 cut(s)	455, 513, 676, 775, 1911, 2134, 2238
Bso31I	GGTCTC	1 cut(s)	1724
BsoBI	CYCGRG	1 cut(s)	514
Bsp1286I	GDGCHC	4 cut(s)	1667, 2010, 2020, 2170
Bsp143I	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
Bsp19I	CCATGG	1 cut(s)	1444
BspACI	CCGC	6 cut(s)	238, 452, 617, 689, 1515, 2220
BspANI	GGCC	7 cut(s)	455, 513, 676, 775, 1911, 2134, 2238
BspCNI	CTCAG	4 cut(s)	190, 1374, 1734, 1780
BspDI	ATCGAT	2 cut(s)	1827, 1971
BspFNI	CGCG	2 cut(s)	82, 1785
BspLI	GGNNCC	2 cut(s)	628, 1442
BspMAI	CTGCAG	1 cut(s)	1692
BspPI	GGATC	6 cut(s)	275, 1212, 1316, 1484, 1762, 1832
BspT107I	GGYRCC	2 cut(s)	626, 1440
BspTNI	GGTCTC	1 cut(s)	1724
BsrBI	CCGCTC	2 cut(s)	238, 2222
BsrDI	GCAATG	4 cut(s)	810, 1701, 1732, 2214
BsrI	ACTGG	3 cut(s)	1312, 1761, 2130
BssECI	CCNNGG	3 cut(s)	630, 1444, 1771
BssMI	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
BssNI	GRCGYC	1 cut(s)	627
BssT1I	CCWWGG	2 cut(s)	1444, 1771
Bst2UI	CCWGG	2 cut(s)	265, 1326
Bst4CI	ACNGT	9 cut(s)	253, 351, 418, 468, 1015, 1315, 1840, 2047, 2191
Bst6I	CTCTTC	1 cut(s)	199
BstACI	GRCGYC	1 cut(s)	627
BstAPI	GCANNNNNTGC	2 cut(s)	926, 1233
BstC8I	GCNNGC	2 cut(s)	1692, 1913
BstDEI	CTNAG	5 cut(s)	177, 1382, 1568, 1721, 1788
BstDSI	CCRYGG	1 cut(s)	1444
BstENI	CCTNNNNNAGG	1 cut(s)	1916
BstF5I	GGATG	8 cut(s)	406, 660, 895, 989, 1654, 1770, 1992, 2069
BstFNI	CGCG	2 cut(s)	82, 1785
BstH2I	RGCGCY	1 cut(s)	630
BstHHI	GCGC	4 cut(s)	82, 629, 952, 1787
BstKTI	GATC	7 cut(s)	270, 915, 1207, 1324, 1492, 1770, 1827
BstMAI	GTCTC	1 cut(s)	1724
BstMBI	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
BstMCI	CGRYCG	1 cut(s)	456
BstMWI	GCNNNNNNNGC	4 cut(s)	926, 1233, 1276, 1793
BstNI	CCWGG	2 cut(s)	265, 1326
BstNSI	RCATGY	1 cut(s)	446
BstSCI	CCNGG	2 cut(s)	263, 1324
BstSFI	CTRYAG	1 cut(s)	1688
BstUI	CGCG	2 cut(s)	82, 1785
BstV1I	GCAGC	2 cut(s)	424, 1808
BstV2I	GAAGAC	1 cut(s)	1444
BstX2I	RGATCY	1 cut(s)	1321
BstYI	RGATCY	1 cut(s)	1321
BstZI	CGGCCG	1 cut(s)	453
Bsu15I	ATCGAT	2 cut(s)	1827, 1971
BsuI	GTATCC	1 cut(s)	1205
BsuRI	GGCC	7 cut(s)	455, 513, 676, 775, 1911, 2134, 2238
BsuTUI	ATCGAT	2 cut(s)	1827, 1971
BtgI	CCRYGG	1 cut(s)	1444
BtsCI	GGATG	8 cut(s)	406, 660, 895, 989, 1654, 1770, 1992, 2069
BtsIMutI	CAGTG	2 cut(s)	249, 2052
Cac8I	GCNNGC	2 cut(s)	1692, 1913
CaiI	CAGNNNCTG	1 cut(s)	1687
CfoI	GCGC	4 cut(s)	82, 629, 952, 1787
Cfr13I	GGNCC	3 cut(s)	512, 773, 1862
ClaI	ATCGAT	2 cut(s)	1827, 1971
CseI	GACGC	2 cut(s)	71, 1225
Csp6I	GTAC	4 cut(s)	40, 107, 293, 1472
CviQI	GTAC	4 cut(s)	40, 107, 293, 1472
DdeI	CTNAG	5 cut(s)	177, 1382, 1568, 1721, 1788
DinI	GGCGCC	1 cut(s)	628
DpnI	GATC	7 cut(s)	269, 914, 1206, 1323, 1491, 1769, 1826
DpnII	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
DraI	TTTAAA	2 cut(s)	385, 1147
DrdI	GACNNNNNNGTC	1 cut(s)	421
DseDI	GACNNNNNNGTC	1 cut(s)	421
EaeI	YGGCCR	1 cut(s)	453
EagI	CGGCCG	1 cut(s)	453
Eam1104I	CTCTTC	1 cut(s)	199
EarI	CTCTTC	1 cut(s)	199
Ecl136II	GAGCTC	1 cut(s)	1665
EclXI	CGGCCG	1 cut(s)	453
Eco130I	CCWWGG	2 cut(s)	1444, 1771
Eco24I	GRGCYC	2 cut(s)	1667, 2170
Eco31I	GGTCTC	1 cut(s)	1724
Eco32I	GATATC	2 cut(s)	1298, 2090
Eco47I	GGWCC	1 cut(s)	1862
Eco52I	CGGCCG	1 cut(s)	453
Eco53kI	GAGCTC	1 cut(s)	1665
Eco57I	CTGAAG	2 cut(s)	317, 1581
Eco88I	CYCGRG	1 cut(s)	514
EcoICRI	GAGCTC	1 cut(s)	1665
EcoNI	CCTNNNNNAGG	1 cut(s)	1916
EcoO109I	RGGNCCY	1 cut(s)	773
EcoRI	GAATTC	2 cut(s)	29, 1747
EcoRII	CCWGG	2 cut(s)	263, 1324
EcoRV	GATATC	2 cut(s)	1298, 2090
EcoT14I	CCWWGG	2 cut(s)	1444, 1771
EcoT38I	GRGCYC	2 cut(s)	1667, 2170
EgeI	GGCGCC	1 cut(s)	628
EheI	GGCGCC	1 cut(s)	628
ErhI	CCWWGG	2 cut(s)	1444, 1771
FalI	AAGNNNNNCTT	3 cut(s)	2077, 2109, 2226
FaqI	GGGAC	1 cut(s)	1061
FauI	CCCGC	1 cut(s)	1522
Fnu4HI	GCNGC	5 cut(s)	239, 438, 453, 1797, 2220
FokI	GGATG	8 cut(s)	413, 667, 902, 996, 1661, 1777, 1979, 2056
FriOI	GRGCYC	2 cut(s)	1667, 2170
Fsp4HI	GCNGC	5 cut(s)	239, 438, 453, 1797, 2220
FspBI	CTAG	8 cut(s)	389, 1508, 1739, 1772, 1866, 1997, 2171, 2254
GlaI	GCGC	4 cut(s)	81, 628, 951, 1786
GluI	GCNGC	5 cut(s)	239, 438, 453, 1797, 2220
HaeII	RGCGCY	1 cut(s)	630
HaeIII	GGCC	7 cut(s)	455, 513, 676, 775, 1911, 2134, 2238
HapII	CCGG	3 cut(s)	48, 72, 887
HgaI	GACGC	2 cut(s)	71, 1225
HhaI	GCGC	4 cut(s)	82, 629, 952, 1787
Hin1I	GRCGYC	1 cut(s)	627
Hin6I	GCGC	4 cut(s)	80, 627, 950, 1785
HinP1I	GCGC	4 cut(s)	80, 627, 950, 1785
HindIII	AAGCTT	1 cut(s)	1061
HinfI	GANTC	8 cut(s)	422, 569, 697, 808, 1217, 1558, 1652, 1776
HpaII	CCGG	3 cut(s)	48, 72, 887
HphI	GGTGA	9 cut(s)	83, 86, 737, 874, 1402, 1576, 1621, 1631, 1934
Hpy166II	GTNNAC	4 cut(s)	109, 884, 989, 1966
Hpy188I	TCNGA	7 cut(s)	148, 574, 1098, 1222, 1319, 1489, 1900
Hpy188III	TCNNGA	8 cut(s)	135, 309, 479, 587, 610, 1198, 1293, 2185
Hpy8I	GTNNAC	4 cut(s)	109, 884, 989, 1966
Hpy99I	CGWCG	2 cut(s)	87, 1859
HpyCH4III	ACNGT	9 cut(s)	253, 351, 418, 468, 1015, 1315, 1840, 2047, 2191
HpyCH4IV	ACGT	1 cut(s)	1529
HpyF10VI	GCNNNNNNNGC	4 cut(s)	926, 1233, 1276, 1793
HpyF3I	CTNAG	5 cut(s)	177, 1382, 1568, 1721, 1788
HpySE526I	ACGT	1 cut(s)	1529
Hsp92I	GRCGYC	1 cut(s)	627
HspAI	GCGC	4 cut(s)	80, 627, 950, 1785
KasI	GGCGCC	1 cut(s)	626
Kzo9I	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
LmnI	GCTCC	4 cut(s)	1244, 1367, 1662, 2230
Lsp1109I	GCAGC	2 cut(s)	424, 1808
LweI	GCATC	5 cut(s)	937, 1271, 1417, 1904, 2078
MaeI	CTAG	8 cut(s)	389, 1508, 1739, 1772, 1866, 1997, 2171, 2254
MaeII	ACGT	1 cut(s)	1529
MaeIII	GTNAC	6 cut(s)	247, 855, 1000, 1237, 1303, 1834
MalI	GATC	7 cut(s)	269, 914, 1206, 1323, 1491, 1769, 1826
MbiI	CCGCTC	2 cut(s)	238, 2222
MboI	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
MboII	GAAGA	9 cut(s)	186, 1348, 1421, 1426, 1444, 1567, 1584, 1587, 1962
MflI	RGATCY	1 cut(s)	1321
MhlI	GDGCHC	4 cut(s)	1667, 2010, 2020, 2170
Mly113I	GGCGCC	1 cut(s)	627
MlyI	GAGTC	4 cut(s)	431, 578, 1661, 1770
MmeI	TCCRAC	2 cut(s)	552, 1840
MroXI	GAANNNNTTC	1 cut(s)	350
MseI	TTAA	6 cut(s)	384, 1008, 1146, 1179, 1275, 2178
MslI	CAYNNNNRTG	3 cut(s)	1351, 1971, 2013
MspA1I	CMGCKG	3 cut(s)	689, 944, 1601
MspI	CCGG	3 cut(s)	48, 72, 887
MspR9I	CCNGG	2 cut(s)	265, 1326
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	2 cut(s)	265, 1326
MvnI	CGCG	2 cut(s)	82, 1785
MwoI	GCNNNNNNNGC	4 cut(s)	926, 1233, 1276, 1793
NarI	GGCGCC	1 cut(s)	627
NcoI	CCATGG	1 cut(s)	1444
NdeII	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
NlaIV	GGNNCC	2 cut(s)	628, 1442
NmeAIII	GCCGAG	2 cut(s)	655, 702
NmuCI	GTSAC	2 cut(s)	247, 1237
NspI	RCATGY	1 cut(s)	446
OliI	CACNNNNGTG	2 cut(s)	1351, 2013
PciI	ACATGT	1 cut(s)	442
PctI	GAATGC	1 cut(s)	619
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	4 cut(s)	697, 808, 1217, 1558
PfoI	TCCNGGA	2 cut(s)	263, 1324
PkrI	GCNGC	5 cut(s)	240, 439, 454, 1798, 2221
PleI	GAGTC	4 cut(s)	430, 577, 1660, 1770
PluTI	GGCGCC	1 cut(s)	630
PpsI	GAGTC	4 cut(s)	430, 577, 1660, 1770
PscI	ACATGT	1 cut(s)	442
PsiI	TTATAA	1 cut(s)	903
Psp124BI	GAGCTC	1 cut(s)	1667
Psp6I	CCWGG	2 cut(s)	263, 1324
PspGI	CCWGG	2 cut(s)	263, 1324
PspN4I	GGNNCC	2 cut(s)	628, 1442
PspPI	GGNCC	3 cut(s)	512, 773, 1862
PstI	CTGCAG	1 cut(s)	1692
PstNI	CAGNNNCTG	1 cut(s)	1687
PsuI	RGATCY	1 cut(s)	1321
PvuII	CAGCTG	2 cut(s)	944, 1601
RsaI	GTAC	4 cut(s)	41, 108, 294, 1473
RsaNI	GTAC	4 cut(s)	40, 107, 293, 1472
RseI	CAYNNNNRTG	3 cut(s)	1351, 1971, 2013
SacI	GAGCTC	1 cut(s)	1667
SaqAI	TTAA	6 cut(s)	384, 1008, 1146, 1179, 1275, 2178
SatI	GCNGC	5 cut(s)	239, 438, 453, 1797, 2220
Sau3AI	GATC	7 cut(s)	267, 912, 1204, 1321, 1489, 1767, 1824
Sau96I	GGNCC	3 cut(s)	512, 773, 1862
SchI	GAGTC	4 cut(s)	431, 578, 1661, 1770
ScrFI	CCNGG	2 cut(s)	265, 1326
SduI	GDGCHC	4 cut(s)	1667, 2010, 2020, 2170
SfaNI	GCATC	5 cut(s)	937, 1271, 1417, 1904, 2078
SfcI	CTRYAG	1 cut(s)	1688
SfoI	GGCGCC	1 cut(s)	628
SinI	GGWCC	1 cut(s)	1862
SmiMI	CAYNNNNRTG	3 cut(s)	1351, 1971, 2013
SmlI	CTYRAG	3 cut(s)	101, 477, 1916
SmoI	CTYRAG	3 cut(s)	101, 477, 1916
SsiI	CCGC	6 cut(s)	238, 452, 617, 689, 1515, 2220
SspDI	GGCGCC	1 cut(s)	626
SspI	AATATT	1 cut(s)	1639
SspMI	CTAG	8 cut(s)	389, 1508, 1739, 1772, 1866, 1997, 2171, 2254
SstI	GAGCTC	1 cut(s)	1667
StyD4I	CCNGG	2 cut(s)	263, 1324
StyI	CCWWGG	2 cut(s)	1444, 1771
TaaI	ACNGT	9 cut(s)	253, 351, 418, 468, 1015, 1315, 1840, 2047, 2191
TaiI	ACGT	1 cut(s)	1532
TaqI	TCGA	6 cut(s)	27, 1751, 1827, 1971, 2026, 2042
TatI	WGTACW	1 cut(s)	292
TauI	GCSGC	3 cut(s)	241, 455, 2222
TfiI	GAWTC	4 cut(s)	697, 808, 1217, 1558
Tru1I	TTAA	6 cut(s)	384, 1008, 1146, 1179, 1275, 2178
Tru9I	TTAA	6 cut(s)	384, 1008, 1146, 1179, 1275, 2178
TscAI	CASTG	2 cut(s)	256, 2052
TseFI	GTSAC	2 cut(s)	247, 1237
TseI	GCWGC	2 cut(s)	437, 1796
Tsp45I	GTSAC	2 cut(s)	247, 1237
TspDTI	ATGAA	4 cut(s)	359, 1157, 1473, 1536
TspRI	CASTG	2 cut(s)	256, 2052
VpaK11BI	GGWCC	1 cut(s)	1862
XagI	CCTNNNNNAGG	1 cut(s)	1916
XapI	RAATTY	5 cut(s)	29, 872, 1141, 1148, 1747
XceI	RCATGY	1 cut(s)	446
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1642
XmaJI	CCTAGG	1 cut(s)	1771
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	8 cut(s)	389, 1508, 1739, 1772, 1866, 1997, 2171, 2254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.