Rh4BG121000

FGGY carbohydrate kinase domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0004858
Physical Location & Seq
Forward (+)
20235009 .. 20235914
906 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG121000.1

Sequence Viewer

Length: 405 bp
ATGTCTGGTAAATGGACTCGTTCCGATTCAACGCAACTCCTTCGCCCACAGCACCATCCATCACAACGCTCCTCCCCCTCAAACGCTTATTCCTCATACTTCTCTATCTCTCTCGAAATGACCTCCGCCGTCTCCGCCACCCCCACCCCCACCGCCCGCTCCGTCTTCCTCGGCGTCGACGTCGGCACCGGCAGCGCCCGCGCAGGTGTGTTTGATGAAAATGGGAAGCTTCTAGGTTCGTCTAGCAGTCCGATTCAGATTTGGAAGGACGCATGCTCCCTTGCAGAAGTTTCCGGGGATGAAGTGAAGGGTCTGGGATTTGCGGCTACTTGTTCACTAGTTGCAGTGGATGCTGATGGCTCTCCTGTTACGGTTTCCTGGAGTGTGATTCAAGAAGAAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

134

Amino Acids

13.99

Weight (kDa)

4.97

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 194
AatII GACGTC 1 cut(s) 183
Acc36I ACCTGC 1 cut(s) 194
AccB1I GGYRCC 1 cut(s) 185
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 1 cut(s) 177
AccII CGCG 1 cut(s) 201
AciI CCGC 6 cut(s) 126, 135, 153, 157, 199, 323
AcyI GRCGYC 2 cut(s) 174, 180
AgsI TTSAA 2 cut(s) 30, 392
AhlI ACTAGT 1 cut(s) 337
AjnI CCWGG 1 cut(s) 377
AluBI AGCT 1 cut(s) 229
AluI AGCT 1 cut(s) 229
Alw26I GTCTC 1 cut(s) 136
ApeKI GCWGC 1 cut(s) 192
AspLEI GCGC 2 cut(s) 197, 203
AsuC2I CCSGG 1 cut(s) 295
BanI GGYRCC 1 cut(s) 185
BbsI GAAGAC 1 cut(s) 157
BbvI GCAGC 1 cut(s) 204
BccI CCATC 3 cut(s) 63, 67, 350
BceAI ACGGC 1 cut(s) 113
BcgI CGANNNNNNTGC 2 cut(s) 23, 57
BciT130I CCWGG 1 cut(s) 379
BcnI CCSGG 1 cut(s) 295
BcoDI GTCTC 1 cut(s) 136
BcuI ACTAGT 1 cut(s) 337
BfaI CTAG 3 cut(s) 233, 243, 338
BfoI RGCGCY 1 cut(s) 198
BfuAI ACCTGC 1 cut(s) 194
BisI GCNGC 2 cut(s) 193, 324
BlsI GCNGC 2 cut(s) 194, 325
Bme1390I CCNGG 2 cut(s) 295, 379
BmiI GGNNCC 1 cut(s) 187
BmrFI CCNGG 2 cut(s) 295, 379
BmsI GCATC 1 cut(s) 340
BpiI GAAGAC 1 cut(s) 157
BpmI CTGGAG 1 cut(s) 400
BpuMI CCSGG 1 cut(s) 295
BsaHI GRCGYC 2 cut(s) 174, 180
BsaJI CCNNGG 2 cut(s) 169, 294
BsaXI ACNNNNNCTCC 2 cut(s) 260, 290
Bse118I RCCGGY 1 cut(s) 188
BseBI CCWGG 1 cut(s) 379
BseDI CCNNGG 2 cut(s) 169, 294
BseGI GGATG 3 cut(s) 55, 304, 355
BseRI GAGGAG 1 cut(s) 61
BseXI GCAGC 1 cut(s) 204
Bsh1236I CGCG 1 cut(s) 201
BshNI GGYRCC 1 cut(s) 185
BsiSI CCGG 2 cut(s) 189, 294
BsmAI GTCTC 1 cut(s) 136
BsmBI CGTCTC 1 cut(s) 136
BspACI CCGC 6 cut(s) 126, 135, 153, 157, 199, 323
BspFNI CGCG 1 cut(s) 201
BspLI GGNNCC 1 cut(s) 187
BspMI ACCTGC 1 cut(s) 194
BspT107I GGYRCC 1 cut(s) 185
BsrBI CCGCTC 1 cut(s) 159
BsrFI RCCGGY 1 cut(s) 188
BssAI RCCGGY 1 cut(s) 188
BssECI CCNNGG 2 cut(s) 169, 294
BssNI GRCGYC 2 cut(s) 174, 180
Bst2UI CCWGG 1 cut(s) 379
Bst4CI ACNGT 1 cut(s) 373
BstACI GRCGYC 2 cut(s) 174, 180
BstAPI GCANNNNNTGC 1 cut(s) 350
BstC8I GCNNGC 3 cut(s) 157, 199, 274
BstF5I GGATG 3 cut(s) 55, 304, 355
BstFNI CGCG 1 cut(s) 201
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 2 cut(s) 197, 203
BstMAI GTCTC 1 cut(s) 136
BstMWI GCNNNNNNNGC 4 cut(s) 134, 192, 198, 350
BstNI CCWGG 1 cut(s) 379
BstNSI RCATGY 1 cut(s) 276
BstSCI CCNGG 2 cut(s) 293, 377
BstUI CGCG 1 cut(s) 201
BstV1I GCAGC 1 cut(s) 204
BstV2I GAAGAC 1 cut(s) 157
BtsCI GGATG 3 cut(s) 55, 304, 355
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 1 cut(s) 351
BveI ACCTGC 1 cut(s) 194
Cac8I GCNNGC 3 cut(s) 157, 199, 274
CfoI GCGC 2 cut(s) 197, 203
Cfr10I RCCGGY 1 cut(s) 188
CseI GACGC 2 cut(s) 163, 278
CviAII CATG 1 cut(s) 273
CviJI RGCY 3 cut(s) 229, 326, 360
CviKI_1 RGCY 3 cut(s) 229, 326, 360
EciI GGCGGA 2 cut(s) 115, 124
EcoRII CCWGG 1 cut(s) 377
Esp3I CGTCTC 1 cut(s) 136
FaeI CATG 1 cut(s) 276
FaiI YATR 3 cut(s) 97, 274, 403
FatI CATG 1 cut(s) 272
FauI CCCGC 2 cut(s) 164, 206
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 2 cut(s) 193, 324
FokI GGATG 3 cut(s) 42, 311, 362
Fsp4HI GCNGC 2 cut(s) 193, 324
FspBI CTAG 3 cut(s) 233, 243, 338
GlaI GCGC 2 cut(s) 196, 202
GluI GCNGC 2 cut(s) 193, 324
GsuI CTGGAG 1 cut(s) 400
HaeII RGCGCY 1 cut(s) 198
HapII CCGG 2 cut(s) 189, 294
HgaI GACGC 2 cut(s) 163, 278
HhaI GCGC 2 cut(s) 197, 203
Hin1I GRCGYC 2 cut(s) 174, 180
Hin1II CATG 1 cut(s) 276
Hin6I GCGC 2 cut(s) 195, 201
HinP1I GCGC 2 cut(s) 195, 201
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HindIII AAGCTT 1 cut(s) 227
HinfI GANTC 4 cut(s) 16, 26, 253, 388
HpaII CCGG 2 cut(s) 189, 294
Hpy166II GTNNAC 2 cut(s) 178, 335
Hpy188I TCNGA 3 cut(s) 25, 252, 258
Hpy188III TCNNGA 2 cut(s) 113, 392
Hpy8I GTNNAC 2 cut(s) 178, 335
Hpy99I CGWCG 3 cut(s) 179, 182, 185
HpyAV CCTTC 3 cut(s) 50, 259, 301
HpyCH4III ACNGT 1 cut(s) 373
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 2 cut(s) 284, 344
HpyF10VI GCNNNNNNNGC 4 cut(s) 134, 192, 198, 350
HpySE526I ACGT 1 cut(s) 180
Hsp92I GRCGYC 2 cut(s) 174, 180
Hsp92II CATG 1 cut(s) 276
HspAI GCGC 2 cut(s) 195, 201
LmnI GCTCC 3 cut(s) 74, 164, 281
LpnPI CCDG 7 cut(s) 189, 202, 299, 307, 364, 378, 391
Lsp1109I GCAGC 1 cut(s) 204
LweI GCATC 1 cut(s) 340
MaeI CTAG 3 cut(s) 233, 243, 338
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 367
MbiI CCGCTC 1 cut(s) 159
MboII GAAGA 1 cut(s) 157
MlyI GAGTC 1 cut(s) 10
MnlI CCTC 5 cut(s) 82, 88, 103, 133, 179
MspI CCGG 2 cut(s) 189, 294
MspR9I CCNGG 2 cut(s) 295, 379
MvaI CCWGG 1 cut(s) 379
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 4 cut(s) 134, 192, 198, 350
NciI CCSGG 1 cut(s) 295
NlaIII CATG 1 cut(s) 276
NlaIV GGNNCC 1 cut(s) 187
NmeAIII GCCGAG 1 cut(s) 150
NspI RCATGY 1 cut(s) 276
PaeI GCATGC 1 cut(s) 276
PaqCI CACCTGC 1 cut(s) 194
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PfeI GAWTC 3 cut(s) 26, 253, 388
PfoI TCCNGGA 1 cut(s) 377
PkrI GCNGC 2 cut(s) 194, 325
PleI GAGTC 1 cut(s) 10
PpsI GAGTC 1 cut(s) 10
Psp6I CCWGG 1 cut(s) 377
PspGI CCWGG 1 cut(s) 377
PspN4I GGNNCC 1 cut(s) 187
SalI GTCGAC 1 cut(s) 176
SatI GCNGC 2 cut(s) 193, 324
SchI GAGTC 1 cut(s) 10
ScrFI CCNGG 2 cut(s) 295, 379
SetI ASST 5 cut(s) 125, 183, 208, 231, 238
SfaNI GCATC 1 cut(s) 340
SgrDI CGTCGACG 1 cut(s) 176
SpeI ACTAGT 1 cut(s) 337
SphI GCATGC 1 cut(s) 276
SsiI CCGC 6 cut(s) 126, 135, 153, 157, 199, 323
SspMI CTAG 3 cut(s) 233, 243, 338
StyD4I CCNGG 2 cut(s) 293, 377
TaaI ACNGT 1 cut(s) 373
TaiI ACGT 1 cut(s) 183
TaqI TCGA 2 cut(s) 114, 177
TauI GCSGC 1 cut(s) 326
TfiI GAWTC 3 cut(s) 26, 253, 388
TscAI CASTG 1 cut(s) 351
TseI GCWGC 1 cut(s) 192
TspDTI ATGAA 2 cut(s) 231, 315
TspGWI ACGGA 1 cut(s) 151
TspRI CASTG 1 cut(s) 351
XceI RCATGY 1 cut(s) 276
XmiI GTMKAC 1 cut(s) 177
XspI CTAG 3 cut(s) 233, 243, 338
ZraI GACGTC 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.