Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

56688180 .. 56693414

Gene Structure 5235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG333800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGTCTTCTCATTCCACCCACCACCTCTCTCTCTCTCTCCCACCTTCTCTTTCGCTCTCTTCATCTCCTTTCTCCAACCACAATCAACCTAAACATTTACCGGGTGGTCTTTGGTTGTTCGGGGTTAAAGACAAAAGGGTTCTTCCCTCAATCTGCAATGCGGTTTCCAAACCTCGCACCAAAGATTATGCAGATGTGTTGCAACCAGTGATAAAGTGGCGTAAGAATCATACGATCGCGGGGGATGACACACAACAAGATGAAGAGGCTCCTCCTACCAAGGACGACGACTCTGCAACAACCGAGATCATCAAGGAACATGTGGACTCCATCAAGTCCATGCTGTCTTCTATGGAGGATGGGGAGATCAGCGTATCAGCTTACGACACCGCCTGGGTTGCTTTGGTTGAAAATGTAAATGAAACTGATTCACCTCAATTCCCTTCCAGCCTCGAATGGATTGCCAACAACCAACTCGAAGATGGTTCTTGGGGCTACGAGGACATCTACTCCGCCCACGATCGGATCATCAGCACCCTCGCCTGCGTCGTCGCTTTGAAGTCGTGGAATCTCCACCCCGACAAATGCGACAAAGGAATGAAGTTTTTCAAGGAAAACCTAAACAAGCTGGAAGAAGAGAATATCGAACACATGCCTATAGGGTTCGAAGTTGCGTTTCCCTCTGTTCTGGAAATAGCTCGGAGCTTAAACCTTGAAGTGCCTGATGACTCTCCTGTGTTGCATAAGATCTATGCCTGCAGAAACTTAAAACTAACCAAGATACCCAAGGACATACTGCACAAAGTGGCCACAACGCTTCTTCATAGCGTGGAAGGGATGGCAGGTCTCGACTGGGAAAAGCTTCTGAAACTCCAGTCCCAAGACGGCTCGTTTTTGTTCTCTCCGGCGTCCACTGCCTACGCGGCTCAGCAGACCAAGGACGGAAAATGCATGTCGTATCTGTCCAGAGCAGTCCGCAAGTTCAATGGAGGAGTCCCTAATGTTTACCCAGTCGACTTGTTCGAACACATGTGGGCTGTGGATCGGTTGCAGAGGTTAGGATTGTGCAGATACTTCGAGCCGGAGATTAAGGAGTGTATGAAGTACGTCGCCAAGTACTGGACTGAGAAAGGGATTTGCTGGGCGAGAAACTCAGAGGTTCAAGACATCGATGACACAGCGATGGGGTTCAGACTGCTCCGGTTGCATGGGCACAAAGTGTCAGCTGATGTGTTTAAGCATTTTAAGAAAGGGGACGAGTTTTTCTGCTTTGCGGGACAATCGAACCAGGCTGTGACCGGAATGTACAACTTGTATAGGGCAAGTCAGGTGGCGTTACCGGGAGAGAAGATCCTCTATGAAGCCAAGGAGTTCTCGACAAAGTTCCTTAGGGAGAAGCAAGCTTCAAACGAGCTTCTAGACAAGTGGATCATAATGAAGGACTTGCCCGGAGAGGTGGGATATGCCCTTGATGTTCCATGGTATGCCAGCTTACCTCGACTAGAGACTAAATTCTATATCGAACAATATGGTGGTGAAGATGACGTATGGATTGGCAAGACTCTCTACAGTATGCCCTACGTTAACAATAATGTGTATCTTGAGCTGGCAAAGCTAGACTTCAACAATTGCCAAGCACTACATCTCAGTGAATGGGACAACCTTCAAAAGTGGTACGGAGAATGGAAAATTGGAGACTATGGACTAAGCAAAAAAAGTCTCCTCATGGCTTATTTTGTTGCCGCAGCAAGTATTTTTGAACCTGAAAGAGCAATTGAGCGACTCGCATGGGCTAAGACGGCCTGCTTAGTTGACACGATTGAGGCTTATTTTAAGAGAGAAACTTCTCGTGAAGATAAGAAGGCATTTGTTGATGAGTTCAAAGACCTTTCAAATATGCGAGAGTATGAAGTTGCAAGGAGGTCGAATAGGAACAGGACTGCCGGGCAAGGAATTGTTGGGGCTTTGTTGGCGACGCTAAGCCAACTCTCATTGGGCACAATGGTGCTACATGGCCAAGACATTACCCAATCTCTACGTCAATCTTGGGAGAAGTGGCTACTGAAGTGGCTAGAGATAGGGGGAAGGCACCAAGATGAAGCTGAGCTACTAGTAGAAACGATAAATCAAACCGCTGGCCTTTCACTAACTGATGGGTTGTTGTCCAATAAAGAACATGAGCAGCTTTTTAGCCTGACTAACAAAGTTTGCAATCAACTTCGTTTTTGCCAAAACCAAAAGCACGAGATGAACAATAATGGCAGCTGCGGAACAAAAATGAACATGACTGCCAAAGCAATAGAATCAGACATGCAGCAGCTTGTGGAATTGGTGCTAAAATCTTCGGATGGCATAGAATCCTTAATCAAGCAAAGCTTTTTCTTAGTAGCAAGGAGCTTTTATTATTCGACCTACTGTGACCCTAAAATTATTAGCCACCACATTGACAAAGTACTCTTCGAGAGAGCAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

824

Amino Acids

93.84

Weight (kDa)

5.84

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	284 - 490	1.7e-48	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	569 - 691	3.6e-06	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	833
AccB1I	GGYRCC	1 cut(s)	2088
AccB7I	CCANNNNNTGG	1 cut(s)	1119
AccI	GTMKAC	1 cut(s)	1014
AccII	CGCG	2 cut(s)	239, 923
AclWI	GGATC	4 cut(s)	533, 1050, 1345, 1436
AcoI	YGGCCR	2 cut(s)	807, 2014
AcsI	RAATTY	1 cut(s)	1511
AcuI	CTGAAG	1 cut(s)	2084
AcyI	GRCGYC	1 cut(s)	908
AdeI	CACNNNGTG	2 cut(s)	805, 1219
AfaI	GTAC	5 cut(s)	1106, 1118, 1307, 1676, 2454
AfiI	CCNNNNNNNGG	2 cut(s)	522, 1119
AflIII	ACRYGT	2 cut(s)	319, 1029
AhlI	ACTAGT	1 cut(s)	2110
AjnI	CCWGG	2 cut(s)	392, 1287
AjuI	GAANNNNNNNTTGG	2 cut(s)	1674, 1706
AleI	CACNNNNGTG	1 cut(s)	2003
Alw26I	GTCTC	4 cut(s)	851, 1499, 1689, 1724
AlwI	GGATC	4 cut(s)	533, 1050, 1345, 1436
AoxI	GGCC	4 cut(s)	807, 1800, 2014, 2137
ApeKI	GCWGC	6 cut(s)	1745, 2182, 2262, 2265, 2314, 2317
ApoI	RAATTY	1 cut(s)	1511
Asp700I	GAANNNNTTC	2 cut(s)	605, 861
AsuC2I	CCSGG	4 cut(s)	102, 1341, 1449, 1945
AsuHPI	GGTGA	2 cut(s)	423, 1547
AsuII	TTCGAA	2 cut(s)	666, 1023
AxyI	CCTNAGG	1 cut(s)	1388
BaeGI	GKGCMC	2 cut(s)	1215, 2000
BalI	TGGCCA	2 cut(s)	809, 2016
BanI	GGYRCC	1 cut(s)	2088
BarI	GAAGNNNNNNTAC	2 cut(s)	2091, 2123
BauI	CACGAG	2 cut(s)	1848, 2243
BbsI	GAAGAC	1 cut(s)	339
BbvI	GCAGC	6 cut(s)	1757, 2194, 2252, 2274, 2326, 2329
BccI	CCATC	7 cut(s)	338, 353, 476, 832, 1177, 2147, 2342
BceAI	ACGGC	2 cut(s)	901, 1815
BcgI	CGANNNNNNTGC	8 cut(s)	275, 309, 443, 477, 1057, 1091, 1905, 1939
BciT130I	CCWGG	2 cut(s)	394, 1289
BcnI	CCSGG	4 cut(s)	102, 1341, 1449, 1945
BcoDI	GTCTC	4 cut(s)	851, 1499, 1689, 1724
BcuI	ACTAGT	1 cut(s)	2110
BfaI	CTAG	5 cut(s)	1418, 1502, 1616, 2072, 2111
BfmI	CTRYAG	3 cut(s)	657, 757, 1567
BfuAI	ACCTGC	1 cut(s)	833
BglI	GCCNNNNNGGC	1 cut(s)	923
BglII	AGATCT	1 cut(s)	747
BisI	GCNGC	8 cut(s)	924, 1743, 1746, 2183, 2263, 2266, 2315, 2318
BlpI	GCTNAGC	3 cut(s)	927, 1979, 2103
BlsI	GCNGC	8 cut(s)	925, 1744, 1747, 2184, 2264, 2267, 2316, 2319
BmcAI	AGTACT	2 cut(s)	1118, 2454
Bme1390I	CCNGG	6 cut(s)	102, 394, 1289, 1341, 1449, 1945
BmiI	GGNNCC	2 cut(s)	270, 2090
BmrFI	CCNGG	6 cut(s)	102, 394, 1289, 1341, 1449, 1945
BmrI	ACTGGG	2 cut(s)	862, 1004
BmuI	ACTGGG	2 cut(s)	862, 1004
BpiI	GAAGAC	1 cut(s)	339
BpmI	CTGGAG	1 cut(s)	857
Bpu1102I	GCTNAGC	3 cut(s)	927, 1979, 2103
Bpu14I	TTCGAA	2 cut(s)	666, 1023
BpuEI	CTTGAG	1 cut(s)	1622
BpuMI	CCSGG	4 cut(s)	102, 1341, 1449, 1945
Bsa29I	ATCGAT	1 cut(s)	1170
BsaHI	GRCGYC	1 cut(s)	908
BsaI	GGTCTC	1 cut(s)	851
BsaJI	CCNNGG	6 cut(s)	279, 393, 786, 936, 1365, 1478
BsaWI	WCCGGW	2 cut(s)	1200, 1298
BsaXI	ACNNNNNCTCC	2 cut(s)	494, 524
Bsc4I	CCNNNNNNNGG	2 cut(s)	522, 1119
Bse1I	ACTGG	5 cut(s)	206, 857, 874, 1010, 1124
Bse21I	CCTNAGG	1 cut(s)	1388
Bse3DI	GCAATG	1 cut(s)	163
BseBI	CCWGG	2 cut(s)	394, 1289
BseCI	ATCGAT	1 cut(s)	1170
BseDI	CCNNGG	6 cut(s)	279, 393, 786, 936, 1365, 1478
BseGI	GGATG	4 cut(s)	250, 364, 843, 2353
BseLI	CCNNNNNNNGG	2 cut(s)	522, 1119
BseMI	GCAATG	1 cut(s)	163
BseMII	CTCAG	5 cut(s)	941, 1116, 1167, 1660, 2094
BseNI	ACTGG	5 cut(s)	206, 857, 874, 1010, 1124
BseRI	GAGGAG	3 cut(s)	261, 1005, 1712
BseSI	GKGCMC	2 cut(s)	1215, 2000
BseXI	GCAGC	6 cut(s)	1757, 2194, 2252, 2274, 2326, 2329
BseYI	CCCAGC	1 cut(s)	1140
BsgI	GTGCAG	2 cut(s)	782, 1087
Bsh1236I	CGCG	2 cut(s)	239, 923
Bsh1285I	CGRYCG	2 cut(s)	237, 523
BshFI	GGCC	4 cut(s)	809, 1802, 2016, 2139
BshNI	GGYRCC	1 cut(s)	2088
BshVI	ATCGAT	1 cut(s)	1170
BsiEI	CGRYCG	2 cut(s)	237, 523
BsiSI	CCGG	8 cut(s)	101, 905, 1082, 1201, 1299, 1340, 1449, 1944
BslFI	GGGAC	5 cut(s)	862, 980, 1268, 1290, 1670
BslI	CCNNNNNNNGG	2 cut(s)	522, 1119
BsmAI	GTCTC	4 cut(s)	851, 1499, 1689, 1724
BsmFI	GGGAC	5 cut(s)	862, 980, 1268, 1290, 1670
BsnI	GGCC	4 cut(s)	809, 1802, 2016, 2139
Bso31I	GGTCTC	1 cut(s)	851
Bsp119I	TTCGAA	2 cut(s)	666, 1023
Bsp1286I	GDGCHC	2 cut(s)	1215, 2000
Bsp1407I	TGTACA	1 cut(s)	1305
Bsp143I	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
Bsp1720I	GCTNAGC	3 cut(s)	927, 1979, 2103
Bsp19I	CCATGG	1 cut(s)	1478
BspANI	GGCC	4 cut(s)	809, 1802, 2016, 2139
BspCNI	CTCAG	5 cut(s)	940, 1117, 1166, 1659, 2095
BspDI	ATCGAT	1 cut(s)	1170
BspFNI	CGCG	2 cut(s)	239, 923
BspLI	GGNNCC	2 cut(s)	270, 2090
BspMAI	CTGCAG	1 cut(s)	761
BspMI	ACCTGC	1 cut(s)	833
BspPI	GGATC	4 cut(s)	533, 1050, 1345, 1436
BspT104I	TTCGAA	2 cut(s)	666, 1023
BspT107I	GGYRCC	1 cut(s)	2088
BspTNI	GGTCTC	1 cut(s)	851
BsrDI	GCAATG	1 cut(s)	163
BsrGI	TGTACA	1 cut(s)	1305
BsrI	ACTGG	5 cut(s)	206, 857, 874, 1010, 1124
BssECI	CCNNGG	6 cut(s)	279, 393, 786, 936, 1365, 1478
BssMI	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
BssNI	GRCGYC	1 cut(s)	908
BssSI	CACGAG	2 cut(s)	1848, 2243
BssT1I	CCWWGG	5 cut(s)	279, 786, 936, 1365, 1478
Bst2BI	CACGAG	2 cut(s)	1848, 2243
Bst2UI	CCWGG	2 cut(s)	394, 1289
Bst4CI	ACNGT	2 cut(s)	1571, 2417
Bst6I	CTCTTC	4 cut(s)	64, 258, 630, 2462
BstACI	GRCGYC	1 cut(s)	908
BstAUI	TGTACA	1 cut(s)	1305
BstBI	TTCGAA	2 cut(s)	666, 1023
BstC8I	GCNNGC	7 cut(s)	544, 757, 1401, 1489, 1608, 1804, 2137
BstDSI	CCRYGG	1 cut(s)	1478
BstF5I	GGATG	4 cut(s)	250, 364, 843, 2353
BstFNI	CGCG	2 cut(s)	239, 923
BstKTI	GATC	9 cut(s)	237, 309, 369, 523, 528, 750, 1045, 1353, 1431
BstMAI	GTCTC	4 cut(s)	851, 1499, 1689, 1724
BstMBI	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
BstMCI	CGRYCG	2 cut(s)	237, 523
BstMWI	GCNNNNNNNGC	7 cut(s)	398, 914, 923, 1204, 1612, 1799, 1970
BstNI	CCWGG	2 cut(s)	394, 1289
BstNSI	RCATGY	5 cut(s)	323, 655, 955, 1033, 2314
BstSCI	CCNGG	6 cut(s)	100, 392, 1287, 1339, 1447, 1943
BstSFI	CTRYAG	3 cut(s)	657, 757, 1567
BstSLI	GKGCMC	2 cut(s)	1215, 2000
BstUI	CGCG	2 cut(s)	239, 923
BstV1I	GCAGC	6 cut(s)	1757, 2194, 2252, 2274, 2326, 2329
BstV2I	GAAGAC	1 cut(s)	339
BstX2I	RGATCY	2 cut(s)	747, 1350
BstYI	RGATCY	2 cut(s)	747, 1350
Bsu15I	ATCGAT	1 cut(s)	1170
Bsu36I	CCTNAGG	1 cut(s)	1388
BsuRI	GGCC	4 cut(s)	809, 1802, 2016, 2139
BsuTUI	ATCGAT	1 cut(s)	1170
BtgI	CCRYGG	1 cut(s)	1478
BtgZI	GCGATG	1 cut(s)	1196
BtsCI	GGATG	4 cut(s)	250, 364, 843, 2353
BtsI	GCAGTG	1 cut(s)	912
BtsIMutI	CAGTG	3 cut(s)	213, 912, 1654
BveI	ACCTGC	1 cut(s)	833
Cac8I	GCNNGC	7 cut(s)	544, 757, 1401, 1489, 1608, 1804, 2137
ClaI	ATCGAT	1 cut(s)	1170
CseI	GACGC	3 cut(s)	535, 897, 1984
Csp6I	GTAC	5 cut(s)	1105, 1117, 1306, 1675, 2453
CspCI	CAANNNNNGTGG	2 cut(s)	1311, 1346
CviQI	GTAC	5 cut(s)	1105, 1117, 1306, 1675, 2453
DpnI	GATC	9 cut(s)	236, 308, 368, 522, 527, 749, 1044, 1352, 1430
DpnII	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
DraIII	CACNNNGTG	2 cut(s)	805, 1219
EaeI	YGGCCR	2 cut(s)	807, 2014
Eam1104I	CTCTTC	4 cut(s)	64, 258, 630, 2462
EarI	CTCTTC	4 cut(s)	64, 258, 630, 2462
EciI	GGCGGA	1 cut(s)	502
Eco130I	CCWWGG	5 cut(s)	279, 786, 936, 1365, 1478
Eco31I	GGTCTC	1 cut(s)	851
Eco57I	CTGAAG	1 cut(s)	2084
Eco81I	CCTNAGG	1 cut(s)	1388
EcoRII	CCWGG	2 cut(s)	392, 1287
EcoT14I	CCWWGG	5 cut(s)	279, 786, 936, 1365, 1478
EcoT22I	ATGCAT	1 cut(s)	953
ErhI	CCWWGG	5 cut(s)	279, 786, 936, 1365, 1478
FalI	AAGNNNNNCTT	4 cut(s)	1604, 1636, 2360, 2392
FaqI	GGGAC	5 cut(s)	862, 980, 1268, 1290, 1670
FauI	CCCGC	2 cut(s)	232, 1267
FblI	GTMKAC	1 cut(s)	1014
Fnu4HI	GCNGC	8 cut(s)	924, 1743, 1746, 2183, 2263, 2266, 2315, 2318
FokI	GGATG	4 cut(s)	257, 371, 850, 2360
Fsp4HI	GCNGC	8 cut(s)	924, 1743, 1746, 2183, 2263, 2266, 2315, 2318
FspBI	CTAG	5 cut(s)	1418, 1502, 1616, 2072, 2111
GluI	GCNGC	8 cut(s)	924, 1743, 1746, 2183, 2263, 2266, 2315, 2318
GsaI	CCCAGC	1 cut(s)	1144
GsuI	CTGGAG	1 cut(s)	857
HaeIII	GGCC	4 cut(s)	809, 1802, 2016, 2139
HapII	CCGG	8 cut(s)	101, 905, 1082, 1201, 1299, 1340, 1449, 1944
HgaI	GACGC	3 cut(s)	535, 897, 1984
Hin1I	GRCGYC	1 cut(s)	908
HincII	GTYRAC	3 cut(s)	1015, 1585, 1813
HindII	GTYRAC	3 cut(s)	1015, 1585, 1813
HindIII	AAGCTT	3 cut(s)	860, 1401, 2374
HpaI	GTTAAC	1 cut(s)	1585
HpaII	CCGG	8 cut(s)	101, 905, 1082, 1201, 1299, 1340, 1449, 1944
HphI	GGTGA	2 cut(s)	423, 1547
Hpy166II	GTNNAC	6 cut(s)	325, 912, 1006, 1015, 1585, 1813
Hpy188I	TCNGA	7 cut(s)	525, 702, 867, 1156, 1193, 2308, 2347
Hpy188III	TCNNGA	9 cut(s)	689, 848, 966, 1163, 1375, 1418, 1601, 1850, 2461
Hpy8I	GTNNAC	6 cut(s)	325, 912, 1006, 1015, 1585, 1813
Hpy99I	CGWCG	5 cut(s)	290, 551, 554, 1112, 1978
HpyAV	CCTTC	7 cut(s)	54, 453, 827, 1432, 1673, 1855, 2079
HpyCH4III	ACNGT	2 cut(s)	1571, 2417
HpyCH4IV	ACGT	4 cut(s)	1107, 1545, 1581, 2038
HpyF10VI	GCNNNNNNNGC	7 cut(s)	398, 914, 923, 1204, 1612, 1799, 1970
HpySE526I	ACGT	4 cut(s)	1107, 1545, 1581, 2038
Hsp92I	GRCGYC	1 cut(s)	908
KspAI	GTTAAC	1 cut(s)	1585
Kzo9I	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
LmnI	GCTCC	4 cut(s)	274, 702, 1203, 2394
Lsp1109I	GCAGC	6 cut(s)	1757, 2194, 2252, 2274, 2326, 2329
MaeI	CTAG	5 cut(s)	1418, 1502, 1616, 2072, 2111
MaeII	ACGT	4 cut(s)	1107, 1545, 1581, 2038
MaeIII	GTNAC	3 cut(s)	1294, 1335, 2417
MalI	GATC	9 cut(s)	236, 308, 368, 522, 527, 749, 1044, 1352, 1430
MboI	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
MfeI	CAATTG	2 cut(s)	1627, 1773
MflI	RGATCY	2 cut(s)	747, 1350
MhlI	GDGCHC	2 cut(s)	1215, 2000
MlsI	TGGCCA	2 cut(s)	809, 2016
MluCI	AATT	9 cut(s)	437, 1511, 1627, 1689, 1773, 1953, 2327, 2427, 2469
MluNI	TGGCCA	2 cut(s)	809, 2016
MlyI	GAGTC	6 cut(s)	284, 320, 722, 1002, 1555, 1776
MmeI	TCCRAC	1 cut(s)	99
Mox20I	TGGCCA	2 cut(s)	809, 2016
Mph1103I	ATGCAT	1 cut(s)	953
MroXI	GAANNNNTTC	2 cut(s)	605, 861
MscI	TGGCCA	2 cut(s)	809, 2016
MseI	TTAA	9 cut(s)	126, 707, 767, 1089, 1236, 1245, 1584, 1833, 2363
MslI	CAYNNNNRTG	4 cut(s)	1181, 1647, 2003, 2094
Msp20I	TGGCCA	2 cut(s)	809, 2016
MspA1I	CMGCKG	3 cut(s)	1226, 2135, 2265
MspI	CCGG	8 cut(s)	101, 905, 1082, 1201, 1299, 1340, 1449, 1944
MspR9I	CCNGG	6 cut(s)	102, 394, 1289, 1341, 1449, 1945
MunI	CAATTG	2 cut(s)	1627, 1773
MvaI	CCWGG	2 cut(s)	394, 1289
MvnI	CGCG	2 cut(s)	239, 923
MwoI	GCNNNNNNNGC	7 cut(s)	398, 914, 923, 1204, 1612, 1799, 1970
NciI	CCSGG	4 cut(s)	102, 1341, 1449, 1945
NcoI	CCATGG	1 cut(s)	1478
NdeII	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
NlaIV	GGNNCC	2 cut(s)	270, 2090
NmuCI	GTSAC	2 cut(s)	1294, 2417
NsiI	ATGCAT	1 cut(s)	953
NspI	RCATGY	5 cut(s)	323, 655, 955, 1033, 2314
NspV	TTCGAA	2 cut(s)	666, 1023
OliI	CACNNNNGTG	1 cut(s)	2003
PciI	ACATGT	2 cut(s)	319, 1029
PcsI	WCGNNNNNNNCGW	2 cut(s)	546, 1020
PdmI	GAANNNNTTC	2 cut(s)	605, 861
PfeI	GAWTC	5 cut(s)	226, 428, 568, 2303, 2357
PflMI	CCANNNNNTGG	1 cut(s)	1119
PkrI	GCNGC	8 cut(s)	925, 1744, 1747, 2184, 2264, 2267, 2316, 2319
Ple19I	CGATCG	2 cut(s)	237, 523
PleI	GAGTC	6 cut(s)	284, 320, 722, 1001, 1555, 1776
PpsI	GAGTC	6 cut(s)	284, 320, 722, 1001, 1555, 1776
PscI	ACATGT	2 cut(s)	319, 1029
Psp6I	CCWGG	2 cut(s)	392, 1287
PspFI	CCCAGC	1 cut(s)	1140
PspGI	CCWGG	2 cut(s)	392, 1287
PspN4I	GGNNCC	2 cut(s)	270, 2090
PstI	CTGCAG	1 cut(s)	761
PsuI	RGATCY	2 cut(s)	747, 1350
PvuI	CGATCG	2 cut(s)	237, 523
PvuII	CAGCTG	2 cut(s)	1226, 2265
RsaI	GTAC	5 cut(s)	1106, 1118, 1307, 1676, 2454
RsaNI	GTAC	5 cut(s)	1105, 1117, 1306, 1675, 2453
RseI	CAYNNNNRTG	4 cut(s)	1181, 1647, 2003, 2094
SalI	GTCGAC	1 cut(s)	1013
SaqAI	TTAA	9 cut(s)	126, 707, 767, 1089, 1236, 1245, 1584, 1833, 2363
SatI	GCNGC	8 cut(s)	924, 1743, 1746, 2183, 2263, 2266, 2315, 2318
Sau3AI	GATC	9 cut(s)	234, 306, 366, 520, 525, 747, 1042, 1350, 1428
ScaI	AGTACT	2 cut(s)	1118, 2454
SchI	GAGTC	6 cut(s)	284, 320, 722, 1002, 1555, 1776
ScrFI	CCNGG	6 cut(s)	102, 394, 1289, 1341, 1449, 1945
SduI	GDGCHC	2 cut(s)	1215, 2000
SfcI	CTRYAG	3 cut(s)	657, 757, 1567
SfuI	TTCGAA	2 cut(s)	666, 1023
SmiMI	CAYNNNNRTG	4 cut(s)	1181, 1647, 2003, 2094
SmlI	CTYRAG	1 cut(s)	1601
SmoI	CTYRAG	1 cut(s)	1601
SpeI	ACTAGT	1 cut(s)	2110
Sse9I	AATT	9 cut(s)	437, 1511, 1627, 1689, 1773, 1953, 2327, 2427, 2469
SspMI	CTAG	5 cut(s)	1418, 1502, 1616, 2072, 2111
StyD4I	CCNGG	6 cut(s)	100, 392, 1287, 1339, 1447, 1943
StyI	CCWWGG	5 cut(s)	279, 786, 936, 1365, 1478
TaaI	ACNGT	2 cut(s)	1571, 2417
TaiI	ACGT	4 cut(s)	1110, 1548, 1584, 2041
TasI	AATT	9 cut(s)	437, 1511, 1627, 1689, 1773, 1953, 2327, 2427, 2469
TatI	WGTACW	3 cut(s)	1116, 1305, 2452
TauI	GCSGC	2 cut(s)	926, 1745
TfiI	GAWTC	5 cut(s)	226, 428, 568, 2303, 2357
Tru1I	TTAA	9 cut(s)	126, 707, 767, 1089, 1236, 1245, 1584, 1833, 2363
Tru9I	TTAA	9 cut(s)	126, 707, 767, 1089, 1236, 1245, 1584, 1833, 2363
TscAI	CASTG	3 cut(s)	213, 919, 1654
TseFI	GTSAC	2 cut(s)	1294, 2417
TseI	GCWGC	6 cut(s)	1745, 2182, 2262, 2265, 2314, 2317
Tsp45I	GTSAC	2 cut(s)	1294, 2417
TspGWI	ACGGA	2 cut(s)	957, 1692
TspRI	CASTG	3 cut(s)	213, 919, 1654
Van91I	CCANNNNNTGG	1 cut(s)	1119
XapI	RAATTY	1 cut(s)	1511
XbaI	TCTAGA	1 cut(s)	1417
XceI	RCATGY	5 cut(s)	323, 655, 955, 1033, 2314
XcmI	CCANNNNNNNNNTGG	2 cut(s)	213, 479
XmiI	GTMKAC	1 cut(s)	1014
XmnI	GAANNNNTTC	2 cut(s)	605, 861
XspI	CTAG	5 cut(s)	1418, 1502, 1616, 2072, 2111
ZrmI	AGTACT	2 cut(s)	1118, 2454
Zsp2I	ATGCAT	1 cut(s)	953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.