Survival motor neuron (SMN) interacting protein 1 (SIP1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54380 |
| fragaria_vesca | FvH4_4g11290 FvH4_4g11290 |
| malus_domestica | MD04G1038300.v1.1 MD04G1038400.v1.1 MD13G1258700.v1.1 MD16G1211800.v1.1 |
| prunus_persica | Prupe.1G188800_v2.0.a1 Prupe.1G188800_v2.0.a1 Prupe.1G188800_v2.0.a1 Prupe.1G189100_v2.0.a1 Prupe.1G189100_v2.0.a1 |
| pyrus_communis | pycom04g02980 pycom04g03120 |
| rosa_chinensis | RchiOBHm_Chr4g0407521 RchiOBHm_Chr4g0407531 |
| rosa_laevigata | RLG00000008713 |
| rosa_multiflora | Rmu_co8210254.1_g000001 Rmu_sc0004841.1_g000011 Rmu_sc0009637.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00255900 Rroxscaffold_3G00257360 Rroxscaffold_5G00352150 Rroxscaffold_5G00366810 |
| rosa_rugosa | Rorug04G0080200 Rorug04G0080200 |
| rosa_samantha | Rh1AG095200 Rh2DG536300 Rh4AG144800 Rh4BG142700 Rh4CG151500 Rh4DG138700 Rh5AG108700 |
| rosa_wichuraiana | Rw4G011770 Rw5G009490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 595 |
| Acc36I | ACCTGC | 1 cut(s) | 595 |
| AccB1I | GGYRCC | 1 cut(s) | 1187 |
| AccII | CGCG | 1 cut(s) | 781 |
| AciI | CCGC | 4 cut(s) | 80, 521, 886, 1169 |
| AcoI | YGGCCR | 2 cut(s) | 232, 691 |
| AcsI | RAATTY | 2 cut(s) | 270, 392 |
| AfaI | GTAC | 1 cut(s) | 1233 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 689, 700 |
| AgsI | TTSAA | 9 cut(s) | 40, 257, 266, 470, 643, 650, 812, 935, 1200 |
| AjnI | CCWGG | 3 cut(s) | 537, 682, 1174 |
| AluBI | AGCT | 6 cut(s) | 180, 295, 534, 773, 815, 938 |
| AluI | AGCT | 6 cut(s) | 180, 295, 534, 773, 815, 938 |
| Alw21I | GWGCWC | 3 cut(s) | 182, 536, 718 |
| Alw26I | GTCTC | 4 cut(s) | 199, 239, 244, 401 |
| Alw44I | GTGCAC | 1 cut(s) | 714 |
| Ama87I | CYCGRG | 2 cut(s) | 862, 985 |
| AoxI | GGCC | 6 cut(s) | 232, 691, 879, 1002, 1060, 1067 |
| ApaLI | GTGCAC | 1 cut(s) | 714 |
| ApeKI | GCWGC | 4 cut(s) | 518, 617, 773, 776 |
| ApoI | RAATTY | 2 cut(s) | 270, 392 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 261 |
| AspLEI | GCGC | 4 cut(s) | 589, 604, 781, 922 |
| AspS9I | GGNCC | 2 cut(s) | 1067, 1172 |
| AsuHPI | GGTGA | 4 cut(s) | 216, 401, 452, 619 |
| AsuII | TTCGAA | 1 cut(s) | 510 |
| AvaI | CYCGRG | 2 cut(s) | 862, 985 |
| AvaII | GGWCC | 1 cut(s) | 1172 |
| BaeGI | GKGCMC | 1 cut(s) | 718 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 15, 48 |
| BanI | GGYRCC | 1 cut(s) | 1187 |
| BanII | GRGCYC | 2 cut(s) | 182, 536 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1037, 1069 |
| Bbv12I | GWGCWC | 3 cut(s) | 182, 536, 718 |
| BbvI | GCAGC | 4 cut(s) | 530, 604, 760, 788 |
| BccI | CCATC | 5 cut(s) | 258, 329, 380, 617, 1156 |
| BceAI | ACGGC | 2 cut(s) | 247, 678 |
| BciT130I | CCWGG | 3 cut(s) | 539, 684, 1176 |
| BcoDI | GTCTC | 4 cut(s) | 199, 239, 244, 401 |
| BfaI | CTAG | 1 cut(s) | 939 |
| BfmI | CTRYAG | 2 cut(s) | 591, 774 |
| BfuAI | ACCTGC | 1 cut(s) | 595 |
| BisI | GCNGC | 4 cut(s) | 519, 618, 774, 777 |
| BlpI | GCTNAGC | 1 cut(s) | 1107 |
| BlsI | GCNGC | 4 cut(s) | 520, 619, 775, 778 |
| Bme1390I | CCNGG | 3 cut(s) | 539, 684, 1176 |
| Bme18I | GGWCC | 1 cut(s) | 1172 |
| BmeT110I | CYCGRG | 2 cut(s) | 862, 985 |
| BmgT120I | GGNCC | 2 cut(s) | 1067, 1172 |
| BmiI | GGNNCC | 4 cut(s) | 847, 970, 1173, 1189 |
| BmrFI | CCNGG | 3 cut(s) | 539, 684, 1176 |
| BmsI | GCATC | 3 cut(s) | 338, 468, 1150 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 211, 243 |
| BpmI | CTGGAG | 1 cut(s) | 584 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1107 |
| Bpu14I | TTCGAA | 1 cut(s) | 510 |
| BsaI | GGTCTC | 2 cut(s) | 199, 239 |
| BsaJI | CCNNGG | 4 cut(s) | 537, 682, 694, 1063 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 689, 700 |
| Bse1I | ACTGG | 2 cut(s) | 567, 1070 |
| Bse3DI | GCAATG | 3 cut(s) | 585, 694, 1191 |
| BseBI | CCWGG | 3 cut(s) | 539, 684, 1176 |
| BseDI | CCNNGG | 4 cut(s) | 537, 682, 694, 1063 |
| BseGI | GGATG | 1 cut(s) | 430 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 689, 700 |
| BseMI | GCAATG | 3 cut(s) | 585, 694, 1191 |
| BseMII | CTCAG | 6 cut(s) | 234, 396, 492, 542, 815, 938 |
| BseNI | ACTGG | 2 cut(s) | 567, 1070 |
| BseRI | GAGGAG | 1 cut(s) | 135 |
| BseSI | GKGCMC | 1 cut(s) | 718 |
| BseXI | GCAGC | 4 cut(s) | 530, 604, 760, 788 |
| Bsh1236I | CGCG | 1 cut(s) | 781 |
| BshFI | GGCC | 6 cut(s) | 234, 693, 881, 1004, 1062, 1069 |
| BshNI | GGYRCC | 1 cut(s) | 1187 |
| BsiHKAI | GWGCWC | 3 cut(s) | 182, 536, 718 |
| BsiHKCI | CYCGRG | 2 cut(s) | 862, 985 |
| BslFI | GGGAC | 1 cut(s) | 1185 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 689, 700 |
| BsmAI | GTCTC | 4 cut(s) | 199, 239, 244, 401 |
| BsmFI | GGGAC | 1 cut(s) | 1185 |
| BsmI | GAATGC | 2 cut(s) | 465, 742 |
| BsnI | GGCC | 6 cut(s) | 234, 693, 881, 1004, 1062, 1069 |
| Bso31I | GGTCTC | 2 cut(s) | 199, 239 |
| BsoBI | CYCGRG | 2 cut(s) | 862, 985 |
| Bsp119I | TTCGAA | 1 cut(s) | 510 |
| Bsp1286I | GDGCHC | 3 cut(s) | 182, 536, 718 |
| Bsp143I | GATC | 3 cut(s) | 135, 852, 975 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1107 |
| BspACI | CCGC | 4 cut(s) | 80, 521, 886, 1169 |
| BspANI | GGCC | 6 cut(s) | 234, 693, 881, 1004, 1062, 1069 |
| BspCNI | CTCAG | 6 cut(s) | 235, 397, 493, 541, 816, 939 |
| BspFNI | CGCG | 1 cut(s) | 781 |
| BspLI | GGNNCC | 4 cut(s) | 847, 970, 1173, 1189 |
| BspMAI | CTGCAG | 2 cut(s) | 595, 778 |
| BspMI | ACCTGC | 1 cut(s) | 595 |
| BspT104I | TTCGAA | 1 cut(s) | 510 |
| BspT107I | GGYRCC | 1 cut(s) | 1187 |
| BspTNI | GGTCTC | 2 cut(s) | 199, 239 |
| BsrDI | GCAATG | 3 cut(s) | 585, 694, 1191 |
| BsrI | ACTGG | 2 cut(s) | 567, 1070 |
| BssECI | CCNNGG | 4 cut(s) | 537, 682, 694, 1063 |
| BssMI | GATC | 3 cut(s) | 135, 852, 975 |
| BssT1I | CCWWGG | 1 cut(s) | 1063 |
| Bst2UI | CCWGG | 3 cut(s) | 539, 684, 1176 |
| Bst4CI | ACNGT | 2 cut(s) | 1041, 1058 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 584, 773 |
| BstBI | TTCGAA | 1 cut(s) | 510 |
| BstC8I | GCNNGC | 2 cut(s) | 585, 591 |
| BstDEI | CTNAG | 7 cut(s) | 243, 405, 501, 528, 824, 947, 1107 |
| BstDSI | CCRYGG | 1 cut(s) | 694 |
| BstF5I | GGATG | 1 cut(s) | 430 |
| BstFNI | CGCG | 1 cut(s) | 781 |
| BstHHI | GCGC | 4 cut(s) | 589, 604, 781, 922 |
| BstKTI | GATC | 3 cut(s) | 138, 855, 978 |
| BstMAI | GTCTC | 4 cut(s) | 199, 239, 244, 401 |
| BstMBI | GATC | 3 cut(s) | 135, 852, 975 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 584, 599, 773 |
| BstNI | CCWGG | 3 cut(s) | 539, 684, 1176 |
| BstNSI | RCATGY | 1 cut(s) | 30 |
| BstSCI | CCNGG | 3 cut(s) | 537, 682, 1174 |
| BstSFI | CTRYAG | 2 cut(s) | 591, 774 |
| BstSLI | GKGCMC | 1 cut(s) | 718 |
| BstUI | CGCG | 1 cut(s) | 781 |
| BstV1I | GCAGC | 4 cut(s) | 530, 604, 760, 788 |
| BsuRI | GGCC | 6 cut(s) | 234, 693, 881, 1004, 1062, 1069 |
| BtgI | CCRYGG | 1 cut(s) | 694 |
| BtgZI | GCGATG | 1 cut(s) | 1127 |
| BtsCI | GGATG | 1 cut(s) | 430 |
| BtsIMutI | CAGTG | 1 cut(s) | 1063 |
| BveI | ACCTGC | 1 cut(s) | 595 |
| Cac8I | GCNNGC | 2 cut(s) | 585, 591 |
| CfoI | GCGC | 4 cut(s) | 589, 604, 781, 922 |
| Cfr13I | GGNCC | 2 cut(s) | 1067, 1172 |
| CseI | GACGC | 2 cut(s) | 19, 167 |
| CsiI | ACCWGGT | 1 cut(s) | 1174 |
| Csp6I | GTAC | 1 cut(s) | 1232 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 676, 711 |
| CviAII | CATG | 4 cut(s) | 27, 355, 883, 1006 |
| CviQI | GTAC | 1 cut(s) | 1232 |
| DdeI | CTNAG | 7 cut(s) | 243, 405, 501, 528, 824, 947, 1107 |
| DpnI | GATC | 3 cut(s) | 137, 854, 977 |
| DpnII | GATC | 3 cut(s) | 135, 852, 975 |
| EaeI | YGGCCR | 2 cut(s) | 232, 691 |
| Ecl136II | GAGCTC | 2 cut(s) | 180, 534 |
| Eco130I | CCWWGG | 1 cut(s) | 1063 |
| Eco24I | GRGCYC | 2 cut(s) | 182, 536 |
| Eco31I | GGTCTC | 2 cut(s) | 199, 239 |
| Eco47I | GGWCC | 1 cut(s) | 1172 |
| Eco53kI | GAGCTC | 2 cut(s) | 180, 534 |
| Eco88I | CYCGRG | 2 cut(s) | 862, 985 |
| EcoICRI | GAGCTC | 2 cut(s) | 180, 534 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1172 |
| EcoRI | GAATTC | 1 cut(s) | 392 |
| EcoRII | CCWGG | 3 cut(s) | 537, 682, 1174 |
| EcoT14I | CCWWGG | 1 cut(s) | 1063 |
| EcoT38I | GRGCYC | 2 cut(s) | 182, 536 |
| ErhI | CCWWGG | 1 cut(s) | 1063 |
| FaeI | CATG | 4 cut(s) | 30, 358, 886, 1009 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 567, 599 |
| FaqI | GGGAC | 1 cut(s) | 1185 |
| FatI | CATG | 4 cut(s) | 26, 354, 882, 1005 |
| FauI | CCCGC | 2 cut(s) | 87, 1162 |
| Fnu4HI | GCNGC | 4 cut(s) | 519, 618, 774, 777 |
| FokI | GGATG | 1 cut(s) | 437 |
| FriOI | GRGCYC | 2 cut(s) | 182, 536 |
| Fsp4HI | GCNGC | 4 cut(s) | 519, 618, 774, 777 |
| FspBI | CTAG | 1 cut(s) | 939 |
| GlaI | GCGC | 4 cut(s) | 588, 603, 780, 921 |
| GluI | GCNGC | 4 cut(s) | 519, 618, 774, 777 |
| GsuI | CTGGAG | 1 cut(s) | 584 |
| HaeIII | GGCC | 6 cut(s) | 234, 693, 881, 1004, 1062, 1069 |
| HgaI | GACGC | 2 cut(s) | 19, 167 |
| HhaI | GCGC | 4 cut(s) | 589, 604, 781, 922 |
| Hin1II | CATG | 4 cut(s) | 30, 358, 886, 1009 |
| Hin6I | GCGC | 4 cut(s) | 587, 602, 779, 920 |
| HinP1I | GCGC | 4 cut(s) | 587, 602, 779, 920 |
| HphI | GGTGA | 4 cut(s) | 216, 401, 452, 619 |
| Hpy166II | GTNNAC | 2 cut(s) | 224, 716 |
| Hpy188I | TCNGA | 9 cut(s) | 22, 61, 91, 150, 199, 244, 334, 385, 531 |
| Hpy188III | TCNNGA | 6 cut(s) | 110, 254, 266, 397, 422, 643 |
| Hpy8I | GTNNAC | 2 cut(s) | 224, 716 |
| Hpy99I | CGWCG | 1 cut(s) | 35 |
| HpyAV | CCTTC | 9 cut(s) | 205, 430, 437, 592, 694, 862, 985, 1039, 1200 |
| HpyCH4III | ACNGT | 2 cut(s) | 1041, 1058 |
| HpyCH4IV | ACGT | 1 cut(s) | 1234 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 584, 599, 773 |
| HpyF3I | CTNAG | 7 cut(s) | 243, 405, 501, 528, 824, 947, 1107 |
| HpySE526I | ACGT | 1 cut(s) | 1234 |
| Hsp92II | CATG | 4 cut(s) | 30, 358, 886, 1009 |
| HspAI | GCGC | 4 cut(s) | 587, 602, 779, 920 |
| Kzo9I | GATC | 3 cut(s) | 135, 852, 975 |
| LmnI | GCTCC | 1 cut(s) | 539 |
| Lsp1109I | GCAGC | 4 cut(s) | 530, 604, 760, 788 |
| LweI | GCATC | 3 cut(s) | 338, 468, 1150 |
| MabI | ACCWGGT | 1 cut(s) | 1174 |
| MaeI | CTAG | 1 cut(s) | 939 |
| MaeII | ACGT | 1 cut(s) | 1234 |
| MaeIII | GTNAC | 2 cut(s) | 397, 980 |
| MalI | GATC | 3 cut(s) | 137, 854, 977 |
| MboI | GATC | 3 cut(s) | 135, 852, 975 |
| MboII | GAAGA | 8 cut(s) | 74, 269, 445, 559, 562, 1045, 1129, 1171 |
| MhlI | GDGCHC | 3 cut(s) | 182, 536, 718 |
| MluCI | AATT | 7 cut(s) | 105, 270, 277, 361, 392, 557, 654 |
| MlyI | GAGTC | 4 cut(s) | 209, 412, 500, 512 |
| MmeI | TCCRAC | 2 cut(s) | 855, 978 |
| MroXI | GAANNNNTTC | 1 cut(s) | 261 |
| MspA1I | CMGCKG | 1 cut(s) | 521 |
| MspR9I | CCNGG | 3 cut(s) | 539, 684, 1176 |
| Mva1269I | GAATGC | 2 cut(s) | 465, 742 |
| MvaI | CCWGG | 3 cut(s) | 539, 684, 1176 |
| MvnI | CGCG | 1 cut(s) | 781 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 584, 599, 773 |
| NdeII | GATC | 3 cut(s) | 135, 852, 975 |
| NlaIII | CATG | 4 cut(s) | 30, 358, 886, 1009 |
| NlaIV | GGNNCC | 4 cut(s) | 847, 970, 1173, 1189 |
| NmuCI | GTSAC | 1 cut(s) | 397 |
| NspI | RCATGY | 1 cut(s) | 30 |
| NspV | TTCGAA | 1 cut(s) | 510 |
| PaeR7I | CTCGAG | 2 cut(s) | 862, 985 |
| PaqCI | CACCTGC | 1 cut(s) | 595 |
| PctI | GAATGC | 2 cut(s) | 465, 742 |
| PdmI | GAANNNNTTC | 1 cut(s) | 261 |
| PfeI | GAWTC | 6 cut(s) | 17, 56, 92, 524, 799, 1213 |
| PkrI | GCNGC | 4 cut(s) | 520, 619, 775, 778 |
| PleI | GAGTC | 4 cut(s) | 208, 412, 499, 511 |
| PpsI | GAGTC | 4 cut(s) | 208, 412, 499, 511 |
| PpuMI | RGGWCCY | 1 cut(s) | 1172 |
| Psp124BI | GAGCTC | 2 cut(s) | 182, 536 |
| Psp5II | RGGWCCY | 1 cut(s) | 1172 |
| Psp6I | CCWGG | 3 cut(s) | 537, 682, 1174 |
| PspGI | CCWGG | 3 cut(s) | 537, 682, 1174 |
| PspN4I | GGNNCC | 4 cut(s) | 847, 970, 1173, 1189 |
| PspPI | GGNCC | 2 cut(s) | 1067, 1172 |
| PspPPI | RGGWCCY | 1 cut(s) | 1172 |
| PspXI | VCTCGAGB | 2 cut(s) | 862, 985 |
| PstI | CTGCAG | 2 cut(s) | 595, 778 |
| RsaI | GTAC | 1 cut(s) | 1233 |
| RsaNI | GTAC | 1 cut(s) | 1232 |
| SacI | GAGCTC | 2 cut(s) | 182, 536 |
| SatI | GCNGC | 4 cut(s) | 519, 618, 774, 777 |
| Sau3AI | GATC | 3 cut(s) | 135, 852, 975 |
| Sau96I | GGNCC | 2 cut(s) | 1067, 1172 |
| SchI | GAGTC | 4 cut(s) | 209, 412, 500, 512 |
| ScrFI | CCNGG | 3 cut(s) | 539, 684, 1176 |
| SduI | GDGCHC | 3 cut(s) | 182, 536, 718 |
| SexAI | ACCWGGT | 1 cut(s) | 1174 |
| SfaNI | GCATC | 3 cut(s) | 338, 468, 1150 |
| SfcI | CTRYAG | 2 cut(s) | 591, 774 |
| Sfr274I | CTCGAG | 2 cut(s) | 862, 985 |
| SfuI | TTCGAA | 1 cut(s) | 510 |
| SinI | GGWCC | 1 cut(s) | 1172 |
| SlaI | CTCGAG | 2 cut(s) | 862, 985 |
| SmlI | CTYRAG | 2 cut(s) | 862, 985 |
| SmoI | CTYRAG | 2 cut(s) | 862, 985 |
| Sse9I | AATT | 7 cut(s) | 105, 270, 277, 361, 392, 557, 654 |
| SsiI | CCGC | 4 cut(s) | 80, 521, 886, 1169 |
| SspMI | CTAG | 1 cut(s) | 939 |
| SstI | GAGCTC | 2 cut(s) | 182, 536 |
| StyD4I | CCNGG | 3 cut(s) | 537, 682, 1174 |
| StyI | CCWWGG | 1 cut(s) | 1063 |
| TaaI | ACNGT | 2 cut(s) | 1041, 1058 |
| TaiI | ACGT | 1 cut(s) | 1237 |
| TaqI | TCGA | 5 cut(s) | 171, 510, 863, 894, 986 |
| TasI | AATT | 7 cut(s) | 105, 270, 277, 361, 392, 557, 654 |
| TfiI | GAWTC | 6 cut(s) | 17, 56, 92, 524, 799, 1213 |
| TscAI | CASTG | 1 cut(s) | 1063 |
| TseFI | GTSAC | 1 cut(s) | 397 |
| TseI | GCWGC | 4 cut(s) | 518, 617, 773, 776 |
| Tsp45I | GTSAC | 1 cut(s) | 397 |
| TspDTI | ATGAA | 5 cut(s) | 157, 303, 343, 767, 1235 |
| TspGWI | ACGGA | 2 cut(s) | 87, 503 |
| TspRI | CASTG | 1 cut(s) | 1063 |
| VneI | GTGCAC | 1 cut(s) | 714 |
| VpaK11BI | GGWCC | 1 cut(s) | 1172 |
| XapI | RAATTY | 2 cut(s) | 270, 392 |
| XceI | RCATGY | 1 cut(s) | 30 |
| XhoI | CTCGAG | 2 cut(s) | 862, 985 |
| XmnI | GAANNNNTTC | 1 cut(s) | 261 |
| XspI | CTAG | 1 cut(s) | 939 |