RchiOBHm_Chr7g0215291

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004858
Physical Location & Seq
Forward (+)
32858812 .. 32863025
4214 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19263

Sequence Viewer

Length: 2316 bp
ATGAAACTGTTCTGTTGTAGAGAAATTGCATTTGGGTTCTTTAAACTAGCCTTTAGGGATGATAATCAGCAGACTGTGGAGTCATGTTGTGTGGCTGCACATGTTTTGGCGGCCGAAAATCTACGGTTTCTGGCTCAAGATGTGGTTTCGTGTGTCATTGGGAGGATTGGGCCTAGTAGGAGTAGGGATTTGGTGGGGTTTATGTGGGGACGGCATTGTGAATACGAGTCGGATTTTTCGGTTCTTGATACACTACTGAGGGGGTTCTTGAATGCGGAAATGGGCGCCGAGGCTTTGGAGGTTTTGAGGAGGATGAGGGAGGTGGGAGTGAGGCCGAGTTTGTCAGCGGTTGCGATTCTGTTCAGGTTGTTGATAAGGGTTGGTGATTATGGTAGTGTGTGGAAGGTGTTTAGGGGTATGATTAGAGAAGGGCCTTATCCATGTAATTATGTTTTTAGTGCAATAATTCTTGGGTTTTGTCGAAAAGGGTTGGTTAGAGTTGGGGAGAGTTTGTTACAGGTGATGTGGAAATTCCAATGTGAACCGGATGTTTTTGCTTATAATATTGTGATCTATGCAAATTGTGCGAGAGGGCAGACAGCTGATGCACTTGAATGGGTGGAGTTGATGATTGCGAGGGGATGTAAACCGAGCATTGTTACATTTAATACAGTCATAAGTGCATTGTGTAAGGAAGGAAATGTGGTGGAGGCAAGGAAGCTTTTTGATGATGTCCCAGACATGGGTGTTTATCCGAATACCGTAATGTACAATACCATGATGGATGGGTATGTTAAGGCAAGGGAGATTGGTCAGGCTAACATGCTTTTTGAAGAAATGAGAAACAAGAGCATTTCTCCAGATGGCATAACTTTCAATATCTTGATTGGAGGGCATTACAAGTATGGAAGCGAAGATGATGGAGACAGGTTGTTGCGGGATTTATCTGTGTCAGGATTACTTCCAGATTCTTCATTGTATGATATCTATGTTTCTGTGTTGTGTTGGGCAGATCGGTTGGACGATGCCATGGCAGTTTTAGAGGATATGCTTGAAAGAGGATTGCCTCTAAGTGTGGTCGCTTTCAACTCTGTCATTGCAGCTTGTAGCAGAGTAGGGTTGGAAGAAAAAGCATATAAGGCCTTTAACTTCATGATTTCATTTGGTATAACTCCTTCATCTTCTACATGTAGTTCTTTGCTTATGGGTTTATCTAAGAAGGGTTACTTGCAAGAAGCCAGAGAGCTTTTGTGTAAAATGATGGAGAAGGGGTTTCCTATCAGAAAAGCTGCTTTTACGGTGCTTTTGGATGGGTACTTTAGGATGGGTGATTTAGACGGGGCACAAAGTTTGTGGAATGAGATGGAAGGAAGAGGCATATCTCCTGATGTTGTTGCCTTTTCAGCATTTATCAATGGACTATCTAAAGCCAGTTTAATGGAAGAAGCATATGATATGTTTCAAGAAATGTCAAGAAGAGGTTTTGTGCCCAATAATTTTGTCTATAATTCTTTGATTGGTGGGTTTTGCTACTGTGGTAAGTTGAGTGATGCACTGAGGTTGGAGAGAGAGATGAGGCAAAGGGGTCTTGTTCCAGATATTTTTACCACCAATATGATCATTCATGGGTTCTGCAGACAGGGGAGGATGAAGTCAGCAATTAATACATTTATGAACATGTTCCAAACTGGGTTAACCCCAGATATCGTCACTTACAATACATTAATTGGTGGTTATTGTAAAGCATTTGACATGGTTAGGGCAGATGAATTTTTGTATAAAATGTACGCTAGCGGATGGGAACCAGATATCACAACCTATAATATATGGATGCATGGTTTTTGTAGTAGCCGAAAGATAAATCGAGCTGTGATGATTCTGGATGAGCTTGTATTGAGAGGTGTTGTTCCGGACACAGTAACATACAACACTATGATGAATGGTGTTTGTGTTGACATACTGGATCGTGCTATGATTTTAACCGCTAAATTGCTGAAGTTGGCGTTTCTTCCAAATGTTGTTACAGCTAATGTATTGTTGTCTCAGTTCCGCAGGCAGGGGATGCCTGAGAAGGCCCTAATGTGGGGTCAGAAGTTGAGTCAGTTTTCCTTATGTTTTGATGAAATTACCTACAAAATATTAGACAGAGCCTATCATAATATGCAAGAAGATCCTGCAATTCCAAGTGCAACACCTGAGAAAAGCCTCTTCTTGGATTTCCTCATGTACATTACATATGATTATTTATGTAAAAATAAACCTTGCAGAGATGTAAGACAAAACCCTCTTAAAGTAATTGGTCTCAGTGGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 map00500
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

771

Amino Acids

86.98

Weight (kDa)

6.22

Isoelectric Point (pI)

33.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 147 - 195 3e-06 PPR repeat family
PPR_3 PF13812 172 - 229 1.6e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 182 - 224 7e-09 PPR repeat family
PPR_1 PF12854 213 - 244 6.8e-12 PPR repeat
PPR_2 PF13041 217 - 255 1.9e-09 PPR repeat family
PPR PF01535 220 - 250 7.4e-07 PPR repeat
PPR_3 PF13812 240 - 297 1.5e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 248 - 281 6.9e-06 PPR repeat
PPR_2 PF13041 252 - 300 6.6e-16 PPR repeat family
PPR PF01535 255 - 284 3.2e-06 PPR repeat
PPR_long PF17177 341 - 464 3.8e-09 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 343 - 454 5.2e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 358 - 406 8.3e-08 PPR repeat family
PPR PF01535 431 - 460 9.7e-06 PPR repeat
PPR_2 PF13041 431 - 476 1.7e-11 PPR repeat family
PPR_1 PF12854 458 - 491 3e-07 PPR repeat
PPR_2 PF13041 462 - 510 3.7e-14 PPR repeat family
PPR PF01535 465 - 495 4.3e-06 PPR repeat
PPR_3 PF13812 486 - 541 2.3e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 493 - 526 3.7e-09 PPR repeat
PPR_2 PF13041 497 - 546 4.4e-14 PPR repeat family
PPR PF01535 501 - 530 6.5e-06 PPR repeat
PPR_3 PF13812 521 - 579 8.7e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 528 - 557 1.5e-07 PPR repeat
PPR_2 PF13041 532 - 581 2.7e-16 PPR repeat family
PPR_1 PF12854 564 - 595 7.4e-08 PPR repeat
PPR_2 PF13041 567 - 615 3.5e-14 PPR repeat family
PPR_2 PF13041 602 - 650 5.2e-14 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 561
AasI GACNNNNNNGTC 1 cut(s) 79
AccB1I GGYRCC 1 cut(s) 284
AccIII TCCGGA 1 cut(s) 1909
AciI CCGC 7 cut(s) 110, 275, 347, 937, 1794, 1983, 2050
AclWI GGATC 2 cut(s) 1971, 2165
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 2 cut(s) 530, 1769
AcuI CTGAAG 1 cut(s) 2015
AcyI GRCGYC 1 cut(s) 285
AfaI GTAC 4 cut(s) 770, 1316, 1787, 2228
AfiI CCNNNNNNNGG 6 cut(s) 742, 743, 2056, 2082, 2083, 2212
AflIII ACRYGT 3 cut(s) 100, 1187, 1677
AgsI TTSAA 7 cut(s) 271, 614, 833, 877, 1055, 1087, 1463
AjuI GAANNNNNNNTTGG 2 cut(s) 15, 47
AluBI AGCT 8 cut(s) 602, 721, 1103, 1246, 1289, 1868, 1888, 2027
AluI AGCT 8 cut(s) 602, 721, 1103, 1246, 1289, 1868, 1888, 2027
Alw26I GTCTC 3 cut(s) 918, 2046, 2306
AlwI GGATC 2 cut(s) 1971, 2165
Aor13HI TCCGGA 1 cut(s) 1909
AoxI GGCC 7 cut(s) 111, 170, 332, 431, 1140, 2073, 2308
ApeKI GCWGC 3 cut(s) 95, 1100, 1289
ApoI RAATTY 2 cut(s) 530, 1769
AseI ATTAAT 2 cut(s) 1662, 1724
Asp700I GAANNNNTTC 2 cut(s) 8, 1679
AspLEI GCGC 1 cut(s) 287
AspS9I GGNCC 4 cut(s) 170, 431, 2074, 2309
AsuHPI GGTGA 3 cut(s) 395, 532, 1340
AsuNHI GCTAGC 1 cut(s) 1790
BaeGI GKGCMC 2 cut(s) 1345, 1491
BanI GGYRCC 1 cut(s) 284
BarI GAAGNNNNNNTAC 2 cut(s) 1159, 1191
BbvI GCAGC 3 cut(s) 82, 1112, 1276
BccI CCATC 9 cut(s) 775, 779, 857, 914, 1255, 1304, 1318, 1357, 1791
BceAI ACGGC 1 cut(s) 227
BclI TGATCA 1 cut(s) 1617
BcoDI GTCTC 3 cut(s) 918, 2046, 2306
BfaI CTAG 3 cut(s) 47, 174, 1791
BfmI CTRYAG 1 cut(s) 1633
BfoI RGCGCY 1 cut(s) 288
BisI GCNGC 4 cut(s) 96, 111, 1101, 1290
BlsI GCNGC 4 cut(s) 97, 112, 1102, 1291
BmgT120I GGNCC 4 cut(s) 170, 431, 2074, 2309
BmiI GGNNCC 3 cut(s) 286, 1803, 2311
BmrI ACTGGG 1 cut(s) 1698
BmsI GCATC 5 cut(s) 595, 1015, 1540, 1821, 2052
BmtI GCTAGC 1 cut(s) 1794
BmuI ACTGGG 1 cut(s) 1698
BplI GAGNNNNNCTC 2 cut(s) 841, 873
BpmI CTGGAG 1 cut(s) 843
BpuEI CTTGAG 1 cut(s) 120
BsaBI GATNNNNATC 1 cut(s) 63
BsaHI GRCGYC 1 cut(s) 285
BsaI GGTCTC 1 cut(s) 2306
BsaJI CCNNGG 2 cut(s) 288, 1029
BsaWI WCCGGW 2 cut(s) 544, 1909
BsaXI ACNNNNNCTCC 4 cut(s) 497, 527, 1256, 1286
Bsc4I CCNNNNNNNGG 6 cut(s) 742, 743, 2056, 2082, 2083, 2212
Bse1I ACTGG 3 cut(s) 1431, 1693, 1965
Bse3DI GCAATG 1 cut(s) 1095
Bse8I GATNNNNATC 1 cut(s) 63
BseAI TCCGGA 1 cut(s) 1909
BseDI CCNNGG 2 cut(s) 288, 1029
BseJI GATNNNNATC 1 cut(s) 63
BseLI CCNNNNNNNGG 6 cut(s) 742, 743, 2056, 2082, 2083, 2212
BseMI GCAATG 1 cut(s) 1095
BseMII CTCAG 5 cut(s) 248, 1547, 2057, 2058, 2187
BseNI ACTGG 3 cut(s) 1431, 1693, 1965
BseRI GAGGAG 1 cut(s) 322
BseSI GKGCMC 2 cut(s) 1345, 1491
BseX3I CGGCCG 1 cut(s) 111
BseXI GCAGC 3 cut(s) 82, 1112, 1276
BsgI GTGCAG 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 7 cut(s) 113, 172, 334, 433, 1142, 2075, 2310
BshNI GGYRCC 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 114
BsiSI CCGG 2 cut(s) 545, 1910
BslFI GGGAC 2 cut(s) 222, 719
BslI CCNNNNNNNGG 6 cut(s) 742, 743, 2056, 2082, 2083, 2212
BsmAI GTCTC 3 cut(s) 918, 2046, 2306
BsmFI GGGAC 2 cut(s) 222, 719
BsmI GAATGC 1 cut(s) 277
BsnI GGCC 7 cut(s) 113, 172, 334, 433, 1142, 2075, 2310
Bso31I GGTCTC 1 cut(s) 2306
Bsp1286I GDGCHC 2 cut(s) 1345, 1491
Bsp13I TCCGGA 1 cut(s) 1909
Bsp1407I TGTACA 2 cut(s) 768, 2226
Bsp143I GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
Bsp19I CCATGG 1 cut(s) 1029
BspACI CCGC 7 cut(s) 110, 275, 347, 937, 1794, 1983, 2050
BspANI GGCC 7 cut(s) 113, 172, 334, 433, 1142, 2075, 2310
BspCNI CTCAG 6 cut(s) 249, 1548, 2056, 2059, 2188, 2316
BspEI TCCGGA 1 cut(s) 1909
BspHI TCATGA 1 cut(s) 1152
BspLI GGNNCC 3 cut(s) 286, 1803, 2311
BspMAI CTGCAG 1 cut(s) 1637
BspOI GCTAGC 1 cut(s) 1794
BspPI GGATC 2 cut(s) 1971, 2165
BspT107I GGYRCC 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 2306
BsrDI GCAATG 1 cut(s) 1095
BsrGI TGTACA 2 cut(s) 768, 2226
BsrI ACTGG 3 cut(s) 1431, 1693, 1965
BssECI CCNNGG 2 cut(s) 288, 1029
BssMI GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
BssNI GRCGYC 1 cut(s) 285
BssT1I CCWWGG 1 cut(s) 1029
Bst4CI ACNGT 8 cut(s) 9, 76, 126, 673, 763, 1300, 1535, 1918
Bst6I CTCTTC 3 cut(s) 1366, 1471, 2213
BstACI GRCGYC 1 cut(s) 285
BstAPI GCANNNNNTGC 2 cut(s) 584, 2062
BstAUI TGTACA 2 cut(s) 768, 2226
BstC8I GCNNGC 2 cut(s) 1792, 2054
BstDEI CTNAG 8 cut(s) 257, 1070, 1215, 1556, 2043, 2067, 2196, 2303
BstDSI CCRYGG 1 cut(s) 1029
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 1 cut(s) 287
BstKTI GATC 5 cut(s) 573, 1015, 1620, 1966, 2173
BstMAI GTCTC 3 cut(s) 918, 2046, 2306
BstMBI GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 4 cut(s) 584, 1139, 1403, 2062
BstNSI RCATGY 4 cut(s) 104, 826, 1191, 1681
BstSFI CTRYAG 1 cut(s) 1633
BstSLI GKGCMC 2 cut(s) 1345, 1491
BstV1I GCAGC 3 cut(s) 82, 1112, 1276
BstX2I RGATCY 1 cut(s) 2170
BstXI CCANNNNNNTGG 1 cut(s) 1438
BstYI RGATCY 1 cut(s) 2170
BstZI CGGCCG 1 cut(s) 111
BsuRI GGCC 7 cut(s) 113, 172, 334, 433, 1142, 2075, 2310
BtgI CCRYGG 1 cut(s) 1029
BtsIMutI CAGTG 2 cut(s) 1553, 2311
Cac8I GCNNGC 2 cut(s) 1792, 2054
CciI TCATGA 1 cut(s) 1152
CfoI GCGC 1 cut(s) 287
Cfr13I GGNCC 4 cut(s) 170, 431, 2074, 2309
Csp6I GTAC 4 cut(s) 769, 1315, 1786, 2227
CspCI CAANNNNNGTGG 2 cut(s) 1334, 1369
CviQI GTAC 4 cut(s) 769, 1315, 1786, 2227
DdeI CTNAG 8 cut(s) 257, 1070, 1215, 1556, 2043, 2067, 2196, 2303
DinI GGCGCC 1 cut(s) 286
DpnI GATC 5 cut(s) 572, 1014, 1619, 1965, 2172
DpnII GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
DraI TTTAAA 1 cut(s) 43
DrdI GACNNNNNNGTC 1 cut(s) 79
DseDI GACNNNNNNGTC 1 cut(s) 79
EaeI YGGCCR 1 cut(s) 111
EagI CGGCCG 1 cut(s) 111
Eam1104I CTCTTC 3 cut(s) 1366, 1471, 2213
EarI CTCTTC 3 cut(s) 1366, 1471, 2213
EclXI CGGCCG 1 cut(s) 111
Eco130I CCWWGG 1 cut(s) 1029
Eco147I AGGCCT 1 cut(s) 1142
Eco31I GGTCTC 1 cut(s) 2306
Eco32I GATATC 3 cut(s) 985, 1705, 1810
Eco52I CGGCCG 1 cut(s) 111
Eco57I CTGAAG 1 cut(s) 2015
EcoO109I RGGNCCY 2 cut(s) 431, 2074
EcoRV GATATC 3 cut(s) 985, 1705, 1810
EcoT14I CCWWGG 1 cut(s) 1029
EcoT22I ATGCAT 1 cut(s) 1836
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 1 cut(s) 1029
FalI AAGNNNNNCTT 2 cut(s) 1211, 1243
FaqI GGGAC 2 cut(s) 222, 719
FauI CCCGC 1 cut(s) 930
FauNDI CATATG 2 cut(s) 1450, 2236
FbaI TGATCA 1 cut(s) 1617
Fnu4HI GCNGC 4 cut(s) 96, 111, 1101, 1290
Fsp4HI GCNGC 4 cut(s) 96, 111, 1101, 1290
FspBI CTAG 3 cut(s) 47, 174, 1791
GlaI GCGC 1 cut(s) 286
GluI GCNGC 4 cut(s) 96, 111, 1101, 1290
GsuI CTGGAG 1 cut(s) 843
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 7 cut(s) 113, 172, 334, 433, 1142, 2075, 2310
HapII CCGG 2 cut(s) 545, 1910
HhaI GCGC 1 cut(s) 287
Hin1I GRCGYC 1 cut(s) 285
Hin6I GCGC 1 cut(s) 285
HinP1I GCGC 1 cut(s) 285
HincII GTYRAC 2 cut(s) 1695, 1954
HindII GTYRAC 2 cut(s) 1695, 1954
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 6 cut(s) 80, 227, 355, 968, 1876, 2098
HpaI GTTAAC 1 cut(s) 1695
HpaII CCGG 2 cut(s) 545, 1910
HphI GGTGA 3 cut(s) 395, 532, 1340
Hpy166II GTNNAC 4 cut(s) 542, 647, 1695, 1954
Hpy188I TCNGA 4 cut(s) 232, 756, 1283, 2091
Hpy8I GTNNAC 4 cut(s) 542, 647, 1695, 1954
HpyAV CCTTC 8 cut(s) 397, 422, 689, 1185, 1213, 1261, 1361, 2065
HpyCH4III ACNGT 8 cut(s) 9, 76, 126, 673, 763, 1300, 1535, 1918
HpyF10VI GCNNNNNNNGC 4 cut(s) 584, 1139, 1403, 2062
HpyF3I CTNAG 8 cut(s) 257, 1070, 1215, 1556, 2043, 2067, 2196, 2303
Hsp92I GRCGYC 1 cut(s) 285
HspAI GCGC 1 cut(s) 285
KasI GGCGCC 1 cut(s) 284
Kpn2I TCCGGA 1 cut(s) 1909
Ksp22I TGATCA 1 cut(s) 1617
KspAI GTTAAC 1 cut(s) 1695
Kzo9I GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
Lsp1109I GCAGC 3 cut(s) 82, 1112, 1276
LweI GCATC 5 cut(s) 595, 1015, 1540, 1821, 2052
MaeI CTAG 3 cut(s) 47, 174, 1791
MaeIII GTNAC 6 cut(s) 513, 658, 1223, 1708, 1918, 2020
MalI GATC 5 cut(s) 572, 1014, 1619, 1965, 2172
MboI GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
MflI RGATCY 1 cut(s) 2170
MhlI GDGCHC 2 cut(s) 1345, 1491
Mly113I GGCGCC 1 cut(s) 285
MlyI GAGTC 3 cut(s) 89, 236, 2107
MmeI TCCRAC 4 cut(s) 210, 999, 1101, 1542
Mph1103I ATGCAT 1 cut(s) 1836
MroI TCCGGA 1 cut(s) 1909
MroXI GAANNNNTTC 2 cut(s) 8, 1679
MslI CAYNNNNRTG 3 cut(s) 613, 1613, 1934
MspA1I CMGCKG 2 cut(s) 347, 602
MspI CCGG 2 cut(s) 545, 1910
Mva1269I GAATGC 1 cut(s) 277
MwoI GCNNNNNNNGC 4 cut(s) 584, 1139, 1403, 2062
NarI GGCGCC 1 cut(s) 285
NcoI CCATGG 1 cut(s) 1029
NdeI CATATG 2 cut(s) 1450, 2236
NdeII GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
NheI GCTAGC 1 cut(s) 1790
NlaIV GGNNCC 3 cut(s) 286, 1803, 2311
NmeAIII GCCGAG 2 cut(s) 313, 360
NmuCI GTSAC 1 cut(s) 1708
NsiI ATGCAT 1 cut(s) 1836
NspI RCATGY 4 cut(s) 104, 826, 1191, 1681
PagI TCATGA 1 cut(s) 1152
PceI AGGCCT 1 cut(s) 1142
PciI ACATGT 3 cut(s) 100, 1187, 1677
PctI GAATGC 1 cut(s) 277
PdmI GAANNNNTTC 2 cut(s) 8, 1679
PfeI GAWTC 3 cut(s) 355, 968, 1876
PkrI GCNGC 4 cut(s) 97, 112, 1102, 1291
PleI GAGTC 3 cut(s) 88, 235, 2106
PluTI GGCGCC 1 cut(s) 288
PpsI GAGTC 3 cut(s) 88, 235, 2106
PscI ACATGT 3 cut(s) 100, 1187, 1677
PshBI ATTAAT 2 cut(s) 1662, 1724
PsiI TTATAA 1 cut(s) 561
PspN4I GGNNCC 3 cut(s) 286, 1803, 2311
PspPI GGNCC 4 cut(s) 170, 431, 2074, 2309
PstI CTGCAG 1 cut(s) 1637
PsuI RGATCY 1 cut(s) 2170
PvuII CAGCTG 1 cut(s) 602
RsaI GTAC 4 cut(s) 770, 1316, 1787, 2228
RsaNI GTAC 4 cut(s) 769, 1315, 1786, 2227
RseI CAYNNNNRTG 3 cut(s) 613, 1613, 1934
SatI GCNGC 4 cut(s) 96, 111, 1101, 1290
Sau3AI GATC 5 cut(s) 570, 1012, 1617, 1963, 2170
Sau96I GGNCC 4 cut(s) 170, 431, 2074, 2309
SchI GAGTC 3 cut(s) 89, 236, 2107
SduI GDGCHC 2 cut(s) 1345, 1491
SfaNI GCATC 5 cut(s) 595, 1015, 1540, 1821, 2052
SfcI CTRYAG 1 cut(s) 1633
SfoI GGCGCC 1 cut(s) 286
SmiMI CAYNNNNRTG 3 cut(s) 613, 1613, 1934
SmlI CTYRAG 1 cut(s) 135
SmoI CTYRAG 1 cut(s) 135
SseBI AGGCCT 1 cut(s) 1142
SsiI CCGC 7 cut(s) 110, 275, 347, 937, 1794, 1983, 2050
SspDI GGCGCC 1 cut(s) 284
SspI AATATT 2 cut(s) 565, 2139
SspMI CTAG 3 cut(s) 47, 174, 1791
StuI AGGCCT 1 cut(s) 1142
StyI CCWWGG 1 cut(s) 1029
TaaI ACNGT 8 cut(s) 9, 76, 126, 673, 763, 1300, 1535, 1918
TaqI TCGA 2 cut(s) 481, 1864
TatI WGTACW 2 cut(s) 768, 2226
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 3 cut(s) 355, 968, 1876
TscAI CASTG 2 cut(s) 1560, 2311
TseFI GTSAC 1 cut(s) 1708
TseI GCWGC 3 cut(s) 95, 1100, 1289
Tsp45I GTSAC 1 cut(s) 1708
TspRI CASTG 2 cut(s) 1560, 2311
VspI ATTAAT 2 cut(s) 1662, 1724
XapI RAATTY 2 cut(s) 530, 1769
XceI RCATGY 4 cut(s) 104, 826, 1191, 1681
XmnI GAANNNNTTC 2 cut(s) 8, 1679
XspI CTAG 3 cut(s) 47, 174, 1791
Zsp2I ATGCAT 1 cut(s) 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.