Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

53076133 .. 53081570

Gene Structure 5438 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG326600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGCCTTCTTCCGCTCACCACCTCGTTCTCTCTGTCCTAAATTCTCTACCATCACCGTCCGCCTCTTCTTTCTTCACCCACAATCAACCTAGACATTTACATGCAGGTTTTTGGTTTTTCGGGGATGAAGACAAAAGGGTTCTTCCCTTAATATGCAGTGCGGTTTCTAAACCTCGCACTCGAGATTATGCACCCTTGTTGCATAAGATTGTGAAAGATGATACACAACAAAATGAAGAAACTCCTCCTACCAATAAGGATGACAACTCTGCATCGACCCAGATCATCAAGGAACTTGTGGACTCCGTCAAGTCCATGCTGTCTTCTATGGAGGATGGGGAGATCAGCATATCAGCGTACGATACAGCATGGGTTGCTTTGGTCGAAGACGTCAATGGAACTTGTTCGCCTCATTTCCCTTCCAGCCTCGAATGGATTGCCAACAACCAGCTTGAAGATGGCTCTTGGGGCTACAAGGACGTCTTCTCTGCCCACGATCGAATCATCAGCACCCTAGCCTGTGTTGTTGCGTTGAAATCGTGGAGTCTCCACCCGGACAAATGCGACAAAGGAATGAGGTTTTTCAGGGAAAACCTAGACAAAATTGAAGACGAGAATAGTGAGCACATGCCTATAGGGTTTGAAGTTACATTCCCTTCTGTCCTGGAAATAGCTCGGAGCTTAAACCTTGAAGTTCCTGATGAGTCTCCTGTGTTGCATGAGATCTATGCCTGCAGAAACCTGAAACTCTCAAAGATACCGAGGGACATACTGCACAATGTGGCCACATCACTGCTTTATAGCCTTGAAGGAATGGCAGGTCTCGACTGGGAAAAGCTTCTGAAACTCCAGTCCAGAGACGGGTCGTTTCTCTTTTCTCCGGCGTCTACTGCCTACGCATTGCAGCAGACAAAGGATCGAAACTGCATGTCGTATCTGTCAAGAATAGTCCACAAGTTCAATGGAGGAGTCCCTGTTGTGTATCCAGTCGACTTGTTCGAACGCATGTGGGCTGTCGATCGCTTGCAGAGGTTAGGACTTTCCAGATACTTCGAGCCGGAGATTAAGGAGTGTGTTAGATACGTATCAAGGTATTGGACGGAGAAAGGAATTTCGTGGGTGAGAAACTCAGAGGTTCCAGACATCGATGACACATCAATGGGGTTCAGACTGCTCCGGTTGCATGGGCATAAGGTGTCGGCTGAGGTTTATGAGTATTTTAAGAAAGGAAGTGAGTTCTTCTGCTATCCTGGACAGTCGAGCCAAGCTGTGACCGGAATATACAACTTATATAGGGCAAGTCAGTTGGCATTACCGGAAGAGAAGATCCTTGGGGATGCTAAAGAGTTTGCTACTAAATTCCTTAGAGAGAAACAAGCTTCTAATGAGCTTTTGGACAAATGGATGATAATAGGACTTACCTGGAGAGATGATGTTTGGATTGGCAAGACTCTCTACAGCATGCCCTACATTAGCAATAATGTGTATCTGGAGCTGGCAAAGCTAGACTACAACAATTGCCAAGCATTACATCTCAAGGAATGGGACAGCATTCAAAAGTGGTACAAAGAATGGAAACTCGAAGACTATGGATTGAGTGAAAAGAGTCTCCTCACGGCTTATTTTGTTGCGGCAGCGAGCATTTTTGAACCCGAAAGAGCTAATGAGCGATTTGCATGGGCTAAAACGGTATGCCTAGTTGATATAATTGTGTCTTATTTTAAGGGAGAAACTTACGATGAAGATAAGAAGGCTTTCATTTATGAATTCAAAACCTTTTCCAATATGCGAGACTATGAGAATGCAAGGAGGTCCTCCACAAACAAGACTGCAGGGCAAGGAATTGTTGGGGCTTTGCTGGCAACCCTAAGCCAACTCTCATCGGTTACAATGGCGCTACATCACCAAGACATTACCGAATCTCTAAGTCAAGCTTGGGAAAAGTGGCTACTGAAGTGGCAAGAGAAAGGGGAGAGGTACCGAGATGAAGCTGAGCTACTAGTGGAAACAATAAATCAAACCGCTGGCCTTTCACTTCGGCAAAAGTTGTTGTCCGATGCTCCAGAATATGAGCAGCTTTTGGGCCTAACTAACAAAGTTTGCACTCAACTTCGTTATTGCGAAAACCAAAAGAACAAGGTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

715

Amino Acids

82.02

Weight (kDa)

5.68

Isoelectric Point (pI)

36.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	276 - 462	2.1e-41	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	523 - 653	4.8e-06	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	393, 483
Acc36I	ACCTGC	2 cut(s)	95, 809
Acc65I	GGTACC	1 cut(s)	1977
AccB1I	GGYRCC	1 cut(s)	1977
AccBSI	CCGCTC	1 cut(s)	14
AccI	GTMKAC	2 cut(s)	887, 990
AciI	CCGC	5 cut(s)	12, 60, 161, 1631, 2022
AclWI	GGATC	2 cut(s)	924, 1321
AcoI	YGGCCR	1 cut(s)	783
AcsI	RAATTY	4 cut(s)	40, 1110, 1358, 1766
AcuI	CTGAAG	1 cut(s)	1973
AcyI	GRCGYC	3 cut(s)	390, 480, 884
AdeI	CACNNNGTG	1 cut(s)	781
AfaI	GTAC	3 cut(s)	359, 1565, 1979
AfiI	CCNNNNNNNGG	1 cut(s)	861
AhlI	ACTAGT	1 cut(s)	1999
AjnI	CCWGG	3 cut(s)	663, 1249, 1421
Alw21I	GWGCWC	1 cut(s)	627
Alw26I	GTCTC	6 cut(s)	551, 711, 827, 852, 1613, 1785
AlwI	GGATC	2 cut(s)	924, 1321
Ama87I	CYCGRG	1 cut(s)	180
AoxI	GGCC	3 cut(s)	783, 2026, 2083
ApeKI	GCWGC	3 cut(s)	904, 1634, 2074
ApoI	RAATTY	4 cut(s)	40, 1110, 1358, 1766
Asp700I	GAANNNNTTC	3 cut(s)	403, 837, 1754
Asp718I	GGTACC	1 cut(s)	1977
AspLEI	GCGC	1 cut(s)	1897
AspS9I	GGNCC	2 cut(s)	1812, 2083
AsuC2I	CCSGG	1 cut(s)	554
AsuHPI	GGTGA	5 cut(s)	8, 45, 67, 1132, 1895
AsuII	TTCGAA	1 cut(s)	999
AvaI	CYCGRG	1 cut(s)	180
AvaII	GGWCC	1 cut(s)	1812
BalI	TGGCCA	1 cut(s)	785
BanI	GGYRCC	1 cut(s)	1977
BarI	GAAGNNNNNNTAC	2 cut(s)	1980, 2012
BbsI	GAAGAC	6 cut(s)	135, 315, 393, 475, 615, 1590
Bbv12I	GWGCWC	1 cut(s)	627
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	3 cut(s)	916, 1646, 2086
BccI	CCATC	3 cut(s)	58, 329, 452
BceAI	ACGGC	1 cut(s)	1632
BcgI	CGANNNNNNTGC	2 cut(s)	419, 453
BciT130I	CCWGG	3 cut(s)	665, 1251, 1423
BciVI	GTATCC	1 cut(s)	993
BcnI	CCSGG	1 cut(s)	554
BcoDI	GTCTC	6 cut(s)	551, 711, 827, 852, 1613, 1785
BcuI	ACTAGT	1 cut(s)	1999
BfaI	CTAG	6 cut(s)	90, 515, 596, 1505, 1697, 2000
BfmI	CTRYAG	4 cut(s)	633, 733, 1456, 1830
BfoI	RGCGCY	1 cut(s)	1898
BfuAI	ACCTGC	2 cut(s)	95, 809
BfuI	GTATCC	1 cut(s)	993
BglII	AGATCT	1 cut(s)	723
BisI	GCNGC	4 cut(s)	905, 1632, 1635, 2075
BlpI	GCTNAGC	1 cut(s)	1992
BlsI	GCNGC	4 cut(s)	906, 1633, 1636, 2076
Bme1390I	CCNGG	4 cut(s)	554, 665, 1251, 1423
Bme18I	GGWCC	1 cut(s)	1812
BmeT110I	CYCGRG	1 cut(s)	180
BmgT120I	GGNCC	2 cut(s)	1812, 2083
BmiI	GGNNCC	2 cut(s)	1137, 1979
BmrFI	CCNGG	4 cut(s)	554, 665, 1251, 1423
BmrI	ACTGGG	1 cut(s)	838
BmsI	GCATC	3 cut(s)	281, 1327, 2047
BmuI	ACTGGG	1 cut(s)	838
BpiI	GAAGAC	6 cut(s)	135, 315, 393, 475, 615, 1590
BpmI	CTGGAG	4 cut(s)	833, 1444, 1511, 2046
Bpu10I	CCTNAGC	2 cut(s)	1203, 1868
Bpu1102I	GCTNAGC	1 cut(s)	1992
Bpu14I	TTCGAA	1 cut(s)	999
BpuEI	CTTGAG	1 cut(s)	1520
BpuMI	CCSGG	1 cut(s)	554
Bsa29I	ATCGAT	1 cut(s)	1146
BsaAI	YACGTR	1 cut(s)	1084
BsaBI	GATNNNNATC	1 cut(s)	1084
BsaHI	GRCGYC	3 cut(s)	390, 480, 884
BsaI	GGTCTC	1 cut(s)	827
BsaJI	CCNNGG	2 cut(s)	761, 1330
BsaWI	WCCGGW	3 cut(s)	1176, 1274, 1315
BsaXI	ACNNNNNCTCC	2 cut(s)	960, 990
Bsc4I	CCNNNNNNNGG	1 cut(s)	861
Bse1I	ACTGG	3 cut(s)	833, 850, 986
Bse3DI	GCAATG	1 cut(s)	899
Bse8I	GATNNNNATC	1 cut(s)	1084
BseBI	CCWGG	3 cut(s)	665, 1251, 1423
BseCI	ATCGAT	1 cut(s)	1146
BseDI	CCNNGG	2 cut(s)	761, 1330
BseGI	GGATG	5 cut(s)	130, 265, 340, 1342, 1410
BseJI	GATNNNNATC	1 cut(s)	1084
BseLI	CCNNNNNNNGG	1 cut(s)	861
BseMI	GCAATG	1 cut(s)	899
BseMII	CTCAG	3 cut(s)	1143, 1194, 1983
BseNI	ACTGG	3 cut(s)	833, 850, 986
BseRI	GAGGAG	3 cut(s)	234, 981, 1601
BseXI	GCAGC	3 cut(s)	916, 1646, 2086
BsgI	GTGCAG	1 cut(s)	758
Bsh1285I	CGRYCG	2 cut(s)	499, 1021
BshFI	GGCC	3 cut(s)	785, 2028, 2085
BshNI	GGYRCC	1 cut(s)	1977
BshVI	ATCGAT	1 cut(s)	1146
BsiEI	CGRYCG	2 cut(s)	499, 1021
BsiHKAI	GWGCWC	1 cut(s)	627
BsiHKCI	CYCGRG	1 cut(s)	180
BsiSI	CCGG	6 cut(s)	554, 881, 1058, 1177, 1275, 1316
BsiWI	CGTACG	1 cut(s)	357
BslFI	GGGAC	3 cut(s)	779, 956, 1559
BslI	CCNNNNNNNGG	1 cut(s)	861
BsmAI	GTCTC	6 cut(s)	551, 711, 827, 852, 1613, 1785
BsmBI	CGTCTC	1 cut(s)	852
BsmFI	GGGAC	3 cut(s)	779, 956, 1559
BsmI	GAATGC	2 cut(s)	1551, 1807
BsnI	GGCC	3 cut(s)	785, 2028, 2085
Bso31I	GGTCTC	1 cut(s)	827
BsoBI	CYCGRG	1 cut(s)	180
Bsp119I	TTCGAA	1 cut(s)	999
Bsp1286I	GDGCHC	1 cut(s)	627
Bsp143I	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
Bsp1720I	GCTNAGC	1 cut(s)	1992
BspACI	CCGC	5 cut(s)	12, 60, 161, 1631, 2022
BspANI	GGCC	3 cut(s)	785, 2028, 2085
BspCNI	CTCAG	3 cut(s)	1142, 1195, 1984
BspDI	ATCGAT	1 cut(s)	1146
BspLI	GGNNCC	2 cut(s)	1137, 1979
BspMAI	CTGCAG	2 cut(s)	737, 1834
BspMI	ACCTGC	2 cut(s)	95, 809
BspPI	GGATC	2 cut(s)	924, 1321
BspT104I	TTCGAA	1 cut(s)	999
BspT107I	GGYRCC	1 cut(s)	1977
BspTNI	GGTCTC	1 cut(s)	827
BsrBI	CCGCTC	1 cut(s)	14
BsrDI	GCAATG	1 cut(s)	899
BsrI	ACTGG	3 cut(s)	833, 850, 986
BssECI	CCNNGG	2 cut(s)	761, 1330
BssMI	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
BssNI	GRCGYC	3 cut(s)	390, 480, 884
BssT1I	CCWWGG	1 cut(s)	1330
Bst2UI	CCWGG	3 cut(s)	665, 1251, 1423
Bst4CI	ACNGT	3 cut(s)	57, 1257, 1690
Bst6I	CTCTTC	2 cut(s)	70, 1314
BstACI	GRCGYC	3 cut(s)	390, 480, 884
BstAPI	GCANNNNNTGC	1 cut(s)	374
BstBAI	YACGTR	1 cut(s)	1084
BstBI	TTCGAA	1 cut(s)	999
BstC8I	GCNNGC	7 cut(s)	733, 1025, 1463, 1497, 1639, 1860, 2026
BstDEI	CTNAG	6 cut(s)	1129, 1203, 1364, 1868, 1925, 1992
BstF5I	GGATG	5 cut(s)	130, 265, 340, 1342, 1410
BstH2I	RGCGCY	1 cut(s)	1898
BstHHI	GCGC	1 cut(s)	1897
BstKTI	GATC	7 cut(s)	285, 345, 499, 726, 919, 1021, 1329
BstMAI	GTCTC	6 cut(s)	551, 711, 827, 852, 1613, 1785
BstMBI	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
BstMCI	CGRYCG	2 cut(s)	499, 1021
BstMWI	GCNNNNNNNGC	6 cut(s)	374, 468, 890, 1180, 1501, 1859
BstNI	CCWGG	3 cut(s)	665, 1251, 1423
BstNSI	RCATGY	5 cut(s)	104, 631, 931, 1009, 1465
BstSCI	CCNGG	4 cut(s)	552, 663, 1249, 1421
BstSFI	CTRYAG	4 cut(s)	633, 733, 1456, 1830
BstSNI	TACGTA	1 cut(s)	1084
BstV1I	GCAGC	3 cut(s)	916, 1646, 2086
BstV2I	GAAGAC	6 cut(s)	135, 315, 393, 475, 615, 1590
BstX2I	RGATCY	2 cut(s)	723, 1326
BstYI	RGATCY	2 cut(s)	723, 1326
Bsu15I	ATCGAT	1 cut(s)	1146
BsuI	GTATCC	1 cut(s)	993
BsuRI	GGCC	3 cut(s)	785, 2028, 2085
BsuTUI	ATCGAT	1 cut(s)	1146
BtsCI	GGATG	5 cut(s)	130, 265, 340, 1342, 1410
BtsI	GCAGTG	2 cut(s)	163, 791
BtsIMutI	CAGTG	2 cut(s)	163, 791
BveI	ACCTGC	2 cut(s)	95, 809
Cac8I	GCNNGC	7 cut(s)	733, 1025, 1463, 1497, 1639, 1860, 2026
CfoI	GCGC	1 cut(s)	1897
Cfr13I	GGNCC	2 cut(s)	1812, 2083
ClaI	ATCGAT	1 cut(s)	1146
CseI	GACGC	1 cut(s)	873
Csp6I	GTAC	3 cut(s)	358, 1564, 1978
CviQI	GTAC	3 cut(s)	358, 1564, 1978
DdeI	CTNAG	6 cut(s)	1129, 1203, 1364, 1868, 1925, 1992
DpnI	GATC	7 cut(s)	284, 344, 498, 725, 918, 1020, 1328
DpnII	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
DraIII	CACNNNGTG	1 cut(s)	781
EaeI	YGGCCR	1 cut(s)	783
Eam1104I	CTCTTC	2 cut(s)	70, 1314
EarI	CTCTTC	2 cut(s)	70, 1314
EciI	GGCGGA	1 cut(s)	49
Eco105I	TACGTA	1 cut(s)	1084
Eco130I	CCWWGG	1 cut(s)	1330
Eco31I	GGTCTC	1 cut(s)	827
Eco47I	GGWCC	1 cut(s)	1812
Eco57I	CTGAAG	1 cut(s)	1973
Eco88I	CYCGRG	1 cut(s)	180
EcoO109I	RGGNCCY	1 cut(s)	1812
EcoRI	GAATTC	1 cut(s)	1766
EcoRII	CCWGG	3 cut(s)	663, 1249, 1421
EcoT14I	CCWWGG	1 cut(s)	1330
ErhI	CCWWGG	1 cut(s)	1330
Esp3I	CGTCTC	1 cut(s)	852
FalI	AAGNNNNNCTT	4 cut(s)	467, 499, 1918, 1950
FaqI	GGGAC	3 cut(s)	779, 956, 1559
FblI	GTMKAC	2 cut(s)	887, 990
Fnu4HI	GCNGC	4 cut(s)	905, 1632, 1635, 2075
FokI	GGATG	5 cut(s)	137, 272, 347, 1349, 1417
Fsp4HI	GCNGC	4 cut(s)	905, 1632, 1635, 2075
FspBI	CTAG	6 cut(s)	90, 515, 596, 1505, 1697, 2000
GlaI	GCGC	1 cut(s)	1896
GluI	GCNGC	4 cut(s)	905, 1632, 1635, 2075
GsuI	CTGGAG	4 cut(s)	833, 1444, 1511, 2046
HaeII	RGCGCY	1 cut(s)	1898
HaeIII	GGCC	3 cut(s)	785, 2028, 2085
HapII	CCGG	6 cut(s)	554, 881, 1058, 1177, 1275, 1316
HgaI	GACGC	1 cut(s)	873
HhaI	GCGC	1 cut(s)	1897
Hin1I	GRCGYC	3 cut(s)	390, 480, 884
Hin6I	GCGC	1 cut(s)	1895
HinP1I	GCGC	1 cut(s)	1895
HincII	GTYRAC	1 cut(s)	991
HindII	GTYRAC	1 cut(s)	991
HindIII	AAGCTT	3 cut(s)	836, 1377, 1932
HinfI	GANTC	8 cut(s)	302, 501, 544, 704, 969, 1450, 1606, 1919
HpaII	CCGG	6 cut(s)	554, 881, 1058, 1177, 1275, 1316
HphI	GGTGA	5 cut(s)	8, 45, 67, 1132, 1895
Hpy166II	GTNNAC	4 cut(s)	301, 888, 952, 991
Hpy188I	TCNGA	5 cut(s)	678, 843, 1132, 1169, 2056
Hpy188III	TCNNGA	9 cut(s)	182, 698, 824, 855, 942, 1044, 1139, 1490, 2063
Hpy8I	GTNNAC	4 cut(s)	301, 888, 952, 991
HpyAV	CCTTC	5 cut(s)	15, 429, 666, 803, 1744
HpyCH4III	ACNGT	3 cut(s)	57, 1257, 1690
HpyCH4IV	ACGT	3 cut(s)	390, 480, 1083
HpyF10VI	GCNNNNNNNGC	6 cut(s)	374, 468, 890, 1180, 1501, 1859
HpyF3I	CTNAG	6 cut(s)	1129, 1203, 1364, 1868, 1925, 1992
HpySE526I	ACGT	3 cut(s)	390, 480, 1083
Hsp92I	GRCGYC	3 cut(s)	390, 480, 884
HspAI	GCGC	1 cut(s)	1895
KpnI	GGTACC	1 cut(s)	1981
Kzo9I	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
LmnI	GCTCC	4 cut(s)	678, 1179, 1492, 2065
Lsp1109I	GCAGC	3 cut(s)	916, 1646, 2086
LweI	GCATC	3 cut(s)	281, 1327, 2047
MaeI	CTAG	6 cut(s)	90, 515, 596, 1505, 1697, 2000
MaeII	ACGT	3 cut(s)	390, 480, 1083
MaeIII	GTNAC	4 cut(s)	646, 1270, 1885, 2140
MalI	GATC	7 cut(s)	284, 344, 498, 725, 918, 1020, 1328
MbiI	CCGCTC	1 cut(s)	14
MboI	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
MfeI	CAATTG	1 cut(s)	1516
MflI	RGATCY	2 cut(s)	723, 1326
MhlI	GDGCHC	1 cut(s)	627
MlsI	TGGCCA	1 cut(s)	785
MluCI	AATT	8 cut(s)	40, 603, 1110, 1358, 1516, 1707, 1766, 1842
MluNI	TGGCCA	1 cut(s)	785
MlyI	GAGTC	6 cut(s)	296, 553, 713, 978, 1444, 1615
Mox20I	TGGCCA	1 cut(s)	785
MroXI	GAANNNNTTC	3 cut(s)	403, 837, 1754
MscI	TGGCCA	1 cut(s)	785
MseI	TTAA	5 cut(s)	149, 683, 1065, 1221, 1722
MslI	CAYNNNNRTG	2 cut(s)	99, 1157
Msp20I	TGGCCA	1 cut(s)	785
MspA1I	CMGCKG	1 cut(s)	2024
MspI	CCGG	6 cut(s)	554, 881, 1058, 1177, 1275, 1316
MspR9I	CCNGG	4 cut(s)	554, 665, 1251, 1423
MunI	CAATTG	1 cut(s)	1516
Mva1269I	GAATGC	2 cut(s)	1551, 1807
MvaI	CCWGG	3 cut(s)	665, 1251, 1423
MwoI	GCNNNNNNNGC	6 cut(s)	374, 468, 890, 1180, 1501, 1859
NciI	CCSGG	1 cut(s)	554
NdeII	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
NlaIV	GGNNCC	2 cut(s)	1137, 1979
NmuCI	GTSAC	1 cut(s)	1270
NspI	RCATGY	5 cut(s)	104, 631, 931, 1009, 1465
NspV	TTCGAA	1 cut(s)	999
PaeI	GCATGC	1 cut(s)	1465
PaeR7I	CTCGAG	1 cut(s)	180
PcsI	WCGNNNNNNNCGW	1 cut(s)	996
PctI	GAATGC	2 cut(s)	1551, 1807
PdmI	GAANNNNTTC	3 cut(s)	403, 837, 1754
PfeI	GAWTC	2 cut(s)	501, 1919
Pfl23II	CGTACG	1 cut(s)	357
PflFI	GACNNNGTC	1 cut(s)	305
PfoI	TCCNGGA	2 cut(s)	663, 1249
PkrI	GCNGC	4 cut(s)	906, 1633, 1636, 2076
Ple19I	CGATCG	2 cut(s)	499, 1021
PleI	GAGTC	6 cut(s)	296, 552, 712, 977, 1444, 1614
PpsI	GAGTC	6 cut(s)	296, 552, 712, 977, 1444, 1614
Ppu21I	YACGTR	1 cut(s)	1084
PpuMI	RGGWCCY	1 cut(s)	1812
Psp5II	RGGWCCY	1 cut(s)	1812
Psp6I	CCWGG	3 cut(s)	663, 1249, 1421
PspGI	CCWGG	3 cut(s)	663, 1249, 1421
PspLI	CGTACG	1 cut(s)	357
PspN4I	GGNNCC	2 cut(s)	1137, 1979
PspPI	GGNCC	2 cut(s)	1812, 2083
PspPPI	RGGWCCY	1 cut(s)	1812
PstI	CTGCAG	2 cut(s)	737, 1834
PsuI	RGATCY	2 cut(s)	723, 1326
PsyI	GACNNNGTC	1 cut(s)	305
PvuI	CGATCG	2 cut(s)	499, 1021
RsaI	GTAC	3 cut(s)	359, 1565, 1979
RsaNI	GTAC	3 cut(s)	358, 1564, 1978
RseI	CAYNNNNRTG	2 cut(s)	99, 1157
SalI	GTCGAC	1 cut(s)	989
SaqAI	TTAA	5 cut(s)	149, 683, 1065, 1221, 1722
SatI	GCNGC	4 cut(s)	905, 1632, 1635, 2075
Sau3AI	GATC	7 cut(s)	282, 342, 496, 723, 916, 1018, 1326
Sau96I	GGNCC	2 cut(s)	1812, 2083
SchI	GAGTC	6 cut(s)	296, 553, 713, 978, 1444, 1615
ScrFI	CCNGG	4 cut(s)	554, 665, 1251, 1423
SduI	GDGCHC	1 cut(s)	627
SfaNI	GCATC	3 cut(s)	281, 1327, 2047
SfcI	CTRYAG	4 cut(s)	633, 733, 1456, 1830
Sfr274I	CTCGAG	1 cut(s)	180
SfuI	TTCGAA	1 cut(s)	999
SinI	GGWCC	1 cut(s)	1812
SlaI	CTCGAG	1 cut(s)	180
SmiMI	CAYNNNNRTG	2 cut(s)	99, 1157
SmlI	CTYRAG	2 cut(s)	180, 1535
SmoI	CTYRAG	2 cut(s)	180, 1535
SnaBI	TACGTA	1 cut(s)	1084
SpeI	ACTAGT	1 cut(s)	1999
SphI	GCATGC	1 cut(s)	1465
Sse9I	AATT	8 cut(s)	40, 603, 1110, 1358, 1516, 1707, 1766, 1842
SsiI	CCGC	5 cut(s)	12, 60, 161, 1631, 2022
SspMI	CTAG	6 cut(s)	90, 515, 596, 1505, 1697, 2000
StyD4I	CCNGG	4 cut(s)	552, 663, 1249, 1421
StyI	CCWWGG	1 cut(s)	1330
TaaI	ACNGT	3 cut(s)	57, 1257, 1690
TaiI	ACGT	3 cut(s)	393, 483, 1086
TasI	AATT	8 cut(s)	40, 603, 1110, 1358, 1516, 1707, 1766, 1842
TauI	GCSGC	1 cut(s)	1634
TfiI	GAWTC	2 cut(s)	501, 1919
Tru1I	TTAA	5 cut(s)	149, 683, 1065, 1221, 1722
Tru9I	TTAA	5 cut(s)	149, 683, 1065, 1221, 1722
TscAI	CASTG	2 cut(s)	163, 798
TseFI	GTSAC	1 cut(s)	1270
TseI	GCWGC	3 cut(s)	904, 1634, 2074
Tsp45I	GTSAC	1 cut(s)	1270
TspDTI	ATGAA	6 cut(s)	141, 249, 1747, 1755, 1779, 2001
TspGWI	ACGGA	2 cut(s)	295, 1115
TspRI	CASTG	2 cut(s)	163, 798
Tth111I	GACNNNGTC	1 cut(s)	305
VpaK11BI	GGWCC	1 cut(s)	1812
XapI	RAATTY	4 cut(s)	40, 1110, 1358, 1766
XceI	RCATGY	5 cut(s)	104, 631, 931, 1009, 1465
XcmI	CCANNNNNNNNNTGG	2 cut(s)	455, 959
XhoI	CTCGAG	1 cut(s)	180
XmiI	GTMKAC	2 cut(s)	887, 990
XmnI	GAANNNNTTC	3 cut(s)	403, 837, 1754
XspI	CTAG	6 cut(s)	90, 515, 596, 1505, 1697, 2000
ZraI	GACGTC	2 cut(s)	391, 481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.