Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Forward (+)

16330329 .. 16338278

Gene Structure 7950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00176670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGTACGGGTGTTTCTCGTCACTTTTCGACTATGGGGATGGAGGTTTCCGGGCGGCGGCTCTACTACTTGCGTTCCTTGGGATGGTGATTGATCCGAGGATGGTGATGCTTAATGTGGTGGCTATTCGGGCTATCTTGGATGACAACTCTGCATCGACCCAGATCATCAAGGAACTTGTGGACTCCGTCAAGTCCATGCTGTCTTCTATGGAGGATGGGGAGATCAGCATATCAGCGTACGATACAGCATGGGTTGCTTTGGTCGAAGACGTCAATGGAACTTGTTCGCCTCATTTCCCTTCCAGCCTCGAATGGATTGCCAACAACCAGCTTGAAGATGGCTCTTGGGGCTACAAGGACGTCTTCTCTGCCCAGGATCGAATCATCAGCACCCTAGCCTGTGTTGTTGCGTTGAAATCGTGGAGTCTCCACCCGGACAAATGCGACAAAGGAATGAGGTTTTTCAGGGAAAACCTAGACAAAATTGAAGACGAGAATAGGGAGCACATGCCTATAGGGTTTGAAGTCACATTCCCTTCTGTCCTGGAAATAGCTCGGAGCTTAAACCTTGAAATTCCTGATGAGTCTCCTGTGTTGCATGAGATCTATGCCTGCAGAAACCTGAAACTCTCAAAGATACCGAGGGACATACTGCACAATGTGGCCACATCACTGCTTTATAGCCTTGAAGGAATGGCAGGTCTCGACTGGGAAAAGCTTCTGAAACTCCAGTCCAGAGACGGGTCGTTTCTCTTTTCTCCGGCGTCTACTGCCTACGCAGTGCAGCAGACAAAGGATCGAAACTGCATGTCGTATCTGTCAAGAATAGTCCACAAGTTCAATGGAGGAGTCCCTGTTGTGTATCCAGTCGACTTATTCGAACGCATGTGGGCTGTCGATCGCTTGCAGAGGTTAGGACTGTCCAGATACTTCGAGCCGGAGATTAAGGAGTGTGTTAGATACGTATCAAGGTATTGGACGGAGAAAGGAATTTCTTGGGTGAGAAACTCAGAGGTTCCAGACATCGATGACACATCAATGGGGTTCAGACTGCTCCGGTTGCATGGGCATAAGGTGTCGGCTGAGGTTTTTGAGTATTTTAAGAAAGGAAGTGAGTTCTTCTGCTATCCTGGACAGTCGAGCCAAGCTGTGACCGGAATATACAACTTATATAGGGCAAGTCAGTTGGCATTACCGGAAGAGAAGATCCTTGGGGATGCTAAAGAGTTTGCTACTAAATTCCTTAGAGAGAAACAAGCTTCTAATGAGCTTTTGGACAAATGGATGATAATTAAGGACTTACCCGGAGAGGTGGGTTACGCGCTGGATTTTCCATGGTATGCGAGCTTACCTCGACTGGAGACTATATTTTACATTGAACAATATGGTGGTGAAGATGATGTTTGGATTGGCAAGACTCTCTACAGCATGCCCTACGTTAGCAATAATGTGTATCTGGAGCTGGCAAAGCTAGACTACAACAATTGCCAAGCATTACATCTCAAGGAATGGGACAACATTCAAAAGTGGTACAAAGAATGGAAACTCGAAGACTGTGGACTGAGTGAAAAGAGTCTCCTCACGGCTTATTTTGTTGCGGCAGCGAGCATTTTCGAACCCGAAAGAGCTAATGAGCGACTTGCATGGGCTAAAACGGAGGTCCTCCACAAACAAGACTGCAGGGCAAGGAATTGTTGGGGCTTTGCTGGCAACCCTAAGCCAACTCTCATCGGTTACAATGGCGCTACATCACCAAGACATTACCGAATCTCTAAATCAAGCTTGGGAAAAGTGGCTAATGAAGTGGCAAGAGAAAGGGAGAGGTACCGAGATGAAGCTGAGCTACTAGTGGAAACAATAAATCAAACCGCTGGCCTTTCACTTCGGCAAAAGTTGTTGTCCGATGCTCCAGAATATGAGCAGCTTTTCAGCCTAACTAACAAAGTTTGCAATCAACTTCGTAAATGGCAACCGCAGAACCAAAATCAACAGGTCAACCCCAGAAATAGGATCATACATGCAGCAATTGGTGGAATTGGTGCTAGAAAAATCTTCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

686

Amino Acids

78.44

Weight (kDa)

5.88

Isoelectric Point (pI)

34.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	236 - 442	7.9e-44	Terpene synthase, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	273, 363
Acc36I	ACCTGC	1 cut(s)	689
Acc65I	GGTACC	1 cut(s)	1824
AccB1I	GGYRCC	1 cut(s)	1824
AccI	GTMKAC	2 cut(s)	767, 870
AccII	CGCG	1 cut(s)	1322
AciI	CCGC	5 cut(s)	53, 56, 1598, 1869, 1973
AclWI	GGATC	5 cut(s)	86, 384, 804, 1201, 2018
AcoI	YGGCCR	1 cut(s)	663
AcsI	RAATTY	3 cut(s)	573, 990, 1238
AcyI	GRCGYC	3 cut(s)	270, 360, 764
AdeI	CACNNNGTG	1 cut(s)	661
AfaI	GTAC	4 cut(s)	5, 239, 1532, 1826
AfiI	CCNNNNNNNGG	4 cut(s)	55, 82, 741, 2007
AgsI	TTSAA	9 cut(s)	335, 415, 488, 524, 572, 689, 841, 1379, 1523
AhlI	ACTAGT	1 cut(s)	1846
AjnI	CCWGG	3 cut(s)	372, 543, 1129
Alw21I	GWGCWC	1 cut(s)	507
Alw26I	GTCTC	6 cut(s)	431, 591, 707, 732, 1355, 1580
AlwI	GGATC	5 cut(s)	86, 384, 804, 1201, 2018
AoxI	GGCC	2 cut(s)	663, 1873
ApeKI	GCWGC	4 cut(s)	784, 1601, 1921, 2021
ApoI	RAATTY	3 cut(s)	573, 990, 1238
Asp700I	GAANNNNTTC	2 cut(s)	283, 717
Asp718I	GGTACC	1 cut(s)	1824
AspLEI	GCGC	2 cut(s)	1324, 1745
AspS9I	GGNCC	1 cut(s)	1660
AsuC2I	CCSGG	3 cut(s)	50, 434, 1305
AsuHPI	GGTGA	5 cut(s)	97, 115, 1012, 1403, 1743
AsuII	TTCGAA	2 cut(s)	879, 1614
AvaII	GGWCC	1 cut(s)	1660
BalI	TGGCCA	1 cut(s)	665
BanI	GGYRCC	1 cut(s)	1824
BarI	GAAGNNNNNNTAC	2 cut(s)	1827, 1859
BbsI	GAAGAC	5 cut(s)	195, 273, 355, 495, 1557
Bbv12I	GWGCWC	1 cut(s)	507
BbvCI	CCTCAGC	1 cut(s)	1083
BbvI	GCAGC	4 cut(s)	796, 1613, 1933, 2033
BccI	CCATC	5 cut(s)	32, 76, 94, 209, 332
BceAI	ACGGC	1 cut(s)	1599
BcgI	CGANNNNNNTGC	2 cut(s)	299, 333
BciT130I	CCWGG	3 cut(s)	374, 545, 1131
BciVI	GTATCC	1 cut(s)	873
BcnI	CCSGG	3 cut(s)	50, 434, 1305
BcoDI	GTCTC	6 cut(s)	431, 591, 707, 732, 1355, 1580
BcuI	ACTAGT	1 cut(s)	1846
BfaI	CTAG	5 cut(s)	395, 476, 1472, 1847, 2043
BfmI	CTRYAG	4 cut(s)	513, 613, 1423, 1678
BfoI	RGCGCY	1 cut(s)	1746
BfuAI	ACCTGC	1 cut(s)	689
BfuI	GTATCC	1 cut(s)	873
BglII	AGATCT	1 cut(s)	603
BisI	GCNGC	7 cut(s)	54, 57, 785, 1599, 1602, 1922, 2022
BlpI	GCTNAGC	1 cut(s)	1839
BlsI	GCNGC	7 cut(s)	55, 58, 786, 1600, 1603, 1923, 2023
Bme1390I	CCNGG	6 cut(s)	50, 374, 434, 545, 1131, 1305
Bme18I	GGWCC	1 cut(s)	1660
BmgT120I	GGNCC	1 cut(s)	1660
BmiI	GGNNCC	2 cut(s)	1017, 1826
BmrFI	CCNGG	6 cut(s)	50, 374, 434, 545, 1131, 1305
BmrI	ACTGGG	1 cut(s)	718
BmsI	GCATC	4 cut(s)	96, 161, 1207, 1894
BmuI	ACTGGG	1 cut(s)	718
BpiI	GAAGAC	5 cut(s)	195, 273, 355, 495, 1557
BplI	GAGNNNNNCTC	2 cut(s)	1336, 1368
BpmI	CTGGAG	4 cut(s)	713, 1379, 1478, 1893
Bpu10I	CCTNAGC	2 cut(s)	1083, 1716
Bpu1102I	GCTNAGC	1 cut(s)	1839
Bpu14I	TTCGAA	2 cut(s)	879, 1614
BpuEI	CTTGAG	1 cut(s)	1487
BpuMI	CCSGG	3 cut(s)	50, 434, 1305
Bsa29I	ATCGAT	1 cut(s)	1026
BsaAI	YACGTR	1 cut(s)	964
BsaBI	GATNNNNATC	1 cut(s)	964
BsaHI	GRCGYC	3 cut(s)	270, 360, 764
BsaI	GGTCTC	1 cut(s)	707
BsaJI	CCNNGG	6 cut(s)	76, 95, 372, 641, 1210, 1334
BsaWI	WCCGGW	3 cut(s)	1056, 1154, 1195
BsaXI	ACNNNNNCTCC	2 cut(s)	840, 870
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 82, 741, 2007
Bse1I	ACTGG	4 cut(s)	713, 730, 866, 1362
Bse8I	GATNNNNATC	1 cut(s)	964
BseBI	CCWGG	3 cut(s)	374, 545, 1131
BseCI	ATCGAT	1 cut(s)	1026
BseDI	CCNNGG	6 cut(s)	76, 95, 372, 641, 1210, 1334
BseGI	GGATG	7 cut(s)	43, 87, 105, 145, 220, 1222, 1290
BseJI	GATNNNNATC	1 cut(s)	964
BseLI	CCNNNNNNNGG	4 cut(s)	55, 82, 741, 2007
BseMII	CTCAG	4 cut(s)	1023, 1074, 1553, 1830
BseNI	ACTGG	4 cut(s)	713, 730, 866, 1362
BseRI	GAGGAG	2 cut(s)	861, 1568
BseXI	GCAGC	4 cut(s)	796, 1613, 1933, 2033
BsgI	GTGCAG	2 cut(s)	638, 803
Bsh1236I	CGCG	1 cut(s)	1322
Bsh1285I	CGRYCG	1 cut(s)	901
BshFI	GGCC	2 cut(s)	665, 1875
BshNI	GGYRCC	1 cut(s)	1824
BshVI	ATCGAT	1 cut(s)	1026
BsiEI	CGRYCG	1 cut(s)	901
BsiHKAI	GWGCWC	1 cut(s)	507
BsiSI	CCGG	8 cut(s)	49, 434, 761, 938, 1057, 1155, 1196, 1305
BsiWI	CGTACG	1 cut(s)	237
BslFI	GGGAC	3 cut(s)	659, 836, 1526
BslI	CCNNNNNNNGG	4 cut(s)	55, 82, 741, 2007
BsmAI	GTCTC	6 cut(s)	431, 591, 707, 732, 1355, 1580
BsmBI	CGTCTC	1 cut(s)	732
BsmFI	GGGAC	3 cut(s)	659, 836, 1526
BsnI	GGCC	2 cut(s)	665, 1875
Bso31I	GGTCTC	1 cut(s)	707
Bsp119I	TTCGAA	2 cut(s)	879, 1614
Bsp1286I	GDGCHC	1 cut(s)	507
Bsp143I	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
Bsp1720I	GCTNAGC	1 cut(s)	1839
Bsp19I	CCATGG	1 cut(s)	1334
BspACI	CCGC	5 cut(s)	53, 56, 1598, 1869, 1973
BspANI	GGCC	2 cut(s)	665, 1875
BspCNI	CTCAG	4 cut(s)	1022, 1075, 1554, 1831
BspDI	ATCGAT	1 cut(s)	1026
BspFNI	CGCG	1 cut(s)	1322
BspLI	GGNNCC	2 cut(s)	1017, 1826
BspMAI	CTGCAG	2 cut(s)	617, 1682
BspMI	ACCTGC	1 cut(s)	689
BspPI	GGATC	5 cut(s)	86, 384, 804, 1201, 2018
BspT104I	TTCGAA	2 cut(s)	879, 1614
BspT107I	GGYRCC	1 cut(s)	1824
BspTNI	GGTCTC	1 cut(s)	707
BsrI	ACTGG	4 cut(s)	713, 730, 866, 1362
BssECI	CCNNGG	6 cut(s)	76, 95, 372, 641, 1210, 1334
BssMI	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
BssNI	GRCGYC	3 cut(s)	270, 360, 764
BssT1I	CCWWGG	3 cut(s)	76, 1210, 1334
Bst2UI	CCWGG	3 cut(s)	374, 545, 1131
Bst4CI	ACNGT	3 cut(s)	921, 1137, 1556
Bst6I	CTCTTC	1 cut(s)	1194
BstACI	GRCGYC	3 cut(s)	270, 360, 764
BstAPI	GCANNNNNTGC	1 cut(s)	254
BstBAI	YACGTR	1 cut(s)	964
BstBI	TTCGAA	2 cut(s)	879, 1614
BstC8I	GCNNGC	8 cut(s)	613, 905, 1345, 1430, 1464, 1606, 1708, 1873
BstDEI	CTNAG	6 cut(s)	1009, 1083, 1244, 1562, 1716, 1839
BstDSI	CCRYGG	1 cut(s)	1334
BstF5I	GGATG	7 cut(s)	43, 87, 105, 145, 220, 1222, 1290
BstFNI	CGCG	1 cut(s)	1322
BstH2I	RGCGCY	1 cut(s)	1746
BstHHI	GCGC	2 cut(s)	1324, 1745
BstKTI	GATC	9 cut(s)	94, 165, 225, 379, 606, 799, 901, 1209, 2013
BstMAI	GTCTC	6 cut(s)	431, 591, 707, 732, 1355, 1580
BstMBI	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
BstMCI	CGRYCG	1 cut(s)	901
BstMWI	GCNNNNNNNGC	7 cut(s)	128, 254, 348, 770, 1060, 1468, 1707
BstNI	CCWGG	3 cut(s)	374, 545, 1131
BstNSI	RCATGY	5 cut(s)	511, 811, 889, 1432, 2021
BstSCI	CCNGG	6 cut(s)	48, 372, 432, 543, 1129, 1303
BstSFI	CTRYAG	4 cut(s)	513, 613, 1423, 1678
BstSNI	TACGTA	1 cut(s)	964
BstUI	CGCG	1 cut(s)	1322
BstV1I	GCAGC	4 cut(s)	796, 1613, 1933, 2033
BstV2I	GAAGAC	5 cut(s)	195, 273, 355, 495, 1557
BstX2I	RGATCY	2 cut(s)	603, 1206
BstYI	RGATCY	2 cut(s)	603, 1206
Bsu15I	ATCGAT	1 cut(s)	1026
BsuI	GTATCC	1 cut(s)	873
BsuRI	GGCC	2 cut(s)	665, 1875
BsuTUI	ATCGAT	1 cut(s)	1026
BtgI	CCRYGG	1 cut(s)	1334
BtsCI	GGATG	7 cut(s)	43, 87, 105, 145, 220, 1222, 1290
BtsI	GCAGTG	2 cut(s)	671, 786
BtsIMutI	CAGTG	2 cut(s)	671, 786
BveI	ACCTGC	1 cut(s)	689
Cac8I	GCNNGC	8 cut(s)	613, 905, 1345, 1430, 1464, 1606, 1708, 1873
CfoI	GCGC	2 cut(s)	1324, 1745
Cfr13I	GGNCC	1 cut(s)	1660
ClaI	ATCGAT	1 cut(s)	1026
CseI	GACGC	1 cut(s)	753
Csp6I	GTAC	4 cut(s)	4, 238, 1531, 1825
CviQI	GTAC	4 cut(s)	4, 238, 1531, 1825
DdeI	CTNAG	6 cut(s)	1009, 1083, 1244, 1562, 1716, 1839
DpnI	GATC	9 cut(s)	93, 164, 224, 378, 605, 798, 900, 1208, 2012
DpnII	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
DraIII	CACNNNGTG	1 cut(s)	661
EaeI	YGGCCR	1 cut(s)	663
Eam1104I	CTCTTC	1 cut(s)	1194
EarI	CTCTTC	1 cut(s)	1194
Eco105I	TACGTA	1 cut(s)	964
Eco130I	CCWWGG	3 cut(s)	76, 1210, 1334
Eco31I	GGTCTC	1 cut(s)	707
Eco47I	GGWCC	1 cut(s)	1660
EcoO109I	RGGNCCY	1 cut(s)	1660
EcoRII	CCWGG	3 cut(s)	372, 543, 1129
EcoT14I	CCWWGG	3 cut(s)	76, 1210, 1334
ErhI	CCWWGG	3 cut(s)	76, 1210, 1334
Esp3I	CGTCTC	1 cut(s)	732
FalI	AAGNNNNNCTT	2 cut(s)	347, 379
FaqI	GGGAC	3 cut(s)	659, 836, 1526
FblI	GTMKAC	2 cut(s)	767, 870
Fnu4HI	GCNGC	7 cut(s)	54, 57, 785, 1599, 1602, 1922, 2022
FokI	GGATG	7 cut(s)	50, 94, 112, 152, 227, 1229, 1297
Fsp4HI	GCNGC	7 cut(s)	54, 57, 785, 1599, 1602, 1922, 2022
FspBI	CTAG	5 cut(s)	395, 476, 1472, 1847, 2043
GlaI	GCGC	2 cut(s)	1323, 1744
GluI	GCNGC	7 cut(s)	54, 57, 785, 1599, 1602, 1922, 2022
GsuI	CTGGAG	4 cut(s)	713, 1379, 1478, 1893
HaeII	RGCGCY	1 cut(s)	1746
HaeIII	GGCC	2 cut(s)	665, 1875
HapII	CCGG	8 cut(s)	49, 434, 761, 938, 1057, 1155, 1196, 1305
HgaI	GACGC	1 cut(s)	753
HhaI	GCGC	2 cut(s)	1324, 1745
Hin1I	GRCGYC	3 cut(s)	270, 360, 764
Hin6I	GCGC	2 cut(s)	1322, 1743
HinP1I	GCGC	2 cut(s)	1322, 1743
HincII	GTYRAC	2 cut(s)	871, 1996
HindII	GTYRAC	2 cut(s)	871, 1996
HindIII	AAGCTT	3 cut(s)	716, 1257, 1780
HinfI	GANTC	8 cut(s)	182, 381, 424, 584, 849, 1417, 1573, 1767
HpaII	CCGG	8 cut(s)	49, 434, 761, 938, 1057, 1155, 1196, 1305
HphI	GGTGA	5 cut(s)	97, 115, 1012, 1403, 1743
Hpy166II	GTNNAC	6 cut(s)	181, 768, 832, 871, 1559, 1996
Hpy188I	TCNGA	7 cut(s)	96, 558, 723, 1012, 1049, 1903, 2057
Hpy188III	TCNNGA	8 cut(s)	578, 704, 735, 822, 924, 1019, 1457, 1910
Hpy8I	GTNNAC	6 cut(s)	181, 768, 832, 871, 1559, 1996
HpyAV	CCTTC	3 cut(s)	309, 546, 683
HpyCH4III	ACNGT	3 cut(s)	921, 1137, 1556
HpyCH4IV	ACGT	4 cut(s)	270, 360, 963, 1437
HpyF10VI	GCNNNNNNNGC	7 cut(s)	128, 254, 348, 770, 1060, 1468, 1707
HpyF3I	CTNAG	6 cut(s)	1009, 1083, 1244, 1562, 1716, 1839
HpySE526I	ACGT	4 cut(s)	270, 360, 963, 1437
Hsp92I	GRCGYC	3 cut(s)	270, 360, 764
HspAI	GCGC	2 cut(s)	1322, 1743
KpnI	GGTACC	1 cut(s)	1828
Kzo9I	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
LmnI	GCTCC	5 cut(s)	502, 558, 1059, 1459, 1912
Lsp1109I	GCAGC	4 cut(s)	796, 1613, 1933, 2033
LweI	GCATC	4 cut(s)	96, 161, 1207, 1894
MaeI	CTAG	5 cut(s)	395, 476, 1472, 1847, 2043
MaeII	ACGT	4 cut(s)	270, 360, 963, 1437
MaeIII	GTNAC	5 cut(s)	18, 526, 1150, 1316, 1733
MalI	GATC	9 cut(s)	93, 164, 224, 378, 605, 798, 900, 1208, 2012
MboI	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
MfeI	CAATTG	2 cut(s)	1483, 2025
MflI	RGATCY	2 cut(s)	603, 1206
MhlI	GDGCHC	1 cut(s)	507
MlsI	TGGCCA	1 cut(s)	665
MluCI	AATT	9 cut(s)	483, 573, 990, 1238, 1290, 1483, 1690, 2025, 2034
MluNI	TGGCCA	1 cut(s)	665
MlyI	GAGTC	6 cut(s)	176, 433, 593, 858, 1411, 1582
Mox20I	TGGCCA	1 cut(s)	665
MroXI	GAANNNNTTC	2 cut(s)	283, 717
MscI	TGGCCA	1 cut(s)	665
MseI	TTAA	5 cut(s)	111, 563, 945, 1101, 1293
MslI	CAYNNNNRTG	1 cut(s)	1037
Msp20I	TGGCCA	1 cut(s)	665
MspA1I	CMGCKG	1 cut(s)	1871
MspI	CCGG	8 cut(s)	49, 434, 761, 938, 1057, 1155, 1196, 1305
MspR9I	CCNGG	6 cut(s)	50, 374, 434, 545, 1131, 1305
MunI	CAATTG	2 cut(s)	1483, 2025
MvaI	CCWGG	3 cut(s)	374, 545, 1131
MvnI	CGCG	1 cut(s)	1322
MwoI	GCNNNNNNNGC	7 cut(s)	128, 254, 348, 770, 1060, 1468, 1707
NciI	CCSGG	3 cut(s)	50, 434, 1305
NcoI	CCATGG	1 cut(s)	1334
NdeII	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
NlaIV	GGNNCC	2 cut(s)	1017, 1826
NmuCI	GTSAC	3 cut(s)	18, 526, 1150
NspI	RCATGY	5 cut(s)	511, 811, 889, 1432, 2021
NspV	TTCGAA	2 cut(s)	879, 1614
PaeI	GCATGC	1 cut(s)	1432
PcsI	WCGNNNNNNNCGW	1 cut(s)	876
PdmI	GAANNNNTTC	2 cut(s)	283, 717
PfeI	GAWTC	2 cut(s)	381, 1767
Pfl23II	CGTACG	1 cut(s)	237
PflFI	GACNNNGTC	1 cut(s)	185
PfoI	TCCNGGA	2 cut(s)	543, 1129
PkrI	GCNGC	7 cut(s)	55, 58, 786, 1600, 1603, 1923, 2023
Ple19I	CGATCG	1 cut(s)	901
PleI	GAGTC	6 cut(s)	176, 432, 592, 857, 1411, 1581
PpsI	GAGTC	6 cut(s)	176, 432, 592, 857, 1411, 1581
Ppu21I	YACGTR	1 cut(s)	964
PpuMI	RGGWCCY	1 cut(s)	1660
Psp5II	RGGWCCY	1 cut(s)	1660
Psp6I	CCWGG	3 cut(s)	372, 543, 1129
PspGI	CCWGG	3 cut(s)	372, 543, 1129
PspLI	CGTACG	1 cut(s)	237
PspN4I	GGNNCC	2 cut(s)	1017, 1826
PspPI	GGNCC	1 cut(s)	1660
PspPPI	RGGWCCY	1 cut(s)	1660
PstI	CTGCAG	2 cut(s)	617, 1682
PsuI	RGATCY	2 cut(s)	603, 1206
PsyI	GACNNNGTC	1 cut(s)	185
PvuI	CGATCG	1 cut(s)	901
RsaI	GTAC	4 cut(s)	5, 239, 1532, 1826
RsaNI	GTAC	4 cut(s)	4, 238, 1531, 1825
RseI	CAYNNNNRTG	1 cut(s)	1037
SalI	GTCGAC	1 cut(s)	869
SaqAI	TTAA	5 cut(s)	111, 563, 945, 1101, 1293
SatI	GCNGC	7 cut(s)	54, 57, 785, 1599, 1602, 1922, 2022
Sau3AI	GATC	9 cut(s)	91, 162, 222, 376, 603, 796, 898, 1206, 2010
Sau96I	GGNCC	1 cut(s)	1660
SchI	GAGTC	6 cut(s)	176, 433, 593, 858, 1411, 1582
ScrFI	CCNGG	6 cut(s)	50, 374, 434, 545, 1131, 1305
SduI	GDGCHC	1 cut(s)	507
SfaNI	GCATC	4 cut(s)	96, 161, 1207, 1894
SfcI	CTRYAG	4 cut(s)	513, 613, 1423, 1678
SfuI	TTCGAA	2 cut(s)	879, 1614
SinI	GGWCC	1 cut(s)	1660
SmiMI	CAYNNNNRTG	1 cut(s)	1037
SmlI	CTYRAG	1 cut(s)	1502
SmoI	CTYRAG	1 cut(s)	1502
SnaBI	TACGTA	1 cut(s)	964
SpeI	ACTAGT	1 cut(s)	1846
SphI	GCATGC	1 cut(s)	1432
Sse9I	AATT	9 cut(s)	483, 573, 990, 1238, 1290, 1483, 1690, 2025, 2034
SsiI	CCGC	5 cut(s)	53, 56, 1598, 1869, 1973
SspMI	CTAG	5 cut(s)	395, 476, 1472, 1847, 2043
StyD4I	CCNGG	6 cut(s)	48, 372, 432, 543, 1129, 1303
StyI	CCWWGG	3 cut(s)	76, 1210, 1334
TaaI	ACNGT	3 cut(s)	921, 1137, 1556
TaiI	ACGT	4 cut(s)	273, 363, 966, 1440
TasI	AATT	9 cut(s)	483, 573, 990, 1238, 1290, 1483, 1690, 2025, 2034
TauI	GCSGC	3 cut(s)	56, 59, 1601
TfiI	GAWTC	2 cut(s)	381, 1767
Tru1I	TTAA	5 cut(s)	111, 563, 945, 1101, 1293
Tru9I	TTAA	5 cut(s)	111, 563, 945, 1101, 1293
TscAI	CASTG	2 cut(s)	678, 786
TseFI	GTSAC	3 cut(s)	18, 526, 1150
TseI	GCWGC	4 cut(s)	784, 1601, 1921, 2021
Tsp45I	GTSAC	3 cut(s)	18, 526, 1150
TspDTI	ATGAA	2 cut(s)	1815, 1848
TspGWI	ACGGA	3 cut(s)	175, 995, 1670
TspRI	CASTG	2 cut(s)	678, 786
Tth111I	GACNNNGTC	1 cut(s)	185
VpaK11BI	GGWCC	1 cut(s)	1660
XapI	RAATTY	3 cut(s)	573, 990, 1238
XceI	RCATGY	5 cut(s)	511, 811, 889, 1432, 2021
XcmI	CCANNNNNNNNNTGG	2 cut(s)	335, 839
XmiI	GTMKAC	2 cut(s)	767, 870
XmnI	GAANNNNTTC	2 cut(s)	283, 717
XspI	CTAG	5 cut(s)	395, 476, 1472, 1847, 2043
ZraI	GACGTC	2 cut(s)	271, 361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.