Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

21058645 .. 21064950

Gene Structure 6306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G239900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGCTGGGGTCTATGGAGGACGGAGAGATCACAGTGTCAGCATACGACACCGCTTGGGTGGCTCTGGTGGAAGATGTGGAGGGAAGTGGCTTGCCTCAGTTCCCCTCCAGCCTCGAATGGATTGCCAACAATCAGCTCCCAGATGGCTCTTGGGGAGATAGTGAAATTTTCACTGCTCACGATCGCATCATCAACACCATAGCTTGTGTTGTTGCTTTAAAAACATGGAACGTTCATCCCGACAAATGTGAAAAAGGAATGGCATATTTCAAGGAAAACATAAACAAGCTTGGGAACGAGAATGCCCAACACATGCCTATCGGGTTTGAAGTTGCTTTTCCTTCGATTCTTGAAATAGCTCGAAGTTTAAACCTGGAAGTACCTGACGACTGTGCAGTGCTGCATGAGATTTATGCCATGAGAAATCTTAAGCTCACAAAGATACCGAGGGACATAATGCACAAAGTGCCCACGACATTACTTCACAGCTTGGAAGGAATGGCAGGTTTGGACTGGAAAAAGCTTCTAAAACTGCAGTCCCAAGATGGCTCTTTCTTGTTCTCTCCGGCCTCCACTGCCTATGCTCTCATGCGGACCAAAGACTCCAAATGCATGACTTATTTGGCAAAAGCTGTTCACAAGTTCAATGGGGGAGTCCCTAATGTGTACCCAGTGGACTTGTTCGAACATGTATGGGTTGTGGATCGGCTGCAGCGCTTAGGAATATCTAGATATTTCGAGCCACAAATTAAGGAATGTATTAATTACGTCAACAGATACTGGACTGAGAAAGGAATTTGTTGGGCAAGAAATTCCGAGGTACAGGACATTGATGACACTGCCATGGCATTCAGACTGCTCAGGTTGCATGGCCACCATGTGTCTGCTGATGTGTTTGAGCACTTCAAGAAGGGCAACGAGTTCATCTGCTTTGCTGGACAAAGCACACAAGCGGTGACTGGAATGTACAACTTGTTCAGGGCTAGTCAAGTTTTGTTCCCTGGAGAAAACATCCTCGAGGAGGCTAAGGATTTTTCAACCAAATTTCTGAGAGAAAAACAAGCTTCCGATGAGCTGCTAGACAAATGGATCATCACCAAGGACTTGCCTGGCGAGGTGGGGTACGCACTGGAAGTTCCATGGTATGCGAGCTTACCTCGACTGGAGACCAGATTCTTCATCGAACAGTATGGTGGCCGGGATGACGTCTGGATTGGCAAGACTCTATACAGGATGCCCTACGTAAACAATAATGTCTACCTCGAGCTGGCAAAACTTGACTACAACAATTGCCAAGCACTGCATCTGATCGAATGGGACAACATTCAAAAGTGGTACGCAGAATGTAGACTTGAAGACTACGGATTGAGCAGAAGAAGCCTCCTCATGGCTTATTTTGTTGCTGCAGCAAGTATTTTTGAACCAGAAAGAGCAAACGAGAGAGTTGCATGGGCTAAAACGACATGCTTGATTGAAACAGTCGGGTGTCATTTCAAGGAAGAAACTTATGAGCAGAGGGGGGCCTTTGTACATGAATTCAGAACTAGGAAGATGAATACAAACAAGAAAAGGCAAGGACTTATTGAGACCTTGATGGCAACTCTACACCACTTCTCATTGGACGCAATGGTGGCTCATGGTCATGACATTAGCCATCCTCTACGCCAAGCTTGGGAAAAGTGGCTTACGAAGTGGCAAGAGAAAGGGGACATTCACCAAGATGAAGCTGAGCTACTGGTGGAAACGATAAATCAGACCGCTGGCTTTTCAATCCCAGAAGGGTTGTTGTTGTCCAATCCAGAGCATGGGCAACTTTTTAGCATCACTAACAGTGTTTGCAATAAACTACACTCCTACCAAAACCAAAAGCACAAGGTAAATGAAAATGGGAGTTGTTCCTTGAAAATCCAAGAAATAGAATCAGAAATTCAACAACTTGTGAAAATGATGCTCGAAAACCCTTCGGACGACATACACTCTTCGATCAAGCAAACCTTTTTCGTGGTCGCGAGGAGCTTTTACTATTCTGCCTACTATGATCCTGGAACCATTAACCACCACCTTACCAAAGTGTTCTTCGAGCGAGTAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

698

Amino Acids

80.17

Weight (kDa)

5.81

Isoelectric Point (pI)

40.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1209
AbsI	CCTCGAGG	1 cut(s)	1016
Acc36I	ACCTGC	1 cut(s)	494
AccB7I	CCANNNNNTGG	1 cut(s)	1805
AccI	GTMKAC	2 cut(s)	1257, 1348
AccII	CGCG	1 cut(s)	2009
AciI	CCGC	4 cut(s)	51, 592, 953, 1758
AclI	AACGTT	1 cut(s)	231
AclWI	GGATC	3 cut(s)	711, 1097, 2033
AcoI	YGGCCR	2 cut(s)	871, 1195
AcsI	RAATTY	6 cut(s)	165, 795, 811, 1043, 1535, 1926
AcyI	GRCGYC	1 cut(s)	1206
AdeI	CACNNNGTG	2 cut(s)	466, 880
AfaI	GTAC	7 cut(s)	381, 668, 822, 968, 1124, 1337, 1530
AfeI	AGCGCT	1 cut(s)	716
AfiI	CCNNNNNNNGG	5 cut(s)	1021, 1267, 1387, 1672, 1805
AflII	CTTAAG	1 cut(s)	428
AflIII	ACRYGT	1 cut(s)	688
AjnI	CCWGG	4 cut(s)	372, 1000, 1108, 2041
AjuI	GAANNNNNNNTTGG	2 cut(s)	2060, 2092
Alw21I	GWGCWC	1 cut(s)	903
Alw26I	GTCTC	2 cut(s)	1160, 1580
AlwI	GGATC	3 cut(s)	711, 1097, 2033
AlwNI	CAGNNNCTG	1 cut(s)	780
Ama87I	CYCGRG	2 cut(s)	1016, 1262
Aor51HI	AGCGCT	1 cut(s)	716
AoxI	GGCC	4 cut(s)	567, 871, 1195, 1521
ApeKI	GCWGC	6 cut(s)	400, 709, 712, 1075, 1403, 1406
ApoI	RAATTY	6 cut(s)	165, 795, 811, 1043, 1535, 1926
AseI	ATTAAT	1 cut(s)	762
AspLEI	GCGC	1 cut(s)	717
AspS9I	GGNCC	2 cut(s)	594, 1521
AsuC2I	CCSGG	1 cut(s)	1199
AsuHPI	GGTGA	3 cut(s)	967, 1087, 1706
AsuII	TTCGAA	1 cut(s)	684
AvaI	CYCGRG	2 cut(s)	1016, 1262
AvaII	GGWCC	1 cut(s)	594
BaeGI	GKGCMC	1 cut(s)	471
BalI	TGGCCA	1 cut(s)	873
BarI	GAAGNNNNNNTAC	2 cut(s)	1716, 1748
BbsI	GAAGAC	1 cut(s)	1362
Bbv12I	GWGCWC	1 cut(s)	903
BbvI	GCAGC	6 cut(s)	387, 696, 724, 1062, 1390, 1418
BccI	CCATC	4 cut(s)	137, 539, 1588, 1662
BcgI	CGANNNNNNTGC	4 cut(s)	104, 138, 1427, 1461
BciT130I	CCWGG	4 cut(s)	374, 1002, 1110, 2043
BcnI	CCSGG	1 cut(s)	1199
BcoDI	GTCTC	2 cut(s)	1160, 1580
BfaI	CTAG	4 cut(s)	729, 984, 1079, 1545
BfmI	CTRYAG	3 cut(s)	533, 710, 1404
BfoI	RGCGCY	1 cut(s)	718
BfrI	CTTAAG	1 cut(s)	428
BfuAI	ACCTGC	1 cut(s)	494
BisI	GCNGC	6 cut(s)	401, 710, 713, 1076, 1404, 1407
BlpI	GCTNAGC	1 cut(s)	1728
BlsI	GCNGC	6 cut(s)	402, 711, 714, 1077, 1405, 1408
Bme1390I	CCNGG	5 cut(s)	374, 1002, 1110, 1199, 2043
Bme18I	GGWCC	1 cut(s)	594
BmeT110I	CYCGRG	2 cut(s)	1016, 1262
BmgT120I	GGNCC	2 cut(s)	594, 1521
BmiI	GGNNCC	2 cut(s)	1522, 2047
BmrFI	CCNGG	5 cut(s)	374, 1002, 1110, 1199, 2043
BmrI	ACTGGG	1 cut(s)	665
BmsI	GCATC	5 cut(s)	195, 1224, 1312, 1830, 1938
BmuI	ACTGGG	1 cut(s)	665
BpiI	GAAGAC	1 cut(s)	1362
BplI	GAGNNNNNCTC	2 cut(s)	1141, 1173
BpmI	CTGGAG	3 cut(s)	91, 1023, 1184
Bpu10I	CCTNAGC	3 cut(s)	718, 860, 1026
Bpu1102I	GCTNAGC	1 cut(s)	1728
Bpu14I	TTCGAA	1 cut(s)	684
BpuMI	CCSGG	1 cut(s)	1199
BsaAI	YACGTR	1 cut(s)	1243
BsaHI	GRCGYC	1 cut(s)	1206
BsaI	GGTCTC	2 cut(s)	1160, 1580
BsaJI	CCNNGG	6 cut(s)	446, 816, 843, 1000, 1098, 1139
Bsc4I	CCNNNNNNNGG	5 cut(s)	1021, 1267, 1387, 1672, 1805
Bse1I	ACTGG	7 cut(s)	518, 671, 785, 964, 1134, 1167, 1740
Bse3DI	GCAATG	1 cut(s)	1632
BseBI	CCWGG	4 cut(s)	374, 1002, 1110, 2043
BseDI	CCNNGG	6 cut(s)	446, 816, 843, 1000, 1098, 1139
BseGI	GGATG	5 cut(s)	235, 1011, 1207, 1239, 1654
BseLI	CCNNNNNNNGG	5 cut(s)	1021, 1267, 1387, 1672, 1805
BseMI	GCAATG	1 cut(s)	1632
BseMII	CTCAG	5 cut(s)	110, 777, 874, 1040, 1719
BseNI	ACTGG	7 cut(s)	518, 671, 785, 964, 1134, 1167, 1740
BseRI	GAGGAG	3 cut(s)	1034, 1373, 2026
BseSI	GKGCMC	1 cut(s)	471
BseXI	GCAGC	6 cut(s)	387, 696, 724, 1062, 1390, 1418
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	1 cut(s)	414
Bsh1236I	CGCG	1 cut(s)	2009
Bsh1285I	CGRYCG	1 cut(s)	184
BshFI	GGCC	4 cut(s)	569, 873, 1197, 1523
BsiEI	CGRYCG	1 cut(s)	184
BsiHKAI	GWGCWC	1 cut(s)	903
BsiHKCI	CYCGRG	2 cut(s)	1016, 1262
BsiSI	CCGG	2 cut(s)	566, 1198
BslFI	GGGAC	5 cut(s)	464, 523, 641, 1331, 1721
BslI	CCNNNNNNNGG	5 cut(s)	1021, 1267, 1387, 1672, 1805
BsmAI	GTCTC	2 cut(s)	1160, 1580
BsmFI	GGGAC	5 cut(s)	464, 523, 641, 1331, 1721
BsmI	GAATGC	2 cut(s)	307, 848
BsnI	GGCC	4 cut(s)	569, 873, 1197, 1523
Bso31I	GGTCTC	2 cut(s)	1160, 1580
BsoBI	CYCGRG	2 cut(s)	1016, 1262
Bsp119I	TTCGAA	1 cut(s)	684
Bsp1286I	GDGCHC	2 cut(s)	471, 903
Bsp1407I	TGTACA	2 cut(s)	966, 1528
Bsp143I	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
Bsp1720I	GCTNAGC	1 cut(s)	1728
Bsp19I	CCATGG	2 cut(s)	843, 1139
Bsp68I	TCGCGA	1 cut(s)	2009
BspACI	CCGC	4 cut(s)	51, 592, 953, 1758
BspANI	GGCC	4 cut(s)	569, 873, 1197, 1523
BspCNI	CTCAG	5 cut(s)	109, 778, 873, 1041, 1720
BspFNI	CGCG	1 cut(s)	2009
BspHI	TCATGA	1 cut(s)	1642
BspLI	GGNNCC	2 cut(s)	1522, 2047
BspMAI	CTGCAG	3 cut(s)	537, 714, 1408
BspMI	ACCTGC	1 cut(s)	494
BspPI	GGATC	3 cut(s)	711, 1097, 2033
BspT104I	TTCGAA	1 cut(s)	684
BspTI	CTTAAG	1 cut(s)	428
BspTNI	GGTCTC	2 cut(s)	1160, 1580
BsrDI	GCAATG	1 cut(s)	1632
BsrGI	TGTACA	2 cut(s)	966, 1528
BsrI	ACTGG	7 cut(s)	518, 671, 785, 964, 1134, 1167, 1740
BssECI	CCNNGG	6 cut(s)	446, 816, 843, 1000, 1098, 1139
BssMI	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
BssNI	GRCGYC	1 cut(s)	1206
BssT1I	CCWWGG	3 cut(s)	843, 1098, 1139
Bst2UI	CCWGG	4 cut(s)	374, 1002, 1110, 2043
Bst4CI	ACNGT	5 cut(s)	34, 392, 1188, 1480, 1832
Bst6I	CTCTTC	1 cut(s)	1984
BstACI	GRCGYC	1 cut(s)	1206
BstAFI	CTTAAG	1 cut(s)	428
BstAPI	GCANNNNNTGC	1 cut(s)	466
BstAUI	TGTACA	2 cut(s)	966, 1528
BstBAI	YACGTR	1 cut(s)	1243
BstBI	TTCGAA	1 cut(s)	684
BstC8I	GCNNGC	4 cut(s)	92, 1150, 1269, 1762
BstDEI	CTNAG	7 cut(s)	96, 718, 786, 860, 1026, 1049, 1728
BstDSI	CCRYGG	2 cut(s)	843, 1139
BstENI	CCTNNNNNAGG	1 cut(s)	1019
BstF5I	GGATG	5 cut(s)	235, 1011, 1207, 1239, 1654
BstFNI	CGCG	1 cut(s)	2009
BstH2I	RGCGCY	1 cut(s)	718
BstHHI	GCGC	1 cut(s)	717
BstKTI	GATC	7 cut(s)	30, 184, 706, 1092, 1311, 1986, 2041
BstMAI	GTCTC	2 cut(s)	1160, 1580
BstMBI	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
BstMCI	CGRYCG	1 cut(s)	184
BstMWI	GCNNNNNNNGC	6 cut(s)	59, 466, 575, 865, 1377, 1631
BstNI	CCWGG	4 cut(s)	374, 1002, 1110, 2043
BstNSI	RCATGY	3 cut(s)	316, 692, 1467
BstSCI	CCNGG	5 cut(s)	372, 1000, 1108, 1197, 2041
BstSFI	CTRYAG	3 cut(s)	533, 710, 1404
BstSLI	GKGCMC	1 cut(s)	471
BstSNI	TACGTA	1 cut(s)	1243
BstUI	CGCG	1 cut(s)	2009
BstV1I	GCAGC	6 cut(s)	387, 696, 724, 1062, 1390, 1418
BstV2I	GAAGAC	1 cut(s)	1362
BsuRI	GGCC	4 cut(s)	569, 873, 1197, 1523
BtgI	CCRYGG	2 cut(s)	843, 1139
BtsCI	GGATG	5 cut(s)	235, 1011, 1207, 1239, 1654
BtsI	GCAGTG	5 cut(s)	171, 402, 573, 837, 1298
BtsIMutI	CAGTG	9 cut(s)	39, 171, 402, 573, 678, 837, 1127, 1298, 1837
BtuMI	TCGCGA	1 cut(s)	2009
BveI	ACCTGC	1 cut(s)	494
Cac8I	GCNNGC	4 cut(s)	92, 1150, 1269, 1762
CaiI	CAGNNNCTG	1 cut(s)	780
CciI	TCATGA	1 cut(s)	1642
CfoI	GCGC	1 cut(s)	717
Cfr13I	GGNCC	2 cut(s)	594, 1521
CseI	GACGC	1 cut(s)	1631
Csp6I	GTAC	7 cut(s)	380, 667, 821, 967, 1123, 1336, 1529
CviQI	GTAC	7 cut(s)	380, 667, 821, 967, 1123, 1336, 1529
DdeI	CTNAG	7 cut(s)	96, 718, 786, 860, 1026, 1049, 1728
DpnI	GATC	7 cut(s)	29, 183, 705, 1091, 1310, 1985, 2040
DpnII	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
DraI	TTTAAA	2 cut(s)	219, 369
DraIII	CACNNNGTG	2 cut(s)	466, 880
EaeI	YGGCCR	2 cut(s)	871, 1195
Eam1104I	CTCTTC	1 cut(s)	1984
EarI	CTCTTC	1 cut(s)	1984
Eco105I	TACGTA	1 cut(s)	1243
Eco130I	CCWWGG	3 cut(s)	843, 1098, 1139
Eco31I	GGTCTC	2 cut(s)	1160, 1580
Eco47I	GGWCC	1 cut(s)	594
Eco47III	AGCGCT	1 cut(s)	716
Eco88I	CYCGRG	2 cut(s)	1016, 1262
EcoNI	CCTNNNNNAGG	1 cut(s)	1019
EcoO109I	RGGNCCY	1 cut(s)	1521
EcoRI	GAATTC	1 cut(s)	1535
EcoRII	CCWGG	4 cut(s)	372, 1000, 1108, 2041
EcoT14I	CCWWGG	3 cut(s)	843, 1098, 1139
EcoT22I	ATGCAT	1 cut(s)	614
ErhI	CCWWGG	3 cut(s)	843, 1098, 1139
FalI	AAGNNNNNCTT	2 cut(s)	1979, 2011
FaqI	GGGAC	5 cut(s)	464, 523, 641, 1331, 1721
FblI	GTMKAC	2 cut(s)	1257, 1348
Fnu4HI	GCNGC	6 cut(s)	401, 710, 713, 1076, 1404, 1407
FokI	GGATG	5 cut(s)	222, 998, 1214, 1246, 1641
Fsp4HI	GCNGC	6 cut(s)	401, 710, 713, 1076, 1404, 1407
FspBI	CTAG	4 cut(s)	729, 984, 1079, 1545
GlaI	GCGC	1 cut(s)	716
GluI	GCNGC	6 cut(s)	401, 710, 713, 1076, 1404, 1407
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	3 cut(s)	91, 1023, 1184
HaeII	RGCGCY	1 cut(s)	718
HaeIII	GGCC	4 cut(s)	569, 873, 1197, 1523
HapII	CCGG	2 cut(s)	566, 1198
HgaI	GACGC	1 cut(s)	1631
HhaI	GCGC	1 cut(s)	717
Hin1I	GRCGYC	1 cut(s)	1206
Hin6I	GCGC	1 cut(s)	715
HinP1I	GCGC	1 cut(s)	715
HincII	GTYRAC	1 cut(s)	772
HindII	GTYRAC	1 cut(s)	772
HindIII	AAGCTT	4 cut(s)	287, 521, 1062, 1668
HinfI	GANTC	6 cut(s)	346, 602, 654, 1173, 1222, 1919
HpaII	CCGG	2 cut(s)	566, 1198
HphI	GGTGA	3 cut(s)	967, 1087, 1706
Hpy166II	GTNNAC	7 cut(s)	637, 667, 676, 772, 1246, 1258, 1349
Hpy188III	TCNNGA	9 cut(s)	179, 239, 350, 729, 907, 1210, 1643, 1799, 2008
Hpy8I	GTNNAC	7 cut(s)	637, 667, 676, 772, 1246, 1258, 1349
HpyAV	CCTTC	5 cut(s)	351, 488, 904, 1772, 1971
HpyCH4III	ACNGT	5 cut(s)	34, 392, 1188, 1480, 1832
HpyCH4IV	ACGT	4 cut(s)	231, 768, 1206, 1242
HpyF10VI	GCNNNNNNNGC	6 cut(s)	59, 466, 575, 865, 1377, 1631
HpyF3I	CTNAG	7 cut(s)	96, 718, 786, 860, 1026, 1049, 1728
HpySE526I	ACGT	4 cut(s)	231, 768, 1206, 1242
Hsp92I	GRCGYC	1 cut(s)	1206
HspAI	GCGC	1 cut(s)	715
Kzo9I	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
LmnI	GCTCC	2 cut(s)	141, 2013
Lsp1109I	GCAGC	6 cut(s)	387, 696, 724, 1062, 1390, 1418
LweI	GCATC	5 cut(s)	195, 1224, 1312, 1830, 1938
MaeI	CTAG	4 cut(s)	729, 984, 1079, 1545
MaeII	ACGT	4 cut(s)	231, 768, 1206, 1242
MaeIII	GTNAC	1 cut(s)	955
MalI	GATC	7 cut(s)	29, 183, 705, 1091, 1310, 1985, 2040
MboI	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
MboII	GAAGA	8 cut(s)	83, 1168, 1367, 1386, 1511, 1561, 1971, 2068
MfeI	CAATTG	1 cut(s)	1288
MhlI	GDGCHC	2 cut(s)	471, 903
MlsI	TGGCCA	1 cut(s)	873
MluCI	AATT	9 cut(s)	165, 747, 763, 795, 811, 1043, 1288, 1535, 1926
MluNI	TGGCCA	1 cut(s)	873
MlyI	GAGTC	3 cut(s)	596, 663, 1216
Mox20I	TGGCCA	1 cut(s)	873
Mph1103I	ATGCAT	1 cut(s)	614
MscI	TGGCCA	1 cut(s)	873
MseI	TTAA	6 cut(s)	218, 368, 429, 750, 762, 2052
MslI	CAYNNNNRTG	3 cut(s)	842, 1641, 1719
Msp20I	TGGCCA	1 cut(s)	873
MspA1I	CMGCKG	1 cut(s)	1760
MspCI	CTTAAG	1 cut(s)	428
MspI	CCGG	2 cut(s)	566, 1198
MspR9I	CCNGG	5 cut(s)	374, 1002, 1110, 1199, 2043
MssI	GTTTAAAC	1 cut(s)	369
MunI	CAATTG	1 cut(s)	1288
Mva1269I	GAATGC	2 cut(s)	307, 848
MvaI	CCWGG	4 cut(s)	374, 1002, 1110, 2043
MvnI	CGCG	1 cut(s)	2009
MwoI	GCNNNNNNNGC	6 cut(s)	59, 466, 575, 865, 1377, 1631
NciI	CCSGG	1 cut(s)	1199
NcoI	CCATGG	2 cut(s)	843, 1139
NdeII	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
NlaIV	GGNNCC	2 cut(s)	1522, 2047
NmuCI	GTSAC	1 cut(s)	955
NruI	TCGCGA	1 cut(s)	2009
NsiI	ATGCAT	1 cut(s)	614
NspI	RCATGY	3 cut(s)	316, 692, 1467
NspV	TTCGAA	1 cut(s)	684
PaeR7I	CTCGAG	2 cut(s)	1016, 1262
PagI	TCATGA	1 cut(s)	1642
PciI	ACATGT	1 cut(s)	688
PcsI	WCGNNNNNNNCGW	1 cut(s)	237
PctI	GAATGC	2 cut(s)	307, 848
PfeI	GAWTC	3 cut(s)	346, 1173, 1919
PflMI	CCANNNNNTGG	1 cut(s)	1805
PfoI	TCCNGGA	1 cut(s)	2041
PkrI	GCNGC	6 cut(s)	402, 711, 714, 1077, 1405, 1408
Ple19I	CGATCG	1 cut(s)	184
PleI	GAGTC	3 cut(s)	596, 662, 1216
PmeI	GTTTAAAC	1 cut(s)	369
PpsI	GAGTC	3 cut(s)	596, 662, 1216
Ppu21I	YACGTR	1 cut(s)	1243
PscI	ACATGT	1 cut(s)	688
PshBI	ATTAAT	1 cut(s)	762
Psp1406I	AACGTT	1 cut(s)	231
Psp6I	CCWGG	4 cut(s)	372, 1000, 1108, 2041
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	4 cut(s)	372, 1000, 1108, 2041
PspN4I	GGNNCC	2 cut(s)	1522, 2047
PspPI	GGNCC	2 cut(s)	594, 1521
PspXI	VCTCGAGB	2 cut(s)	1016, 1262
PsrI	GAACNNNNNNTAC	2 cut(s)	959, 991
PstI	CTGCAG	3 cut(s)	537, 714, 1408
PstNI	CAGNNNCTG	1 cut(s)	780
PvuI	CGATCG	1 cut(s)	184
RruI	TCGCGA	1 cut(s)	2009
RsaI	GTAC	7 cut(s)	381, 668, 822, 968, 1124, 1337, 1530
RsaNI	GTAC	7 cut(s)	380, 667, 821, 967, 1123, 1336, 1529
RseI	CAYNNNNRTG	3 cut(s)	842, 1641, 1719
SaqAI	TTAA	6 cut(s)	218, 368, 429, 750, 762, 2052
SatI	GCNGC	6 cut(s)	401, 710, 713, 1076, 1404, 1407
Sau3AI	GATC	7 cut(s)	27, 181, 703, 1089, 1308, 1983, 2038
Sau96I	GGNCC	2 cut(s)	594, 1521
SchI	GAGTC	3 cut(s)	596, 663, 1216
ScrFI	CCNGG	5 cut(s)	374, 1002, 1110, 1199, 2043
SduI	GDGCHC	2 cut(s)	471, 903
SfaNI	GCATC	5 cut(s)	195, 1224, 1312, 1830, 1938
SfcI	CTRYAG	3 cut(s)	533, 710, 1404
Sfr274I	CTCGAG	2 cut(s)	1016, 1262
SfuI	TTCGAA	1 cut(s)	684
SinI	GGWCC	1 cut(s)	594
SlaI	CTCGAG	2 cut(s)	1016, 1262
SmiMI	CAYNNNNRTG	3 cut(s)	842, 1641, 1719
SmlI	CTYRAG	3 cut(s)	428, 1016, 1262
SmoI	CTYRAG	3 cut(s)	428, 1016, 1262
SnaBI	TACGTA	1 cut(s)	1243
Sse9I	AATT	9 cut(s)	165, 747, 763, 795, 811, 1043, 1288, 1535, 1926
SsiI	CCGC	4 cut(s)	51, 592, 953, 1758
SspMI	CTAG	4 cut(s)	729, 984, 1079, 1545
StyD4I	CCNGG	5 cut(s)	372, 1000, 1108, 1197, 2041
StyI	CCWWGG	3 cut(s)	843, 1098, 1139
TaaI	ACNGT	5 cut(s)	34, 392, 1188, 1480, 1832
TaiI	ACGT	4 cut(s)	234, 771, 1209, 1245
TasI	AATT	9 cut(s)	165, 747, 763, 795, 811, 1043, 1288, 1535, 1926
TatI	WGTACW	2 cut(s)	966, 1528
TfiI	GAWTC	3 cut(s)	346, 1173, 1919
Tru1I	TTAA	6 cut(s)	218, 368, 429, 750, 762, 2052
Tru9I	TTAA	6 cut(s)	218, 368, 429, 750, 762, 2052
TscAI	CASTG	9 cut(s)	39, 178, 402, 580, 678, 844, 1134, 1305, 1837
TseFI	GTSAC	1 cut(s)	955
TseI	GCWGC	6 cut(s)	400, 709, 712, 1075, 1403, 1406
Tsp45I	GTSAC	1 cut(s)	955
TspDTI	ATGAA	7 cut(s)	224, 913, 1168, 1548, 1568, 1737, 1896
TspGWI	ACGGA	2 cut(s)	36, 1377
TspRI	CASTG	9 cut(s)	39, 178, 402, 580, 678, 844, 1134, 1305, 1837
Van91I	CCANNNNNTGG	1 cut(s)	1805
Vha464I	CTTAAG	1 cut(s)	428
VpaK11BI	GGWCC	1 cut(s)	594
VspI	ATTAAT	1 cut(s)	762
XagI	CCTNNNNNAGG	1 cut(s)	1019
XapI	RAATTY	6 cut(s)	165, 795, 811, 1043, 1535, 1926
XbaI	TCTAGA	1 cut(s)	728
XceI	RCATGY	3 cut(s)	316, 692, 1467
XcmI	CCANNNNNNNNNTGG	1 cut(s)	147
XhoI	CTCGAG	2 cut(s)	1016, 1262
XmiI	GTMKAC	2 cut(s)	1257, 1348
XspI	CTAG	4 cut(s)	729, 984, 1079, 1545
ZraI	GACGTC	1 cut(s)	1207
Zsp2I	ATGCAT	1 cut(s)	614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.