transcription regulatory region sequence-specific DNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g11353 FvH4_4g19210 FvH4_5g29232 |
| malus_domestica | MD05G1049100.v1.1 MD05G1049400.v1.1 MD06G1163200.v1.1 MD09G1074000.v1.1 MD09G1075200.v1.1 MD10G1055900.v1.1 MD10G1306300.v1.1 |
| prunus_persica | Prupe.1G531300_v2.0.a1 Prupe.1G531500_v2.0.a1 Prupe.1G538700_v2.0.a1 |
| pyrus_communis | pycom08g16930 pycom09g00120 pycom15g27670 |
| rosa_chinensis | RchiOBHm_Chr6g0270001 RchiOBHm_Chr7g0233561 |
| rosa_multiflora | Rmu_sc0002409.1_g000001 Rmu_sc0008851.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00227180 Rroxscaffold_5G00351090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 42 |
| AcyI | GRCGYC | 1 cut(s) | 100 |
| AjnI | CCWGG | 1 cut(s) | 77 |
| AluBI | AGCT | 3 cut(s) | 26, 58, 75 |
| AluI | AGCT | 3 cut(s) | 26, 58, 75 |
| BciT130I | CCWGG | 1 cut(s) | 79 |
| BfaI | CTAG | 1 cut(s) | 104 |
| Bme1390I | CCNGG | 1 cut(s) | 79 |
| BmrFI | CCNGG | 1 cut(s) | 79 |
| BpmI | CTGGAG | 1 cut(s) | 61 |
| BpuEI | CTTGAG | 1 cut(s) | 55 |
| BsaHI | GRCGYC | 1 cut(s) | 100 |
| Bse1I | ACTGG | 1 cut(s) | 55 |
| BseBI | CCWGG | 1 cut(s) | 79 |
| BseNI | ACTGG | 1 cut(s) | 55 |
| BsrI | ACTGG | 1 cut(s) | 55 |
| BssNI | GRCGYC | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 1 cut(s) | 79 |
| BstACI | GRCGYC | 1 cut(s) | 100 |
| BstC8I | GCNNGC | 1 cut(s) | 56 |
| BstNI | CCWGG | 1 cut(s) | 79 |
| BstSCI | CCNGG | 1 cut(s) | 77 |
| Cac8I | GCNNGC | 1 cut(s) | 56 |
| CseI | GACGC | 1 cut(s) | 89 |
| CviAII | CATG | 1 cut(s) | 128 |
| CviJI | RGCY | 3 cut(s) | 26, 58, 75 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 58, 75 |
| Eco57I | CTGAAG | 1 cut(s) | 42 |
| EcoRII | CCWGG | 1 cut(s) | 77 |
| FaeI | CATG | 1 cut(s) | 131 |
| FaiI | YATR | 3 cut(s) | 84, 93, 129 |
| FatI | CATG | 1 cut(s) | 127 |
| FspBI | CTAG | 1 cut(s) | 104 |
| FspEI | CC | 9 cut(s) | 36, 64, 69, 74, 78, 79, 82, 91, 127 |
| GsuI | CTGGAG | 1 cut(s) | 61 |
| HgaI | GACGC | 1 cut(s) | 89 |
| Hin1I | GRCGYC | 1 cut(s) | 100 |
| Hin1II | CATG | 1 cut(s) | 131 |
| HinfI | GANTC | 2 cut(s) | 7, 17 |
| Hpy188I | TCNGA | 1 cut(s) | 22 |
| Hpy188III | TCNNGA | 1 cut(s) | 104 |
| Hsp92I | GRCGYC | 1 cut(s) | 100 |
| Hsp92II | CATG | 1 cut(s) | 131 |
| LmnI | GCTCC | 2 cut(s) | 63, 80 |
| LpnPI | CCDG | 3 cut(s) | 36, 64, 91 |
| MaeI | CTAG | 1 cut(s) | 104 |
| MboII | GAAGA | 1 cut(s) | 116 |
| MnlI | CCTC | 1 cut(s) | 90 |
| MseI | TTAA | 1 cut(s) | 133 |
| MspR9I | CCNGG | 1 cut(s) | 79 |
| MvaI | CCWGG | 1 cut(s) | 79 |
| NlaIII | CATG | 1 cut(s) | 131 |
| PfeI | GAWTC | 2 cut(s) | 7, 17 |
| Psp6I | CCWGG | 1 cut(s) | 77 |
| PspGI | CCWGG | 1 cut(s) | 77 |
| SaqAI | TTAA | 1 cut(s) | 133 |
| ScrFI | CCNGG | 1 cut(s) | 79 |
| SetI | ASST | 4 cut(s) | 28, 60, 77, 83 |
| SgeI | CNNG | 7 cut(s) | 63, 67, 74, 84, 90, 91, 116 |
| SmlI | CTYRAG | 1 cut(s) | 70 |
| SmoI | CTYRAG | 1 cut(s) | 70 |
| SspMI | CTAG | 1 cut(s) | 104 |
| StyD4I | CCNGG | 1 cut(s) | 77 |
| TaqI | TCGA | 1 cut(s) | 5 |
| TfiI | GAWTC | 2 cut(s) | 7, 17 |
| Tru1I | TTAA | 1 cut(s) | 133 |
| Tru9I | TTAA | 1 cut(s) | 133 |
| TspDTI | ATGAA | 1 cut(s) | 116 |
| XbaI | TCTAGA | 1 cut(s) | 103 |
| XspI | CTAG | 1 cut(s) | 104 |