Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

52788345 .. 52828258

Gene Structure 39914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG326200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGCCAACTCTGTTGGTGGGCTTCAGGGAAACAATGTTTCATGCTCAGGGAACTTGTGCTCTTTGGTTGTTCGGGGTTAAAGACAAAAGGGTTCTTCCCTCAATCTGCAATGCGGTTTCCAAACCTCGCACCAAAGATTATGCAGACGTGTTGCAACCAGTGATAAAGTGGCGTAAGAATCATACGATCGTGGGGGATGACACACAAGAAGATGAAGAGGCTCCTCCTACCAAGGACGACGACTGTGCAACAACCGAGATCATCAAGGAACATGTGGACTCCATCAAGTCCATGCTGTCTTCTATGGAGGATGGGGAGATCAGCGTATCAGCGTACGACACCGCCTGGGTTGCTTTGGTTGAAAATGTAAATGAAACTGATTCACCTCAATTCCCTTCCAGCCTCGAATGGATTGCCAACAACCAACTCGAAGATGGTTCTTGGGGCTACGAGGACATCTACTCCGCCCACGATCGGATTATCAGCACCCTCGCCTGCGTCGTCGCTTTGAAGTCGTGGAATCTCCACCCCGACAAATGTGACAAAGGAATGAAGTTTTTCAAGGAAAACCTAAACAAGCTGGAAGAAGAGAATATCGAACACATGCCTATAGGGTTCGAAGTTGCGTTTCCCTCTGTTCTGGAAATAGCTCGGAGCTTAAACCTTGAAGTGCCTGATGACTCTCCTGTGTTGCATAAGATCTATGCCTGCAGAAACTTAAAACTAACCAAGATACCCAAGGACATACTGCACAAAGTGGCCACAACGCTTCTTCATAGCGTGGAAGGGATGGCAGGTGTCGACTGGGAAAAGCTTCTGAAACTCCAGTCCCAAGACGGCTCGTTTTTGTTCTCTCCGGCGTCCACTGCCTACGCTGCTCAGCAGACCAAGGACGGAAAATGCATGTCGTATCTGTCCAGAGCAGTCCGCAAGTTCAATGGAGGAGTCCCTAATGTTTACCCAGTCGACTTGTTCGAACACATGTGGGCTGTGGATCGGTTGCAGAGGTTAGGATTGTGCAGATACTTCGAGCCGGAGATTAAGGAGTGTATGAACTACGTTGCCAAGTACTGGACTGAGAAAGGAATTTGCTGGGCGAGAAACTCAGAGGTTCAAGACATCGATGACACAGCGATGGGGTTCAGACTGCTCCGGTTGCATGGGCACAAAGTGTCAGCCGATGTGTTTAAGCATTTTAAGAAAGGGGACGAGTTTTTCTGCTTTGCGGGACAATCGAACCAGGCTGTGACCGGAATGTACAACTTGTATAGGGCAAGTCAGGTGGCGTTACCGGGAGAGAAGATCCTCTATGAAGCCAAGGAGTTCTCGACAAAGTTCCTTAGGGAGAAGCAAGCTTCAAACGAGCTTCTAGACAAGTGGATCATAATGAAGGACTTGCCCGGAGAGGTGGGATATGCTCTTGATGTTCCATGGTATGCCAGCTTACCTCGACTAGAGACTAAATTCTATATCGAACAATATGGTGGTGAAGATGACGTATGGATTGGCAAGACTCTCTACAGTATGCCCTACGTTAACAATAATGTGTATCTTGAGCTGGCAAAGCTAGACTTCAACAATTGCCAAGCACTACATCTCAGTGAATGGGACAACCTACAAAAGTGGTACGGAGAATGGAAAATTGGAGGCTATGGACTAAGCAGAAAAAGTCTCCTCATGGCTTATTTTGTTGCCGCAGCAAGTATTTTTGAACCTGAAAGAGCAAATGAGCGACTCGCATGGGCTAAGACGGCCTGCTTAGTTGACACGATTGAGGCTTATTTTAAGAGAGAAACTTCTCGTGAAGATAAGAAGGCATTTGTTGATGAGTTCAAAAACCTTTCAAATATGCGAGAGTATGAAGTTGCAAGGAGGTCGAATAGGAACAGGACTGCCGGGCAAGGAATTGTTGGGGCTTTGTTGGCGACGCTAAGCCAACTCTCATTGGGCACAATGGTGCTACATGGCCAAGACATTACCCAATCTCTACGTCAATCTTGGGAGAAGTGGCTACTGAAGTGGCTAGAGATAGGGGGAAGGCATCAAGATGAAGCTGAGCTACTAGTAGAAACGATAAATCAAACCGCTGGCCTTTCACTAACTGATGGGTTGTTGTCCAATAATCCAGAACATGAGCTGCTTTTTAGCCTGACTAACAAAGTTTGCAATCAACTTCGTTTTTGCCAAAACCAAAAGCACAAGATGAACAATAATGGCAGCTGCGGAACAAAAATGAACATGACTGCCAAAGCAATAGAATCAGACATGCAGCAGCTTGTGGAATTGGTGCTAAAATCTTCGGATGGCATAGAATCCTTAATCAAGCAAAGCTTTTTCTCAGTAGCAAGGAGCTTTTATTATTCGACCTACTGTGACCCTAAAATTATTAGCCACCACATTGACAAAGTACTCTTCGAGAGAGCAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

809

Amino Acids

92.28

Weight (kDa)

5.72

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	268 - 474	2.4e-48	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	552 - 675	1.1e-07	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	785
Acc36I	ACCTGC	1 cut(s)	785
AccB7I	CCANNNNNTGG	1 cut(s)	1071
AccI	GTMKAC	2 cut(s)	801, 966
AciI	CCGC	8 cut(s)	113, 342, 465, 928, 1226, 1695, 2085, 2223
AclWI	GGATC	3 cut(s)	1002, 1297, 1388
AcoI	YGGCCR	2 cut(s)	759, 1966
AcsI	RAATTY	2 cut(s)	1086, 1463
AcuI	CTGAAG	2 cut(s)	7, 2036
AcyI	GRCGYC	1 cut(s)	860
AdeI	CACNNNGTG	2 cut(s)	757, 1171
AfaI	GTAC	5 cut(s)	335, 1070, 1259, 1628, 2409
AfiI	CCNNNNNNNGG	2 cut(s)	474, 1071
AflIII	ACRYGT	3 cut(s)	147, 271, 981
AhlI	ACTAGT	1 cut(s)	2062
AjiI	CACGTC	1 cut(s)	148
AjnI	CCWGG	2 cut(s)	344, 1239
AjuI	GAANNNNNNNTTGG	2 cut(s)	1626, 1658
AleI	CACNNNNGTG	1 cut(s)	1955
Alw21I	GWGCWC	1 cut(s)	61
Alw26I	GTCTC	2 cut(s)	1451, 1676
AlwI	GGATC	3 cut(s)	1002, 1297, 1388
AoxI	GGCC	4 cut(s)	759, 1752, 1966, 2089
ApeKI	GCWGC	7 cut(s)	875, 1697, 2137, 2217, 2220, 2269, 2272
ApoI	RAATTY	2 cut(s)	1086, 1463
Asp700I	GAANNNNTTC	2 cut(s)	557, 813
AsuC2I	CCSGG	3 cut(s)	1293, 1401, 1897
AsuHPI	GGTGA	2 cut(s)	375, 1499
AsuII	TTCGAA	2 cut(s)	618, 975
AxyI	CCTNAGG	1 cut(s)	1340
BaeGI	GKGCMC	2 cut(s)	1167, 1952
BalI	TGGCCA	2 cut(s)	761, 1968
BarI	GAAGNNNNNNTAC	2 cut(s)	2043, 2075
BauI	CACGAG	1 cut(s)	1800
BbsI	GAAGAC	1 cut(s)	291
Bbv12I	GWGCWC	1 cut(s)	61
BbvI	GCAGC	7 cut(s)	862, 1709, 2124, 2207, 2229, 2281, 2284
BccI	CCATC	7 cut(s)	290, 305, 428, 784, 1129, 2099, 2297
BceAI	ACGGC	2 cut(s)	853, 1767
BcgI	CGANNNNNNTGC	8 cut(s)	227, 261, 395, 429, 1009, 1043, 1857, 1891
BciT130I	CCWGG	2 cut(s)	346, 1241
BcnI	CCSGG	3 cut(s)	1293, 1401, 1897
BcoDI	GTCTC	2 cut(s)	1451, 1676
BcuI	ACTAGT	1 cut(s)	2062
BfaI	CTAG	5 cut(s)	1370, 1454, 1568, 2024, 2063
BfmI	CTRYAG	3 cut(s)	609, 709, 1519
BfuAI	ACCTGC	1 cut(s)	785
BglII	AGATCT	1 cut(s)	699
BisI	GCNGC	8 cut(s)	876, 1695, 1698, 2138, 2218, 2221, 2270, 2273
BlpI	GCTNAGC	3 cut(s)	879, 1931, 2055
BlsI	GCNGC	8 cut(s)	877, 1696, 1699, 2139, 2219, 2222, 2271, 2274
BmcAI	AGTACT	2 cut(s)	1070, 2409
Bme1390I	CCNGG	5 cut(s)	346, 1241, 1293, 1401, 1897
BmgBI	CACGTC	1 cut(s)	148
BmiI	GGNNCC	1 cut(s)	222
BmrFI	CCNGG	5 cut(s)	346, 1241, 1293, 1401, 1897
BmrI	ACTGGG	2 cut(s)	814, 956
BmsI	GCATC	1 cut(s)	2050
BmuI	ACTGGG	2 cut(s)	814, 956
BpiI	GAAGAC	1 cut(s)	291
BpmI	CTGGAG	1 cut(s)	809
Bpu10I	CCTNAGC	1 cut(s)	45
Bpu1102I	GCTNAGC	3 cut(s)	879, 1931, 2055
Bpu14I	TTCGAA	2 cut(s)	618, 975
BpuEI	CTTGAG	1 cut(s)	1574
BpuMI	CCSGG	3 cut(s)	1293, 1401, 1897
Bsa29I	ATCGAT	1 cut(s)	1122
BsaHI	GRCGYC	1 cut(s)	860
BsaJI	CCNNGG	6 cut(s)	231, 345, 738, 888, 1317, 1430
BsaWI	WCCGGW	2 cut(s)	1152, 1250
BsaXI	ACNNNNNCTCC	2 cut(s)	446, 476
Bsc4I	CCNNNNNNNGG	2 cut(s)	474, 1071
Bse1I	ACTGG	5 cut(s)	158, 809, 826, 962, 1076
Bse21I	CCTNAGG	1 cut(s)	1340
Bse3DI	GCAATG	1 cut(s)	115
BseBI	CCWGG	2 cut(s)	346, 1241
BseCI	ATCGAT	1 cut(s)	1122
BseDI	CCNNGG	6 cut(s)	231, 345, 738, 888, 1317, 1430
BseGI	GGATG	4 cut(s)	202, 316, 795, 2308
BseLI	CCNNNNNNNGG	2 cut(s)	474, 1071
BseMI	GCAATG	1 cut(s)	115
BseMII	CTCAG	7 cut(s)	59, 893, 1068, 1119, 1612, 2046, 2352
BseNI	ACTGG	5 cut(s)	158, 809, 826, 962, 1076
BseRI	GAGGAG	3 cut(s)	213, 957, 1664
BseSI	GKGCMC	2 cut(s)	1167, 1952
BseXI	GCAGC	7 cut(s)	862, 1709, 2124, 2207, 2229, 2281, 2284
BseYI	CCCAGC	1 cut(s)	1092
BsgI	GTGCAG	2 cut(s)	734, 1039
Bsh1285I	CGRYCG	2 cut(s)	189, 475
BshFI	GGCC	4 cut(s)	761, 1754, 1968, 2091
BshVI	ATCGAT	1 cut(s)	1122
BsiEI	CGRYCG	2 cut(s)	189, 475
BsiHKAI	GWGCWC	1 cut(s)	61
BsiSI	CCGG	7 cut(s)	857, 1034, 1153, 1251, 1292, 1401, 1896
BsiWI	CGTACG	1 cut(s)	333
BslFI	GGGAC	5 cut(s)	814, 932, 1220, 1242, 1622
BslI	CCNNNNNNNGG	2 cut(s)	474, 1071
BsmAI	GTCTC	2 cut(s)	1451, 1676
BsmFI	GGGAC	5 cut(s)	814, 932, 1220, 1242, 1622
BsnI	GGCC	4 cut(s)	761, 1754, 1968, 2091
Bsp119I	TTCGAA	2 cut(s)	618, 975
Bsp1286I	GDGCHC	3 cut(s)	61, 1167, 1952
Bsp1407I	TGTACA	1 cut(s)	1257
Bsp143I	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
Bsp1720I	GCTNAGC	3 cut(s)	879, 1931, 2055
Bsp19I	CCATGG	1 cut(s)	1430
BspACI	CCGC	8 cut(s)	113, 342, 465, 928, 1226, 1695, 2085, 2223
BspANI	GGCC	4 cut(s)	761, 1754, 1968, 2091
BspCNI	CTCAG	7 cut(s)	58, 892, 1069, 1118, 1611, 2047, 2351
BspDI	ATCGAT	1 cut(s)	1122
BspLI	GGNNCC	1 cut(s)	222
BspMAI	CTGCAG	1 cut(s)	713
BspMI	ACCTGC	1 cut(s)	785
BspPI	GGATC	3 cut(s)	1002, 1297, 1388
BspT104I	TTCGAA	2 cut(s)	618, 975
BsrDI	GCAATG	1 cut(s)	115
BsrGI	TGTACA	1 cut(s)	1257
BsrI	ACTGG	5 cut(s)	158, 809, 826, 962, 1076
BssECI	CCNNGG	6 cut(s)	231, 345, 738, 888, 1317, 1430
BssMI	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
BssNI	GRCGYC	1 cut(s)	860
BssSI	CACGAG	1 cut(s)	1800
BssT1I	CCWWGG	5 cut(s)	231, 738, 888, 1317, 1430
Bst2BI	CACGAG	1 cut(s)	1800
Bst2UI	CCWGG	2 cut(s)	346, 1241
Bst4CI	ACNGT	3 cut(s)	245, 1523, 2372
Bst6I	CTCTTC	3 cut(s)	210, 582, 2417
BstACI	GRCGYC	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	1257
BstBI	TTCGAA	2 cut(s)	618, 975
BstC8I	GCNNGC	7 cut(s)	496, 709, 1353, 1441, 1560, 1756, 2089
BstDSI	CCRYGG	1 cut(s)	1430
BstF5I	GGATG	4 cut(s)	202, 316, 795, 2308
BstKTI	GATC	8 cut(s)	189, 261, 321, 475, 702, 997, 1305, 1383
BstMAI	GTCTC	2 cut(s)	1451, 1676
BstMBI	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
BstMCI	CGRYCG	2 cut(s)	189, 475
BstMWI	GCNNNNNNNGC	7 cut(s)	350, 866, 875, 1156, 1564, 1751, 1922
BstNI	CCWGG	2 cut(s)	346, 1241
BstNSI	RCATGY	5 cut(s)	275, 607, 907, 985, 2269
BstSCI	CCNGG	5 cut(s)	344, 1239, 1291, 1399, 1895
BstSFI	CTRYAG	3 cut(s)	609, 709, 1519
BstSLI	GKGCMC	2 cut(s)	1167, 1952
BstV1I	GCAGC	7 cut(s)	862, 1709, 2124, 2207, 2229, 2281, 2284
BstV2I	GAAGAC	1 cut(s)	291
BstX2I	RGATCY	2 cut(s)	699, 1302
BstYI	RGATCY	2 cut(s)	699, 1302
Bsu15I	ATCGAT	1 cut(s)	1122
Bsu36I	CCTNAGG	1 cut(s)	1340
BsuRI	GGCC	4 cut(s)	761, 1754, 1968, 2091
BsuTUI	ATCGAT	1 cut(s)	1122
BtgI	CCRYGG	1 cut(s)	1430
BtgZI	GCGATG	1 cut(s)	1148
BtrI	CACGTC	1 cut(s)	148
BtsCI	GGATG	4 cut(s)	202, 316, 795, 2308
BtsI	GCAGTG	1 cut(s)	864
BtsIMutI	CAGTG	3 cut(s)	165, 864, 1606
BveI	ACCTGC	1 cut(s)	785
Cac8I	GCNNGC	7 cut(s)	496, 709, 1353, 1441, 1560, 1756, 2089
ClaI	ATCGAT	1 cut(s)	1122
CseI	GACGC	3 cut(s)	487, 849, 1936
Csp6I	GTAC	5 cut(s)	334, 1069, 1258, 1627, 2408
CspCI	CAANNNNNGTGG	2 cut(s)	1263, 1298
CviQI	GTAC	5 cut(s)	334, 1069, 1258, 1627, 2408
DpnI	GATC	8 cut(s)	188, 260, 320, 474, 701, 996, 1304, 1382
DpnII	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
DraIII	CACNNNGTG	2 cut(s)	757, 1171
EaeI	YGGCCR	2 cut(s)	759, 1966
Eam1104I	CTCTTC	3 cut(s)	210, 582, 2417
EarI	CTCTTC	3 cut(s)	210, 582, 2417
EciI	GGCGGA	1 cut(s)	454
Eco130I	CCWWGG	5 cut(s)	231, 738, 888, 1317, 1430
Eco57I	CTGAAG	2 cut(s)	7, 2036
Eco81I	CCTNAGG	1 cut(s)	1340
EcoRII	CCWGG	2 cut(s)	344, 1239
EcoT14I	CCWWGG	5 cut(s)	231, 738, 888, 1317, 1430
EcoT22I	ATGCAT	1 cut(s)	905
ErhI	CCWWGG	5 cut(s)	231, 738, 888, 1317, 1430
FalI	AAGNNNNNCTT	4 cut(s)	1556, 1588, 2315, 2347
FaqI	GGGAC	5 cut(s)	814, 932, 1220, 1242, 1622
FauI	CCCGC	1 cut(s)	1219
FblI	GTMKAC	2 cut(s)	801, 966
Fnu4HI	GCNGC	8 cut(s)	876, 1695, 1698, 2138, 2218, 2221, 2270, 2273
FokI	GGATG	4 cut(s)	209, 323, 802, 2315
Fsp4HI	GCNGC	8 cut(s)	876, 1695, 1698, 2138, 2218, 2221, 2270, 2273
FspBI	CTAG	5 cut(s)	1370, 1454, 1568, 2024, 2063
GluI	GCNGC	8 cut(s)	876, 1695, 1698, 2138, 2218, 2221, 2270, 2273
GsaI	CCCAGC	1 cut(s)	1096
GsuI	CTGGAG	1 cut(s)	809
HaeIII	GGCC	4 cut(s)	761, 1754, 1968, 2091
HapII	CCGG	7 cut(s)	857, 1034, 1153, 1251, 1292, 1401, 1896
HgaI	GACGC	3 cut(s)	487, 849, 1936
Hin1I	GRCGYC	1 cut(s)	860
HincII	GTYRAC	4 cut(s)	802, 967, 1537, 1765
HindII	GTYRAC	4 cut(s)	802, 967, 1537, 1765
HindIII	AAGCTT	3 cut(s)	812, 1353, 2329
HpaI	GTTAAC	1 cut(s)	1537
HpaII	CCGG	7 cut(s)	857, 1034, 1153, 1251, 1292, 1401, 1896
HphI	GGTGA	2 cut(s)	375, 1499
Hpy166II	GTNNAC	7 cut(s)	277, 802, 864, 958, 967, 1537, 1765
Hpy188I	TCNGA	7 cut(s)	477, 654, 819, 1108, 1145, 2263, 2302
Hpy8I	GTNNAC	7 cut(s)	277, 802, 864, 958, 967, 1537, 1765
Hpy99I	CGWCG	4 cut(s)	242, 503, 506, 1930
HpyAV	CCTTC	5 cut(s)	405, 779, 1384, 1807, 2031
HpyCH4III	ACNGT	3 cut(s)	245, 1523, 2372
HpyCH4IV	ACGT	5 cut(s)	147, 1059, 1497, 1533, 1990
HpyF10VI	GCNNNNNNNGC	7 cut(s)	350, 866, 875, 1156, 1564, 1751, 1922
HpySE526I	ACGT	5 cut(s)	147, 1059, 1497, 1533, 1990
Hsp92I	GRCGYC	1 cut(s)	860
KspAI	GTTAAC	1 cut(s)	1537
Kzo9I	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
LmnI	GCTCC	4 cut(s)	226, 654, 1155, 2349
Lsp1109I	GCAGC	7 cut(s)	862, 1709, 2124, 2207, 2229, 2281, 2284
LweI	GCATC	1 cut(s)	2050
MaeI	CTAG	5 cut(s)	1370, 1454, 1568, 2024, 2063
MaeII	ACGT	5 cut(s)	147, 1059, 1497, 1533, 1990
MaeIII	GTNAC	4 cut(s)	539, 1246, 1287, 2372
MalI	GATC	8 cut(s)	188, 260, 320, 474, 701, 996, 1304, 1382
MboI	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
MfeI	CAATTG	1 cut(s)	1579
MflI	RGATCY	2 cut(s)	699, 1302
MhlI	GDGCHC	3 cut(s)	61, 1167, 1952
MlsI	TGGCCA	2 cut(s)	761, 1968
MluCI	AATT	9 cut(s)	389, 1086, 1463, 1579, 1641, 1905, 2282, 2382, 2424
MluNI	TGGCCA	2 cut(s)	761, 1968
MlyI	GAGTC	5 cut(s)	272, 674, 954, 1507, 1728
Mox20I	TGGCCA	2 cut(s)	761, 1968
Mph1103I	ATGCAT	1 cut(s)	905
MroXI	GAANNNNTTC	2 cut(s)	557, 813
MscI	TGGCCA	2 cut(s)	761, 1968
MseI	TTAA	9 cut(s)	78, 659, 719, 1041, 1188, 1197, 1536, 1785, 2318
MslI	CAYNNNNRTG	4 cut(s)	1133, 1599, 1955, 2046
Msp20I	TGGCCA	2 cut(s)	761, 1968
MspA1I	CMGCKG	2 cut(s)	2087, 2220
MspI	CCGG	7 cut(s)	857, 1034, 1153, 1251, 1292, 1401, 1896
MspR9I	CCNGG	5 cut(s)	346, 1241, 1293, 1401, 1897
MunI	CAATTG	1 cut(s)	1579
MvaI	CCWGG	2 cut(s)	346, 1241
MwoI	GCNNNNNNNGC	7 cut(s)	350, 866, 875, 1156, 1564, 1751, 1922
NciI	CCSGG	3 cut(s)	1293, 1401, 1897
NcoI	CCATGG	1 cut(s)	1430
NdeII	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
NlaIV	GGNNCC	1 cut(s)	222
NmuCI	GTSAC	3 cut(s)	539, 1246, 2372
NsiI	ATGCAT	1 cut(s)	905
NspI	RCATGY	5 cut(s)	275, 607, 907, 985, 2269
NspV	TTCGAA	2 cut(s)	618, 975
OliI	CACNNNNGTG	1 cut(s)	1955
PaqCI	CACCTGC	1 cut(s)	785
PciI	ACATGT	2 cut(s)	271, 981
PcsI	WCGNNNNNNNCGW	2 cut(s)	498, 972
PdmI	GAANNNNTTC	2 cut(s)	557, 813
PfeI	GAWTC	5 cut(s)	178, 380, 520, 2258, 2312
Pfl23II	CGTACG	1 cut(s)	333
PflMI	CCANNNNNTGG	1 cut(s)	1071
PkrI	GCNGC	8 cut(s)	877, 1696, 1699, 2139, 2219, 2222, 2271, 2274
Ple19I	CGATCG	2 cut(s)	189, 475
PleI	GAGTC	5 cut(s)	272, 674, 953, 1507, 1728
PpsI	GAGTC	5 cut(s)	272, 674, 953, 1507, 1728
PscI	ACATGT	2 cut(s)	271, 981
Psp6I	CCWGG	2 cut(s)	344, 1239
PspFI	CCCAGC	1 cut(s)	1092
PspGI	CCWGG	2 cut(s)	344, 1239
PspLI	CGTACG	1 cut(s)	333
PspN4I	GGNNCC	1 cut(s)	222
PstI	CTGCAG	1 cut(s)	713
PsuI	RGATCY	2 cut(s)	699, 1302
PvuI	CGATCG	2 cut(s)	189, 475
PvuII	CAGCTG	1 cut(s)	2220
RsaI	GTAC	5 cut(s)	335, 1070, 1259, 1628, 2409
RsaNI	GTAC	5 cut(s)	334, 1069, 1258, 1627, 2408
RseI	CAYNNNNRTG	4 cut(s)	1133, 1599, 1955, 2046
SalI	GTCGAC	2 cut(s)	800, 965
SaqAI	TTAA	9 cut(s)	78, 659, 719, 1041, 1188, 1197, 1536, 1785, 2318
SatI	GCNGC	8 cut(s)	876, 1695, 1698, 2138, 2218, 2221, 2270, 2273
Sau3AI	GATC	8 cut(s)	186, 258, 318, 472, 699, 994, 1302, 1380
ScaI	AGTACT	2 cut(s)	1070, 2409
SchI	GAGTC	5 cut(s)	272, 674, 954, 1507, 1728
ScrFI	CCNGG	5 cut(s)	346, 1241, 1293, 1401, 1897
SduI	GDGCHC	3 cut(s)	61, 1167, 1952
SfaNI	GCATC	1 cut(s)	2050
SfcI	CTRYAG	3 cut(s)	609, 709, 1519
SfuI	TTCGAA	2 cut(s)	618, 975
SmiMI	CAYNNNNRTG	4 cut(s)	1133, 1599, 1955, 2046
SmlI	CTYRAG	1 cut(s)	1553
SmoI	CTYRAG	1 cut(s)	1553
SpeI	ACTAGT	1 cut(s)	2062
Sse9I	AATT	9 cut(s)	389, 1086, 1463, 1579, 1641, 1905, 2282, 2382, 2424
SsiI	CCGC	8 cut(s)	113, 342, 465, 928, 1226, 1695, 2085, 2223
SspMI	CTAG	5 cut(s)	1370, 1454, 1568, 2024, 2063
StyD4I	CCNGG	5 cut(s)	344, 1239, 1291, 1399, 1895
StyI	CCWWGG	5 cut(s)	231, 738, 888, 1317, 1430
TaaI	ACNGT	3 cut(s)	245, 1523, 2372
TaiI	ACGT	5 cut(s)	150, 1062, 1500, 1536, 1993
TasI	AATT	9 cut(s)	389, 1086, 1463, 1579, 1641, 1905, 2282, 2382, 2424
TatI	WGTACW	3 cut(s)	1068, 1257, 2407
TauI	GCSGC	1 cut(s)	1697
TfiI	GAWTC	5 cut(s)	178, 380, 520, 2258, 2312
Tru1I	TTAA	9 cut(s)	78, 659, 719, 1041, 1188, 1197, 1536, 1785, 2318
Tru9I	TTAA	9 cut(s)	78, 659, 719, 1041, 1188, 1197, 1536, 1785, 2318
TscAI	CASTG	3 cut(s)	165, 871, 1606
TseFI	GTSAC	3 cut(s)	539, 1246, 2372
TseI	GCWGC	7 cut(s)	875, 1697, 2137, 2217, 2220, 2269, 2272
Tsp45I	GTSAC	3 cut(s)	539, 1246, 2372
TspGWI	ACGGA	2 cut(s)	909, 1644
TspRI	CASTG	3 cut(s)	165, 871, 1606
Van91I	CCANNNNNTGG	1 cut(s)	1071
XapI	RAATTY	2 cut(s)	1086, 1463
XbaI	TCTAGA	1 cut(s)	1369
XceI	RCATGY	5 cut(s)	275, 607, 907, 985, 2269
XcmI	CCANNNNNNNNNTGG	2 cut(s)	165, 431
XmiI	GTMKAC	2 cut(s)	801, 966
XmnI	GAANNNNTTC	2 cut(s)	557, 813
XspI	CTAG	5 cut(s)	1370, 1454, 1568, 2024, 2063
ZrmI	AGTACT	2 cut(s)	1070, 2409
Zsp2I	ATGCAT	1 cut(s)	905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.