Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003437

Physical Location & Seq

Genomic Coordinates Reverse (-)

52294142 .. 52304028

Gene Structure 9887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G028340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGGCAAGTGGGCTGTGGGGCCCTCTCCTTTCTTTTCCTTCTTCTTCTTCTGCTGGGCACCGTTCCCTCCTTTCTTTTCTTCTTTCTCTTTCTTCTTCTTTTTCTTCTTCTCGGCAAACCAAATGCGCATCTATCATCGAAAAAGAAAAAAAAAAACAAATGAGGATCCAAAGCAGCAAACCAAAATGCCAAGAATATTATGCACCCTTGTTGCATAAGATTGTGAAAGATGATACACAACAAAATGAAGAAACTCCTCCTACCAAGGATGACAACTCTGCATCGACCCAGATCATCAAGGAACTTGTGGACTCCGTCAAGTCCATGCTGTCTTCTATGGAGGATGGGGAGATCAGCATATCAGCGTACGATACAGCATGGGTTGCTTTGGTCGAAGACGTCAATGGAACTTGTTCGCCTCATTTCCCTTCCAGCCTCGAATGGATTGCCAACAACCAGCTTGAAGATGGCTCTTGGGGCTACAAGGACGTCTTCTCTGCCCACGATCGAATCATCAGCACCCTAGCCTGTGTTGTTGCGTTGAAATCGTGGAGTCTCCACCCGGATAAATGCGACAAAGGAATGAGGTTTTTCAGGGAAAACCTAGACAAAATTGAAGACGAGAATAGTGAGCACATGCCTATAGGGTTTGAAGTTGCATTCCCTTCTGTCCTGGAAATAGCTCGGAGCTTAAACCTTGAAGTTCCTGATGAGTCTCCTGTGTTGCATGAGATCTATGCCTGCAGAAACCTGAAACTCTCAAAGATACCGAGGGACATACTGCACAATGTGGCCACATCACTGCTTTATAGCCTAGAAGGAATGGCAGGTCTTGACTGGGAAAAGCTTCTGAAACTCCAGTCCAGAGACGGGTCGTTTCTCTTTTCTCCGGCGTCTACTGCCTACGCATTGCAGCAGACAAAGGATCAAAACTGCATGTCGTATCTGTCAAGAATAGTCCACAAGTTCAATGGAGGAGTCCCTGGTGTGTATCCAGTCGACTTGTTCGAACGCATGTGGGCTGTCGATCGCTTGCAGAGGTTAGGACTGTCCAGATACTTCGAGCCGGAGATTAAGGAGTGTGTTAGATACGTATCAAGGTATTGGACGGACAAAGGAATTTCTTGGGTGAGAAACTCAGAAGTTCCAGACATCGATGACTCATCAATGGGGTTCAGACTGCTCCGGTTGCATGGGCATAAGGTGTCGGCTGAGGTTTATGAGTATTTTAAGAAAGGAAGTGAGTTCTTCTGCTATCCTGGACAGTCGAGCCAAGCTGTGACCGGAATATACAACTTATATAGGGCAAGTCAGTTGGCATTACCGGAAGAGAAGATCCTTGGGGATGCTAAAGAGTTTGCTACTAAATTCCTTAGAGAGAAACAAGCTTCTAATGAGCTTTTGGACAAATGGATGATAATTAAGGACTTACCTGGAGAGGTGGGTTTCGCGCTGGATTTTCCATGGTATGCGAGCTTACCTCGACTGGAGACTATATTTTACATTGAACAATATGGTGGTGAAGATGATGTTTGGATTGGCAAGACTCTCTACAGCATGCCCTACATTAGCAATAATGTGTATCTGGAGCTGGCAAAGCTAGACTACAACAATTGCCAAGCATTACATCTCAAGGAATGGGACAACATTCAAAAGTGGTACAAAGAATGGAAACTCGAAGACTATGGACTGAGTGAAAAGAGTCTCCTCACGGCTTATTTTGTTGTGGCAGCGAGCATTTTCGAACCCGAAAGAGCTAATGAGCGACTTGCATGGGCTAAAACGGTATGCCTAGGGGTGGGCGTCCGGACCCGAAAAACCCGAAAACCGACCCGAACCGACCCAAAAAGCCCGAATCGGAGGTCCTCCACAAACAAGACTGCAGGGCAAGGAATTGTTGGGGCTTTGTTGGCAACCCTAAGCCAACTCTCATCGATTACAATGGCGCTACATCACCAAGACATTACCGAATCTCTAAGTCAAGCTTGGGAAAAGTGGCTACTGAAGTGGCAAGAGAAAGGGGAGAGGTACCGAGATGAAGCTGAGTTACTAGTGGAAACAATAAATCAAACCGCTGGCCTTTCACTTCGGCAAAAGTCGTTGTCCGCTGCTCCAGAATATGAGCAGCTTTTCGGCCTAACTAACAAAGTTTGCAATCAACTTCGTTATTGCGAAAACCAAAAGAACAAGGTAAATGGCAACTGCAGAACCAAAATCAACATGACAACCCCAGAAATAGAATCATACATGCAGCAATTGGTGGAATTGGTGCTAGAAAAATCTTCCGATGACGAATCCTTGATTAAGCAAAGTTTTTTTACCGTAGCGAGGAGTTTTTACTATTCGACCTGCTGCGACCCTGAAGTCATTAGCCACCACATTAACAAAGTACTCTTTCAGCGAGCAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009536 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009905 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016853 GO:0016872 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

803

Amino Acids

91.63

Weight (kDa)

6.06

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	279 - 485	2.1e-41	Terpene synthase, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Tree File

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Orthologous Genes (Group: OG0003437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02780
fragaria_vesca	FvH4_2g23400 FvH4_2g23400 FvH4_2g23400 FvH4_2g23420 FvH4_2g23440 FvH4_2g23440 FvH4_2g23440
malus_domestica	MD03G1263500.v1.1 MD11G1208700.v1.1 MD11G1284300.v1.1
prunus_persica	Prupe.8G239900_v2.0.a1
pyrus_communis	pycom11g25170
rosa_chinensis	RchiOBHm_Chr6g0290871 RchiOBHm_Chr6g0290941
rosa_laevigata	RLG00000012165
rosa_multiflora	Rmu_sc0001577.1_g000003
rosa_roxburghii	Rroxscaffold_7G00176530 Rroxscaffold_7G00176670
rosa_rugosa	Rorug06G0215400 Rorug06G0215500 Rorug06G0215600 Rorug06G0215700 Rorug06G0215900 Rorug06G0216000 Rorug06G0216000
rosa_samantha	Rh6AG325900 Rh6AG326200 Rh6BG333600 Rh6BG333800 Rh6CG339300 Rh6CG339700 Rh6DG326600 Rh6DG327100
rosa_wichuraiana	Rw6G028340 Rw6G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2363
AatII	GACGTC	2 cut(s)	402, 492
Acc16I	TGCGCA	1 cut(s)	127
Acc36I	ACCTGC	2 cut(s)	818, 2357
Acc65I	GGTACC	1 cut(s)	2028
AccB1I	GGYRCC	2 cut(s)	57, 2028
AccI	GTMKAC	2 cut(s)	896, 999
AccII	CGCG	1 cut(s)	1451
AccIII	TCCGGA	1 cut(s)	1806
AciI	CCGC	2 cut(s)	2073, 2106
AclWI	GGATC	4 cut(s)	160, 173, 933, 1330
AcoI	YGGCCR	1 cut(s)	792
AcsI	RAATTY	2 cut(s)	1119, 1367
AcuI	CTGAAG	2 cut(s)	2024, 2382
AcyI	GRCGYC	4 cut(s)	399, 489, 893, 1803
AdeI	CACNNNGTG	1 cut(s)	790
AfaI	GTAC	4 cut(s)	368, 1661, 2030, 2391
AfiI	CCNNNNNNNGG	3 cut(s)	870, 1798, 2328
AgsI	TTSAA	8 cut(s)	464, 544, 617, 653, 701, 970, 1508, 1652
AhlI	ACTAGT	1 cut(s)	2050
AjnI	CCWGG	4 cut(s)	672, 982, 1258, 1432
Alw21I	GWGCWC	1 cut(s)	636
Alw26I	GTCTC	5 cut(s)	560, 720, 861, 1484, 1709
AlwI	GGATC	4 cut(s)	160, 173, 933, 1330
Aor13HI	TCCGGA	1 cut(s)	1806
AoxI	GGCC	4 cut(s)	19, 792, 2077, 2134
ApaI	GGGCCC	1 cut(s)	23
ApeKI	GCWGC	7 cut(s)	174, 913, 1730, 2108, 2125, 2251, 2352
ApoI	RAATTY	2 cut(s)	1119, 1367
ArsI	GACNNNNNNTTYG	2 cut(s)	1847, 1879
Asp700I	GAANNNNTTC	2 cut(s)	412, 846
Asp718I	GGTACC	1 cut(s)	2028
AspA2I	CCTAGG	1 cut(s)	1792
AspLEI	GCGC	3 cut(s)	128, 1453, 1948
AspS9I	GGNCC	4 cut(s)	19, 20, 1809, 1863
AsuC2I	CCSGG	1 cut(s)	563
AsuHPI	GGTGA	3 cut(s)	1141, 1532, 1946
AsuII	TTCGAA	2 cut(s)	1008, 1743
AvaII	GGWCC	2 cut(s)	1809, 1863
AvrII	CCTAGG	1 cut(s)	1792
BaeGI	GKGCMC	2 cut(s)	23, 60
BalI	TGGCCA	1 cut(s)	794
BamHI	GGATCC	1 cut(s)	165
BanI	GGYRCC	2 cut(s)	57, 2028
BanII	GRGCYC	1 cut(s)	23
BarI	GAAGNNNNNNTAC	2 cut(s)	2031, 2063
BbsI	GAAGAC	5 cut(s)	324, 402, 484, 624, 1686
Bbv12I	GWGCWC	1 cut(s)	636
BbvCI	CCTCAGC	1 cut(s)	1212
BbvI	GCAGC	7 cut(s)	186, 925, 1742, 2095, 2137, 2263, 2339
BccI	CCATC	2 cut(s)	338, 461
BceAI	ACGGC	1 cut(s)	1728
BcgI	CGANNNNNNTGC	2 cut(s)	428, 462
BciT130I	CCWGG	4 cut(s)	674, 984, 1260, 1434
BciVI	GTATCC	1 cut(s)	1002
BcnI	CCSGG	1 cut(s)	563
BcoDI	GTCTC	5 cut(s)	560, 720, 861, 1484, 1709
BcuI	ACTAGT	1 cut(s)	2050
BfaI	CTAG	7 cut(s)	524, 605, 815, 1601, 1793, 2051, 2273
BfmI	CTRYAG	5 cut(s)	642, 742, 1552, 1881, 2203
BfoI	RGCGCY	1 cut(s)	1949
BfuAI	ACCTGC	2 cut(s)	818, 2357
BfuI	GTATCC	1 cut(s)	1002
BglII	AGATCT	1 cut(s)	732
BisI	GCNGC	7 cut(s)	175, 914, 1731, 2109, 2126, 2252, 2353
BlnI	CCTAGG	1 cut(s)	1792
BlsI	GCNGC	7 cut(s)	176, 915, 1732, 2110, 2127, 2253, 2354
BmcAI	AGTACT	1 cut(s)	2391
Bme1390I	CCNGG	5 cut(s)	563, 674, 984, 1260, 1434
Bme18I	GGWCC	2 cut(s)	1809, 1863
BmgT120I	GGNCC	4 cut(s)	19, 20, 1809, 1863
BmiI	GGNNCC	6 cut(s)	20, 21, 59, 167, 1811, 2030
BmrFI	CCNGG	5 cut(s)	563, 674, 984, 1260, 1434
BmrI	ACTGGG	1 cut(s)	847
BmsI	GCATC	3 cut(s)	137, 290, 1336
BmuI	ACTGGG	1 cut(s)	847
BpiI	GAAGAC	5 cut(s)	324, 402, 484, 624, 1686
BplI	GAGNNNNNCTC	2 cut(s)	1465, 1497
BpmI	CTGGAG	5 cut(s)	842, 1455, 1508, 1607, 2097
Bpu10I	CCTNAGC	2 cut(s)	1212, 1919
Bpu14I	TTCGAA	2 cut(s)	1008, 1743
BpuEI	CTTGAG	1 cut(s)	1616
BpuMI	CCSGG	1 cut(s)	563
Bsa29I	ATCGAT	2 cut(s)	1155, 1934
BsaAI	YACGTR	1 cut(s)	1093
BsaBI	GATNNNNATC	1 cut(s)	1093
BsaHI	GRCGYC	4 cut(s)	399, 489, 893, 1803
BsaJI	CCNNGG	6 cut(s)	264, 770, 982, 1339, 1463, 1792
BsaWI	WCCGGW	4 cut(s)	1185, 1283, 1324, 1806
Bsc4I	CCNNNNNNNGG	3 cut(s)	870, 1798, 2328
Bse1I	ACTGG	4 cut(s)	842, 859, 995, 1491
Bse3DI	GCAATG	1 cut(s)	908
Bse8I	GATNNNNATC	1 cut(s)	1093
BseAI	TCCGGA	1 cut(s)	1806
BseBI	CCWGG	4 cut(s)	674, 984, 1260, 1434
BseCI	ATCGAT	2 cut(s)	1155, 1934
BseDI	CCNNGG	6 cut(s)	264, 770, 982, 1339, 1463, 1792
BseGI	GGATG	4 cut(s)	274, 349, 1351, 1419
BseJI	GATNNNNATC	1 cut(s)	1093
BseLI	CCNNNNNNNGG	3 cut(s)	870, 1798, 2328
BseMI	GCAATG	1 cut(s)	908
BseMII	CTCAG	4 cut(s)	1152, 1203, 1682, 2034
BseNI	ACTGG	4 cut(s)	842, 859, 995, 1491
BseRI	GAGGAG	4 cut(s)	246, 990, 1697, 2344
BseSI	GKGCMC	2 cut(s)	23, 60
BseXI	GCAGC	7 cut(s)	186, 925, 1742, 2095, 2137, 2263, 2339
BseYI	CCCAGC	1 cut(s)	53
BsgI	GTGCAG	1 cut(s)	767
Bsh1236I	CGCG	1 cut(s)	1451
Bsh1285I	CGRYCG	2 cut(s)	508, 1030
BshFI	GGCC	4 cut(s)	21, 794, 2079, 2136
BshNI	GGYRCC	2 cut(s)	57, 2028
BshVI	ATCGAT	2 cut(s)	1155, 1934
BsiEI	CGRYCG	2 cut(s)	508, 1030
BsiHKAI	GWGCWC	1 cut(s)	636
BsiSI	CCGG	7 cut(s)	563, 890, 1067, 1186, 1284, 1325, 1807
BsiWI	CGTACG	1 cut(s)	366
BslFI	GGGAC	3 cut(s)	788, 965, 1655
BslI	CCNNNNNNNGG	3 cut(s)	870, 1798, 2328
BsmAI	GTCTC	5 cut(s)	560, 720, 861, 1484, 1709
BsmBI	CGTCTC	1 cut(s)	861
BsmFI	GGGAC	3 cut(s)	788, 965, 1655
BsmI	GAATGC	1 cut(s)	659
BsnI	GGCC	4 cut(s)	21, 794, 2079, 2136
Bsp119I	TTCGAA	2 cut(s)	1008, 1743
Bsp120I	GGGCCC	1 cut(s)	19
Bsp1286I	GDGCHC	3 cut(s)	23, 60, 636
Bsp13I	TCCGGA	1 cut(s)	1806
Bsp143I	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
Bsp19I	CCATGG	1 cut(s)	1463
BspACI	CCGC	2 cut(s)	2073, 2106
BspANI	GGCC	4 cut(s)	21, 794, 2079, 2136
BspCNI	CTCAG	4 cut(s)	1151, 1204, 1683, 2035
BspDI	ATCGAT	2 cut(s)	1155, 1934
BspEI	TCCGGA	1 cut(s)	1806
BspFNI	CGCG	1 cut(s)	1451
BspLI	GGNNCC	6 cut(s)	20, 21, 59, 167, 1811, 2030
BspMAI	CTGCAG	3 cut(s)	746, 1885, 2207
BspMI	ACCTGC	2 cut(s)	818, 2357
BspPI	GGATC	4 cut(s)	160, 173, 933, 1330
BspT104I	TTCGAA	2 cut(s)	1008, 1743
BspT107I	GGYRCC	2 cut(s)	57, 2028
BsrDI	GCAATG	1 cut(s)	908
BsrI	ACTGG	4 cut(s)	842, 859, 995, 1491
BssECI	CCNNGG	6 cut(s)	264, 770, 982, 1339, 1463, 1792
BssMI	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
BssNI	GRCGYC	4 cut(s)	399, 489, 893, 1803
BssT1I	CCWWGG	4 cut(s)	264, 1339, 1463, 1792
Bst2UI	CCWGG	4 cut(s)	674, 984, 1260, 1434
Bst4CI	ACNGT	5 cut(s)	62, 1050, 1266, 1786, 2323
Bst6I	CTCTTC	1 cut(s)	1323
BstACI	GRCGYC	4 cut(s)	399, 489, 893, 1803
BstAPI	GCANNNNNTGC	1 cut(s)	383
BstBAI	YACGTR	1 cut(s)	1093
BstBI	TTCGAA	2 cut(s)	1008, 1743
BstC8I	GCNNGC	8 cut(s)	742, 1034, 1474, 1559, 1593, 1735, 2077, 2403
BstDEI	CTNAG	7 cut(s)	1138, 1212, 1373, 1691, 1919, 1976, 2043
BstDSI	CCRYGG	1 cut(s)	1463
BstF5I	GGATG	4 cut(s)	274, 349, 1351, 1419
BstFNI	CGCG	1 cut(s)	1451
BstH2I	RGCGCY	1 cut(s)	1949
BstHHI	GCGC	3 cut(s)	128, 1453, 1948
BstKTI	GATC	8 cut(s)	168, 294, 354, 508, 735, 928, 1030, 1338
BstMAI	GTCTC	5 cut(s)	560, 720, 861, 1484, 1709
BstMBI	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
BstMCI	CGRYCG	2 cut(s)	508, 1030
BstMWI	GCNNNNNNNGC	6 cut(s)	383, 477, 899, 1189, 1597, 1910
BstNI	CCWGG	4 cut(s)	674, 984, 1260, 1434
BstNSI	RCATGY	5 cut(s)	640, 940, 1018, 1561, 2251
BstSCI	CCNGG	5 cut(s)	561, 672, 982, 1258, 1432
BstSFI	CTRYAG	5 cut(s)	642, 742, 1552, 1881, 2203
BstSLI	GKGCMC	2 cut(s)	23, 60
BstSNI	TACGTA	1 cut(s)	1093
BstUI	CGCG	1 cut(s)	1451
BstV1I	GCAGC	7 cut(s)	186, 925, 1742, 2095, 2137, 2263, 2339
BstV2I	GAAGAC	5 cut(s)	324, 402, 484, 624, 1686
BstX2I	RGATCY	3 cut(s)	165, 732, 1335
BstYI	RGATCY	3 cut(s)	165, 732, 1335
Bsu15I	ATCGAT	2 cut(s)	1155, 1934
BsuI	GTATCC	1 cut(s)	1002
BsuRI	GGCC	4 cut(s)	21, 794, 2079, 2136
BsuTUI	ATCGAT	2 cut(s)	1155, 1934
BtgI	CCRYGG	1 cut(s)	1463
BtsCI	GGATG	4 cut(s)	274, 349, 1351, 1419
BtsI	GCAGTG	1 cut(s)	800
BtsIMutI	CAGTG	1 cut(s)	800
BveI	ACCTGC	2 cut(s)	818, 2357
Cac8I	GCNNGC	8 cut(s)	742, 1034, 1474, 1559, 1593, 1735, 2077, 2403
CfoI	GCGC	3 cut(s)	128, 1453, 1948
Cfr13I	GGNCC	4 cut(s)	19, 20, 1809, 1863
ClaI	ATCGAT	2 cut(s)	1155, 1934
CseI	GACGC	2 cut(s)	882, 1792
Csp6I	GTAC	4 cut(s)	367, 1660, 2029, 2390
CviQI	GTAC	4 cut(s)	367, 1660, 2029, 2390
DdeI	CTNAG	7 cut(s)	1138, 1212, 1373, 1691, 1919, 1976, 2043
DpnI	GATC	8 cut(s)	167, 293, 353, 507, 734, 927, 1029, 1337
DpnII	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
DraIII	CACNNNGTG	1 cut(s)	790
DrdI	GACNNNNNNGTC	1 cut(s)	2363
DseDI	GACNNNNNNGTC	1 cut(s)	2363
EaeI	YGGCCR	1 cut(s)	792
Eam1104I	CTCTTC	1 cut(s)	1323
EarI	CTCTTC	1 cut(s)	1323
Eco105I	TACGTA	1 cut(s)	1093
Eco130I	CCWWGG	4 cut(s)	264, 1339, 1463, 1792
Eco24I	GRGCYC	1 cut(s)	23
Eco47I	GGWCC	2 cut(s)	1809, 1863
Eco57I	CTGAAG	2 cut(s)	2024, 2382
EcoO109I	RGGNCCY	3 cut(s)	19, 20, 1863
EcoRII	CCWGG	4 cut(s)	672, 982, 1258, 1432
EcoT14I	CCWWGG	4 cut(s)	264, 1339, 1463, 1792
EcoT38I	GRGCYC	1 cut(s)	23
ErhI	CCWWGG	4 cut(s)	264, 1339, 1463, 1792
Esp3I	CGTCTC	1 cut(s)	861
FalI	AAGNNNNNCTT	4 cut(s)	476, 508, 1969, 2001
FaqI	GGGAC	3 cut(s)	788, 965, 1655
FblI	GTMKAC	2 cut(s)	896, 999
Fnu4HI	GCNGC	7 cut(s)	175, 914, 1731, 2109, 2126, 2252, 2353
FokI	GGATG	4 cut(s)	281, 356, 1358, 1426
FriOI	GRGCYC	1 cut(s)	23
Fsp4HI	GCNGC	7 cut(s)	175, 914, 1731, 2109, 2126, 2252, 2353
FspAI	RTGCGCAY	1 cut(s)	127
FspBI	CTAG	7 cut(s)	524, 605, 815, 1601, 1793, 2051, 2273
FspI	TGCGCA	1 cut(s)	127
GlaI	GCGC	3 cut(s)	127, 1452, 1947
GluI	GCNGC	7 cut(s)	175, 914, 1731, 2109, 2126, 2252, 2353
GsaI	CCCAGC	1 cut(s)	57
GsuI	CTGGAG	5 cut(s)	842, 1455, 1508, 1607, 2097
HaeII	RGCGCY	1 cut(s)	1949
HaeIII	GGCC	4 cut(s)	21, 794, 2079, 2136
HapII	CCGG	7 cut(s)	563, 890, 1067, 1186, 1284, 1325, 1807
HgaI	GACGC	2 cut(s)	882, 1792
HhaI	GCGC	3 cut(s)	128, 1453, 1948
Hin1I	GRCGYC	4 cut(s)	399, 489, 893, 1803
Hin6I	GCGC	3 cut(s)	126, 1451, 1946
HinP1I	GCGC	3 cut(s)	126, 1451, 1946
HincII	GTYRAC	1 cut(s)	1000
HindII	GTYRAC	1 cut(s)	1000
HindIII	AAGCTT	3 cut(s)	845, 1386, 1983
HpaII	CCGG	7 cut(s)	563, 890, 1067, 1186, 1284, 1325, 1807
HphI	GGTGA	3 cut(s)	1141, 1532, 1946
Hpy166II	GTNNAC	4 cut(s)	310, 897, 961, 1000
Hpy188I	TCNGA	6 cut(s)	687, 852, 1141, 1178, 1860, 2287
Hpy188III	TCNNGA	9 cut(s)	707, 833, 864, 951, 1053, 1148, 1586, 1807, 2114
Hpy8I	GTNNAC	4 cut(s)	310, 897, 961, 1000
HpyAV	CCTTC	4 cut(s)	48, 438, 675, 812
HpyCH4III	ACNGT	5 cut(s)	62, 1050, 1266, 1786, 2323
HpyCH4IV	ACGT	3 cut(s)	399, 489, 1092
HpyF10VI	GCNNNNNNNGC	6 cut(s)	383, 477, 899, 1189, 1597, 1910
HpyF3I	CTNAG	7 cut(s)	1138, 1212, 1373, 1691, 1919, 1976, 2043
HpySE526I	ACGT	3 cut(s)	399, 489, 1092
Hsp92I	GRCGYC	4 cut(s)	399, 489, 893, 1803
HspAI	GCGC	3 cut(s)	126, 1451, 1946
Kpn2I	TCCGGA	1 cut(s)	1806
KpnI	GGTACC	1 cut(s)	2032
Kzo9I	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
LmnI	GCTCC	4 cut(s)	687, 1188, 1588, 2116
Lsp1109I	GCAGC	7 cut(s)	186, 925, 1742, 2095, 2137, 2263, 2339
LweI	GCATC	3 cut(s)	137, 290, 1336
MaeI	CTAG	7 cut(s)	524, 605, 815, 1601, 1793, 2051, 2273
MaeII	ACGT	3 cut(s)	399, 489, 1092
MaeIII	GTNAC	2 cut(s)	1279, 2046
MalI	GATC	8 cut(s)	167, 293, 353, 507, 734, 927, 1029, 1337
MboI	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
MfeI	CAATTG	2 cut(s)	1612, 2255
MflI	RGATCY	3 cut(s)	165, 732, 1335
MhlI	GDGCHC	3 cut(s)	23, 60, 636
MlsI	TGGCCA	1 cut(s)	794
MluCI	AATT	9 cut(s)	612, 1119, 1367, 1419, 1612, 1893, 2255, 2264, 2406
MluNI	TGGCCA	1 cut(s)	794
MlyI	GAGTC	7 cut(s)	305, 562, 722, 987, 1154, 1540, 1711
Mox20I	TGGCCA	1 cut(s)	794
MroI	TCCGGA	1 cut(s)	1806
MroXI	GAANNNNTTC	2 cut(s)	412, 846
MscI	TGGCCA	1 cut(s)	794
MseI	TTAA	6 cut(s)	692, 1074, 1230, 1422, 2304, 2382
Msp20I	TGGCCA	1 cut(s)	794
MspA1I	CMGCKG	2 cut(s)	2075, 2108
MspI	CCGG	7 cut(s)	563, 890, 1067, 1186, 1284, 1325, 1807
MspR9I	CCNGG	5 cut(s)	563, 674, 984, 1260, 1434
MunI	CAATTG	2 cut(s)	1612, 2255
Mva1269I	GAATGC	1 cut(s)	659
MvaI	CCWGG	4 cut(s)	674, 984, 1260, 1434
MvnI	CGCG	1 cut(s)	1451
MwoI	GCNNNNNNNGC	6 cut(s)	383, 477, 899, 1189, 1597, 1910
NciI	CCSGG	1 cut(s)	563
NcoI	CCATGG	1 cut(s)	1463
NdeII	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
NlaIV	GGNNCC	6 cut(s)	20, 21, 59, 167, 1811, 2030
NmeAIII	GCCGAG	1 cut(s)	91
NmuCI	GTSAC	1 cut(s)	1279
NsbI	TGCGCA	1 cut(s)	127
NspI	RCATGY	5 cut(s)	640, 940, 1018, 1561, 2251
NspV	TTCGAA	2 cut(s)	1008, 1743
PaeI	GCATGC	1 cut(s)	1561
PcsI	WCGNNNNNNNCGW	1 cut(s)	1005
PctI	GAATGC	1 cut(s)	659
PdmI	GAANNNNTTC	2 cut(s)	412, 846
PfeI	GAWTC	5 cut(s)	510, 1855, 1970, 2240, 2294
Pfl23II	CGTACG	1 cut(s)	366
PflFI	GACNNNGTC	1 cut(s)	314
PfoI	TCCNGGA	2 cut(s)	672, 1258
PkrI	GCNGC	7 cut(s)	176, 915, 1732, 2110, 2127, 2253, 2354
Ple19I	CGATCG	2 cut(s)	508, 1030
PleI	GAGTC	7 cut(s)	305, 561, 721, 986, 1154, 1540, 1710
PpsI	GAGTC	7 cut(s)	305, 561, 721, 986, 1154, 1540, 1710
Ppu21I	YACGTR	1 cut(s)	1093
PpuMI	RGGWCCY	1 cut(s)	1863
Psp5II	RGGWCCY	1 cut(s)	1863
Psp6I	CCWGG	4 cut(s)	672, 982, 1258, 1432
PspFI	CCCAGC	1 cut(s)	53
PspGI	CCWGG	4 cut(s)	672, 982, 1258, 1432
PspLI	CGTACG	1 cut(s)	366
PspN4I	GGNNCC	6 cut(s)	20, 21, 59, 167, 1811, 2030
PspOMI	GGGCCC	1 cut(s)	19
PspPI	GGNCC	4 cut(s)	19, 20, 1809, 1863
PspPPI	RGGWCCY	1 cut(s)	1863
PstI	CTGCAG	3 cut(s)	746, 1885, 2207
PsuI	RGATCY	3 cut(s)	165, 732, 1335
PsyI	GACNNNGTC	1 cut(s)	314
PvuI	CGATCG	2 cut(s)	508, 1030
RsaI	GTAC	4 cut(s)	368, 1661, 2030, 2391
RsaNI	GTAC	4 cut(s)	367, 1660, 2029, 2390
SalI	GTCGAC	1 cut(s)	998
SaqAI	TTAA	6 cut(s)	692, 1074, 1230, 1422, 2304, 2382
SatI	GCNGC	7 cut(s)	175, 914, 1731, 2109, 2126, 2252, 2353
Sau3AI	GATC	8 cut(s)	165, 291, 351, 505, 732, 925, 1027, 1335
Sau96I	GGNCC	4 cut(s)	19, 20, 1809, 1863
ScaI	AGTACT	1 cut(s)	2391
SchI	GAGTC	7 cut(s)	305, 562, 722, 987, 1154, 1540, 1711
ScrFI	CCNGG	5 cut(s)	563, 674, 984, 1260, 1434
SduI	GDGCHC	3 cut(s)	23, 60, 636
SfaNI	GCATC	3 cut(s)	137, 290, 1336
SfcI	CTRYAG	5 cut(s)	642, 742, 1552, 1881, 2203
SfuI	TTCGAA	2 cut(s)	1008, 1743
SinI	GGWCC	2 cut(s)	1809, 1863
SmlI	CTYRAG	1 cut(s)	1631
SmoI	CTYRAG	1 cut(s)	1631
SnaBI	TACGTA	1 cut(s)	1093
SpeI	ACTAGT	1 cut(s)	2050
SphI	GCATGC	1 cut(s)	1561
Sse9I	AATT	9 cut(s)	612, 1119, 1367, 1419, 1612, 1893, 2255, 2264, 2406
SsiI	CCGC	2 cut(s)	2073, 2106
SspI	AATATT	1 cut(s)	197
SspMI	CTAG	7 cut(s)	524, 605, 815, 1601, 1793, 2051, 2273
StyD4I	CCNGG	5 cut(s)	561, 672, 982, 1258, 1432
StyI	CCWWGG	4 cut(s)	264, 1339, 1463, 1792
TaaI	ACNGT	5 cut(s)	62, 1050, 1266, 1786, 2323
TaiI	ACGT	3 cut(s)	402, 492, 1095
TasI	AATT	9 cut(s)	612, 1119, 1367, 1419, 1612, 1893, 2255, 2264, 2406
TatI	WGTACW	1 cut(s)	2389
TfiI	GAWTC	5 cut(s)	510, 1855, 1970, 2240, 2294
Tru1I	TTAA	6 cut(s)	692, 1074, 1230, 1422, 2304, 2382
Tru9I	TTAA	6 cut(s)	692, 1074, 1230, 1422, 2304, 2382
TscAI	CASTG	1 cut(s)	807
TseFI	GTSAC	1 cut(s)	1279
TseI	GCWGC	7 cut(s)	174, 913, 1730, 2108, 2125, 2251, 2352
Tsp45I	GTSAC	1 cut(s)	1279
TspDTI	ATGAA	2 cut(s)	261, 2052
TspGWI	ACGGA	2 cut(s)	304, 1124
TspRI	CASTG	1 cut(s)	807
Tth111I	GACNNNGTC	1 cut(s)	314
VpaK11BI	GGWCC	2 cut(s)	1809, 1863
XapI	RAATTY	2 cut(s)	1119, 1367
XceI	RCATGY	5 cut(s)	640, 940, 1018, 1561, 2251
XcmI	CCANNNNNNNNNTGG	2 cut(s)	464, 968
XmaJI	CCTAGG	1 cut(s)	1792
XmiI	GTMKAC	2 cut(s)	896, 999
XmnI	GAANNNNTTC	2 cut(s)	412, 846
XspI	CTAG	7 cut(s)	524, 605, 815, 1601, 1793, 2051, 2273
ZraI	GACGTC	2 cut(s)	400, 490
ZrmI	AGTACT	1 cut(s)	2391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.