Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

34390186 .. 34392030

Gene Structure 1845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0215400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGATGAGGAGGGACGAACTCCACATCAACGTGCCCAACCCCTTCCGCTGCCCCATCTCCATGGACGTCATGAGGTCTCCCGTCAGCCTCTCCACCGGCGTCACCTACGACCGCTCCAGCATCCAGCACTGGCTCGACGCCGGCCACGACACCTGTCCCGCCACCATGCAGATCCTCCAGTCCAAAGACTTCGTCCCCAACCTCAATCTCCGCCGTCTGATCAACCTCTGGGCCCAATCCCACGGCCCCATCTCCCCCGCCTCCTCTCCTACCCTCTCCGACCAACAGCTCCGCGGCCTCGTGCAATATCTCGCGAACGAGAACGAGAAGTTCAACCAGAATCTCTTCAATTCGTTGTCCAAGATGGTCGATTTCGCCAAGTCAAAGGACGAGAATCGCAGATTTCTGGCGAATTTCAACGGCTTCGTTCCTGCCGTCGTCGGCGTCTTGAACAGAGAAGGGGTCGAAATCGAGGTTCTGGAATTGGTGATGAGGCTTTTGGAGTTGATTTCGTCTCAAAACGGCGTCGTCGAGCAATTGCACCAATTGATCACCAAGAGCAACCGGAATTGCCTCTCTTCGATTCAATTGGTGTTGCAGAGTGGTAGTCTGAGCTCGAAGATCGAATCCGCCAGGGTTTTGGGTTCAATCGCGCTCGACGCCTACTCGAAACGATTAATCGCCGAGAAAGAGGGACTGTTGACCGTACTCAACGACCTGTTGACCTCAGAAACCGATCGGAGCTTGCACGACGTCGTTTTCTCGTGCTTGGTCTCGTTGTCGGTGACCCGGTCAGTCAAATCCGAACTCGTCCGGTTCGGACTCGTCCAATTCATAACGGAAACCCTCTCGAACCCTGACGTCAGCGCTTCCCTGGCGGAGAAGGCGATGAAGCTGTTGTCCAAGATTGCCACGTGCGCGGAGGGCAGGTCCGAGATAAGCGGGGAGCCGAAATGCGTGGCGGCGGTGGCGGAGAGGCTGATGAAGGGGTCGATGGCGGCGACGGAGGACGGCGTGGCGGTTTTGTGGAGCGTGTGTTGCATGTTGGGGGATAAGAGGGCTAGGGAGTGTGTAGGGAAGAGCAATGGGGTGGCTAAGATATTGCTTGTGATGCAGAGTGGGTATTGTGAAGGGCATTTCATGAGGAGGATGTGTGGGGATTTGATGAAGGTTTTGAGTGTTGGGTTGGGGATGGGGTTGAGCTATGACACCATGACCAAACATATCATGCCTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

412

Amino Acids

45.33

Weight (kDa)

7.95

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	11 - 81	1e-17	U-box domain
ARM_PUB	PF25598	111 - 396	7.8e-53	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	69, 756, 864
Acc36I	ACCTGC	1 cut(s)	918
AccBSI	CCGCTC	1 cut(s)	114
AccII	CGCG	4 cut(s)	294, 314, 653, 920
AclWI	GGATC	1 cut(s)	166
AcoI	YGGCCR	1 cut(s)	142
AcsI	RAATTY	1 cut(s)	412
AcvI	CACGTG	1 cut(s)	915
AcyI	GRCGYC	8 cut(s)	66, 99, 138, 444, 525, 660, 753, 861
AfaI	GTAC	1 cut(s)	708
AfeI	AGCGCT	1 cut(s)	868
AgsI	TTSAA	6 cut(s)	334, 349, 418, 451, 587, 648
AjnI	CCWGG	2 cut(s)	632, 873
AluBI	AGCT	5 cut(s)	289, 615, 744, 895, 1203
AluI	AGCT	5 cut(s)	289, 615, 744, 895, 1203
Alw21I	GWGCWC	1 cut(s)	617
Alw26I	GTCTC	3 cut(s)	81, 519, 778
AlwI	GGATC	1 cut(s)	166
Aor51HI	AGCGCT	1 cut(s)	868
AoxI	GGCC	4 cut(s)	142, 231, 244, 295
ApaI	GGGCCC	1 cut(s)	235
ApeKI	GCWGC	1 cut(s)	48
ApoI	RAATTY	1 cut(s)	412
ArsI	GACNNNNNNTTYG	2 cut(s)	177, 209
AseI	ATTAAT	1 cut(s)	677
Asp700I	GAANNNNTTC	1 cut(s)	344
AspLEI	GCGC	3 cut(s)	655, 869, 920
AspS9I	GGNCC	4 cut(s)	231, 232, 245, 930
AsuC2I	CCSGG	1 cut(s)	790
AsuHPI	GGTGA	4 cut(s)	94, 499, 544, 796
AvaII	GGWCC	1 cut(s)	930
BaeGI	GKGCMC	2 cut(s)	36, 235
BanII	GRGCYC	2 cut(s)	235, 617
BauI	CACGAG	2 cut(s)	299, 763
BbrPI	CACGTG	1 cut(s)	915
Bbv12I	GWGCWC	1 cut(s)	617
BbvI	GCAGC	1 cut(s)	35
BccI	CCATC	5 cut(s)	62, 257, 358, 988, 1186
BceAI	ACGGC	6 cut(s)	198, 259, 419, 436, 538, 1027
BciT130I	CCWGG	2 cut(s)	634, 875
BclI	TGATCA	2 cut(s)	219, 549
BcnI	CCSGG	1 cut(s)	790
BcoDI	GTCTC	3 cut(s)	81, 519, 778
BfaI	CTAG	1 cut(s)	1062
BfoI	RGCGCY	1 cut(s)	870
BfuAI	ACCTGC	1 cut(s)	918
BisI	GCNGC	4 cut(s)	49, 295, 963, 999
BlsI	GCNGC	4 cut(s)	50, 296, 964, 1000
Bme1390I	CCNGG	3 cut(s)	634, 790, 875
Bme18I	GGWCC	1 cut(s)	930
BmgT120I	GGNCC	4 cut(s)	231, 232, 245, 930
BmiI	GGNNCC	3 cut(s)	233, 247, 948
BmrFI	CCNGG	3 cut(s)	634, 790, 875
BmsI	GCATC	2 cut(s)	129, 1101
BoxI	GACNNNNGTC	1 cut(s)	153
BpmI	CTGGAG	2 cut(s)	100, 161
BpuMI	CCSGG	1 cut(s)	790
BsaAI	YACGTR	1 cut(s)	915
BsaHI	GRCGYC	8 cut(s)	66, 99, 138, 444, 525, 660, 753, 861
BsaI	GGTCTC	2 cut(s)	81, 778
BsaJI	CCNNGG	5 cut(s)	60, 241, 292, 633, 873
BsaWI	WCCGGW	2 cut(s)	564, 813
BsaXI	ACNNNNNCTCC	8 cut(s)	98, 128, 914, 944, 1021, 1051, 1138, 1168
Bse118I	RCCGGY	2 cut(s)	95, 140
Bse1I	ACTGG	2 cut(s)	134, 178
Bse3DI	GCAATG	1 cut(s)	1090
BseBI	CCWGG	2 cut(s)	634, 875
BseDI	CCNNGG	5 cut(s)	60, 241, 292, 633, 873
BseGI	GGATG	3 cut(s)	120, 1155, 1197
BseMI	GCAATG	1 cut(s)	1090
BseMII	CTCAG	2 cut(s)	602, 741
BseNI	ACTGG	2 cut(s)	134, 178
BseRI	GAGGAG	3 cut(s)	22, 253, 1159
BseSI	GKGCMC	2 cut(s)	36, 235
BseXI	GCAGC	1 cut(s)	35
Bsh1236I	CGCG	4 cut(s)	294, 314, 653, 920
Bsh1285I	CGRYCG	2 cut(s)	112, 739
BshFI	GGCC	4 cut(s)	144, 233, 246, 297
BsiEI	CGRYCG	2 cut(s)	112, 739
BsiHKAI	GWGCWC	1 cut(s)	617
BsiSI	CCGG	5 cut(s)	96, 141, 565, 790, 814
BslFI	GGGAC	4 cut(s)	26, 141, 179, 708
BsmAI	GTCTC	3 cut(s)	81, 519, 778
BsmBI	CGTCTC	1 cut(s)	519
BsmFI	GGGAC	4 cut(s)	26, 141, 179, 708
BsnI	GGCC	4 cut(s)	144, 233, 246, 297
Bso31I	GGTCTC	2 cut(s)	81, 778
Bsp120I	GGGCCC	1 cut(s)	231
Bsp1286I	GDGCHC	3 cut(s)	36, 235, 617
Bsp143I	GATC	5 cut(s)	171, 219, 549, 621, 736
Bsp19I	CCATGG	1 cut(s)	60
Bsp68I	TCGCGA	1 cut(s)	314
BspANI	GGCC	4 cut(s)	144, 233, 246, 297
BspCNI	CTCAG	2 cut(s)	603, 740
BspFNI	CGCG	4 cut(s)	294, 314, 653, 920
BspHI	TCATGA	2 cut(s)	69, 1140
BspLI	GGNNCC	3 cut(s)	233, 247, 948
BspMI	ACCTGC	1 cut(s)	918
BspPI	GGATC	1 cut(s)	166
BspQI	GCTCTTC	1 cut(s)	1073
BspTNI	GGTCTC	2 cut(s)	81, 778
BsrBI	CCGCTC	1 cut(s)	114
BsrDI	GCAATG	1 cut(s)	1090
BsrFI	RCCGGY	2 cut(s)	95, 140
BsrI	ACTGG	2 cut(s)	134, 178
BssAI	RCCGGY	2 cut(s)	95, 140
BssECI	CCNNGG	5 cut(s)	60, 241, 292, 633, 873
BssMI	GATC	5 cut(s)	171, 219, 549, 621, 736
BssNI	GRCGYC	8 cut(s)	66, 99, 138, 444, 525, 660, 753, 861
BssSI	CACGAG	2 cut(s)	299, 763
BssT1I	CCWWGG	1 cut(s)	60
Bst2BI	CACGAG	2 cut(s)	299, 763
Bst2UI	CCWGG	2 cut(s)	634, 875
Bst4CI	ACNGT	2 cut(s)	699, 706
Bst6I	CTCTTC	3 cut(s)	350, 583, 1073
BstACI	GRCGYC	8 cut(s)	66, 99, 138, 444, 525, 660, 753, 861
BstBAI	YACGTR	1 cut(s)	915
BstC8I	GCNNGC	2 cut(s)	142, 746
BstDEI	CTNAG	3 cut(s)	611, 727, 1095
BstDSI	CCRYGG	3 cut(s)	60, 241, 292
BstEII	GGTNACC	1 cut(s)	784
BstF5I	GGATG	3 cut(s)	120, 1155, 1197
BstFNI	CGCG	4 cut(s)	294, 314, 653, 920
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	3 cut(s)	655, 869, 920
BstKTI	GATC	5 cut(s)	174, 222, 552, 624, 739
BstMAI	GTCTC	3 cut(s)	81, 519, 778
BstMBI	GATC	5 cut(s)	171, 219, 549, 621, 736
BstMCI	CGRYCG	2 cut(s)	112, 739
BstMWI	GCNNNNNNNGC	8 cut(s)	659, 875, 884, 917, 924, 968, 1038, 1111
BstNI	CCWGG	2 cut(s)	634, 875
BstNSI	RCATGY	1 cut(s)	1045
BstPAI	GACNNNNGTC	1 cut(s)	153
BstPI	GGTNACC	1 cut(s)	784
BstSCI	CCNGG	3 cut(s)	632, 788, 873
BstSLI	GKGCMC	2 cut(s)	36, 235
BstUI	CGCG	4 cut(s)	294, 314, 653, 920
BstV1I	GCAGC	1 cut(s)	35
BstX2I	RGATCY	1 cut(s)	171
BstXI	CCANNNNNNTGG	2 cut(s)	61, 640
BstYI	RGATCY	1 cut(s)	171
BsuRI	GGCC	4 cut(s)	144, 233, 246, 297
BtgI	CCRYGG	3 cut(s)	60, 241, 292
BtgZI	GCGATG	1 cut(s)	902
BtsCI	GGATG	3 cut(s)	120, 1155, 1197
BtsIMutI	CAGTG	1 cut(s)	127
BtuMI	TCGCGA	1 cut(s)	314
BveI	ACCTGC	1 cut(s)	918
Cac8I	GCNNGC	2 cut(s)	142, 746
CciI	TCATGA	2 cut(s)	69, 1140
CfoI	GCGC	3 cut(s)	655, 869, 920
Cfr10I	RCCGGY	2 cut(s)	95, 140
Cfr13I	GGNCC	4 cut(s)	231, 232, 245, 930
Cfr42I	CCGCGG	1 cut(s)	295
CseI	GACGC	5 cut(s)	88, 146, 433, 514, 668
Csp6I	GTAC	1 cut(s)	707
CviAII	CATG	7 cut(s)	61, 70, 166, 1042, 1141, 1213, 1228
CviQI	GTAC	1 cut(s)	707
DdeI	CTNAG	3 cut(s)	611, 727, 1095
DpnI	GATC	5 cut(s)	173, 221, 551, 623, 738
DpnII	GATC	5 cut(s)	171, 219, 549, 621, 736
EaeI	YGGCCR	1 cut(s)	142
Eam1104I	CTCTTC	3 cut(s)	350, 583, 1073
EarI	CTCTTC	3 cut(s)	350, 583, 1073
EciI	GGCGGA	4 cut(s)	200, 619, 893, 986
Ecl136II	GAGCTC	1 cut(s)	615
Eco130I	CCWWGG	1 cut(s)	60
Eco24I	GRGCYC	2 cut(s)	235, 617
Eco31I	GGTCTC	2 cut(s)	81, 778
Eco47I	GGWCC	1 cut(s)	930
Eco47III	AGCGCT	1 cut(s)	868
Eco53kI	GAGCTC	1 cut(s)	615
Eco72I	CACGTG	1 cut(s)	915
Eco91I	GGTNACC	1 cut(s)	784
EcoICRI	GAGCTC	1 cut(s)	615
EcoO65I	GGTNACC	1 cut(s)	784
EcoRII	CCWGG	2 cut(s)	632, 873
EcoT14I	CCWWGG	1 cut(s)	60
EcoT38I	GRGCYC	2 cut(s)	235, 617
ErhI	CCWWGG	1 cut(s)	60
Esp3I	CGTCTC	1 cut(s)	519
FaeI	CATG	7 cut(s)	64, 73, 169, 1045, 1144, 1216, 1231
FaqI	GGGAC	4 cut(s)	26, 141, 179, 708
FatI	CATG	7 cut(s)	60, 69, 165, 1041, 1140, 1212, 1227
FauI	CCCGC	3 cut(s)	166, 265, 935
FbaI	TGATCA	2 cut(s)	219, 549
Fnu4HI	GCNGC	4 cut(s)	49, 295, 963, 999
FokI	GGATG	3 cut(s)	107, 1162, 1204
FriOI	GRGCYC	2 cut(s)	235, 617
Fsp4HI	GCNGC	4 cut(s)	49, 295, 963, 999
FspBI	CTAG	1 cut(s)	1062
GlaI	GCGC	3 cut(s)	654, 868, 919
GluI	GCNGC	4 cut(s)	49, 295, 963, 999
GsuI	CTGGAG	2 cut(s)	100, 161
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	4 cut(s)	144, 233, 246, 297
HapII	CCGG	5 cut(s)	96, 141, 565, 790, 814
HgaI	GACGC	5 cut(s)	88, 146, 433, 514, 668
HhaI	GCGC	3 cut(s)	655, 869, 920
Hin1I	GRCGYC	8 cut(s)	66, 99, 138, 444, 525, 660, 753, 861
Hin1II	CATG	7 cut(s)	64, 73, 169, 1045, 1144, 1216, 1231
Hin6I	GCGC	3 cut(s)	653, 867, 918
HinP1I	GCGC	3 cut(s)	653, 867, 918
HincII	GTYRAC	2 cut(s)	702, 723
HindII	GTYRAC	2 cut(s)	702, 723
HinfI	GANTC	5 cut(s)	340, 394, 583, 626, 822
HpaII	CCGG	5 cut(s)	96, 141, 565, 790, 814
HphI	GGTGA	4 cut(s)	94, 499, 544, 796
Hpy166II	GTNNAC	2 cut(s)	702, 723
Hpy188I	TCNGA	8 cut(s)	219, 280, 612, 730, 741, 805, 821, 934
Hpy188III	TCNNGA	6 cut(s)	70, 313, 448, 479, 850, 1141
Hpy8I	GTNNAC	2 cut(s)	702, 723
Hpy99I	CGWCG	9 cut(s)	140, 440, 443, 530, 533, 662, 755, 758, 1006
HpyAV	CCTTC	6 cut(s)	52, 452, 877, 979, 1124, 1162
HpyCH4III	ACNGT	2 cut(s)	699, 706
HpyCH4IV	ACGT	5 cut(s)	30, 66, 753, 861, 914
HpyCH4V	TGCA	7 cut(s)	169, 304, 541, 598, 748, 1041, 1114
HpyF10VI	GCNNNNNNNGC	8 cut(s)	659, 875, 884, 917, 924, 968, 1038, 1111
HpyF3I	CTNAG	3 cut(s)	611, 727, 1095
HpySE526I	ACGT	5 cut(s)	30, 66, 753, 861, 914
Hsp92I	GRCGYC	8 cut(s)	66, 99, 138, 444, 525, 660, 753, 861
Hsp92II	CATG	7 cut(s)	64, 73, 169, 1045, 1144, 1216, 1231
HspAI	GCGC	3 cut(s)	653, 867, 918
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
Ksp22I	TGATCA	2 cut(s)	219, 549
KspI	CCGCGG	1 cut(s)	295
Kzo9I	GATC	5 cut(s)	171, 219, 549, 621, 736
LguI	GCTCTTC	1 cut(s)	1073
LmnI	GCTCC	5 cut(s)	119, 294, 741, 946, 1029
Lsp1109I	GCAGC	1 cut(s)	35
LweI	GCATC	2 cut(s)	129, 1101
MaeI	CTAG	1 cut(s)	1062
MaeII	ACGT	5 cut(s)	30, 66, 753, 861, 914
MaeIII	GTNAC	2 cut(s)	100, 784
MalI	GATC	5 cut(s)	173, 221, 551, 623, 738
MbiI	CCGCTC	1 cut(s)	114
MboI	GATC	5 cut(s)	171, 219, 549, 621, 736
MboII	GAAGA	4 cut(s)	337, 570, 631, 1090
MfeI	CAATTG	3 cut(s)	536, 545, 587
MflI	RGATCY	1 cut(s)	171
MhlI	GDGCHC	3 cut(s)	36, 235, 617
MluCI	AATT	8 cut(s)	349, 412, 482, 536, 545, 568, 587, 830
MlyI	GAGTC	1 cut(s)	816
MmeI	TCCRAC	1 cut(s)	303
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	1 cut(s)	344
MseI	TTAA	1 cut(s)	677
MslI	CAYNNNNRTG	2 cut(s)	29, 59
MspA1I	CMGCKG	2 cut(s)	48, 294
MspI	CCGG	5 cut(s)	96, 141, 565, 790, 814
MspR9I	CCNGG	3 cut(s)	634, 790, 875
MunI	CAATTG	3 cut(s)	536, 545, 587
MvaI	CCWGG	2 cut(s)	634, 875
MvnI	CGCG	4 cut(s)	294, 314, 653, 920
MwoI	GCNNNNNNNGC	8 cut(s)	659, 875, 884, 917, 924, 968, 1038, 1111
NaeI	GCCGGC	1 cut(s)	142
NciI	CCSGG	1 cut(s)	790
NcoI	CCATGG	1 cut(s)	60
NdeII	GATC	5 cut(s)	171, 219, 549, 621, 736
NgoMIV	GCCGGC	1 cut(s)	140
NlaIII	CATG	7 cut(s)	64, 73, 169, 1045, 1144, 1216, 1231
NlaIV	GGNNCC	3 cut(s)	233, 247, 948
NmeAIII	GCCGAG	1 cut(s)	709
NmuCI	GTSAC	2 cut(s)	100, 784
NruI	TCGCGA	1 cut(s)	314
NspI	RCATGY	1 cut(s)	1045
PagI	TCATGA	2 cut(s)	69, 1140
PciSI	GCTCTTC	1 cut(s)	1073
PcsI	WCGNNNNNNNCGW	4 cut(s)	144, 432, 528, 998
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	1 cut(s)	344
PfeI	GAWTC	4 cut(s)	340, 394, 583, 626
PflFI	GACNNNGTC	2 cut(s)	191, 790
PkrI	GCNGC	4 cut(s)	50, 296, 964, 1000
Ple19I	CGATCG	1 cut(s)	739
PleI	GAGTC	1 cut(s)	816
PmaCI	CACGTG	1 cut(s)	915
PmlI	CACGTG	1 cut(s)	915
PpsI	GAGTC	1 cut(s)	816
Ppu21I	YACGTR	1 cut(s)	915
PshAI	GACNNNNGTC	1 cut(s)	153
PshBI	ATTAAT	1 cut(s)	677
Psp124BI	GAGCTC	1 cut(s)	617
Psp6I	CCWGG	2 cut(s)	632, 873
PspCI	CACGTG	1 cut(s)	915
PspEI	GGTNACC	1 cut(s)	784
PspGI	CCWGG	2 cut(s)	632, 873
PspN4I	GGNNCC	3 cut(s)	233, 247, 948
PspOMI	GGGCCC	1 cut(s)	231
PspPI	GGNCC	4 cut(s)	231, 232, 245, 930
PsuI	RGATCY	1 cut(s)	171
PsyI	GACNNNGTC	2 cut(s)	191, 790
PvuI	CGATCG	1 cut(s)	739
RruI	TCGCGA	1 cut(s)	314
RsaI	GTAC	1 cut(s)	708
RsaNI	GTAC	1 cut(s)	707
RseI	CAYNNNNRTG	2 cut(s)	29, 59
SacI	GAGCTC	1 cut(s)	617
SacII	CCGCGG	1 cut(s)	295
SapI	GCTCTTC	1 cut(s)	1073
SaqAI	TTAA	1 cut(s)	677
SatI	GCNGC	4 cut(s)	49, 295, 963, 999
Sau3AI	GATC	5 cut(s)	171, 219, 549, 621, 736
Sau96I	GGNCC	4 cut(s)	231, 232, 245, 930
SchI	GAGTC	1 cut(s)	816
ScrFI	CCNGG	3 cut(s)	634, 790, 875
SduI	GDGCHC	3 cut(s)	36, 235, 617
SfaNI	GCATC	2 cut(s)	129, 1101
Sfr303I	CCGCGG	1 cut(s)	295
SgrAI	CRCCGGYG	1 cut(s)	95
SgrBI	CCGCGG	1 cut(s)	295
SinI	GGWCC	1 cut(s)	930
SmiMI	CAYNNNNRTG	2 cut(s)	29, 59
Sse9I	AATT	8 cut(s)	349, 412, 482, 536, 545, 568, 587, 830
SspMI	CTAG	1 cut(s)	1062
SstI	GAGCTC	1 cut(s)	617
StyD4I	CCNGG	3 cut(s)	632, 788, 873
StyI	CCWWGG	1 cut(s)	60
TaaI	ACNGT	2 cut(s)	699, 706
TaiI	ACGT	5 cut(s)	33, 69, 756, 864, 917
TasI	AATT	8 cut(s)	349, 412, 482, 536, 545, 568, 587, 830
TauI	GCSGC	3 cut(s)	297, 965, 1001
TfiI	GAWTC	4 cut(s)	340, 394, 583, 626
Tru1I	TTAA	1 cut(s)	677
Tru9I	TTAA	1 cut(s)	677
TscAI	CASTG	1 cut(s)	134
TseFI	GTSAC	2 cut(s)	100, 784
TseI	GCWGC	1 cut(s)	48
Tsp45I	GTSAC	2 cut(s)	100, 784
TspDTI	ATGAA	5 cut(s)	823, 905, 998, 1129, 1181
TspGWI	ACGGA	2 cut(s)	854, 1019
TspRI	CASTG	1 cut(s)	134
Tth111I	GACNNNGTC	2 cut(s)	191, 790
VpaK11BI	GGWCC	1 cut(s)	930
VspI	ATTAAT	1 cut(s)	677
XapI	RAATTY	1 cut(s)	412
XceI	RCATGY	1 cut(s)	1045
XmnI	GAANNNNTTC	1 cut(s)	344
XspI	CTAG	1 cut(s)	1062
ZraI	GACGTC	3 cut(s)	67, 754, 862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.