Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0002805

Physical Location & Seq

Genomic Coordinates Forward (+)

7459754 .. 7475669

Gene Structure 15916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1077800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGCAAGGGCTTTCTCCGACCACCCGTTCCGGCAGTTCTGAACCGGAAGACTTGACTAAAACCGATAAGAGAAGTAAAGGAAGCAGACGATATGTTCCGCAGAAGAATTCCGTGGCGTATGCATTGTTAATCACACTTTACCGGGGACTTGAAAATGGGAATGAATTTATGCGTAAACAGGAGCTTATCGATGCAGCTGAAGCGAGTGGACTTTCTCATGTGCCTATTATGCCAGAGATGGGAAAGGGAAAACCGGGAGGTCCAGGACGCTTTGCGGGTTCTGGAAGGGAATGGTATAGTGGATGGTCCTGCATGAAGACCTTGGTAACCAAGGGGCTAGTTACAAAATCAAGCTGCCCTGCAAAGTACATGCTTACTGAAGAAGGTCAAGAAGCTGCACGTGAATGTCTAACCAGGTCTGGTATGGCAGGTCCTGTCAGAAAAACTGCTAATGCCAAAGGGCTTTCTGTTCTGGATGTGGATACTACTTCACATCAGGAGCTTGATCATTCTGACTCTGGGGAAGACGTCATATTGTTATCAACTAATGTGACTAGGAAGAAGAATTCGCTTGATATTCCAGAGGAATACATCGGGAAGAGTTATCCTGTGCCAAAGTCTACTTTGGATGGTTTTGAAGCAAGTCGGAATGTTTTCTCATTGCCACCTCTAAGCTTTGGGGAGAGATTTGAAGATGCATATGAAGTAATCTTGGTTTTGGATGATCGAGAGCAATTTGCCACTAGGGGATCGCGGCCTGGAAGAATTATTGAGAATGTTCGCACTCAATTCAAAATCAAAATAGAGGTTAGAAGGTTACCGGTTGGAGATGGAATCTGGATAGCTCGCCATAAACATCTTCATAGTGAATACGTGCTTGATTTTATAGTTGAGAGGAAGAAAGTTGATGATTTGCGCTGTTCAATCAGAGATAACCGTTACAGGGACCAAAAATTGAGGCTTTTGAGATGTGGTCTTAAGAAGCTGATATATCTTGTGGAAGGTGATCCAAATTGTTCTGAAGCAGCGGAAAGCATTAAAACAACCTGTTTCACAACTGAAATTTTGGAGGGATTCGATGTTCAAAGAACCAGTGGCTTGGCTGATACACTGAAGAAGTATGTTCATCTTACTCAAGCGATAACTCAGTATTACAAATCAGAGTATTTGGAGGAACAAAGTATAAATGCTGGGGTTTGCCCTTCTTTTGATGAGTTTATCAAAAGGTGCCAAGACCTGGATAAAATGACAGTTAGTGACATATTTGCCATTCAGCTCATGCAGGTACCCCAGGTAACCGAGGAAGTTGCCATAGCTGTTCTGGATTTGTACCCCACGCTTTTATCTCTTGCCCGTGCCTACTCTCGACTTGAAGGCGACGTCGATGCACAAGAGAAGATGCTTAAAACGCAGAGTTACAACGTTGTCAATGCAGGTGCTAGTAAAAATATATTTCAATTCGTATGGGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000280 GO:0000712 GO:0000724 GO:0000725 GO:0000727 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007093 GO:0007095 GO:0007127 GO:0007129 GO:0007131 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0016043 GO:0016787 GO:0016788 GO:0016889 GO:0016894 GO:0022402 GO:0022414 GO:0022607 GO:0031297 GO:0031570 GO:0031572 GO:0031573 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044773 GO:0044774 GO:0044818 GO:0045005 GO:0045132 GO:0045143 GO:0045786 GO:0045930 GO:0046483 GO:0048256 GO:0048257 GO:0048285 GO:0048476 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051026 GO:0051276 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0051726 GO:0061982 GO:0065007 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901576 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902749 GO:1902750 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

ERCC4

Protein Analysis

492

Amino Acids

55.11

Weight (kDa)

7.52

Isoelectric Point (pI)

42.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_MUS81	PF21136	33 - 133	5e-10	Crossover junction endonuclease MUS81-like, winged helix domain
ERCC4	PF02732	241 - 372	1.1e-22	ERCC4 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30870
fragaria_vesca	FvH4_7g02220 FvH4_7g02220 FvH4_7g02220 FvH4_7g02220 FvH4_7g02220
malus_domestica	MD02G1296200.v1.1 MD07G1077800.v1.1
prunus_persica	Prupe.2G028500_v2.0.a1 Prupe.2G028500_v2.0.a1 Prupe.2G028500_v2.0.a1 Prupe.2G032400_v2.0.a1 Prupe.2G099800_v2.0.a1 Prupe.7G020900_v2.0.a1 Prupe.7G020900_v2.0.a1 Prupe.7G020900_v2.0.a1
pyrus_communis	pycom02g24920 pycom07g06150
rosa_chinensis	RchiOBHm_Chr1g0319541 RchiOBHm_Chr3g0488831
rosa_laevigata	RLG00000013988 RLG00000022919 RLG00000030474
rosa_multiflora	Rmu_co8493915.1_g000001 Rmu_sc0001208.1_g000040
rosa_roxburghii	Rroxscaffold_4G00328300 Rroxscaffold_6G00393830
rosa_rugosa	Rorug01G0028100 Rorug03G0241800
rosa_samantha	Rh1AG040200 Rh1BG037300 Rh1CG041200 Rh1DG028700 Rh3AG289900 Rh3BG327000 Rh3CG324400 Rh3DG322900
rosa_wichuraiana	Rw1G003310 Rw3G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1424
AatII	GACGTC	2 cut(s)	531, 1383
Acc36I	ACCTGC	3 cut(s)	419, 1273, 1424
Acc65I	GGTACC	1 cut(s)	1285
AccB1I	GGYRCC	2 cut(s)	1227, 1285
AccB7I	CCANNNNNTGG	1 cut(s)	1237
AccI	GTMKAC	1 cut(s)	620
AccII	CGCG	1 cut(s)	754
AciI	CCGC	4 cut(s)	98, 275, 754, 1028
AclI	AACGTT	1 cut(s)	1422
AclWI	GGATC	2 cut(s)	757, 1001
AcsI	RAATTY	4 cut(s)	106, 164, 565, 1062
AcuI	CTGAAG	4 cut(s)	219, 399, 1041, 1133
AcvI	CACGTG	1 cut(s)	401
AcyI	GRCGYC	2 cut(s)	528, 1380
AfaI	GTAC	3 cut(s)	368, 1287, 1331
AfiI	CCNNNNNNNGG	3 cut(s)	239, 943, 1237
AflII	CTTAAG	1 cut(s)	977
AgeI	ACCGGT	1 cut(s)	820
AgsI	TTSAA	8 cut(s)	152, 638, 692, 793, 924, 1085, 1373, 1457
AjnI	CCWGG	5 cut(s)	262, 413, 757, 1236, 1290
AloI	GAACNNNNNNTCC	2 cut(s)	1065, 1097
AlwI	GGATC	2 cut(s)	757, 1001
AlwNI	CAGNNNCTG	1 cut(s)	434
AoxI	GGCC	1 cut(s)	755
ApeKI	GCWGC	4 cut(s)	194, 354, 395, 1025
ApoI	RAATTY	4 cut(s)	106, 164, 565, 1062
AsiGI	ACCGGT	1 cut(s)	820
Asp700I	GAANNNNTTC	1 cut(s)	653
Asp718I	GGTACC	1 cut(s)	1285
AspLEI	GCGC	1 cut(s)	918
AspS9I	GGNCC	4 cut(s)	260, 306, 431, 946
AsuC2I	CCSGG	2 cut(s)	143, 255
AsuHPI	GGTGA	1 cut(s)	1016
AvaII	GGWCC	4 cut(s)	260, 306, 431, 946
BanI	GGYRCC	2 cut(s)	1227, 1285
BbrPI	CACGTG	1 cut(s)	401
BbsI	GAAGAC	3 cut(s)	54, 323, 531
BbvI	GCAGC	4 cut(s)	206, 341, 382, 1037
BccI	CCATC	4 cut(s)	232, 297, 623, 824
BcgI	CGANNNNNNTGC	4 cut(s)	1289, 1323, 1367, 1401
BciT130I	CCWGG	5 cut(s)	264, 415, 759, 1238, 1292
BciVI	GTATCC	1 cut(s)	475
BclI	TGATCA	1 cut(s)	505
BcnI	CCSGG	2 cut(s)	143, 255
BfaI	CTAG	4 cut(s)	338, 555, 744, 1440
BfrI	CTTAAG	1 cut(s)	977
BfuAI	ACCTGC	3 cut(s)	419, 1273, 1424
BfuI	GTATCC	1 cut(s)	475
BisI	GCNGC	5 cut(s)	195, 355, 396, 755, 1026
BlsI	GCNGC	5 cut(s)	196, 356, 397, 756, 1027
Bme1390I	CCNGG	7 cut(s)	143, 255, 264, 415, 759, 1238, 1292
Bme18I	GGWCC	4 cut(s)	260, 306, 431, 946
BmgT120I	GGNCC	4 cut(s)	260, 306, 431, 946
BmiI	GGNNCC	3 cut(s)	947, 1229, 1287
BmrFI	CCNGG	7 cut(s)	143, 255, 264, 415, 759, 1238, 1292
BmsI	GCATC	4 cut(s)	181, 685, 1375, 1389
BpiI	GAAGAC	3 cut(s)	54, 323, 531
BpuEI	CTTGAG	1 cut(s)	1119
BpuMI	CCSGG	2 cut(s)	143, 255
Bsa29I	ATCGAT	1 cut(s)	189
BsaAI	YACGTR	2 cut(s)	401, 874
BsaHI	GRCGYC	2 cut(s)	528, 1380
BsaJI	CCNNGG	6 cut(s)	111, 142, 321, 330, 1290, 1299
BsaWI	WCCGGW	2 cut(s)	43, 820
Bsc4I	CCNNNNNNNGG	3 cut(s)	239, 943, 1237
Bse118I	RCCGGY	1 cut(s)	820
Bse1I	ACTGG	1 cut(s)	1092
Bse3DI	GCAATG	1 cut(s)	659
BseBI	CCWGG	5 cut(s)	264, 415, 759, 1238, 1292
BseCI	ATCGAT	1 cut(s)	189
BseDI	CCNNGG	6 cut(s)	111, 142, 321, 330, 1290, 1299
BseGI	GGATG	4 cut(s)	308, 481, 634, 727
BseLI	CCNNNNNNNGG	3 cut(s)	239, 943, 1237
BseMI	GCAATG	1 cut(s)	659
BseMII	CTCAG	1 cut(s)	1160
BseNI	ACTGG	1 cut(s)	1092
BseXI	GCAGC	4 cut(s)	206, 341, 382, 1037
BseYI	CCCAGC	1 cut(s)	1190
BsgI	GTGCAG	1 cut(s)	381
Bsh1236I	CGCG	1 cut(s)	754
BshFI	GGCC	1 cut(s)	757
BshNI	GGYRCC	2 cut(s)	1227, 1285
BshTI	ACCGGT	1 cut(s)	820
BshVI	ATCGAT	1 cut(s)	189
BsiSI	CCGG	5 cut(s)	30, 44, 142, 254, 821
BslFI	GGGAC	2 cut(s)	159, 959
BslI	CCNNNNNNNGG	3 cut(s)	239, 943, 1237
BsmFI	GGGAC	2 cut(s)	159, 959
BsnI	GGCC	1 cut(s)	757
Bsp143I	GATC	4 cut(s)	505, 724, 749, 1006
BspACI	CCGC	4 cut(s)	98, 275, 754, 1028
BspANI	GGCC	1 cut(s)	757
BspCNI	CTCAG	1 cut(s)	1159
BspDI	ATCGAT	1 cut(s)	189
BspFNI	CGCG	1 cut(s)	754
BspLI	GGNNCC	3 cut(s)	947, 1229, 1287
BspMI	ACCTGC	3 cut(s)	419, 1273, 1424
BspPI	GGATC	2 cut(s)	757, 1001
BspT107I	GGYRCC	2 cut(s)	1227, 1285
BspTI	CTTAAG	1 cut(s)	977
BsrDI	GCAATG	1 cut(s)	659
BsrFI	RCCGGY	1 cut(s)	820
BsrI	ACTGG	1 cut(s)	1092
BssAI	RCCGGY	1 cut(s)	820
BssECI	CCNNGG	6 cut(s)	111, 142, 321, 330, 1290, 1299
BssMI	GATC	4 cut(s)	505, 724, 749, 1006
BssNI	GRCGYC	2 cut(s)	528, 1380
BssT1I	CCWWGG	2 cut(s)	321, 330
Bst2UI	CCWGG	5 cut(s)	264, 415, 759, 1238, 1292
Bst4CI	ACNGT	2 cut(s)	938, 1252
Bst6I	CTCTTC	1 cut(s)	593
BstACI	GRCGYC	2 cut(s)	528, 1380
BstAFI	CTTAAG	1 cut(s)	977
BstBAI	YACGTR	2 cut(s)	401, 874
BstC8I	GCNNGC	1 cut(s)	847
BstDEI	CTNAG	2 cut(s)	671, 1146
BstDSI	CCRYGG	1 cut(s)	111
BstEII	GGTNACC	3 cut(s)	325, 816, 1294
BstF5I	GGATG	4 cut(s)	308, 481, 634, 727
BstFNI	CGCG	1 cut(s)	754
BstHHI	GCGC	1 cut(s)	918
BstKTI	GATC	4 cut(s)	508, 727, 752, 1009
BstMBI	GATC	4 cut(s)	505, 724, 749, 1006
BstMWI	GCNNNNNNNGC	3 cut(s)	200, 229, 1408
BstNI	CCWGG	5 cut(s)	264, 415, 759, 1238, 1292
BstNSI	RCATGY	1 cut(s)	373
BstPI	GGTNACC	3 cut(s)	325, 816, 1294
BstSCI	CCNGG	7 cut(s)	141, 253, 262, 413, 757, 1236, 1290
BstUI	CGCG	1 cut(s)	754
BstV1I	GCAGC	4 cut(s)	206, 341, 382, 1037
BstV2I	GAAGAC	3 cut(s)	54, 323, 531
BstXI	CCANNNNNNTGG	1 cut(s)	1099
Bsu15I	ATCGAT	1 cut(s)	189
BsuI	GTATCC	1 cut(s)	475
BsuRI	GGCC	1 cut(s)	757
BsuTUI	ATCGAT	1 cut(s)	189
BtgI	CCRYGG	1 cut(s)	111
BtsCI	GGATG	4 cut(s)	308, 481, 634, 727
BtsIMutI	CAGTG	2 cut(s)	1099, 1109
BveI	ACCTGC	3 cut(s)	419, 1273, 1424
Cac8I	GCNNGC	1 cut(s)	847
CaiI	CAGNNNCTG	1 cut(s)	434
CfoI	GCGC	1 cut(s)	918
Cfr10I	RCCGGY	1 cut(s)	820
Cfr13I	GGNCC	4 cut(s)	260, 306, 431, 946
ClaI	ATCGAT	1 cut(s)	189
CseI	GACGC	1 cut(s)	276
CsiI	ACCWGGT	1 cut(s)	413
Csp6I	GTAC	3 cut(s)	367, 1286, 1330
CspAI	ACCGGT	1 cut(s)	820
CviAII	CATG	4 cut(s)	218, 313, 370, 1279
CviQI	GTAC	3 cut(s)	367, 1286, 1330
DdeI	CTNAG	2 cut(s)	671, 1146
DpnI	GATC	4 cut(s)	507, 726, 751, 1008
DpnII	GATC	4 cut(s)	505, 724, 749, 1006
Eam1104I	CTCTTC	1 cut(s)	593
EarI	CTCTTC	1 cut(s)	593
Eco130I	CCWWGG	2 cut(s)	321, 330
Eco47I	GGWCC	4 cut(s)	260, 306, 431, 946
Eco57I	CTGAAG	4 cut(s)	219, 399, 1041, 1133
Eco72I	CACGTG	1 cut(s)	401
Eco91I	GGTNACC	3 cut(s)	325, 816, 1294
EcoO109I	RGGNCCY	1 cut(s)	431
EcoO65I	GGTNACC	3 cut(s)	325, 816, 1294
EcoRI	GAATTC	2 cut(s)	106, 565
EcoRII	CCWGG	5 cut(s)	262, 413, 757, 1236, 1290
EcoT14I	CCWWGG	2 cut(s)	321, 330
EcoT22I	ATGCAT	2 cut(s)	124, 700
ErhI	CCWWGG	2 cut(s)	321, 330
FaeI	CATG	4 cut(s)	221, 316, 373, 1282
FaqI	GGGAC	2 cut(s)	159, 959
FatI	CATG	4 cut(s)	217, 312, 369, 1278
FauI	CCCGC	1 cut(s)	268
FauNDI	CATATG	1 cut(s)	700
FbaI	TGATCA	1 cut(s)	505
FblI	GTMKAC	1 cut(s)	620
Fnu4HI	GCNGC	5 cut(s)	195, 355, 396, 755, 1026
FokI	GGATG	4 cut(s)	315, 488, 641, 734
Fsp4HI	GCNGC	5 cut(s)	195, 355, 396, 755, 1026
FspBI	CTAG	4 cut(s)	338, 555, 744, 1440
GlaI	GCGC	1 cut(s)	917
GluI	GCNGC	5 cut(s)	195, 355, 396, 755, 1026
GsaI	CCCAGC	1 cut(s)	1194
HaeIII	GGCC	1 cut(s)	757
HapII	CCGG	5 cut(s)	30, 44, 142, 254, 821
HgaI	GACGC	1 cut(s)	276
HhaI	GCGC	1 cut(s)	918
Hin1I	GRCGYC	2 cut(s)	528, 1380
Hin1II	CATG	4 cut(s)	221, 316, 373, 1282
Hin6I	GCGC	1 cut(s)	916
HinP1I	GCGC	1 cut(s)	916
HindIII	AAGCTT	1 cut(s)	673
HinfI	GANTC	3 cut(s)	515, 834, 1074
HpaII	CCGG	5 cut(s)	30, 44, 142, 254, 821
HphI	GGTGA	1 cut(s)	1016
Hpy166II	GTNNAC	3 cut(s)	176, 209, 621
Hpy188I	TCNGA	8 cut(s)	18, 40, 440, 514, 648, 929, 1021, 1162
Hpy8I	GTNNAC	3 cut(s)	176, 209, 621
Hpy99I	CGWCG	2 cut(s)	1382, 1385
HpyAV	CCTTC	6 cut(s)	279, 377, 807, 995, 1212, 1367
HpyCH4III	ACNGT	2 cut(s)	938, 1252
HpyCH4IV	ACGT	5 cut(s)	400, 528, 873, 1380, 1422
HpyF10VI	GCNNNNNNNGC	3 cut(s)	200, 229, 1408
HpyF3I	CTNAG	2 cut(s)	671, 1146
HpySE526I	ACGT	5 cut(s)	400, 528, 873, 1380, 1422
Hsp92I	GRCGYC	2 cut(s)	528, 1380
Hsp92II	CATG	4 cut(s)	221, 316, 373, 1282
HspAI	GCGC	1 cut(s)	916
KpnI	GGTACC	1 cut(s)	1289
Ksp22I	TGATCA	1 cut(s)	505
Kzo9I	GATC	4 cut(s)	505, 724, 749, 1006
LmnI	GCTCC	2 cut(s)	181, 499
Lsp1109I	GCAGC	4 cut(s)	206, 341, 382, 1037
LweI	GCATC	4 cut(s)	181, 685, 1375, 1389
MabI	ACCWGGT	1 cut(s)	413
MaeI	CTAG	4 cut(s)	338, 555, 744, 1440
MaeII	ACGT	5 cut(s)	400, 528, 873, 1380, 1422
MaeIII	GTNAC	8 cut(s)	325, 340, 550, 816, 938, 1256, 1294, 1415
MalI	GATC	4 cut(s)	507, 726, 751, 1008
MboI	GATC	4 cut(s)	505, 724, 749, 1006
MlyI	GAGTC	1 cut(s)	509
MmeI	TCCRAC	3 cut(s)	41, 626, 805
MnlI	CCTC	9 cut(s)	251, 577, 678, 799, 888, 951, 1063, 1165, 1294
Mph1103I	ATGCAT	2 cut(s)	124, 700
MroXI	GAANNNNTTC	1 cut(s)	653
MseI	TTAA	4 cut(s)	128, 978, 1038, 1404
MslI	CAYNNNNRTG	1 cut(s)	403
MspA1I	CMGCKG	2 cut(s)	197, 1028
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	5 cut(s)	30, 44, 142, 254, 821
MspR9I	CCNGG	7 cut(s)	143, 255, 264, 415, 759, 1238, 1292
MvaI	CCWGG	5 cut(s)	264, 415, 759, 1238, 1292
MvnI	CGCG	1 cut(s)	754
MwoI	GCNNNNNNNGC	3 cut(s)	200, 229, 1408
NciI	CCSGG	2 cut(s)	143, 255
NdeI	CATATG	1 cut(s)	700
NdeII	GATC	4 cut(s)	505, 724, 749, 1006
NlaIII	CATG	4 cut(s)	221, 316, 373, 1282
NlaIV	GGNNCC	3 cut(s)	947, 1229, 1287
NmuCI	GTSAC	2 cut(s)	550, 1256
NsiI	ATGCAT	2 cut(s)	124, 700
NspI	RCATGY	1 cut(s)	373
PaqCI	CACCTGC	1 cut(s)	1424
PdmI	GAANNNNTTC	1 cut(s)	653
PfeI	GAWTC	2 cut(s)	834, 1074
PflMI	CCANNNNNTGG	1 cut(s)	1237
PfoI	TCCNGGA	1 cut(s)	262
PinAI	ACCGGT	1 cut(s)	820
PkrI	GCNGC	5 cut(s)	196, 356, 397, 756, 1027
PleI	GAGTC	1 cut(s)	509
PmaCI	CACGTG	1 cut(s)	401
PmlI	CACGTG	1 cut(s)	401
PpsI	GAGTC	1 cut(s)	509
Ppu21I	YACGTR	2 cut(s)	401, 874
PpuMI	RGGWCCY	1 cut(s)	431
Psp1406I	AACGTT	1 cut(s)	1422
Psp5II	RGGWCCY	1 cut(s)	431
Psp6I	CCWGG	5 cut(s)	262, 413, 757, 1236, 1290
PspCI	CACGTG	1 cut(s)	401
PspEI	GGTNACC	3 cut(s)	325, 816, 1294
PspFI	CCCAGC	1 cut(s)	1190
PspGI	CCWGG	5 cut(s)	262, 413, 757, 1236, 1290
PspN4I	GGNNCC	3 cut(s)	947, 1229, 1287
PspPI	GGNCC	4 cut(s)	260, 306, 431, 946
PspPPI	RGGWCCY	1 cut(s)	431
PstNI	CAGNNNCTG	1 cut(s)	434
PvuII	CAGCTG	1 cut(s)	197
RsaI	GTAC	3 cut(s)	368, 1287, 1331
RsaNI	GTAC	3 cut(s)	367, 1286, 1330
RseI	CAYNNNNRTG	1 cut(s)	403
SaqAI	TTAA	4 cut(s)	128, 978, 1038, 1404
SatI	GCNGC	5 cut(s)	195, 355, 396, 755, 1026
Sau3AI	GATC	4 cut(s)	505, 724, 749, 1006
Sau96I	GGNCC	4 cut(s)	260, 306, 431, 946
SchI	GAGTC	1 cut(s)	509
ScrFI	CCNGG	7 cut(s)	143, 255, 264, 415, 759, 1238, 1292
SexAI	ACCWGGT	1 cut(s)	413
SfaNI	GCATC	4 cut(s)	181, 685, 1375, 1389
SinI	GGWCC	4 cut(s)	260, 306, 431, 946
SmiMI	CAYNNNNRTG	1 cut(s)	403
SmlI	CTYRAG	2 cut(s)	977, 1134
SmoI	CTYRAG	2 cut(s)	977, 1134
SsiI	CCGC	4 cut(s)	98, 275, 754, 1028
SspMI	CTAG	4 cut(s)	338, 555, 744, 1440
StyD4I	CCNGG	7 cut(s)	141, 253, 262, 413, 757, 1236, 1290
StyI	CCWWGG	2 cut(s)	321, 330
TaaI	ACNGT	2 cut(s)	938, 1252
TaiI	ACGT	5 cut(s)	403, 531, 876, 1383, 1425
TaqI	TCGA	5 cut(s)	189, 727, 1077, 1366, 1383
TatI	WGTACW	1 cut(s)	366
TauI	GCSGC	1 cut(s)	757
TfiI	GAWTC	2 cut(s)	834, 1074
Tru1I	TTAA	4 cut(s)	128, 978, 1038, 1404
Tru9I	TTAA	4 cut(s)	128, 978, 1038, 1404
TscAI	CASTG	2 cut(s)	1099, 1116
TseFI	GTSAC	2 cut(s)	550, 1256
TseI	GCWGC	4 cut(s)	194, 354, 395, 1025
Tsp45I	GTSAC	2 cut(s)	550, 1256
TspDTI	ATGAA	5 cut(s)	177, 329, 717, 851, 1115
TspGWI	ACGGA	1 cut(s)	100
TspRI	CASTG	2 cut(s)	1099, 1116
Van91I	CCANNNNNTGG	1 cut(s)	1237
Vha464I	CTTAAG	1 cut(s)	977
VpaK11BI	GGWCC	4 cut(s)	260, 306, 431, 946
XapI	RAATTY	4 cut(s)	106, 164, 565, 1062
XceI	RCATGY	1 cut(s)	373
XcmI	CCANNNNNNNNNTGG	2 cut(s)	421, 1318
XmiI	GTMKAC	1 cut(s)	620
XmnI	GAANNNNTTC	1 cut(s)	653
XspI	CTAG	4 cut(s)	338, 555, 744, 1440
ZraI	GACGTC	2 cut(s)	529, 1381
Zsp2I	ATGCAT	2 cut(s)	124, 700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.