Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0003622

Physical Location & Seq

Genomic Coordinates Forward (+)

25377171 .. 25382210

Gene Structure 5040 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG142700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGCAGACGATATGGGTTCTGATACTACATGCGTCGGCAGCAAGCGAAGCGTGGAAGAGATCGAAGAGACTCAAACTGGGTCTCCAATTCCAGAGCAAGATAGCCACCACGCAAACTCGTCTGACATCGTTTCGCCTCTGAAACAAGACCACGAATTCATCCCCAAGACCCCGCCTTTCCTCGTCTCTGAGTCCTCCAAGAAGGTCAAGTCTTCACCTGACTACGGCCAAGATATGCCCGCTTCTGGGTTTTCTGTTTCTGATTCTGTGGGAAATGAAGTGGGTCTCTCTGGAATTCAAGAAAGCAAGAAGGAAGGCTTGGCTACTTCTGAGAATCTCTTGGATGTGAAAAAGAAGCAATTGTTGGAGGAGGTTGAAGCCAATCTTGTGCCTGCAGAGAAAAAGGTCTCTTCTTTGAGAGTTGAAATAATTGATGAAACTGCATTGATTGAAACTTTCAAGCCAATGGGTTTTCTGGGTCATGCTAAATCTGGTGCACAGAGGAATGCAAAGCAAGAAGTTAATGGAAAGAAGGCAAGAAACCAACGAAGGAAAGAGAAGCTGGCAAATGGGTTCAAGCTGCCTGAGAATACCATCCATGTGGTTCAACCTCCTCACAGCTCAGGAGCCAAGAAGATCACTTACTCGAGGATGGAGTTGGAGGCCATGCGGTTTGTGAATCTTGCAGAACAGAGGAAGCTGTGGGAACATGTGTACAATGGGCTTGGGCCAGTGGTGGCAAGGGAGTATGATGATCTGGCAGTCTCTAAGCATCAGAAGAACATCCAGTTCAACTCTGATCATCGTAAGCGCTATGGGAAGATGGACCAGGCACCTGGCATTCTTGGGGAATCATTAGGAAACTCGGTGAATAATGAAACCCAAGATGTCAGTCTCCTGGACCCTGTTTGCAGTTATAATGTTACTAATGAAGATGGGTATCCATTTCCAGAAAAAGAGTGCAGCGATGATGATGACAGTGACGAAGAGTATGCTAGCATTCAGAGGCCTGCCTTTTTGGTTGAAGGAGAACCCAATTTTGATTCTGGGTCACCAGAAGATGGATTTGAGTACCTTAGGCGTGTCAGGTGGGAAGCTGCTCAAATTCCAAAAGTGAGGGTAGCCAAGGTTGATAGAAGCAAATTTAACAGAGAACAGAGTGATTATATGCCCAAAATTCCTGAGATTGCTAAATGTCCAGAACAATTGCTGCCGCTGAAACAATGGGAGGAGGCTTTTCTTGCCGATTTTTCAGATCTAAGGCTGGATCTGTCTCGTTTTGAGGGTTCTAGTGCCAACACATCTCAAGATTCGCAATCAAAAGTTATTCTTCACAAGAATTGCTCCTCCCATCAGCCACCGGTCAATATTGTTTTTGAAAATTTTGCTCATGTCAAATCTACGGAAATTGACTGCACGGAAAACTCCGATTATCAGCCATCCTTGTTGACTGCTGAAGGTGGTAGTGCCTCACCCCCTGTGGAAAACTTCAGTCCTAAAGCTTCTGTGGATCATAGTTCCAGAGACTCCCCGTTGTTGTCTGTGATTTTTAGATTGGACTCTGTTGCTAGAGTATCTATGTTGAGAAAACGCATAAAGGCAGCAGAGGACACCAGCACACTGTCAAGGGATGATTGCCTGTGGCTATTTGCGCTGTGTGCAGTAGTTGATACTCCACTGGATGCTGACACCAGTGCTTCTGTGCGGAGTCTGCTAAGGAAGTGTGCTGCATTGCGAGCTACAAAATCTACAGTTGACGATGAGTTAATAATGTTGAATATTCTTGCCACAATATCAGGTAGATATTTCGGGCAGTCAGAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0022607 GO:0022613 GO:0022618 GO:0031974 GO:0031981 GO:0032797 GO:0032991 GO:0034622 GO:0034641 GO:0034719 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097504 GO:0120114 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

SIP1

Protein Analysis

608

Amino Acids

67.48

Weight (kDa)

5.2

Isoelectric Point (pI)

55.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SIP1	PF04938	344 - 606	1.6e-47	Survival motor neuron (SMN) interacting protein 1 (SIP1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54380
fragaria_vesca	FvH4_4g11290 FvH4_4g11290
malus_domestica	MD04G1038300.v1.1 MD04G1038400.v1.1 MD13G1258700.v1.1 MD16G1211800.v1.1
prunus_persica	Prupe.1G188800_v2.0.a1 Prupe.1G188800_v2.0.a1 Prupe.1G188800_v2.0.a1 Prupe.1G189100_v2.0.a1 Prupe.1G189100_v2.0.a1
pyrus_communis	pycom04g02980 pycom04g03120
rosa_chinensis	RchiOBHm_Chr4g0407521 RchiOBHm_Chr4g0407531
rosa_laevigata	RLG00000008713
rosa_multiflora	Rmu_co8210254.1_g000001 Rmu_sc0004841.1_g000011 Rmu_sc0009637.1_g000003
rosa_roxburghii	Rroxscaffold_3G00255900 Rroxscaffold_3G00257360 Rroxscaffold_5G00352150 Rroxscaffold_5G00366810
rosa_rugosa	Rorug04G0080200 Rorug04G0080200
rosa_samantha	Rh1AG095200 Rh2DG536300 Rh4AG144800 Rh4BG142700 Rh4CG151500 Rh4DG138700 Rh5AG108700
rosa_wichuraiana	Rw4G011770 Rw5G009490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	918
AccB1I	GGYRCC	1 cut(s)	832
AccB7I	CCANNNNNTGG	1 cut(s)	1061
AciI	CCGC	5 cut(s)	173, 240, 670, 1214, 1705
AclWI	GGATC	2 cut(s)	1275, 1518
AcoI	YGGCCR	1 cut(s)	226
AcsI	RAATTY	6 cut(s)	155, 294, 1104, 1142, 1176, 1381
AcuI	CTGAAG	2 cut(s)	1474, 1476
AfaI	GTAC	2 cut(s)	716, 1073
AfeI	AGCGCT	1 cut(s)	812
AfiI	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1061
AflIII	ACRYGT	1 cut(s)	709
AgeI	ACCGGT	1 cut(s)	1360
AjnI	CCWGG	3 cut(s)	828, 835, 897
AjuI	GAANNNNNNNTTGG	4 cut(s)	302, 334, 347, 379
AluBI	AGCT	7 cut(s)	562, 580, 621, 700, 1097, 1502, 1739
AluI	AGCT	7 cut(s)	562, 580, 621, 700, 1097, 1502, 1739
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 769, 899, 1278, 1518
Alw44I	GTGCAC	1 cut(s)	495
AlwI	GGATC	2 cut(s)	1275, 1518
Ama87I	CYCGRG	1 cut(s)	646
Aor51HI	AGCGCT	1 cut(s)	812
AoxI	GGCC	4 cut(s)	226, 663, 728, 1007
ApaLI	GTGCAC	1 cut(s)	495
ApeKI	GCWGC	7 cut(s)	39, 580, 963, 1097, 1210, 1601, 1727
ApoI	RAATTY	6 cut(s)	155, 294, 1104, 1142, 1176, 1381
AsiGI	ACCGGT	1 cut(s)	1360
AspLEI	GCGC	2 cut(s)	813, 1654
AspS9I	GGNCC	3 cut(s)	728, 826, 901
AsuHPI	GGTGA	4 cut(s)	207, 880, 1044, 1464
AsuNHI	GCTAGC	1 cut(s)	995
AvaI	CYCGRG	1 cut(s)	646
AvaII	GGWCC	2 cut(s)	826, 901
AxyI	CCTNAGG	1 cut(s)	1076
BaeGI	GKGCMC	1 cut(s)	499
BanI	GGYRCC	1 cut(s)	832
BarI	GAAGNNNNNNTAC	2 cut(s)	626, 658
BbsI	GAAGAC	1 cut(s)	204
Bbv12I	GWGCWC	1 cut(s)	499
BbvI	GCAGC	7 cut(s)	51, 567, 975, 1084, 1197, 1613, 1714
BccI	CCATC	7 cut(s)	602, 646, 817, 929, 1055, 1359, 1447
BceAI	ACGGC	1 cut(s)	241
BcgI	CGANNNNNNTGC	2 cut(s)	974, 1008
BciT130I	CCWGG	3 cut(s)	830, 837, 899
BciVI	GTATCC	1 cut(s)	951
BclI	TGATCA	1 cut(s)	799
BcoDI	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 769, 899, 1278, 1518
BfaI	CTAG	3 cut(s)	996, 1290, 1569
BfmI	CTRYAG	2 cut(s)	393, 1749
BfoI	RGCGCY	1 cut(s)	814
BfuI	GTATCC	1 cut(s)	951
BglII	AGATCT	1 cut(s)	1255
BisI	GCNGC	8 cut(s)	40, 581, 964, 1098, 1211, 1214, 1602, 1728
BlsI	GCNGC	8 cut(s)	41, 582, 965, 1099, 1212, 1215, 1603, 1729
Bme1390I	CCNGG	3 cut(s)	830, 837, 899
Bme18I	GGWCC	2 cut(s)	826, 901
BmeT110I	CYCGRG	1 cut(s)	646
BmgT120I	GGNCC	3 cut(s)	728, 826, 901
BmiI	GGNNCC	3 cut(s)	628, 834, 903
BmrFI	CCNGG	3 cut(s)	830, 837, 899
BmrI	ACTGGG	1 cut(s)	87
BmsI	GCATC	2 cut(s)	781, 1672
BmtI	GCTAGC	1 cut(s)	999
BmuI	ACTGGG	1 cut(s)	87
BpiI	GAAGAC	1 cut(s)	204
Bpu10I	CCTNAGC	2 cut(s)	622, 1715
BpuEI	CTTGAG	1 cut(s)	1290
BsaBI	GATNNNNATC	1 cut(s)	939
BsaI	GGTCTC	3 cut(s)	87, 290, 412
BsaJI	CCNNGG	1 cut(s)	1125
BsaWI	WCCGGW	1 cut(s)	1360
BsaXI	ACNNNNNCTCC	2 cut(s)	67, 97
Bsc4I	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1061
Bse118I	RCCGGY	1 cut(s)	1360
Bse1I	ACTGG	5 cut(s)	82, 731, 787, 1683, 1692
Bse21I	CCTNAGG	1 cut(s)	1076
Bse3DI	GCAATG	1 cut(s)	1730
Bse8I	GATNNNNATC	1 cut(s)	939
BseBI	CCWGG	3 cut(s)	830, 837, 899
BseDI	CCNNGG	1 cut(s)	1125
BseGI	GGATG	8 cut(s)	159, 349, 594, 657, 783, 1439, 1636, 1687
BseJI	GATNNNNATC	1 cut(s)	939
BseLI	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1061
BseMI	GCAATG	1 cut(s)	1730
BseMII	CTCAG	5 cut(s)	180, 321, 576, 636, 1173
BseNI	ACTGG	5 cut(s)	82, 731, 787, 1683, 1692
BseRI	GAGGAG	4 cut(s)	383, 603, 1244, 1336
BseSI	GKGCMC	1 cut(s)	499
BseXI	GCAGC	7 cut(s)	51, 567, 975, 1084, 1197, 1613, 1714
BsgI	GTGCAG	3 cut(s)	982, 1399, 1680
BshFI	GGCC	4 cut(s)	228, 665, 730, 1009
BshNI	GGYRCC	1 cut(s)	832
BshTI	ACCGGT	1 cut(s)	1360
BsiHKAI	GWGCWC	1 cut(s)	499
BsiHKCI	CYCGRG	1 cut(s)	646
BsiSI	CCGG	1 cut(s)	1361
BslI	CCNNNNNNNGG	4 cut(s)	224, 245, 246, 1061
BsmAI	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 769, 899, 1278, 1518
BsmBI	CGTCTC	1 cut(s)	190
BsmI	GAATGC	3 cut(s)	511, 840, 999
BsnI	GGCC	4 cut(s)	228, 665, 730, 1009
Bso31I	GGTCTC	3 cut(s)	87, 290, 412
BsoBI	CYCGRG	1 cut(s)	646
Bsp1286I	GDGCHC	1 cut(s)	499
Bsp1407I	TGTACA	1 cut(s)	714
Bsp143I	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
BspACI	CCGC	5 cut(s)	173, 240, 670, 1214, 1705
BspANI	GGCC	4 cut(s)	228, 665, 730, 1009
BspCNI	CTCAG	5 cut(s)	181, 322, 577, 635, 1174
BspLI	GGNNCC	3 cut(s)	628, 834, 903
BspMAI	CTGCAG	1 cut(s)	397
BspOI	GCTAGC	1 cut(s)	999
BspPI	GGATC	2 cut(s)	1275, 1518
BspT107I	GGYRCC	1 cut(s)	832
BspTNI	GGTCTC	3 cut(s)	87, 290, 412
BsrDI	GCAATG	1 cut(s)	1730
BsrFI	RCCGGY	1 cut(s)	1360
BsrGI	TGTACA	1 cut(s)	714
BsrI	ACTGG	5 cut(s)	82, 731, 787, 1683, 1692
BssAI	RCCGGY	1 cut(s)	1360
BssECI	CCNNGG	1 cut(s)	1125
BssMI	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
BssT1I	CCWWGG	1 cut(s)	1125
Bst2UI	CCWGG	3 cut(s)	830, 837, 899
Bst4CI	ACNGT	3 cut(s)	980, 1623, 1753
Bst6I	CTCTTC	4 cut(s)	51, 60, 415, 981
BstAUI	TGTACA	1 cut(s)	714
BstC8I	GCNNGC	7 cut(s)	44, 240, 393, 564, 997, 1011, 1737
BstDEI	CTNAG	9 cut(s)	189, 330, 585, 622, 768, 1076, 1182, 1259, 1715
BstEII	GGTNACC	1 cut(s)	1050
BstF5I	GGATG	8 cut(s)	159, 349, 594, 657, 783, 1439, 1636, 1687
BstH2I	RGCGCY	1 cut(s)	814
BstHHI	GCGC	2 cut(s)	813, 1654
BstKTI	GATC	7 cut(s)	63, 639, 757, 802, 1258, 1270, 1513
BstMAI	GTCTC	9 cut(s)	62, 87, 190, 290, 412, 769, 899, 1278, 1518
BstMBI	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 48, 1241, 1651, 1658, 1711, 1736
BstNI	CCWGG	3 cut(s)	830, 837, 899
BstNSI	RCATGY	2 cut(s)	33, 713
BstPI	GGTNACC	1 cut(s)	1050
BstSCI	CCNGG	3 cut(s)	828, 835, 897
BstSFI	CTRYAG	2 cut(s)	393, 1749
BstSLI	GKGCMC	1 cut(s)	499
BstV1I	GCAGC	7 cut(s)	51, 567, 975, 1084, 1197, 1613, 1714
BstV2I	GAAGAC	1 cut(s)	204
BstX2I	RGATCY	2 cut(s)	1255, 1267
BstXI	CCANNNNNNTGG	2 cut(s)	601, 836
BstYI	RGATCY	2 cut(s)	1255, 1267
Bsu36I	CCTNAGG	1 cut(s)	1076
BsuI	GTATCC	1 cut(s)	951
BsuRI	GGCC	4 cut(s)	228, 665, 730, 1009
BtgZI	GCGATG	1 cut(s)	981
BtsCI	GGATG	8 cut(s)	159, 349, 594, 657, 783, 1439, 1636, 1687
BtsIMutI	CAGTG	5 cut(s)	738, 985, 1619, 1676, 1699
Cac8I	GCNNGC	7 cut(s)	44, 240, 393, 564, 997, 1011, 1737
CfoI	GCGC	2 cut(s)	813, 1654
Cfr10I	RCCGGY	1 cut(s)	1360
Cfr13I	GGNCC	3 cut(s)	728, 826, 901
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	2 cut(s)	715, 1072
CspAI	ACCGGT	1 cut(s)	1360
CviAII	CATG	6 cut(s)	30, 482, 599, 667, 710, 1391
CviQI	GTAC	2 cut(s)	715, 1072
DdeI	CTNAG	9 cut(s)	189, 330, 585, 622, 768, 1076, 1182, 1259, 1715
DpnI	GATC	7 cut(s)	62, 638, 756, 801, 1257, 1269, 1512
DpnII	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
EaeI	YGGCCR	1 cut(s)	226
Eam1104I	CTCTTC	4 cut(s)	51, 60, 415, 981
EarI	CTCTTC	4 cut(s)	51, 60, 415, 981
Eco130I	CCWWGG	1 cut(s)	1125
Eco147I	AGGCCT	1 cut(s)	1009
Eco31I	GGTCTC	3 cut(s)	87, 290, 412
Eco47I	GGWCC	2 cut(s)	826, 901
Eco47III	AGCGCT	1 cut(s)	812
Eco57I	CTGAAG	2 cut(s)	1474, 1476
Eco81I	CCTNAGG	1 cut(s)	1076
Eco88I	CYCGRG	1 cut(s)	646
Eco91I	GGTNACC	1 cut(s)	1050
EcoO65I	GGTNACC	1 cut(s)	1050
EcoRI	GAATTC	2 cut(s)	155, 294
EcoRII	CCWGG	3 cut(s)	828, 835, 897
EcoT14I	CCWWGG	1 cut(s)	1125
ErhI	CCWWGG	1 cut(s)	1125
Esp3I	CGTCTC	1 cut(s)	190
FaeI	CATG	6 cut(s)	33, 485, 602, 670, 713, 1394
FalI	AAGNNNNNCTT	6 cut(s)	302, 334, 369, 401, 1314, 1346
FatI	CATG	6 cut(s)	29, 481, 598, 666, 709, 1390
FauI	CCCGC	2 cut(s)	180, 247
FbaI	TGATCA	1 cut(s)	799
Fnu4HI	GCNGC	8 cut(s)	40, 581, 964, 1098, 1211, 1214, 1602, 1728
FokI	GGATG	8 cut(s)	146, 356, 581, 664, 770, 1426, 1643, 1694
Fsp4HI	GCNGC	8 cut(s)	40, 581, 964, 1098, 1211, 1214, 1602, 1728
FspBI	CTAG	3 cut(s)	996, 1290, 1569
GlaI	GCGC	2 cut(s)	812, 1653
GluI	GCNGC	8 cut(s)	40, 581, 964, 1098, 1211, 1214, 1602, 1728
HaeII	RGCGCY	1 cut(s)	814
HaeIII	GGCC	4 cut(s)	228, 665, 730, 1009
HapII	CCGG	1 cut(s)	1361
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	2 cut(s)	813, 1654
Hin1II	CATG	6 cut(s)	33, 485, 602, 670, 713, 1394
Hin6I	GCGC	2 cut(s)	811, 1652
HinP1I	GCGC	2 cut(s)	811, 1652
HincII	GTYRAC	2 cut(s)	1449, 1756
HindII	GTYRAC	2 cut(s)	1449, 1756
HindIII	AAGCTT	1 cut(s)	1500
HpaII	CCGG	1 cut(s)	1361
HphI	GGTGA	4 cut(s)	207, 880, 1044, 1464
Hpy166II	GTNNAC	4 cut(s)	497, 715, 1449, 1756
Hpy188III	TCNNGA	9 cut(s)	92, 291, 299, 624, 950, 1181, 1199, 1307, 1521
Hpy8I	GTNNAC	4 cut(s)	497, 715, 1449, 1756
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	7 cut(s)	196, 304, 308, 526, 543, 1019, 1451
HpyCH4III	ACNGT	3 cut(s)	980, 1623, 1753
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 48, 1241, 1651, 1658, 1711, 1736
HpyF3I	CTNAG	9 cut(s)	189, 330, 585, 622, 768, 1076, 1182, 1259, 1715
Hsp92II	CATG	6 cut(s)	33, 485, 602, 670, 713, 1394
HspAI	GCGC	2 cut(s)	811, 1652
Ksp22I	TGATCA	1 cut(s)	799
Kzo9I	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
LmnI	GCTCC	2 cut(s)	626, 1349
Lsp1109I	GCAGC	7 cut(s)	51, 567, 975, 1084, 1197, 1613, 1714
LweI	GCATC	2 cut(s)	781, 1672
MaeI	CTAG	3 cut(s)	996, 1290, 1569
MaeIII	GTNAC	3 cut(s)	922, 980, 1050
MalI	GATC	7 cut(s)	62, 638, 756, 801, 1257, 1269, 1512
MboI	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
MfeI	CAATTG	2 cut(s)	359, 1205
MflI	RGATCY	2 cut(s)	1255, 1267
MhlI	GDGCHC	1 cut(s)	499
MlyI	GAGTC	5 cut(s)	64, 200, 1520, 1553, 1717
MmeI	TCCRAC	2 cut(s)	345, 639
MseI	TTAA	3 cut(s)	522, 1146, 1766
MslI	CAYNNNNRTG	1 cut(s)	599
MspA1I	CMGCKG	1 cut(s)	1216
MspI	CCGG	1 cut(s)	1361
MspR9I	CCNGG	3 cut(s)	830, 837, 899
MunI	CAATTG	2 cut(s)	359, 1205
Mva1269I	GAATGC	3 cut(s)	511, 840, 999
MvaI	CCWGG	3 cut(s)	830, 837, 899
MwoI	GCNNNNNNNGC	7 cut(s)	39, 48, 1241, 1651, 1658, 1711, 1736
NdeII	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
NheI	GCTAGC	1 cut(s)	995
NlaIII	CATG	6 cut(s)	33, 485, 602, 670, 713, 1394
NlaIV	GGNNCC	3 cut(s)	628, 834, 903
NmuCI	GTSAC	2 cut(s)	980, 1050
NspI	RCATGY	2 cut(s)	33, 713
PaeR7I	CTCGAG	1 cut(s)	646
PceI	AGGCCT	1 cut(s)	1009
PciI	ACATGT	1 cut(s)	709
PctI	GAATGC	3 cut(s)	511, 840, 999
PfeI	GAWTC	6 cut(s)	263, 334, 679, 851, 1043, 1310
PflMI	CCANNNNNTGG	1 cut(s)	1061
PfoI	TCCNGGA	1 cut(s)	897
PinAI	ACCGGT	1 cut(s)	1360
PkrI	GCNGC	8 cut(s)	41, 582, 965, 1099, 1212, 1215, 1603, 1729
PleI	GAGTC	5 cut(s)	64, 199, 1520, 1553, 1716
PpsI	GAGTC	5 cut(s)	64, 199, 1520, 1553, 1716
PscI	ACATGT	1 cut(s)	709
PsiI	TTATAA	1 cut(s)	918
Psp6I	CCWGG	3 cut(s)	828, 835, 897
PspEI	GGTNACC	1 cut(s)	1050
PspGI	CCWGG	3 cut(s)	828, 835, 897
PspN4I	GGNNCC	3 cut(s)	628, 834, 903
PspPI	GGNCC	3 cut(s)	728, 826, 901
PspXI	VCTCGAGB	1 cut(s)	646
PstI	CTGCAG	1 cut(s)	397
PsuI	RGATCY	2 cut(s)	1255, 1267
RsaI	GTAC	2 cut(s)	716, 1073
RsaNI	GTAC	2 cut(s)	715, 1072
RseI	CAYNNNNRTG	1 cut(s)	599
SaqAI	TTAA	3 cut(s)	522, 1146, 1766
SatI	GCNGC	8 cut(s)	40, 581, 964, 1098, 1211, 1214, 1602, 1728
Sau3AI	GATC	7 cut(s)	60, 636, 754, 799, 1255, 1267, 1510
Sau96I	GGNCC	3 cut(s)	728, 826, 901
SchI	GAGTC	5 cut(s)	64, 200, 1520, 1553, 1717
ScrFI	CCNGG	3 cut(s)	830, 837, 899
SduI	GDGCHC	1 cut(s)	499
SfaNI	GCATC	2 cut(s)	781, 1672
SfcI	CTRYAG	2 cut(s)	393, 1749
Sfr274I	CTCGAG	1 cut(s)	646
SinI	GGWCC	2 cut(s)	826, 901
SlaI	CTCGAG	1 cut(s)	646
SmiMI	CAYNNNNRTG	1 cut(s)	599
SmlI	CTYRAG	2 cut(s)	646, 1305
SmoI	CTYRAG	2 cut(s)	646, 1305
SseBI	AGGCCT	1 cut(s)	1009
SsiI	CCGC	5 cut(s)	173, 240, 670, 1214, 1705
SspI	AATATT	2 cut(s)	1369, 1780
SspMI	CTAG	3 cut(s)	996, 1290, 1569
StuI	AGGCCT	1 cut(s)	1009
StyD4I	CCNGG	3 cut(s)	828, 835, 897
StyI	CCWWGG	1 cut(s)	1125
TaaI	ACNGT	3 cut(s)	980, 1623, 1753
TaqI	TCGA	2 cut(s)	63, 647
TatI	WGTACW	1 cut(s)	714
TauI	GCSGC	1 cut(s)	1216
TfiI	GAWTC	6 cut(s)	263, 334, 679, 851, 1043, 1310
Tru1I	TTAA	3 cut(s)	522, 1146, 1766
Tru9I	TTAA	3 cut(s)	522, 1146, 1766
TscAI	CASTG	5 cut(s)	738, 985, 1626, 1683, 1699
TseFI	GTSAC	2 cut(s)	980, 1050
TseI	GCWGC	7 cut(s)	39, 580, 963, 1097, 1210, 1601, 1727
Tsp45I	GTSAC	2 cut(s)	980, 1050
TspDTI	ATGAA	5 cut(s)	148, 291, 450, 891, 945
TspGWI	ACGGA	2 cut(s)	1418, 1433
TspRI	CASTG	5 cut(s)	738, 985, 1626, 1683, 1699
Van91I	CCANNNNNTGG	1 cut(s)	1061
VneI	GTGCAC	1 cut(s)	495
VpaK11BI	GGWCC	2 cut(s)	826, 901
XapI	RAATTY	6 cut(s)	155, 294, 1104, 1142, 1176, 1381
XceI	RCATGY	2 cut(s)	33, 713
XhoI	CTCGAG	1 cut(s)	646
XspI	CTAG	3 cut(s)	996, 1290, 1569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.