Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

34490071 .. 34494862

Gene Structure 4792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0216000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGAGATGGGAAGAGATCTTAAGTTGGACTCTGCTGGAATATTGAGGAAATTTAGGAGAAGTTTTGAGAAGAATTCGGAATCACCAAGTCTTGGAAAAGTGATTCAAAAAACACATTCATTAGGTTCCCAACTGTTAGACAATTTTGATGAAGGACTTACTAACAGGGGTCCTATTAATGTTGGGTATGAGATGAAATCAGCTTCCATTCTCAGCAAGGCTTCCAGCAGTAATGGGTTGCGACGTTATTCTTTTTCTCTTGCTGCAGGAGAAATCTCAGATCATATTGCCTTGAGAGTGCAGAGCCAGAGTCCAAAACAGAAAAACAATATTTCAACAGCTCGACCTACAGCAACAGAAGAAGATACAGATGAAGGGAGAATAATACATACAGAACCTACCTTGCCAATTTATCTCAAGTTCCAAGATGTCAAGTATAAGGTAGCTGCAAAGGGTGTGAAGAGCTCAAATGTAAACTGTATACTGCAAGGCGTCACTGGATCAGTACATCCAGGGGAGATTCTTGCTCTAATGGGACCATCAGGAGGGGGCAAAACAACTTTGCTTAATCTCCTCAGTGGACGGGCCAAACTCAACAGTGGTACCATTACTTACAATGACCAACCGTACACCAAGTCTCTAAAACAAAGGATTGGCTATGTAATGCAAGATGATCTTTTGTTCCCTCACCTCACAGTCAAAGAAACTCTTACTTATGCTGCTCTGCTCCGTCTTCCCATTACCTTAACCAAAAACCAGAAAAAAGAAAGAGCCATGCATGTGATCAATGTGTTAGGCCTGGAAAGGTGTCAAGATACAATAATTGGTGGAACATTTGTTAGAGGAGTTTCTGGTGGTGAGAAAAAGAGAGTGTGCATTGGCAACGAAATTCTGCTCAACCCATCACTTCTGTTTTTAGACGAACCAACATCTGGTCTTGATTCAACCGCTGCATTTCGAATACTGCAGATGCTGCACATAATTGCAGAGGTACTGGTATTGGCTGGCAAAACAGTGGTGACTACAATACATCAACCATCAAGTAGAATCTTTAGCAAGTTTGACAAACTTATACTCTTGGGTAGAGGAAGCTCCTTGTACTTCGGAAAAGCCTCCGAAGCAATGATGTACTTCTCCTCCATTGGTTATGCTCCACTTATAGCTATGAATCCAGCCGAGTTTCTCATTGATCTTGCAAATGGCAACACAACTGATAAATCATTTCCAACTGCAGTTGATGTCCACGAGTTTCTAGTTGAAGCCAATCAAGACAGACTCGCAAAAATGGAGAACAAAAAGTTCCTAAACTCTGTAATGATGCATCATGGTGAGAACCAGATGCAGGGGAAGTCTTATTTAAAGGAATCAAAGGCAACTTGGTGCGAACAGTTTTCAATTCTTTTCCGGAGGGGACTCAAGGAGAGACGCTATGAATACTTGAGCAGTATGCGTGTACTTCAAGTTATATCGACTGCTATAATCGTAGGACTCCTCTGGTGGCACTCCAATGCTTCAACCCCAAAACACCTTCACGATCAGGCAGGGATATTGTTCTTCATTTCAGTATTCTGGGCTTTTTTCCCTCTATTCACTGCAATTTTCACATTTCCACAAGAAAGAGCAATACTAGTTAAAGAGAGATCAGTGGAGATGTACAAACTGAGCTCTTACTTTTTGGCTAGAAACATTAGTGATCTTCCTCTGGATCTCCTGCTTCCCATAGTGTTCCTGTTGATAGTTTATATGATGGTGGGATTGAAGCGGACTTTTGCTGCATTTTTTGAAACAATGCTTACAATTTTCCTCAGCATTGTAGCCGCTCAGGGCCTGGGACTGAGCATAGGTGCAGCATTTATTGATTTGAAGAAGGCAACAACTCTTGCTTCCATCATTGTTATGACCTTCATGTTGACTGGTGGATTTTTCATCCAGAAAGTTCCATCAATTATTTCGTGGGTGCGCTATATCTCGTTCAACTATCACACGTACAGGCTACTGCTGAAAATTCAGTATGGTTGTTCCGGCTCAGATTCAGGCTCAGGCACAGCAGGGTACGAATCTTGTGAGTCTCCCTTCATCAAAGAACTAAGACTTGATTCAGGTGGCATGGAAGTGGGAGTTATGATGATAATGATCATTGGGTACCGATTACTGGCCTATTTATTACTCAAGACAATGAAGCTCCGGACAATGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

732

Amino Acids

81.53

Weight (kDa)

9.45

Isoelectric Point (pI)

37.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	162 - 311	1.3e-32	ABC transporter
ABC2_membrane_7	PF19055	344 - 407	1.2e-06	ABC-2 type transporter
ABC2_membrane	PF01061	462 - 671	5.8e-42	ABC-2 type transporter
ABC2_membrane_3	PF12698	516 - 721	1.3e-09	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	602, 2142
AccB1I	GGYRCC	2 cut(s)	602, 2142
AccB7I	CCANNNNNTGG	2 cut(s)	92, 932
AccBSI	CCGCTC	1 cut(s)	1820
AccI	GTMKAC	1 cut(s)	481
AccIII	TCCGGA	2 cut(s)	1404, 2184
AciI	CCGC	3 cut(s)	948, 1762, 1818
AclWI	GGATC	2 cut(s)	508, 1713
AcsI	RAATTY	4 cut(s)	50, 73, 888, 2004
AcyI	GRCGYC	1 cut(s)	492
AfiI	CCNNNNNNNGG	5 cut(s)	92, 545, 932, 1342, 2152
AflII	CTTAAG	1 cut(s)	20
AflIII	ACRYGT	1 cut(s)	1983
AhlI	ACTAGT	1 cut(s)	1627
AjnI	CCWGG	3 cut(s)	511, 798, 1827
AluBI	AGCT	8 cut(s)	203, 341, 446, 465, 1092, 1163, 1665, 2182
AluI	AGCT	8 cut(s)	203, 341, 446, 465, 1092, 1163, 1665, 2182
Alw21I	GWGCWC	2 cut(s)	467, 1667
Alw26I	GTCTC	3 cut(s)	642, 1417, 2073
AlwI	GGATC	2 cut(s)	508, 1713
AlwNI	CAGNNNCTG	2 cut(s)	973, 1828
Aor13HI	TCCGGA	2 cut(s)	1404, 2184
AoxI	GGCC	4 cut(s)	585, 796, 1825, 2154
ApeKI	GCWGC	7 cut(s)	263, 446, 719, 950, 973, 1772, 1847
ApoI	RAATTY	4 cut(s)	50, 73, 888, 2004
AseI	ATTAAT	1 cut(s)	177
Asp718I	GGTACC	2 cut(s)	602, 2142
AspLEI	GCGC	1 cut(s)	1962
AspS9I	GGNCC	4 cut(s)	170, 536, 585, 1825
AsuHPI	GGTGA	5 cut(s)	75, 680, 869, 1030, 1340
AsuII	TTCGAA	1 cut(s)	958
AvaII	GGWCC	2 cut(s)	170, 536
BaeI	ACNNNNGTAYC	2 cut(s)	586, 619
BanI	GGYRCC	2 cut(s)	602, 2142
BanII	GRGCYC	2 cut(s)	467, 1667
BauI	CACGAG	1 cut(s)	1244
BbsI	GAAGAC	1 cut(s)	725
Bbv12I	GWGCWC	2 cut(s)	467, 1667
BbvCI	CCTCAGC	1 cut(s)	1805
BbvI	GCAGC	7 cut(s)	250, 433, 706, 937, 960, 1759, 1859
BccI	CCATC	6 cut(s)	547, 910, 1045, 1741, 1895, 1948
BciT130I	CCWGG	3 cut(s)	513, 800, 1829
BclI	TGATCA	2 cut(s)	783, 2133
BcoDI	GTCTC	3 cut(s)	642, 1417, 2073
BcuI	ACTAGT	1 cut(s)	1627
BfaI	CTAG	3 cut(s)	1253, 1628, 1680
BfmI	CTRYAG	4 cut(s)	264, 348, 965, 1230
BfrI	CTTAAG	1 cut(s)	20
BglII	AGATCT	1 cut(s)	16
BisI	GCNGC	8 cut(s)	264, 447, 720, 951, 974, 1773, 1818, 1848
BlsI	GCNGC	8 cut(s)	265, 448, 721, 952, 975, 1774, 1819, 1849
Bme1390I	CCNGG	3 cut(s)	513, 800, 1829
Bme18I	GGWCC	2 cut(s)	170, 536
BmgT120I	GGNCC	4 cut(s)	170, 536, 585, 1825
BmiI	GGNNCC	5 cut(s)	127, 171, 537, 604, 2144
BmrFI	CCNGG	3 cut(s)	513, 800, 1829
BmsI	GCATC	4 cut(s)	960, 1308, 1329, 1330
BpiI	GAAGAC	1 cut(s)	725
Bpu10I	CCTNAGC	3 cut(s)	1805, 1821, 2038
Bpu14I	TTCGAA	1 cut(s)	958
BpuEI	CTTGAG	5 cut(s)	313, 401, 1400, 1459, 2153
BsaAI	YACGTR	1 cut(s)	1986
BsaBI	GATNNNNATC	1 cut(s)	2132
BsaHI	GRCGYC	1 cut(s)	492
BsaJI	CCNNGG	2 cut(s)	512, 1828
BsaWI	WCCGGW	2 cut(s)	1404, 2184
BsaXI	ACNNNNNCTCC	2 cut(s)	1121, 1151
Bsc4I	CCNNNNNNNGG	5 cut(s)	92, 545, 932, 1342, 2152
Bse1I	ACTGG	4 cut(s)	502, 999, 1918, 2157
Bse3DI	GCAATG	1 cut(s)	1128
Bse8I	GATNNNNATC	1 cut(s)	2132
BseAI	TCCGGA	2 cut(s)	1404, 2184
BseBI	CCWGG	3 cut(s)	513, 800, 1829
BseDI	CCNNGG	2 cut(s)	512, 1828
BseGI	GGATG	2 cut(s)	508, 1926
BseJI	GATNNNNATC	1 cut(s)	2132
BseLI	CCNNNNNNNGG	5 cut(s)	92, 545, 932, 1342, 2152
BseMI	GCAATG	1 cut(s)	1128
BseMII	CTCAG	9 cut(s)	226, 291, 589, 1652, 1819, 1826, 1835, 2040, 2052
BseNI	ACTGG	4 cut(s)	502, 999, 1918, 2157
BseRI	GAGGAG	4 cut(s)	563, 858, 1126, 1481
BseXI	GCAGC	7 cut(s)	250, 433, 706, 937, 960, 1759, 1859
BsgI	GTGCAG	3 cut(s)	320, 959, 1866
BshFI	GGCC	4 cut(s)	587, 798, 1827, 2156
BshNI	GGYRCC	2 cut(s)	602, 2142
BsiHKAI	GWGCWC	2 cut(s)	467, 1667
BsiSI	CCGG	3 cut(s)	1405, 2022, 2185
BslFI	GGGAC	3 cut(s)	549, 1425, 1845
BslI	CCNNNNNNNGG	5 cut(s)	92, 545, 932, 1342, 2152
BsmAI	GTCTC	3 cut(s)	642, 1417, 2073
BsmBI	CGTCTC	1 cut(s)	1417
BsmFI	GGGAC	3 cut(s)	549, 1425, 1845
BsnI	GGCC	4 cut(s)	587, 798, 1827, 2156
Bsp119I	TTCGAA	1 cut(s)	958
Bsp1286I	GDGCHC	2 cut(s)	467, 1667
Bsp13I	TCCGGA	2 cut(s)	1404, 2184
Bsp1407I	TGTACA	1 cut(s)	1653
BspACI	CCGC	3 cut(s)	948, 1762, 1818
BspANI	GGCC	4 cut(s)	587, 798, 1827, 2156
BspCNI	CTCAG	9 cut(s)	225, 290, 588, 1653, 1818, 1827, 1834, 2039, 2051
BspEI	TCCGGA	2 cut(s)	1404, 2184
BspLI	GGNNCC	5 cut(s)	127, 171, 537, 604, 2144
BspMAI	CTGCAG	3 cut(s)	268, 969, 1234
BspPI	GGATC	2 cut(s)	508, 1713
BspQI	GCTCTTC	1 cut(s)	455
BspT104I	TTCGAA	1 cut(s)	958
BspT107I	GGYRCC	2 cut(s)	602, 2142
BspTI	CTTAAG	1 cut(s)	20
BsrBI	CCGCTC	1 cut(s)	1820
BsrDI	GCAATG	1 cut(s)	1128
BsrGI	TGTACA	1 cut(s)	1653
BsrI	ACTGG	4 cut(s)	502, 999, 1918, 2157
BssECI	CCNNGG	2 cut(s)	512, 1828
BssNAI	GTATAC	1 cut(s)	482
BssNI	GRCGYC	1 cut(s)	492
BssSI	CACGAG	1 cut(s)	1244
Bst1107I	GTATAC	1 cut(s)	482
Bst2BI	CACGAG	1 cut(s)	1244
Bst2UI	CCWGG	3 cut(s)	513, 800, 1829
Bst4CI	ACNGT	7 cut(s)	135, 479, 599, 627, 697, 1015, 1389
Bst6I	CTCTTC	2 cut(s)	7, 455
BstACI	GRCGYC	1 cut(s)	492
BstAFI	CTTAAG	1 cut(s)	20
BstAPI	GCANNNNNTGC	1 cut(s)	973
BstAUI	TGTACA	1 cut(s)	1653
BstBAI	YACGTR	1 cut(s)	1986
BstBI	TTCGAA	1 cut(s)	958
BstC8I	GCNNGC	1 cut(s)	1006
BstF5I	GGATG	2 cut(s)	508, 1926
BstHHI	GCGC	1 cut(s)	1962
BstMAI	GTCTC	3 cut(s)	642, 1417, 2073
BstMWI	GCNNNNNNNGC	2 cut(s)	973, 1118
BstNI	CCWGG	3 cut(s)	513, 800, 1829
BstNSI	RCATGY	1 cut(s)	782
BstSCI	CCNGG	3 cut(s)	511, 798, 1827
BstSFI	CTRYAG	4 cut(s)	264, 348, 965, 1230
BstV1I	GCAGC	7 cut(s)	250, 433, 706, 937, 960, 1759, 1859
BstV2I	GAAGAC	1 cut(s)	725
BstX2I	RGATCY	2 cut(s)	16, 1705
BstYI	RGATCY	2 cut(s)	16, 1705
BstZ17I	GTATAC	1 cut(s)	482
BsuRI	GGCC	4 cut(s)	587, 798, 1827, 2156
BtsCI	GGATG	2 cut(s)	508, 1926
BtsI	GCAGTG	1 cut(s)	1590
BtsIMutI	CAGTG	6 cut(s)	495, 583, 604, 1020, 1590, 1650
Cac8I	GCNNGC	1 cut(s)	1006
CaiI	CAGNNNCTG	2 cut(s)	973, 1828
CfoI	GCGC	1 cut(s)	1962
Cfr13I	GGNCC	4 cut(s)	170, 536, 585, 1825
CseI	GACGC	2 cut(s)	481, 1434
CviAII	CATG	5 cut(s)	775, 779, 1325, 1906, 2107
DraI	TTTAAA	1 cut(s)	1359
Eam1104I	CTCTTC	2 cut(s)	7, 455
EarI	CTCTTC	2 cut(s)	7, 455
Ecl136II	GAGCTC	2 cut(s)	465, 1665
Eco147I	AGGCCT	1 cut(s)	798
Eco24I	GRGCYC	2 cut(s)	467, 1667
Eco47I	GGWCC	2 cut(s)	170, 536
Eco53kI	GAGCTC	2 cut(s)	465, 1665
EcoICRI	GAGCTC	2 cut(s)	465, 1665
EcoO109I	RGGNCCY	2 cut(s)	170, 1825
EcoRI	GAATTC	1 cut(s)	73
EcoRII	CCWGG	3 cut(s)	511, 798, 1827
EcoT22I	ATGCAT	2 cut(s)	780, 1323
EcoT38I	GRGCYC	2 cut(s)	467, 1667
Esp3I	CGTCTC	1 cut(s)	1417
FaeI	CATG	5 cut(s)	778, 782, 1328, 1909, 2110
FalI	AAGNNNNNCTT	4 cut(s)	660, 692, 693, 725
FaqI	GGGAC	3 cut(s)	549, 1425, 1845
FatI	CATG	5 cut(s)	774, 778, 1324, 1905, 2106
FbaI	TGATCA	2 cut(s)	783, 2133
FblI	GTMKAC	1 cut(s)	481
Fnu4HI	GCNGC	8 cut(s)	264, 447, 720, 951, 974, 1773, 1818, 1848
FokI	GGATG	2 cut(s)	495, 1913
FriOI	GRGCYC	2 cut(s)	467, 1667
Fsp4HI	GCNGC	8 cut(s)	264, 447, 720, 951, 974, 1773, 1818, 1848
FspBI	CTAG	3 cut(s)	1253, 1628, 1680
GlaI	GCGC	1 cut(s)	1961
GluI	GCNGC	8 cut(s)	264, 447, 720, 951, 974, 1773, 1818, 1848
HaeIII	GGCC	4 cut(s)	587, 798, 1827, 2156
HapII	CCGG	3 cut(s)	1405, 2022, 2185
HgaI	GACGC	2 cut(s)	481, 1434
HhaI	GCGC	1 cut(s)	1962
Hin1I	GRCGYC	1 cut(s)	492
Hin1II	CATG	5 cut(s)	778, 782, 1328, 1909, 2110
Hin6I	GCGC	1 cut(s)	1960
HinP1I	GCGC	1 cut(s)	1960
HincII	GTYRAC	1 cut(s)	1911
HindII	GTYRAC	1 cut(s)	1911
HpaII	CCGG	3 cut(s)	1405, 2022, 2185
HphI	GGTGA	5 cut(s)	75, 680, 869, 1030, 1340
Hpy166II	GTNNAC	7 cut(s)	475, 482, 581, 630, 1243, 1454, 1911
Hpy188I	TCNGA	5 cut(s)	79, 280, 1106, 1117, 2029
Hpy8I	GTNNAC	7 cut(s)	475, 482, 581, 630, 1243, 1454, 1911
Hpy99I	CGWCG	1 cut(s)	246
HpyAV	CCTTC	6 cut(s)	146, 368, 1538, 1861, 1912, 2083
HpyCH4III	ACNGT	7 cut(s)	135, 479, 599, 627, 697, 1015, 1389
HpyCH4IV	ACGT	2 cut(s)	244, 1985
HpyF10VI	GCNNNNNNNGC	2 cut(s)	973, 1118
HpySE526I	ACGT	2 cut(s)	244, 1985
Hsp92I	GRCGYC	1 cut(s)	492
Hsp92II	CATG	5 cut(s)	778, 782, 1328, 1909, 2110
HspAI	GCGC	1 cut(s)	1960
Kpn2I	TCCGGA	2 cut(s)	1404, 2184
KpnI	GGTACC	2 cut(s)	606, 2146
Ksp22I	TGATCA	2 cut(s)	783, 2133
LguI	GCTCTTC	1 cut(s)	455
LmnI	GCTCC	4 cut(s)	732, 1097, 1156, 2187
Lsp1109I	GCAGC	7 cut(s)	250, 433, 706, 937, 960, 1759, 1859
LweI	GCATC	4 cut(s)	960, 1308, 1329, 1330
MaeI	CTAG	3 cut(s)	1253, 1628, 1680
MaeII	ACGT	2 cut(s)	244, 1985
MaeIII	GTNAC	2 cut(s)	493, 1018
MbiI	CCGCTC	1 cut(s)	1820
MboII	GAAGA	9 cut(s)	24, 82, 371, 374, 472, 725, 1546, 1688, 1876
MflI	RGATCY	2 cut(s)	16, 1705
MhlI	GDGCHC	2 cut(s)	467, 1667
MlyI	GAGTC	6 cut(s)	23, 319, 1269, 1407, 1482, 2075
MmeI	TCCRAC	2 cut(s)	6, 1250
Mph1103I	ATGCAT	2 cut(s)	780, 1323
MroI	TCCGGA	2 cut(s)	1404, 2184
MseI	TTAA	6 cut(s)	21, 177, 567, 746, 1358, 1632
MslI	CAYNNNNRTG	5 cut(s)	779, 1326, 1506, 1895, 2111
MspA1I	CMGCKG	1 cut(s)	950
MspCI	CTTAAG	1 cut(s)	20
MspI	CCGG	3 cut(s)	1405, 2022, 2185
MspR9I	CCNGG	3 cut(s)	513, 800, 1829
MvaI	CCWGG	3 cut(s)	513, 800, 1829
MwoI	GCNNNNNNNGC	2 cut(s)	973, 1118
NlaIII	CATG	5 cut(s)	778, 782, 1328, 1909, 2110
NlaIV	GGNNCC	5 cut(s)	127, 171, 537, 604, 2144
NmeAIII	GCCGAG	1 cut(s)	1201
NmuCI	GTSAC	2 cut(s)	493, 1018
NsiI	ATGCAT	2 cut(s)	780, 1323
NspI	RCATGY	1 cut(s)	782
NspV	TTCGAA	1 cut(s)	958
PceI	AGGCCT	1 cut(s)	798
PciSI	GCTCTTC	1 cut(s)	455
PflMI	CCANNNNNTGG	2 cut(s)	92, 932
PkrI	GCNGC	8 cut(s)	265, 448, 721, 952, 975, 1774, 1819, 1849
PleI	GAGTC	6 cut(s)	23, 318, 1269, 1407, 1482, 2074
PpsI	GAGTC	6 cut(s)	23, 318, 1269, 1407, 1482, 2074
Ppu21I	YACGTR	1 cut(s)	1986
PpuMI	RGGWCCY	1 cut(s)	170
PshBI	ATTAAT	1 cut(s)	177
Psp124BI	GAGCTC	2 cut(s)	467, 1667
Psp5II	RGGWCCY	1 cut(s)	170
Psp6I	CCWGG	3 cut(s)	511, 798, 1827
PspGI	CCWGG	3 cut(s)	511, 798, 1827
PspN4I	GGNNCC	5 cut(s)	127, 171, 537, 604, 2144
PspPI	GGNCC	4 cut(s)	170, 536, 585, 1825
PspPPI	RGGWCCY	1 cut(s)	170
PstI	CTGCAG	3 cut(s)	268, 969, 1234
PstNI	CAGNNNCTG	2 cut(s)	973, 1828
PsuI	RGATCY	2 cut(s)	16, 1705
RseI	CAYNNNNRTG	5 cut(s)	779, 1326, 1506, 1895, 2111
SacI	GAGCTC	2 cut(s)	467, 1667
SapI	GCTCTTC	1 cut(s)	455
SaqAI	TTAA	6 cut(s)	21, 177, 567, 746, 1358, 1632
SatI	GCNGC	8 cut(s)	264, 447, 720, 951, 974, 1773, 1818, 1848
Sau96I	GGNCC	4 cut(s)	170, 536, 585, 1825
SchI	GAGTC	6 cut(s)	23, 319, 1269, 1407, 1482, 2075
ScrFI	CCNGG	3 cut(s)	513, 800, 1829
SduI	GDGCHC	2 cut(s)	467, 1667
SfaNI	GCATC	4 cut(s)	960, 1308, 1329, 1330
SfcI	CTRYAG	4 cut(s)	264, 348, 965, 1230
SfuI	TTCGAA	1 cut(s)	958
SinI	GGWCC	2 cut(s)	170, 536
SmiMI	CAYNNNNRTG	5 cut(s)	779, 1326, 1506, 1895, 2111
SmlI	CTYRAG	6 cut(s)	20, 292, 416, 1415, 1438, 2168
SmoI	CTYRAG	6 cut(s)	20, 292, 416, 1415, 1438, 2168
SpeI	ACTAGT	1 cut(s)	1627
SseBI	AGGCCT	1 cut(s)	798
SsiI	CCGC	3 cut(s)	948, 1762, 1818
SspI	AATATT	2 cut(s)	42, 331
SspMI	CTAG	3 cut(s)	1253, 1628, 1680
SstI	GAGCTC	2 cut(s)	467, 1667
StuI	AGGCCT	1 cut(s)	798
StyD4I	CCNGG	3 cut(s)	511, 798, 1827
TaaI	ACNGT	7 cut(s)	135, 479, 599, 627, 697, 1015, 1389
TaiI	ACGT	2 cut(s)	247, 1988
TaqI	TCGA	3 cut(s)	343, 958, 1469
TatI	WGTACW	5 cut(s)	505, 1098, 1128, 1453, 1653
TauI	GCSGC	1 cut(s)	1820
Tru1I	TTAA	6 cut(s)	21, 177, 567, 746, 1358, 1632
Tru9I	TTAA	6 cut(s)	21, 177, 567, 746, 1358, 1632
TscAI	CASTG	6 cut(s)	502, 583, 604, 1020, 1597, 1650
TseFI	GTSAC	2 cut(s)	493, 1018
TseI	GCWGC	7 cut(s)	263, 446, 719, 950, 973, 1772, 1847
Tsp45I	GTSAC	2 cut(s)	493, 1018
TspGWI	ACGGA	1 cut(s)	719
TspRI	CASTG	6 cut(s)	502, 583, 604, 1020, 1597, 1650
Van91I	CCANNNNNTGG	2 cut(s)	92, 932
Vha464I	CTTAAG	1 cut(s)	20
VpaK11BI	GGWCC	2 cut(s)	170, 536
VspI	ATTAAT	1 cut(s)	177
XapI	RAATTY	4 cut(s)	50, 73, 888, 2004
XceI	RCATGY	1 cut(s)	782
XmiI	GTMKAC	1 cut(s)	481
XspI	CTAG	3 cut(s)	1253, 1628, 1680
Zsp2I	ATGCAT	2 cut(s)	780, 1323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.