RchiOBHm_Chr4g0407111

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0004858
Physical Location & Seq
Forward (+)
29250074 .. 29255028
4955 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37838

Sequence Viewer

Length: 2037 bp
ATGGGCGCCGAGGCTTTGGAGGTTTTGAGGAGGATGAGGGAGGTGGGAGTGAGGCCGAGTTTGTCTGCGGTTGCGATTCTGTTCAGGTTGTTGATAAGGGTTGGCGATTATGGTAGTGTGTGGAAGGTGTTTAGGGATATGATTAGAGAAGGGCCTTATCCATGTAATTATGTTTTTAGTGCAATGATTCTTGGATTTTGTCGAAAAGGGTTGGTTAGAGTTGGGGAGAGTTTGTTACAGGTGATGTGGAAATTCCAATGTGAACCAGATGTTTTTGCTTATAACATTGTGATCTATGCAAATTGTGCGAGAGGGCAGACAGCTGATGCGCTTGAATGGGTGGAGTTGATGATTGCGAGGGGATGTAAACCTAGCATTGTTACATTTAATACAGTCATAAGTGCATTGTGTAAGGAAGGAAATGTGGTGGAGGCAAGGAAGCTTTTTGATGACGTCCCAGACATGGGTGTTTATCCGAATACCATAATGTACAATACCATGATGGATGGGTATGTTAAGTCAAGGGAGATTGATCAGGCTAACATGCTTTTTGAAGAAATGAGGAAGAAGAGCATTTCTCCAGATGGCATAACTTTCAATATCTTGATTGGAGGGCATTACAAGTATGGAAGCGAAGATGATGGAGACAGGTTGTTGCGGGATTTATCTGTGTCAGGATTACTTCCAGATTCTTCATTGTATGATATCTATGTTTCTGTGTTGTGTTGGGCAGATCGGTTGGACGATGCCATGGCAGTTTTAGAGGATATGCTTGAAAGAGGATTCTCTCTAAGTGTGGTCGCTTTCAACTCTGTTATTGCTGCTTGTAGCAGAGTAGGGTTGGAAGAAAAAGCATATAAGGCCTTTAACTTCATGATTTCATTTGGTATAACTCCTTCATCTTCTACGTGTAGTTCTTTGCTTATGGGTTTATCTAAGAAGGGTTACTTGCAAGAAGCCGGAGAGCTTTTGTGTAAAATGATGGAGAAGGGGTTTCCTATCAGAAAAGCTGCTTTTACGGTGCTTTTGGATGGGTACTTTAGGATGGGTGATTTAGATGGGGCACAAAGTTTGTGGAATGAGATGGAAGGAAGAGGCATATCTCCTGATGTTGTGGCCTTTTCAGCATTTATCAATGGACTATCTAAAGCCGGTTTAATGGAAGAAGCATATGATATGTTTCAAGAAATGTTAAGGAAAGGGTTTGTGCCCAATAATTTTGTCTATAATTCATTGATTGGTGGGTTTTGCTACTGTGGTAAGTTGAGTGATGCACTGAGGTTGGAGAGAGAGATGAGGCAAAGGGGTCTTATTCCGGATATTTTTACCACCAATATGATCATTCATGGGTTCTGTAGACAGGGGAGGATGAAGTCAGCAATTAATACATTTATGAACATGTTCCAAACTGGGTTAACCCCAGATATCGTCACTTACAATACATTAATTGGTGGTTATTGTAAAGCATTTGACATGGTTAGGGCAGATGAATTTCTGTATAAAATGTACGCTAGTGGATGGGAACCAGATATCACAACCTATAATATACTGATGCATGGTTTTTGTAGTAGCCGAAAGATAAATCGGGCTGTGAAGATTCTGGATGAGCTTGTATTGAGAGGTGTTGTTCCAGACACAGTAACATACAACACTATGATGAATGGTGTTTGTGTTGACATACTGGATCGTGCTATGATTTTAACCGCTAAATTGCTTAAGTTGGCGTTTCTTCCAAATGTTGTTACAGCCAATGTATTGTTGTCTCAGTTCCGCAGGCAGGGGATGCCTGAGAAGGCCCTAATGTGGGGTCAGAAGTTAAGTCAGTTTTCCTTTTGTTTTGATGAAATTACCTACAAAATATTGGACAGAGCCTATCATAATATGCAAGAAGATCCTGCAATTTCAAGTGCAACACCTGAGAAAAGCCTCTTCTTGGATTTCCTCATGTACATTACGTATGATTATTTATGTAAAAATAAACCTTGCAGAGATGTAAGACAAAACCCTCTTAAAGTAATTGGTCTTAGTGGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 map00500
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

678

Amino Acids

76.49

Weight (kDa)

6.25

Isoelectric Point (pI)

30.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 54 - 102 1.5e-06 PPR repeat family
PPR_3 PF13812 79 - 136 1.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 89 - 133 1.5e-09 PPR repeat family
PPR_1 PF12854 120 - 151 5.9e-12 PPR repeat
PPR_2 PF13041 124 - 161 2.2e-09 PPR repeat family
PPR PF01535 127 - 157 6.4e-07 PPR repeat
PPR_3 PF13812 147 - 204 1.8e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 155 - 188 2.6e-06 PPR repeat
PPR_2 PF13041 159 - 207 9.7e-17 PPR repeat family
PPR PF01535 162 - 191 3e-07 PPR repeat
PPR_long PF17177 248 - 386 4.5e-09 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 250 - 361 5.5e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 265 - 313 7.1e-08 PPR repeat family
PPR PF01535 338 - 367 8.4e-06 PPR repeat
PPR_2 PF13041 338 - 383 1.4e-11 PPR repeat family
PPR_1 PF12854 365 - 397 7.4e-09 PPR repeat
PPR_2 PF13041 369 - 417 4.6e-15 PPR repeat family
PPR PF01535 372 - 402 7.4e-08 PPR repeat
PPR_3 PF13812 393 - 448 6e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 400 - 433 2.5e-09 PPR repeat
PPR_2 PF13041 404 - 453 6e-14 PPR repeat family
PPR PF01535 408 - 437 5.5e-06 PPR repeat
PPR_3 PF13812 428 - 486 9.8e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 435 - 464 5.6e-07 PPR repeat
PPR_2 PF13041 439 - 488 2.3e-16 PPR repeat family
PPR_1 PF12854 471 - 502 6.4e-08 PPR repeat
PPR_2 PF13041 474 - 522 1.2e-15 PPR repeat family
PPR_3 PF13812 500 - 554 2.8e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 506 - 536 4.3e-08 PPR repeat
PPR_2 PF13041 509 - 557 4.4e-16 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 282
AatII GACGTC 1 cut(s) 456
AccB1I GGYRCC 1 cut(s) 5
AccI GTMKAC 1 cut(s) 1357
AccIII TCCGGA 1 cut(s) 1315
AciI CCGC 4 cut(s) 68, 658, 1704, 1771
AclWI GGATC 2 cut(s) 1692, 1886
AcsI RAATTY 2 cut(s) 251, 1490
AcyI GRCGYC 2 cut(s) 6, 453
AfaI GTAC 4 cut(s) 491, 1037, 1508, 1949
AfiI CCNNNNNNNGG 6 cut(s) 463, 464, 1777, 1803, 1804, 1933
AflII CTTAAG 1 cut(s) 1715
AflIII ACRYGT 2 cut(s) 908, 1398
AgsI TTSAA 7 cut(s) 335, 554, 598, 776, 808, 1184, 1905
AluBI AGCT 5 cut(s) 323, 442, 967, 1010, 1609
AluI AGCT 5 cut(s) 323, 442, 967, 1010, 1609
Alw26I GTCTC 2 cut(s) 639, 1767
AlwI GGATC 2 cut(s) 1692, 1886
Aor13HI TCCGGA 1 cut(s) 1315
AoxI GGCC 6 cut(s) 53, 152, 861, 1116, 1794, 2029
ApeKI GCWGC 2 cut(s) 821, 1010
ApoI RAATTY 2 cut(s) 251, 1490
AseI ATTAAT 2 cut(s) 1383, 1445
Asp700I GAANNNNTTC 1 cut(s) 1400
AspLEI GCGC 2 cut(s) 8, 331
AspS9I GGNCC 3 cut(s) 152, 1795, 2030
AsuHPI GGTGA 2 cut(s) 253, 1061
BaeGI GKGCMC 2 cut(s) 1066, 1212
BanI GGYRCC 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 880, 912
BbvI GCAGC 2 cut(s) 808, 997
BclI TGATCA 2 cut(s) 532, 1338
BcoDI GTCTC 2 cut(s) 639, 1767
BfaI CTAG 2 cut(s) 372, 1512
BfmI CTRYAG 1 cut(s) 1354
BfoI RGCGCY 1 cut(s) 9
BfrI CTTAAG 1 cut(s) 1715
BisI GCNGC 2 cut(s) 822, 1011
BlsI GCNGC 2 cut(s) 823, 1012
BmgT120I GGNCC 3 cut(s) 152, 1795, 2030
BmiI GGNNCC 3 cut(s) 7, 1524, 2032
BmrI ACTGGG 1 cut(s) 1419
BmsI GCATC 5 cut(s) 316, 736, 1261, 1542, 1773
BmuI ACTGGG 1 cut(s) 1419
BplI GAGNNNNNCTC 2 cut(s) 562, 594
BpmI CTGGAG 1 cut(s) 564
BsaAI YACGTR 2 cut(s) 909, 1956
BsaHI GRCGYC 2 cut(s) 6, 453
BsaJI CCNNGG 2 cut(s) 9, 750
BsaWI WCCGGW 1 cut(s) 1315
BsaXI ACNNNNNCTCC 4 cut(s) 218, 248, 977, 1007
Bsc4I CCNNNNNNNGG 6 cut(s) 463, 464, 1777, 1803, 1804, 1933
Bse118I RCCGGY 1 cut(s) 1151
Bse1I ACTGG 2 cut(s) 1414, 1686
Bse3DI GCAATG 1 cut(s) 189
BseAI TCCGGA 1 cut(s) 1315
BseDI CCNNGG 2 cut(s) 9, 750
BseGI GGATG 9 cut(s) 39, 368, 511, 1036, 1050, 1374, 1523, 1609, 1788
BseLI CCNNNNNNNGG 6 cut(s) 463, 464, 1777, 1803, 1804, 1933
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 4 cut(s) 1268, 1778, 1779, 1908
BseNI ACTGG 2 cut(s) 1414, 1686
BseRI GAGGAG 1 cut(s) 43
BseSI GKGCMC 2 cut(s) 1066, 1212
BseXI GCAGC 2 cut(s) 808, 997
BshFI GGCC 6 cut(s) 55, 154, 863, 1118, 1796, 2031
BshNI GGYRCC 1 cut(s) 5
BsiSI CCGG 3 cut(s) 960, 1152, 1316
BslFI GGGAC 1 cut(s) 440
BslI CCNNNNNNNGG 6 cut(s) 463, 464, 1777, 1803, 1804, 1933
BsmAI GTCTC 2 cut(s) 639, 1767
BsmFI GGGAC 1 cut(s) 440
BsnI GGCC 6 cut(s) 55, 154, 863, 1118, 1796, 2031
Bsp1286I GDGCHC 2 cut(s) 1066, 1212
Bsp13I TCCGGA 1 cut(s) 1315
Bsp1407I TGTACA 2 cut(s) 489, 1947
Bsp143I GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
Bsp19I CCATGG 1 cut(s) 750
BspACI CCGC 4 cut(s) 68, 658, 1704, 1771
BspANI GGCC 6 cut(s) 55, 154, 863, 1118, 1796, 2031
BspCNI CTCAG 4 cut(s) 1269, 1777, 1780, 1909
BspEI TCCGGA 1 cut(s) 1315
BspHI TCATGA 1 cut(s) 873
BspLI GGNNCC 3 cut(s) 7, 1524, 2032
BspPI GGATC 2 cut(s) 1692, 1886
BspQI GCTCTTC 1 cut(s) 563
BspT107I GGYRCC 1 cut(s) 5
BspTI CTTAAG 1 cut(s) 1715
BsrDI GCAATG 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 1151
BsrGI TGTACA 2 cut(s) 489, 1947
BsrI ACTGG 2 cut(s) 1414, 1686
BssAI RCCGGY 1 cut(s) 1151
BssECI CCNNGG 2 cut(s) 9, 750
BssMI GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
BssNI GRCGYC 2 cut(s) 6, 453
BssT1I CCWWGG 1 cut(s) 750
Bst4CI ACNGT 4 cut(s) 394, 1021, 1256, 1639
Bst6I CTCTTC 3 cut(s) 563, 1087, 1934
BstACI GRCGYC 2 cut(s) 6, 453
BstAFI CTTAAG 1 cut(s) 1715
BstAPI GCANNNNNTGC 2 cut(s) 305, 1783
BstAUI TGTACA 2 cut(s) 489, 1947
BstBAI YACGTR 2 cut(s) 909, 1956
BstC8I GCNNGC 1 cut(s) 1775
BstDEI CTNAG 7 cut(s) 791, 936, 1277, 1764, 1788, 1917, 2024
BstDSI CCRYGG 1 cut(s) 750
BstF5I GGATG 9 cut(s) 39, 368, 511, 1036, 1050, 1374, 1523, 1609, 1788
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 2 cut(s) 8, 331
BstKTI GATC 6 cut(s) 294, 535, 736, 1341, 1687, 1894
BstMAI GTCTC 2 cut(s) 639, 1767
BstMBI GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
BstMWI GCNNNNNNNGC 4 cut(s) 305, 860, 1124, 1783
BstNSI RCATGY 2 cut(s) 547, 1402
BstSFI CTRYAG 1 cut(s) 1354
BstSLI GKGCMC 2 cut(s) 1066, 1212
BstSNI TACGTA 1 cut(s) 1956
BstV1I GCAGC 2 cut(s) 808, 997
BstX2I RGATCY 1 cut(s) 1891
BstYI RGATCY 1 cut(s) 1891
BsuRI GGCC 6 cut(s) 55, 154, 863, 1118, 1796, 2031
BtgI CCRYGG 1 cut(s) 750
BtsCI GGATG 9 cut(s) 39, 368, 511, 1036, 1050, 1374, 1523, 1609, 1788
BtsIMutI CAGTG 1 cut(s) 1274
Cac8I GCNNGC 1 cut(s) 1775
CciI TCATGA 1 cut(s) 873
CfoI GCGC 2 cut(s) 8, 331
Cfr10I RCCGGY 1 cut(s) 1151
Cfr13I GGNCC 3 cut(s) 152, 1795, 2030
Csp6I GTAC 4 cut(s) 490, 1036, 1507, 1948
CspCI CAANNNNNGTGG 2 cut(s) 1055, 1090
CviQI GTAC 4 cut(s) 490, 1036, 1507, 1948
DdeI CTNAG 7 cut(s) 791, 936, 1277, 1764, 1788, 1917, 2024
DinI GGCGCC 1 cut(s) 7
DpnI GATC 6 cut(s) 293, 534, 735, 1340, 1686, 1893
DpnII GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
Eam1104I CTCTTC 3 cut(s) 563, 1087, 1934
EarI CTCTTC 3 cut(s) 563, 1087, 1934
Eco105I TACGTA 1 cut(s) 1956
Eco130I CCWWGG 1 cut(s) 750
Eco147I AGGCCT 1 cut(s) 863
Eco32I GATATC 3 cut(s) 706, 1426, 1531
EcoO109I RGGNCCY 2 cut(s) 152, 1795
EcoRV GATATC 3 cut(s) 706, 1426, 1531
EcoT14I CCWWGG 1 cut(s) 750
EcoT22I ATGCAT 1 cut(s) 1557
EgeI GGCGCC 1 cut(s) 7
EheI GGCGCC 1 cut(s) 7
ErhI CCWWGG 1 cut(s) 750
FalI AAGNNNNNCTT 2 cut(s) 932, 964
FaqI GGGAC 1 cut(s) 440
FauI CCCGC 1 cut(s) 651
FauNDI CATATG 1 cut(s) 1171
FbaI TGATCA 2 cut(s) 532, 1338
FblI GTMKAC 1 cut(s) 1357
Fnu4HI GCNGC 2 cut(s) 822, 1011
FokI GGATG 9 cut(s) 46, 375, 518, 1043, 1057, 1381, 1530, 1616, 1795
Fsp4HI GCNGC 2 cut(s) 822, 1011
FspBI CTAG 2 cut(s) 372, 1512
GlaI GCGC 2 cut(s) 7, 330
GluI GCNGC 2 cut(s) 822, 1011
GsuI CTGGAG 1 cut(s) 564
HaeII RGCGCY 1 cut(s) 9
HaeIII GGCC 6 cut(s) 55, 154, 863, 1118, 1796, 2031
HapII CCGG 3 cut(s) 960, 1152, 1316
HhaI GCGC 2 cut(s) 8, 331
Hin1I GRCGYC 2 cut(s) 6, 453
Hin6I GCGC 2 cut(s) 6, 329
HinP1I GCGC 2 cut(s) 6, 329
HincII GTYRAC 2 cut(s) 1416, 1675
HindII GTYRAC 2 cut(s) 1416, 1675
HindIII AAGCTT 1 cut(s) 440
HinfI GANTC 5 cut(s) 76, 187, 689, 783, 1597
HpaI GTTAAC 1 cut(s) 1416
HpaII CCGG 3 cut(s) 960, 1152, 1316
HphI GGTGA 2 cut(s) 253, 1061
Hpy166II GTNNAC 5 cut(s) 263, 368, 1358, 1416, 1675
Hpy188I TCNGA 3 cut(s) 477, 1004, 1812
Hpy8I GTNNAC 5 cut(s) 263, 368, 1358, 1416, 1675
HpyAV CCTTC 8 cut(s) 118, 143, 410, 906, 934, 982, 1082, 1786
HpyCH4III ACNGT 4 cut(s) 394, 1021, 1256, 1639
HpyCH4IV ACGT 3 cut(s) 453, 908, 1955
HpyF10VI GCNNNNNNNGC 4 cut(s) 305, 860, 1124, 1783
HpyF3I CTNAG 7 cut(s) 791, 936, 1277, 1764, 1788, 1917, 2024
HpySE526I ACGT 3 cut(s) 453, 908, 1955
Hsp92I GRCGYC 2 cut(s) 6, 453
HspAI GCGC 2 cut(s) 6, 329
KasI GGCGCC 1 cut(s) 5
Kpn2I TCCGGA 1 cut(s) 1315
Ksp22I TGATCA 2 cut(s) 532, 1338
KspAI GTTAAC 1 cut(s) 1416
Kzo9I GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
LguI GCTCTTC 1 cut(s) 563
Lsp1109I GCAGC 2 cut(s) 808, 997
LweI GCATC 5 cut(s) 316, 736, 1261, 1542, 1773
MaeI CTAG 2 cut(s) 372, 1512
MaeII ACGT 3 cut(s) 453, 908, 1955
MaeIII GTNAC 6 cut(s) 234, 379, 944, 1429, 1639, 1741
MalI GATC 6 cut(s) 293, 534, 735, 1340, 1686, 1893
MboI GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
MflI RGATCY 1 cut(s) 1891
MhlI GDGCHC 2 cut(s) 1066, 1212
Mly113I GGCGCC 1 cut(s) 6
MmeI TCCRAC 3 cut(s) 720, 822, 1263
Mph1103I ATGCAT 1 cut(s) 1557
MroI TCCGGA 1 cut(s) 1315
MroXI GAANNNNTTC 1 cut(s) 1400
MslI CAYNNNNRTG 2 cut(s) 1334, 1655
MspA1I CMGCKG 1 cut(s) 323
MspCI CTTAAG 1 cut(s) 1715
MspI CCGG 3 cut(s) 960, 1152, 1316
MwoI GCNNNNNNNGC 4 cut(s) 305, 860, 1124, 1783
NarI GGCGCC 1 cut(s) 6
NcoI CCATGG 1 cut(s) 750
NdeI CATATG 1 cut(s) 1171
NdeII GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
NlaIV GGNNCC 3 cut(s) 7, 1524, 2032
NmeAIII GCCGAG 2 cut(s) 34, 81
NmuCI GTSAC 1 cut(s) 1429
NsiI ATGCAT 1 cut(s) 1557
NspI RCATGY 2 cut(s) 547, 1402
PagI TCATGA 1 cut(s) 873
PceI AGGCCT 1 cut(s) 863
PciI ACATGT 1 cut(s) 1398
PciSI GCTCTTC 1 cut(s) 563
PdmI GAANNNNTTC 1 cut(s) 1400
PfeI GAWTC 5 cut(s) 76, 187, 689, 783, 1597
PkrI GCNGC 2 cut(s) 823, 1012
PluTI GGCGCC 1 cut(s) 9
Ppu21I YACGTR 2 cut(s) 909, 1956
PscI ACATGT 1 cut(s) 1398
PshBI ATTAAT 2 cut(s) 1383, 1445
PsiI TTATAA 1 cut(s) 282
PspN4I GGNNCC 3 cut(s) 7, 1524, 2032
PspPI GGNCC 3 cut(s) 152, 1795, 2030
PsuI RGATCY 1 cut(s) 1891
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 4 cut(s) 491, 1037, 1508, 1949
RsaNI GTAC 4 cut(s) 490, 1036, 1507, 1948
RseI CAYNNNNRTG 2 cut(s) 1334, 1655
SapI GCTCTTC 1 cut(s) 563
SatI GCNGC 2 cut(s) 822, 1011
Sau3AI GATC 6 cut(s) 291, 532, 733, 1338, 1684, 1891
Sau96I GGNCC 3 cut(s) 152, 1795, 2030
SduI GDGCHC 2 cut(s) 1066, 1212
SfaNI GCATC 5 cut(s) 316, 736, 1261, 1542, 1773
SfcI CTRYAG 1 cut(s) 1354
SfoI GGCGCC 1 cut(s) 7
SmiMI CAYNNNNRTG 2 cut(s) 1334, 1655
SmlI CTYRAG 1 cut(s) 1715
SmoI CTYRAG 1 cut(s) 1715
SnaBI TACGTA 1 cut(s) 1956
SseBI AGGCCT 1 cut(s) 863
SsiI CCGC 4 cut(s) 68, 658, 1704, 1771
SspDI GGCGCC 1 cut(s) 5
SspI AATATT 1 cut(s) 1860
SspMI CTAG 2 cut(s) 372, 1512
StuI AGGCCT 1 cut(s) 863
StyI CCWWGG 1 cut(s) 750
TaaI ACNGT 4 cut(s) 394, 1021, 1256, 1639
TaiI ACGT 3 cut(s) 456, 911, 1958
TaqI TCGA 1 cut(s) 202
TatI WGTACW 2 cut(s) 489, 1947
TfiI GAWTC 5 cut(s) 76, 187, 689, 783, 1597
TscAI CASTG 1 cut(s) 1281
TseFI GTSAC 1 cut(s) 1429
TseI GCWGC 2 cut(s) 821, 1010
Tsp45I GTSAC 1 cut(s) 1429
TspRI CASTG 1 cut(s) 1281
Vha464I CTTAAG 1 cut(s) 1715
VspI ATTAAT 2 cut(s) 1383, 1445
XapI RAATTY 2 cut(s) 251, 1490
XceI RCATGY 2 cut(s) 547, 1402
XmiI GTMKAC 1 cut(s) 1357
XmnI GAANNNNTTC 1 cut(s) 1400
XspI CTAG 2 cut(s) 372, 1512
ZraI GACGTC 1 cut(s) 454
Zsp2I ATGCAT 1 cut(s) 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.