Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

56591329 .. 56595777

Gene Structure 4449 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG333600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGCCTTCTTCCGCTCACCACCTCGTTCTCTCTGTCCTAAATTCTCTACCATCACCGTCCGCCTCTTCTTTCTTCACCCACAATCAACCTAGACATTTACATGCAGGTTTTTGGTTTTTCGGGGATGAAGACAAAAGGGTTCTTCCCTTAATATGCAGTGCGGTTTCTAAACCTCGCACTCGAGATTATGCACCCTTGTTGCATAAGATTGTGAAAGATGATACACAACAAAATGAAGAAACTCCTCCTACCAATAAGGATGACAACTCTGCATCGACCCAGATCATCAAGGAACTTGTGGACTCCGTCAAGTCCATGCTGTCTTCTATGGAGGATGGGGAGATCAGCATATCAGCGTACGATACAGCATGGGTTGCCTTGGTCGAAGACGTCAATGGAACTTGTTCGCCTCATTTCCCTTCCAGCCTCGAATGGATTGCCAACAACCAGCTTGAAGATGGCTCTTGGGGCTACAAGGACGTCTTCTCTGCCCACGATGGAATCATCAGCACCCTAGCCTGTGTTGTTGCGTTGAAATCGTGGAGTCTCCACCCAGACAAATGCGACAAAGGAATGAGGTTTTTCAGGGAAAACCTAGACAAAATTGAAGACGAGAATAGTGAGCACATGCCTATAGGGTTTGAAGTTACATTCCCTTCTGTCCTGGAAATAGCTCGGAGCTTAAACCTTGAAGTTCCTGATGAGTCTCCTGTGTTGCATGAGATCTATGCCTGCAGAAACCTGAAACTCTCAAAGATACCGAGGGACATACTGCACAATGTGGCCACATCACTGCTTTATAGCCTTGAAGGAATGGCAGGTCTCGACTGGGAAAAGCTTCTGAAACTCCAGTCCAGAGACGGGTCGTTTCTCTTTTCTCCGGCGTCTACTGCCTACGCATTGCAGCAGACAAAGGATCGAAACTGCATGTCGTATCTGTCAAGAATAGTCCACAAGTTCAATGGAGGAGTCCCTGGTGTGTATCCAGTCGACTTGTTCGAACGCATGTGGGCTGTCGATCGCTTGCAGAGGTTAGGACTGTCCAGATACTTCGAGCCGGAGATTAAGGAGTGTGTTAGATACGTATCGAGGTATTGGACGGAGAAAGGAATTTCGTGGGTGAGAAACTCAGAGGTTCCAGACATCGATGACACATCAATGGGGTTCAGACTGCTCCGGCTGCATGGGCATAAGGTGTCGGCTGAGGTTTATGAGTATTTTAAGAAAGGAAGTGAGTTCTTCTGCTATCCTGGACAGTCGAGCCAAGCTGTGACCGGAATATACAACTTATATAGGGCAAGTCAGTTGGCATTACCGGAAGAGAAGATCCTTGGGGATGCTAAAGAGTTTGCTACTAAATTCCTTAGAGAGAAACAAGCTTCTAATGAGCTTTTGGACAAATGGATGATAATTAAGGACTTACCTGGAGAGGTGGGTTACGCGCTGGATTTTCCATGGTATGCGAGCTTACCTCGACTGGAGACTATATTTTACATTGAACAATATGGTGGTGAAGATGATGTTTGGATTGGCAAGACTCTCTACAGCATGCCCTACATTAGCAATAATGTGTATCTGGAGCTGGCAAAGCTAGACTACAACAATTGCCAAGCATTACATCTCAAGGAATGGGACAGCATTCAAAAGTGGTACAAAGAATGGAAACTCGAAAACTATGGACTGAGTGAAAAGAGTCTCCTCACGGCTTATTTTGTTGCGGCAGCGAGCATTTTCGAACCCGAAAGAGCTAATGAGCGACTTGCATGGGCTAAAACGGTATGCCTAGTTGATATAATTGTGTCTTATTTTAATGGAGAAACTTACGATGAAGATAAGAAGGCTTTCATTGATGAATTCAAAACCTTTTCCAATATGCGAGACTATGAGAATGCAAGGAGGTCCTCCACAAACAAGACTGCAGGGCAAGGAATTGTTGGGGCTTTGCTGGCAACCCTAAGCCAACTCTCATCGGTTACAATGGCGCTACATCACCAAGACATTACCGAATCTCTAAGTCAAGCTTGGGAAAAGTGGCTACTGAAGTGGCAAGAGAAAGGGGAGAGGTACGAGATGAAGCTGAGCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

695

Amino Acids

79.58

Weight (kDa)

5.38

Isoelectric Point (pI)

37.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	276 - 482	1.6e-42	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	552 - 680	2.4e-07	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	393, 483
Acc36I	ACCTGC	2 cut(s)	95, 809
AccBSI	CCGCTC	1 cut(s)	14
AccI	GTMKAC	2 cut(s)	887, 990
AccII	CGCG	1 cut(s)	1442
AciI	CCGC	4 cut(s)	12, 60, 161, 1718
AclWI	GGATC	2 cut(s)	924, 1321
AcoI	YGGCCR	1 cut(s)	783
AcsI	RAATTY	4 cut(s)	40, 1110, 1358, 1853
AcuI	CTGAAG	1 cut(s)	2060
AcyI	GRCGYC	3 cut(s)	390, 480, 884
AdeI	CACNNNGTG	1 cut(s)	781
AfaI	GTAC	3 cut(s)	359, 1652, 2066
AfiI	CCNNNNNNNGG	1 cut(s)	861
AjnI	CCWGG	4 cut(s)	663, 973, 1249, 1423
Alw21I	GWGCWC	1 cut(s)	627
Alw26I	GTCTC	7 cut(s)	551, 711, 827, 852, 1475, 1700, 1872
AlwI	GGATC	2 cut(s)	924, 1321
Ama87I	CYCGRG	1 cut(s)	180
AoxI	GGCC	1 cut(s)	783
ApeKI	GCWGC	3 cut(s)	904, 1180, 1721
ApoI	RAATTY	4 cut(s)	40, 1110, 1358, 1853
Asp700I	GAANNNNTTC	3 cut(s)	403, 837, 1841
AspLEI	GCGC	2 cut(s)	1444, 1984
AspS9I	GGNCC	1 cut(s)	1899
AsuHPI	GGTGA	6 cut(s)	8, 45, 67, 1132, 1523, 1982
AsuII	TTCGAA	2 cut(s)	999, 1734
AvaI	CYCGRG	1 cut(s)	180
AvaII	GGWCC	1 cut(s)	1899
BalI	TGGCCA	1 cut(s)	785
BarI	GAAGNNNNNNTAC	1 cut(s)	2066
BbsI	GAAGAC	5 cut(s)	135, 315, 393, 475, 615
Bbv12I	GWGCWC	1 cut(s)	627
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	3 cut(s)	916, 1167, 1733
BccI	CCATC	4 cut(s)	58, 329, 452, 491
BceAI	ACGGC	1 cut(s)	1719
BcgI	CGANNNNNNTGC	2 cut(s)	419, 453
BciT130I	CCWGG	4 cut(s)	665, 975, 1251, 1425
BciVI	GTATCC	1 cut(s)	993
BcoDI	GTCTC	7 cut(s)	551, 711, 827, 852, 1475, 1700, 1872
BfaI	CTAG	6 cut(s)	90, 515, 596, 1592, 1784, 2086
BfmI	CTRYAG	4 cut(s)	633, 733, 1543, 1917
BfoI	RGCGCY	1 cut(s)	1985
BfuAI	ACCTGC	2 cut(s)	95, 809
BfuI	GTATCC	1 cut(s)	993
BglII	AGATCT	1 cut(s)	723
BisI	GCNGC	4 cut(s)	905, 1181, 1719, 1722
BlpI	GCTNAGC	1 cut(s)	2078
BlsI	GCNGC	4 cut(s)	906, 1182, 1720, 1723
Bme1390I	CCNGG	4 cut(s)	665, 975, 1251, 1425
Bme18I	GGWCC	1 cut(s)	1899
BmeT110I	CYCGRG	1 cut(s)	180
BmgT120I	GGNCC	1 cut(s)	1899
BmiI	GGNNCC	1 cut(s)	1137
BmrFI	CCNGG	4 cut(s)	665, 975, 1251, 1425
BmrI	ACTGGG	1 cut(s)	838
BmsI	GCATC	2 cut(s)	281, 1327
BmuI	ACTGGG	1 cut(s)	838
BpiI	GAAGAC	5 cut(s)	135, 315, 393, 475, 615
BplI	GAGNNNNNCTC	2 cut(s)	1456, 1488
BpmI	CTGGAG	4 cut(s)	833, 1446, 1499, 1598
Bpu10I	CCTNAGC	2 cut(s)	1203, 1955
Bpu1102I	GCTNAGC	1 cut(s)	2078
Bpu14I	TTCGAA	2 cut(s)	999, 1734
BpuEI	CTTGAG	1 cut(s)	1607
Bsa29I	ATCGAT	1 cut(s)	1146
BsaAI	YACGTR	1 cut(s)	1084
BsaBI	GATNNNNATC	1 cut(s)	1084
BsaHI	GRCGYC	3 cut(s)	390, 480, 884
BsaI	GGTCTC	1 cut(s)	827
BsaJI	CCNNGG	5 cut(s)	378, 761, 973, 1330, 1454
BsaWI	WCCGGW	2 cut(s)	1274, 1315
Bsc4I	CCNNNNNNNGG	1 cut(s)	861
Bse1I	ACTGG	4 cut(s)	833, 850, 986, 1482
Bse3DI	GCAATG	1 cut(s)	899
Bse8I	GATNNNNATC	1 cut(s)	1084
BseBI	CCWGG	4 cut(s)	665, 975, 1251, 1425
BseCI	ATCGAT	1 cut(s)	1146
BseDI	CCNNGG	5 cut(s)	378, 761, 973, 1330, 1454
BseGI	GGATG	5 cut(s)	130, 265, 340, 1342, 1410
BseJI	GATNNNNATC	1 cut(s)	1084
BseLI	CCNNNNNNNGG	1 cut(s)	861
BseMI	GCAATG	1 cut(s)	899
BseMII	CTCAG	4 cut(s)	1143, 1194, 1673, 2069
BseNI	ACTGG	4 cut(s)	833, 850, 986, 1482
BseRI	GAGGAG	3 cut(s)	234, 981, 1688
BseXI	GCAGC	3 cut(s)	916, 1167, 1733
BsgI	GTGCAG	1 cut(s)	758
Bsh1236I	CGCG	1 cut(s)	1442
Bsh1285I	CGRYCG	1 cut(s)	1021
BshFI	GGCC	1 cut(s)	785
BshVI	ATCGAT	1 cut(s)	1146
BsiEI	CGRYCG	1 cut(s)	1021
BsiHKAI	GWGCWC	1 cut(s)	627
BsiHKCI	CYCGRG	1 cut(s)	180
BsiSI	CCGG	5 cut(s)	881, 1058, 1177, 1275, 1316
BsiWI	CGTACG	1 cut(s)	357
BslFI	GGGAC	3 cut(s)	779, 956, 1646
BslI	CCNNNNNNNGG	1 cut(s)	861
BsmAI	GTCTC	7 cut(s)	551, 711, 827, 852, 1475, 1700, 1872
BsmBI	CGTCTC	1 cut(s)	852
BsmFI	GGGAC	3 cut(s)	779, 956, 1646
BsmI	GAATGC	2 cut(s)	1638, 1894
BsnI	GGCC	1 cut(s)	785
Bso31I	GGTCTC	1 cut(s)	827
BsoBI	CYCGRG	1 cut(s)	180
Bsp119I	TTCGAA	2 cut(s)	999, 1734
Bsp1286I	GDGCHC	1 cut(s)	627
Bsp143I	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
Bsp1720I	GCTNAGC	1 cut(s)	2078
Bsp19I	CCATGG	1 cut(s)	1454
BspACI	CCGC	4 cut(s)	12, 60, 161, 1718
BspANI	GGCC	1 cut(s)	785
BspCNI	CTCAG	4 cut(s)	1142, 1195, 1674, 2070
BspDI	ATCGAT	1 cut(s)	1146
BspFNI	CGCG	1 cut(s)	1442
BspLI	GGNNCC	1 cut(s)	1137
BspMAI	CTGCAG	2 cut(s)	737, 1921
BspMI	ACCTGC	2 cut(s)	95, 809
BspPI	GGATC	2 cut(s)	924, 1321
BspT104I	TTCGAA	2 cut(s)	999, 1734
BspTNI	GGTCTC	1 cut(s)	827
BsrBI	CCGCTC	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	899
BsrI	ACTGG	4 cut(s)	833, 850, 986, 1482
BssECI	CCNNGG	5 cut(s)	378, 761, 973, 1330, 1454
BssMI	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
BssNI	GRCGYC	3 cut(s)	390, 480, 884
BssT1I	CCWWGG	3 cut(s)	378, 1330, 1454
Bst2UI	CCWGG	4 cut(s)	665, 975, 1251, 1425
Bst4CI	ACNGT	4 cut(s)	57, 1041, 1257, 1777
Bst6I	CTCTTC	2 cut(s)	70, 1314
BstACI	GRCGYC	3 cut(s)	390, 480, 884
BstAPI	GCANNNNNTGC	1 cut(s)	374
BstBAI	YACGTR	1 cut(s)	1084
BstBI	TTCGAA	2 cut(s)	999, 1734
BstC8I	GCNNGC	7 cut(s)	733, 1025, 1465, 1550, 1584, 1726, 1947
BstDEI	CTNAG	7 cut(s)	1129, 1203, 1364, 1682, 1955, 2012, 2078
BstDSI	CCRYGG	1 cut(s)	1454
BstF5I	GGATG	5 cut(s)	130, 265, 340, 1342, 1410
BstFNI	CGCG	1 cut(s)	1442
BstH2I	RGCGCY	1 cut(s)	1985
BstHHI	GCGC	2 cut(s)	1444, 1984
BstKTI	GATC	6 cut(s)	285, 345, 726, 919, 1021, 1329
BstMAI	GTCTC	7 cut(s)	551, 711, 827, 852, 1475, 1700, 1872
BstMBI	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
BstMCI	CGRYCG	1 cut(s)	1021
BstMWI	GCNNNNNNNGC	7 cut(s)	374, 468, 890, 1180, 1186, 1588, 1946
BstNI	CCWGG	4 cut(s)	665, 975, 1251, 1425
BstNSI	RCATGY	5 cut(s)	104, 631, 931, 1009, 1552
BstSCI	CCNGG	4 cut(s)	663, 973, 1249, 1423
BstSFI	CTRYAG	4 cut(s)	633, 733, 1543, 1917
BstSNI	TACGTA	1 cut(s)	1084
BstUI	CGCG	1 cut(s)	1442
BstV1I	GCAGC	3 cut(s)	916, 1167, 1733
BstV2I	GAAGAC	5 cut(s)	135, 315, 393, 475, 615
BstX2I	RGATCY	2 cut(s)	723, 1326
BstYI	RGATCY	2 cut(s)	723, 1326
Bsu15I	ATCGAT	1 cut(s)	1146
BsuI	GTATCC	1 cut(s)	993
BsuRI	GGCC	1 cut(s)	785
BsuTUI	ATCGAT	1 cut(s)	1146
BtgI	CCRYGG	1 cut(s)	1454
BtsCI	GGATG	5 cut(s)	130, 265, 340, 1342, 1410
BtsI	GCAGTG	2 cut(s)	163, 791
BtsIMutI	CAGTG	2 cut(s)	163, 791
BveI	ACCTGC	2 cut(s)	95, 809
Cac8I	GCNNGC	7 cut(s)	733, 1025, 1465, 1550, 1584, 1726, 1947
CfoI	GCGC	2 cut(s)	1444, 1984
Cfr13I	GGNCC	1 cut(s)	1899
ClaI	ATCGAT	1 cut(s)	1146
CseI	GACGC	1 cut(s)	873
Csp6I	GTAC	3 cut(s)	358, 1651, 2065
CviQI	GTAC	3 cut(s)	358, 1651, 2065
DdeI	CTNAG	7 cut(s)	1129, 1203, 1364, 1682, 1955, 2012, 2078
DpnI	GATC	6 cut(s)	284, 344, 725, 918, 1020, 1328
DpnII	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
DraIII	CACNNNGTG	1 cut(s)	781
EaeI	YGGCCR	1 cut(s)	783
Eam1104I	CTCTTC	2 cut(s)	70, 1314
EarI	CTCTTC	2 cut(s)	70, 1314
EciI	GGCGGA	1 cut(s)	49
Eco105I	TACGTA	1 cut(s)	1084
Eco130I	CCWWGG	3 cut(s)	378, 1330, 1454
Eco31I	GGTCTC	1 cut(s)	827
Eco47I	GGWCC	1 cut(s)	1899
Eco57I	CTGAAG	1 cut(s)	2060
Eco88I	CYCGRG	1 cut(s)	180
EcoO109I	RGGNCCY	1 cut(s)	1899
EcoRI	GAATTC	1 cut(s)	1853
EcoRII	CCWGG	4 cut(s)	663, 973, 1249, 1423
EcoT14I	CCWWGG	3 cut(s)	378, 1330, 1454
ErhI	CCWWGG	3 cut(s)	378, 1330, 1454
Esp3I	CGTCTC	1 cut(s)	852
FalI	AAGNNNNNCTT	4 cut(s)	467, 499, 2005, 2037
FaqI	GGGAC	3 cut(s)	779, 956, 1646
FblI	GTMKAC	2 cut(s)	887, 990
Fnu4HI	GCNGC	4 cut(s)	905, 1181, 1719, 1722
FokI	GGATG	5 cut(s)	137, 272, 347, 1349, 1417
Fsp4HI	GCNGC	4 cut(s)	905, 1181, 1719, 1722
FspBI	CTAG	6 cut(s)	90, 515, 596, 1592, 1784, 2086
GlaI	GCGC	2 cut(s)	1443, 1983
GluI	GCNGC	4 cut(s)	905, 1181, 1719, 1722
GsuI	CTGGAG	4 cut(s)	833, 1446, 1499, 1598
HaeII	RGCGCY	1 cut(s)	1985
HaeIII	GGCC	1 cut(s)	785
HapII	CCGG	5 cut(s)	881, 1058, 1177, 1275, 1316
HgaI	GACGC	1 cut(s)	873
HhaI	GCGC	2 cut(s)	1444, 1984
Hin1I	GRCGYC	3 cut(s)	390, 480, 884
Hin6I	GCGC	2 cut(s)	1442, 1982
HinP1I	GCGC	2 cut(s)	1442, 1982
HincII	GTYRAC	1 cut(s)	991
HindII	GTYRAC	1 cut(s)	991
HindIII	AAGCTT	3 cut(s)	836, 1377, 2019
HinfI	GANTC	8 cut(s)	302, 501, 544, 704, 969, 1537, 1693, 2006
HpaII	CCGG	5 cut(s)	881, 1058, 1177, 1275, 1316
HphI	GGTGA	6 cut(s)	8, 45, 67, 1132, 1523, 1982
Hpy166II	GTNNAC	4 cut(s)	301, 888, 952, 991
Hpy188I	TCNGA	4 cut(s)	678, 843, 1132, 1169
Hpy188III	TCNNGA	8 cut(s)	182, 698, 824, 855, 942, 1044, 1139, 1577
Hpy8I	GTNNAC	4 cut(s)	301, 888, 952, 991
HpyAV	CCTTC	5 cut(s)	15, 429, 666, 803, 1831
HpyCH4III	ACNGT	4 cut(s)	57, 1041, 1257, 1777
HpyCH4IV	ACGT	3 cut(s)	390, 480, 1083
HpyF10VI	GCNNNNNNNGC	7 cut(s)	374, 468, 890, 1180, 1186, 1588, 1946
HpyF3I	CTNAG	7 cut(s)	1129, 1203, 1364, 1682, 1955, 2012, 2078
HpySE526I	ACGT	3 cut(s)	390, 480, 1083
Hsp92I	GRCGYC	3 cut(s)	390, 480, 884
HspAI	GCGC	2 cut(s)	1442, 1982
Kzo9I	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
LmnI	GCTCC	3 cut(s)	678, 1179, 1579
Lsp1109I	GCAGC	3 cut(s)	916, 1167, 1733
LweI	GCATC	2 cut(s)	281, 1327
MaeI	CTAG	6 cut(s)	90, 515, 596, 1592, 1784, 2086
MaeII	ACGT	3 cut(s)	390, 480, 1083
MaeIII	GTNAC	4 cut(s)	646, 1270, 1436, 1972
MalI	GATC	6 cut(s)	284, 344, 725, 918, 1020, 1328
MbiI	CCGCTC	1 cut(s)	14
MboI	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
MfeI	CAATTG	1 cut(s)	1603
MflI	RGATCY	2 cut(s)	723, 1326
MhlI	GDGCHC	1 cut(s)	627
MlsI	TGGCCA	1 cut(s)	785
MluCI	AATT	9 cut(s)	40, 603, 1110, 1358, 1410, 1603, 1794, 1853, 1929
MluNI	TGGCCA	1 cut(s)	785
MlyI	GAGTC	6 cut(s)	296, 553, 713, 978, 1531, 1702
Mox20I	TGGCCA	1 cut(s)	785
MroXI	GAANNNNTTC	3 cut(s)	403, 837, 1841
MscI	TGGCCA	1 cut(s)	785
MseI	TTAA	6 cut(s)	149, 683, 1065, 1221, 1413, 1809
MslI	CAYNNNNRTG	2 cut(s)	99, 1157
Msp20I	TGGCCA	1 cut(s)	785
MspI	CCGG	5 cut(s)	881, 1058, 1177, 1275, 1316
MspR9I	CCNGG	4 cut(s)	665, 975, 1251, 1425
MunI	CAATTG	1 cut(s)	1603
Mva1269I	GAATGC	2 cut(s)	1638, 1894
MvaI	CCWGG	4 cut(s)	665, 975, 1251, 1425
MvnI	CGCG	1 cut(s)	1442
MwoI	GCNNNNNNNGC	7 cut(s)	374, 468, 890, 1180, 1186, 1588, 1946
NcoI	CCATGG	1 cut(s)	1454
NdeII	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
NlaIV	GGNNCC	1 cut(s)	1137
NmuCI	GTSAC	1 cut(s)	1270
NspI	RCATGY	5 cut(s)	104, 631, 931, 1009, 1552
NspV	TTCGAA	2 cut(s)	999, 1734
PaeI	GCATGC	1 cut(s)	1552
PaeR7I	CTCGAG	1 cut(s)	180
PcsI	WCGNNNNNNNCGW	1 cut(s)	996
PctI	GAATGC	2 cut(s)	1638, 1894
PdmI	GAANNNNTTC	3 cut(s)	403, 837, 1841
PfeI	GAWTC	2 cut(s)	501, 2006
Pfl23II	CGTACG	1 cut(s)	357
PflFI	GACNNNGTC	1 cut(s)	305
PfoI	TCCNGGA	2 cut(s)	663, 1249
PkrI	GCNGC	4 cut(s)	906, 1182, 1720, 1723
Ple19I	CGATCG	1 cut(s)	1021
PleI	GAGTC	6 cut(s)	296, 552, 712, 977, 1531, 1701
PpsI	GAGTC	6 cut(s)	296, 552, 712, 977, 1531, 1701
Ppu21I	YACGTR	1 cut(s)	1084
PpuMI	RGGWCCY	1 cut(s)	1899
Psp5II	RGGWCCY	1 cut(s)	1899
Psp6I	CCWGG	4 cut(s)	663, 973, 1249, 1423
PspGI	CCWGG	4 cut(s)	663, 973, 1249, 1423
PspLI	CGTACG	1 cut(s)	357
PspN4I	GGNNCC	1 cut(s)	1137
PspPI	GGNCC	1 cut(s)	1899
PspPPI	RGGWCCY	1 cut(s)	1899
PstI	CTGCAG	2 cut(s)	737, 1921
PsuI	RGATCY	2 cut(s)	723, 1326
PsyI	GACNNNGTC	1 cut(s)	305
PvuI	CGATCG	1 cut(s)	1021
RsaI	GTAC	3 cut(s)	359, 1652, 2066
RsaNI	GTAC	3 cut(s)	358, 1651, 2065
RseI	CAYNNNNRTG	2 cut(s)	99, 1157
SalI	GTCGAC	1 cut(s)	989
SaqAI	TTAA	6 cut(s)	149, 683, 1065, 1221, 1413, 1809
SatI	GCNGC	4 cut(s)	905, 1181, 1719, 1722
Sau3AI	GATC	6 cut(s)	282, 342, 723, 916, 1018, 1326
Sau96I	GGNCC	1 cut(s)	1899
SchI	GAGTC	6 cut(s)	296, 553, 713, 978, 1531, 1702
ScrFI	CCNGG	4 cut(s)	665, 975, 1251, 1425
SduI	GDGCHC	1 cut(s)	627
SfaNI	GCATC	2 cut(s)	281, 1327
SfcI	CTRYAG	4 cut(s)	633, 733, 1543, 1917
Sfr274I	CTCGAG	1 cut(s)	180
SfuI	TTCGAA	2 cut(s)	999, 1734
SinI	GGWCC	1 cut(s)	1899
SlaI	CTCGAG	1 cut(s)	180
SmiMI	CAYNNNNRTG	2 cut(s)	99, 1157
SmlI	CTYRAG	2 cut(s)	180, 1622
SmoI	CTYRAG	2 cut(s)	180, 1622
SnaBI	TACGTA	1 cut(s)	1084
SphI	GCATGC	1 cut(s)	1552
Sse9I	AATT	9 cut(s)	40, 603, 1110, 1358, 1410, 1603, 1794, 1853, 1929
SsiI	CCGC	4 cut(s)	12, 60, 161, 1718
SspMI	CTAG	6 cut(s)	90, 515, 596, 1592, 1784, 2086
StyD4I	CCNGG	4 cut(s)	663, 973, 1249, 1423
StyI	CCWWGG	3 cut(s)	378, 1330, 1454
TaaI	ACNGT	4 cut(s)	57, 1041, 1257, 1777
TaiI	ACGT	3 cut(s)	393, 483, 1086
TasI	AATT	9 cut(s)	40, 603, 1110, 1358, 1410, 1603, 1794, 1853, 1929
TauI	GCSGC	1 cut(s)	1721
TfiI	GAWTC	2 cut(s)	501, 2006
Tru1I	TTAA	6 cut(s)	149, 683, 1065, 1221, 1413, 1809
Tru9I	TTAA	6 cut(s)	149, 683, 1065, 1221, 1413, 1809
TscAI	CASTG	2 cut(s)	163, 798
TseFI	GTSAC	1 cut(s)	1270
TseI	GCWGC	3 cut(s)	904, 1180, 1721
Tsp45I	GTSAC	1 cut(s)	1270
TspDTI	ATGAA	6 cut(s)	141, 249, 1834, 1842, 1866, 2087
TspGWI	ACGGA	2 cut(s)	295, 1115
TspRI	CASTG	2 cut(s)	163, 798
Tth111I	GACNNNGTC	1 cut(s)	305
VpaK11BI	GGWCC	1 cut(s)	1899
XapI	RAATTY	4 cut(s)	40, 1110, 1358, 1853
XceI	RCATGY	5 cut(s)	104, 631, 931, 1009, 1552
XcmI	CCANNNNNNNNNTGG	2 cut(s)	455, 959
XhoI	CTCGAG	1 cut(s)	180
XmiI	GTMKAC	2 cut(s)	887, 990
XmnI	GAANNNNTTC	3 cut(s)	403, 837, 1841
XspI	CTAG	6 cut(s)	90, 515, 596, 1592, 1784, 2086
ZraI	GACGTC	2 cut(s)	391, 481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.