Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

34912918 .. 34917870

Gene Structure 4953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1263500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCCATTTGTCCAAACTTCTCCGACCAAAGTTCGCCTCTCGAGCCGAATATTACCCCTAATTTACCTTCTTCTACTTCTTTTTTCAGTACCTAATGTGTACCCAGTTGACTTGTTCGAACATATATGGGTTGTGGATCGTCTGCAGCGCTTGGGAATCTCGAGATATTTCGAGCCACAACTTAAGGAATGTGTTAATTACGTAAGCAGATATTGGACTGAGAAAGGAATTGGTTGGGCAAGAAACTCGGAGGTTCAGGATATTGATGACACAGCCATGGCATTCAGACTACTCAGGTTGCATGGCCACCAAGTGTCTCCTGATGTGTTTAAGCATTTCAAGAAGGGCAATAAGTTCATATGCTTTGCGGGGCAAAGCACACAAGCTGTGACTGGAATGTACAACTTGTTTAGGGCTAGTCAGGTACTGTTCCCAGGAGAGACGATCCTTGAGGAAGCTAAGGACTTTTCAACAAAATTTCTGAGGGAAAAACAAGCTTCTAATGAGCTGTTGGACAAATGGGTCATCGCGAAGGACTTGCCCGGGGAGGTTGCGATCAAACCGTCATACTCAAAACAGGTTGGGTACGCACTAGATTTTCCATGGTATGCGAGCTTACCCCGACTAGAGACCAGATTCTACATCCAACAGTACGGTGGCCGTGATGACGTCTGGATTGGCAAGACTCTCTACAGGATGCCTTACGTGAGCAATAACTTGTATCTCGAGCTGGCGAAACTGGATTACAACAATTGCCAATCACTGCATCTGATCGAATGGGACAACATTCAAAAGTGGTACGCAGAATGTAAACTTGAAAACTATGGATTGAGCAGAAGAAGCCTCCTCATGGCTTATTTTGTTGCGGCAGCGAGTATTTTCGAGCCGGAAAGAGCCAACGAGCGGCTTGCATGGGCTAAAACGGCTTCATTAATTGAGACAATTGGGTCTCATTTCAAGGAAGGAACTTCTCAAAGGAAGGCATTTGTACATGAATTCAAAACTAGGAAGGTGAATACCAACAAGAAAGAGCAGGGACTCGTTGAGACCTTGCTGGCAACCCTACACCGCCTCTCGTTTGACGCCATGGTGGCGCATGGCCAAGACATCAGCCACTCTCTACGCCAAGCTTGGGAAAAGTGGCTTCTAAAGTGGCAAGAGCAAGGAGATATGCACCAAGACGAAGCTGAGCTGCTGGTGGAAACAATAAATCAAACCGCCGGCCTTTTGCTTTCAAACGGGCTGTTGTTGTCCATTCCACAGCATGAGCAACTTTTCAAGATCACCAACACAGTTTGCAACAAACTTCGCTGCTACCAAAACCAAAACCACAAGGTGAATGAAAACGGTGGCTACATCAAGGCAACTCAGGAAATCGAATTGGAGATGCAGCAGCTTGTTCAAATGGTGCTGCAAAAGCCTTTGGATGGTGCCATTGAATCTTCGATCAAGCAAACCTTTTTCGCGGTTGCAAGGAGCTTTTATTACTCTGCGTACTCGGACGCTGGAACAATCATTAGCCACCTTGCTAAAGTACTCTTCGAGAGAGTAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

519

Amino Acids

59.93

Weight (kDa)

8.3

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	28 - 169	8.3e-43	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	269 - 385	9.2e-07	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	521, 946
AatII	GACGTC	1 cut(s)	672
AccB1I	GGYRCC	1 cut(s)	1430
AccBSI	CCGCTC	1 cut(s)	904
AccI	GTMKAC	1 cut(s)	1551
AccII	CGCG	2 cut(s)	530, 1466
AciI	CCGC	6 cut(s)	368, 866, 904, 1069, 1218, 1466
AclWI	GGATC	2 cut(s)	144, 439
AcoI	YGGCCR	3 cut(s)	304, 658, 1099
AcsI	RAATTY	2 cut(s)	476, 995
AcyI	GRCGYC	2 cut(s)	669, 1083
AdeI	CACNNNGTG	2 cut(s)	313, 1336
AfeI	AGCGCT	1 cut(s)	149
AfiI	CCNNNNNNNGG	4 cut(s)	850, 903, 1132, 1427
AflII	CTTAAG	1 cut(s)	182
AjnI	CCWGG	1 cut(s)	433
Alw26I	GTCTC	6 cut(s)	321, 434, 623, 932, 954, 1040
AlwI	GGATC	2 cut(s)	144, 439
AlwNI	CAGNNNCTG	1 cut(s)	427
Ama87I	CYCGRG	4 cut(s)	40, 160, 542, 725
Aor51HI	AGCGCT	1 cut(s)	149
AoxI	GGCC	4 cut(s)	304, 658, 1099, 1222
ApeKI	GCWGC	7 cut(s)	145, 869, 1192, 1311, 1390, 1393, 1411
ApoI	RAATTY	2 cut(s)	476, 995
AseI	ATTAAT	1 cut(s)	932
AspLEI	GCGC	2 cut(s)	150, 1096
AsuC2I	CCSGG	2 cut(s)	543, 544
AsuHPI	GGTGA	3 cut(s)	1024, 1276, 1348
AsuII	TTCGAA	1 cut(s)	117
AvaI	CYCGRG	4 cut(s)	40, 160, 542, 725
BalI	TGGCCA	2 cut(s)	306, 1101
BanI	GGYRCC	1 cut(s)	1430
BbvI	GCAGC	7 cut(s)	157, 881, 1179, 1298, 1398, 1402, 1405
BccI	CCATC	1 cut(s)	1421
BceAI	ACGGC	2 cut(s)	645, 939
BcgI	CGANNNNNNTGC	6 cut(s)	228, 262, 520, 554, 890, 924
BciT130I	CCWGG	1 cut(s)	435
BcnI	CCSGG	2 cut(s)	543, 544
BcoDI	GTCTC	6 cut(s)	321, 434, 623, 932, 954, 1040
BfaI	CTAG	4 cut(s)	417, 593, 626, 1005
BfmI	CTRYAG	2 cut(s)	143, 691
BfoI	RGCGCY	1 cut(s)	151
BfrI	CTTAAG	1 cut(s)	182
BglI	GCCNNNNNGGC	1 cut(s)	1091
BisI	GCNGC	9 cut(s)	146, 867, 870, 905, 1193, 1312, 1391, 1394, 1412
BlpI	GCTNAGC	1 cut(s)	1188
BlsI	GCNGC	9 cut(s)	147, 868, 871, 906, 1194, 1313, 1392, 1395, 1413
BmcAI	AGTACT	1 cut(s)	1536
Bme1390I	CCNGG	3 cut(s)	435, 543, 544
BmeT110I	CYCGRG	4 cut(s)	40, 160, 542, 725
BmiI	GGNNCC	1 cut(s)	1432
BmrFI	CCNGG	3 cut(s)	435, 543, 544
BmrI	ACTGGG	1 cut(s)	98
BmsI	GCATC	3 cut(s)	687, 775, 1377
BmuI	ACTGGG	1 cut(s)	98
Bpu10I	CCTNAGC	1 cut(s)	459
Bpu1102I	GCTNAGC	1 cut(s)	1188
Bpu14I	TTCGAA	1 cut(s)	117
BpuEI	CTTGAG	1 cut(s)	470
BpuMI	CCSGG	2 cut(s)	543, 544
BsaAI	YACGTR	2 cut(s)	202, 706
BsaHI	GRCGYC	2 cut(s)	669, 1083
BsaI	GGTCTC	3 cut(s)	623, 954, 1040
BsaJI	CCNNGG	6 cut(s)	276, 433, 542, 543, 602, 1086
Bsc4I	CCNNNNNNNGG	4 cut(s)	850, 903, 1132, 1427
Bse118I	RCCGGY	1 cut(s)	1220
Bse1I	ACTGG	3 cut(s)	104, 397, 744
BseBI	CCWGG	1 cut(s)	435
BseDI	CCNNGG	6 cut(s)	276, 433, 542, 543, 602, 1086
BseGI	GGATG	3 cut(s)	642, 702, 1432
BseLI	CCNNNNNNNGG	4 cut(s)	850, 903, 1132, 1427
BseMII	CTCAG	5 cut(s)	210, 307, 473, 1179, 1382
BseNI	ACTGG	3 cut(s)	104, 397, 744
BseRI	GAGGAG	1 cut(s)	836
BseXI	GCAGC	7 cut(s)	157, 881, 1179, 1298, 1398, 1402, 1405
Bsh1236I	CGCG	2 cut(s)	530, 1466
BshFI	GGCC	4 cut(s)	306, 660, 1101, 1224
BshNI	GGYRCC	1 cut(s)	1430
BsiHKCI	CYCGRG	4 cut(s)	40, 160, 542, 725
BsiSI	CCGG	3 cut(s)	543, 887, 1221
BslFI	GGGAC	2 cut(s)	794, 1050
BslI	CCNNNNNNNGG	4 cut(s)	850, 903, 1132, 1427
BsmAI	GTCTC	6 cut(s)	321, 434, 623, 932, 954, 1040
BsmBI	CGTCTC	1 cut(s)	434
BsmFI	GGGAC	2 cut(s)	794, 1050
BsmI	GAATGC	1 cut(s)	281
BsnI	GGCC	4 cut(s)	306, 660, 1101, 1224
Bso31I	GGTCTC	3 cut(s)	623, 954, 1040
BsoBI	CYCGRG	4 cut(s)	40, 160, 542, 725
Bsp119I	TTCGAA	1 cut(s)	117
Bsp1407I	TGTACA	2 cut(s)	399, 988
Bsp143I	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
Bsp1720I	GCTNAGC	1 cut(s)	1188
Bsp19I	CCATGG	3 cut(s)	276, 602, 1086
Bsp68I	TCGCGA	1 cut(s)	530
BspACI	CCGC	6 cut(s)	368, 866, 904, 1069, 1218, 1466
BspANI	GGCC	4 cut(s)	306, 660, 1101, 1224
BspCNI	CTCAG	5 cut(s)	211, 306, 474, 1180, 1381
BspFNI	CGCG	2 cut(s)	530, 1466
BspLI	GGNNCC	1 cut(s)	1432
BspMAI	CTGCAG	1 cut(s)	147
BspPI	GGATC	2 cut(s)	144, 439
BspT104I	TTCGAA	1 cut(s)	117
BspT107I	GGYRCC	1 cut(s)	1430
BspTI	CTTAAG	1 cut(s)	182
BspTNI	GGTCTC	3 cut(s)	623, 954, 1040
BsrBI	CCGCTC	1 cut(s)	904
BsrFI	RCCGGY	1 cut(s)	1220
BsrGI	TGTACA	2 cut(s)	399, 988
BsrI	ACTGG	3 cut(s)	104, 397, 744
BssAI	RCCGGY	1 cut(s)	1220
BssECI	CCNNGG	6 cut(s)	276, 433, 542, 543, 602, 1086
BssMI	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
BssNI	GRCGYC	2 cut(s)	669, 1083
BssT1I	CCWWGG	3 cut(s)	276, 602, 1086
Bst2UI	CCWGG	1 cut(s)	435
Bst4CI	ACNGT	6 cut(s)	429, 564, 651, 656, 1294, 1349
Bst6I	CTCTTC	1 cut(s)	1544
BstACI	GRCGYC	2 cut(s)	669, 1083
BstAFI	CTTAAG	1 cut(s)	182
BstAUI	TGTACA	2 cut(s)	399, 988
BstBAI	YACGTR	2 cut(s)	202, 706
BstBI	TTCGAA	1 cut(s)	117
BstC8I	GCNNGC	5 cut(s)	613, 732, 909, 1056, 1222
BstDEI	CTNAG	6 cut(s)	219, 293, 459, 482, 1188, 1368
BstDSI	CCRYGG	3 cut(s)	276, 602, 1086
BstF5I	GGATG	3 cut(s)	642, 702, 1432
BstFNI	CGCG	2 cut(s)	530, 1466
BstH2I	RGCGCY	1 cut(s)	151
BstHHI	GCGC	2 cut(s)	150, 1096
BstKTI	GATC	6 cut(s)	139, 447, 558, 774, 1284, 1449
BstMAI	GTCTC	6 cut(s)	321, 434, 623, 932, 954, 1040
BstMBI	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
BstMWI	GCNNNNNNNGC	5 cut(s)	42, 840, 923, 1091, 1417
BstNI	CCWGG	1 cut(s)	435
BstSCI	CCNGG	3 cut(s)	433, 541, 542
BstSFI	CTRYAG	2 cut(s)	143, 691
BstSNI	TACGTA	1 cut(s)	202
BstUI	CGCG	2 cut(s)	530, 1466
BstV1I	GCAGC	7 cut(s)	157, 881, 1179, 1298, 1398, 1402, 1405
BsuRI	GGCC	4 cut(s)	306, 660, 1101, 1224
BtgI	CCRYGG	3 cut(s)	276, 602, 1086
BtgZI	GCGATG	1 cut(s)	511
BtsCI	GGATG	3 cut(s)	642, 702, 1432
BtsI	GCAGTG	1 cut(s)	761
BtsIMutI	CAGTG	1 cut(s)	761
BtuMI	TCGCGA	1 cut(s)	530
Cac8I	GCNNGC	5 cut(s)	613, 732, 909, 1056, 1222
CaiI	CAGNNNCTG	1 cut(s)	427
CfoI	GCGC	2 cut(s)	150, 1096
Cfr10I	RCCGGY	1 cut(s)	1220
Cfr9I	CCCGGG	1 cut(s)	542
CseI	GACGC	2 cut(s)	1091, 1511
CviAII	CATG	9 cut(s)	277, 302, 603, 850, 912, 992, 1087, 1097, 1265
DdeI	CTNAG	6 cut(s)	219, 293, 459, 482, 1188, 1368
DpnI	GATC	6 cut(s)	138, 446, 557, 773, 1283, 1448
DpnII	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
DraIII	CACNNNGTG	2 cut(s)	313, 1336
DrdI	GACNNNNNNGTC	2 cut(s)	521, 946
DseDI	GACNNNNNNGTC	2 cut(s)	521, 946
EaeI	YGGCCR	3 cut(s)	304, 658, 1099
Eam1104I	CTCTTC	1 cut(s)	1544
EarI	CTCTTC	1 cut(s)	1544
Eco105I	TACGTA	1 cut(s)	202
Eco130I	CCWWGG	3 cut(s)	276, 602, 1086
Eco31I	GGTCTC	3 cut(s)	623, 954, 1040
Eco47III	AGCGCT	1 cut(s)	149
Eco88I	CYCGRG	4 cut(s)	40, 160, 542, 725
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	1 cut(s)	433
EcoT14I	CCWWGG	3 cut(s)	276, 602, 1086
ErhI	CCWWGG	3 cut(s)	276, 602, 1086
Esp3I	CGTCTC	1 cut(s)	434
FaeI	CATG	9 cut(s)	280, 305, 606, 853, 915, 995, 1090, 1100, 1268
FalI	AAGNNNNNCTT	2 cut(s)	1442, 1474
FaqI	GGGAC	2 cut(s)	794, 1050
FatI	CATG	9 cut(s)	276, 301, 602, 849, 911, 991, 1086, 1096, 1264
FauI	CCCGC	1 cut(s)	361
FauNDI	CATATG	1 cut(s)	359
FblI	GTMKAC	1 cut(s)	1551
Fnu4HI	GCNGC	9 cut(s)	146, 867, 870, 905, 1193, 1312, 1391, 1394, 1412
FokI	GGATG	3 cut(s)	629, 709, 1439
Fsp4HI	GCNGC	9 cut(s)	146, 867, 870, 905, 1193, 1312, 1391, 1394, 1412
FspBI	CTAG	4 cut(s)	417, 593, 626, 1005
GlaI	GCGC	2 cut(s)	149, 1095
GluI	GCNGC	9 cut(s)	146, 867, 870, 905, 1193, 1312, 1391, 1394, 1412
HaeII	RGCGCY	1 cut(s)	151
HaeIII	GGCC	4 cut(s)	306, 660, 1101, 1224
HapII	CCGG	3 cut(s)	543, 887, 1221
HgaI	GACGC	2 cut(s)	1091, 1511
HhaI	GCGC	2 cut(s)	150, 1096
Hin1I	GRCGYC	2 cut(s)	669, 1083
Hin1II	CATG	9 cut(s)	280, 305, 606, 853, 915, 995, 1090, 1100, 1268
Hin6I	GCGC	2 cut(s)	148, 1094
HinP1I	GCGC	2 cut(s)	148, 1094
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HindIII	AAGCTT	2 cut(s)	495, 1128
HinfI	GANTC	5 cut(s)	156, 636, 685, 1038, 1439
HpaII	CCGG	3 cut(s)	543, 887, 1221
HphI	GGTGA	3 cut(s)	1024, 1276, 1348
Hpy166II	GTNNAC	4 cut(s)	100, 109, 812, 1552
Hpy188I	TCNGA	6 cut(s)	24, 250, 287, 483, 771, 1501
Hpy8I	GTNNAC	4 cut(s)	100, 109, 812, 1552
HpyAV	CCTTC	6 cut(s)	77, 337, 526, 956, 973, 1003
HpyCH4III	ACNGT	6 cut(s)	429, 564, 651, 656, 1294, 1349
HpyCH4IV	ACGT	3 cut(s)	201, 669, 705
HpyCH4V	TGCA	9 cut(s)	145, 301, 766, 911, 1174, 1299, 1390, 1414, 1472
HpyF10VI	GCNNNNNNNGC	5 cut(s)	42, 840, 923, 1091, 1417
HpyF3I	CTNAG	6 cut(s)	219, 293, 459, 482, 1188, 1368
HpySE526I	ACGT	3 cut(s)	201, 669, 705
Hsp92I	GRCGYC	2 cut(s)	669, 1083
Hsp92II	CATG	9 cut(s)	280, 305, 606, 853, 915, 995, 1090, 1100, 1268
HspAI	GCGC	2 cut(s)	148, 1094
KroI	GCCGGC	1 cut(s)	1220
KroNI	GCCGGC	1 cut(s)	1222
Kzo9I	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
LmnI	GCTCC	1 cut(s)	1476
Lsp1109I	GCAGC	7 cut(s)	157, 881, 1179, 1298, 1398, 1402, 1405
LweI	GCATC	3 cut(s)	687, 775, 1377
MaeI	CTAG	4 cut(s)	417, 593, 626, 1005
MaeII	ACGT	3 cut(s)	201, 669, 705
MaeIII	GTNAC	1 cut(s)	388
MalI	GATC	6 cut(s)	138, 446, 557, 773, 1283, 1448
MbiI	CCGCTC	1 cut(s)	904
MboI	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
MboII	GAAGA	4 cut(s)	62, 849, 1434, 1531
MfeI	CAATTG	2 cut(s)	751, 942
MlsI	TGGCCA	2 cut(s)	306, 1101
MluCI	AATT	9 cut(s)	60, 196, 228, 476, 751, 933, 942, 995, 1379
MluNI	TGGCCA	2 cut(s)	306, 1101
MlyI	GAGTC	2 cut(s)	679, 1032
MmeI	TCCRAC	3 cut(s)	47, 492, 670
MnlI	CCTC	8 cut(s)	47, 244, 445, 477, 541, 854, 857, 1082
Mox20I	TGGCCA	2 cut(s)	306, 1101
MroNI	GCCGGC	1 cut(s)	1220
MscI	TGGCCA	2 cut(s)	306, 1101
MseI	TTAA	4 cut(s)	183, 195, 330, 932
MslI	CAYNNNNRTG	1 cut(s)	275
Msp20I	TGGCCA	2 cut(s)	306, 1101
MspCI	CTTAAG	1 cut(s)	182
MspI	CCGG	3 cut(s)	543, 887, 1221
MspR9I	CCNGG	3 cut(s)	435, 543, 544
MunI	CAATTG	2 cut(s)	751, 942
Mva1269I	GAATGC	1 cut(s)	281
MvaI	CCWGG	1 cut(s)	435
MvnI	CGCG	2 cut(s)	530, 1466
MwoI	GCNNNNNNNGC	5 cut(s)	42, 840, 923, 1091, 1417
NaeI	GCCGGC	1 cut(s)	1222
NciI	CCSGG	2 cut(s)	543, 544
NcoI	CCATGG	3 cut(s)	276, 602, 1086
NdeI	CATATG	1 cut(s)	359
NdeII	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
NgoMIV	GCCGGC	1 cut(s)	1220
NlaIII	CATG	9 cut(s)	280, 305, 606, 853, 915, 995, 1090, 1100, 1268
NlaIV	GGNNCC	1 cut(s)	1432
NmuCI	GTSAC	1 cut(s)	388
NruI	TCGCGA	1 cut(s)	530
NspV	TTCGAA	1 cut(s)	117
PaeR7I	CTCGAG	3 cut(s)	40, 160, 725
PctI	GAATGC	1 cut(s)	281
PdiI	GCCGGC	1 cut(s)	1222
PfeI	GAWTC	3 cut(s)	156, 636, 1439
PkrI	GCNGC	9 cut(s)	147, 868, 871, 906, 1194, 1313, 1392, 1395, 1413
PleI	GAGTC	2 cut(s)	679, 1032
PpsI	GAGTC	2 cut(s)	679, 1032
Ppu21I	YACGTR	2 cut(s)	202, 706
PshBI	ATTAAT	1 cut(s)	932
Psp6I	CCWGG	1 cut(s)	433
PspGI	CCWGG	1 cut(s)	433
PspN4I	GGNNCC	1 cut(s)	1432
PstI	CTGCAG	1 cut(s)	147
PstNI	CAGNNNCTG	1 cut(s)	427
RruI	TCGCGA	1 cut(s)	530
RseI	CAYNNNNRTG	1 cut(s)	275
SaqAI	TTAA	4 cut(s)	183, 195, 330, 932
SatI	GCNGC	9 cut(s)	146, 867, 870, 905, 1193, 1312, 1391, 1394, 1412
Sau3AI	GATC	6 cut(s)	136, 444, 555, 771, 1281, 1446
ScaI	AGTACT	1 cut(s)	1536
SchI	GAGTC	2 cut(s)	679, 1032
ScrFI	CCNGG	3 cut(s)	435, 543, 544
SfaNI	GCATC	3 cut(s)	687, 775, 1377
SfcI	CTRYAG	2 cut(s)	143, 691
Sfr274I	CTCGAG	3 cut(s)	40, 160, 725
SfuI	TTCGAA	1 cut(s)	117
SlaI	CTCGAG	3 cut(s)	40, 160, 725
SmaI	CCCGGG	1 cut(s)	544
SmiMI	CAYNNNNRTG	1 cut(s)	275
SmlI	CTYRAG	5 cut(s)	40, 160, 182, 449, 725
SmoI	CTYRAG	5 cut(s)	40, 160, 182, 449, 725
SnaBI	TACGTA	1 cut(s)	202
Sse9I	AATT	9 cut(s)	60, 196, 228, 476, 751, 933, 942, 995, 1379
SsiI	CCGC	6 cut(s)	368, 866, 904, 1069, 1218, 1466
SspI	AATATT	1 cut(s)	51
SspMI	CTAG	4 cut(s)	417, 593, 626, 1005
StyD4I	CCNGG	3 cut(s)	433, 541, 542
StyI	CCWWGG	3 cut(s)	276, 602, 1086
TaaI	ACNGT	6 cut(s)	429, 564, 651, 656, 1294, 1349
TaiI	ACGT	3 cut(s)	204, 672, 708
TasI	AATT	9 cut(s)	60, 196, 228, 476, 751, 933, 942, 995, 1379
TatI	WGTACW	3 cut(s)	399, 988, 1534
TauI	GCSGC	2 cut(s)	869, 907
TfiI	GAWTC	3 cut(s)	156, 636, 1439
Tru1I	TTAA	4 cut(s)	183, 195, 330, 932
Tru9I	TTAA	4 cut(s)	183, 195, 330, 932
TscAI	CASTG	1 cut(s)	768
TseFI	GTSAC	1 cut(s)	388
TseI	GCWGC	7 cut(s)	145, 869, 1192, 1311, 1390, 1393, 1411
Tsp45I	GTSAC	1 cut(s)	388
TspDTI	ATGAA	4 cut(s)	346, 918, 1008, 1356
TspMI	CCCGGG	1 cut(s)	542
TspRI	CASTG	1 cut(s)	768
Vha464I	CTTAAG	1 cut(s)	182
VspI	ATTAAT	1 cut(s)	932
XapI	RAATTY	2 cut(s)	476, 995
XcmI	CCANNNNNNNNNTGG	1 cut(s)	653
XhoI	CTCGAG	3 cut(s)	40, 160, 725
XmaI	CCCGGG	1 cut(s)	542
XmiI	GTMKAC	1 cut(s)	1551
XspI	CTAG	4 cut(s)	417, 593, 626, 1005
ZraI	GACGTC	1 cut(s)	670
ZrmI	AGTACT	1 cut(s)	1536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.