Crossover junction endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30870 |
| fragaria_vesca | FvH4_7g02220 FvH4_7g02220 FvH4_7g02220 FvH4_7g02220 FvH4_7g02220 |
| malus_domestica | MD02G1296200.v1.1 MD07G1077800.v1.1 |
| prunus_persica | Prupe.2G028500_v2.0.a1 Prupe.2G028500_v2.0.a1 Prupe.2G028500_v2.0.a1 Prupe.2G032400_v2.0.a1 Prupe.2G099800_v2.0.a1 Prupe.7G020900_v2.0.a1 Prupe.7G020900_v2.0.a1 Prupe.7G020900_v2.0.a1 |
| pyrus_communis | pycom02g24920 pycom07g06150 |
| rosa_chinensis | RchiOBHm_Chr1g0319541 RchiOBHm_Chr3g0488831 |
| rosa_laevigata | RLG00000013988 RLG00000022919 RLG00000030474 |
| rosa_multiflora | Rmu_co8493915.1_g000001 Rmu_sc0001208.1_g000040 |
| rosa_roxburghii | Rroxscaffold_4G00328300 Rroxscaffold_6G00393830 |
| rosa_rugosa | Rorug01G0028100 Rorug03G0241800 |
| rosa_samantha | Rh1AG040200 Rh1BG037300 Rh1CG041200 Rh1DG028700 Rh3AG289900 Rh3BG327000 Rh3CG324400 Rh3DG322900 |
| rosa_wichuraiana | Rw1G003310 Rw3G025690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1261 |
| AccII | CGCG | 1 cut(s) | 216 |
| AciI | CCGC | 2 cut(s) | 653, 1421 |
| AclWI | GGATC | 3 cut(s) | 745, 942, 989 |
| AcsI | RAATTY | 4 cut(s) | 103, 161, 1050, 1202 |
| AcuI | CTGAAG | 3 cut(s) | 216, 1029, 1121 |
| AcvI | CACGTG | 1 cut(s) | 389 |
| AfaI | GTAC | 6 cut(s) | 356, 578, 772, 864, 1154, 1319 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 236, 931 |
| AflII | CTTAAG | 1 cut(s) | 965 |
| AgeI | ACCGGT | 1 cut(s) | 20 |
| AgsI | TTSAA | 5 cut(s) | 428, 625, 680, 781, 912 |
| AjiI | CACGTC | 1 cut(s) | 1369 |
| AjnI | CCWGG | 2 cut(s) | 745, 1278 |
| AleI | CACNNNNGTG | 1 cut(s) | 536 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1053, 1085 |
| Alw26I | GTCTC | 4 cut(s) | 11, 401, 912, 940 |
| AlwI | GGATC | 3 cut(s) | 745, 942, 989 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 943 |
| Ama87I | CYCGRG | 1 cut(s) | 732 |
| ApeKI | GCWGC | 5 cut(s) | 30, 191, 383, 1013, 1373 |
| ApoI | RAATTY | 4 cut(s) | 103, 161, 1050, 1202 |
| AsiGI | ACCGGT | 1 cut(s) | 20 |
| AspS9I | GGNCC | 2 cut(s) | 294, 1273 |
| AsuC2I | CCSGG | 1 cut(s) | 1180 |
| AsuHPI | GGTGA | 1 cut(s) | 1376 |
| AsuII | TTCGAA | 1 cut(s) | 635 |
| AvaI | CYCGRG | 1 cut(s) | 732 |
| AvaII | GGWCC | 2 cut(s) | 294, 1273 |
| BbrPI | CACGTG | 1 cut(s) | 389 |
| BbsI | GAAGAC | 2 cut(s) | 51, 311 |
| BbvI | GCAGC | 5 cut(s) | 42, 203, 370, 1000, 1360 |
| BccI | CCATC | 3 cut(s) | 285, 611, 812 |
| BceAI | ACGGC | 1 cut(s) | 587 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 261, 295 |
| BciT130I | CCWGG | 2 cut(s) | 747, 1280 |
| BcnI | CCSGG | 1 cut(s) | 1180 |
| BcoDI | GTCTC | 4 cut(s) | 11, 401, 912, 940 |
| BfaI | CTAG | 2 cut(s) | 609, 1428 |
| BfmI | CTRYAG | 2 cut(s) | 108, 1014 |
| BfrI | CTTAAG | 1 cut(s) | 965 |
| BfuAI | ACCTGC | 1 cut(s) | 1261 |
| BisI | GCNGC | 6 cut(s) | 31, 192, 384, 653, 1014, 1374 |
| BlsI | GCNGC | 6 cut(s) | 32, 193, 385, 654, 1015, 1375 |
| BmcAI | AGTACT | 1 cut(s) | 1154 |
| Bme1390I | CCNGG | 3 cut(s) | 747, 1180, 1280 |
| Bme18I | GGWCC | 2 cut(s) | 294, 1273 |
| BmeT110I | CYCGRG | 1 cut(s) | 732 |
| BmgBI | CACGTC | 1 cut(s) | 1369 |
| BmgT120I | GGNCC | 2 cut(s) | 294, 1273 |
| BmiI | GGNNCC | 1 cut(s) | 1275 |
| BmrFI | CCNGG | 3 cut(s) | 747, 1180, 1280 |
| BmsI | GCATC | 3 cut(s) | 178, 673, 1377 |
| BpiI | GAAGAC | 2 cut(s) | 51, 311 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1300 |
| Bpu14I | TTCGAA | 1 cut(s) | 635 |
| BpuEI | CTTGAG | 3 cut(s) | 869, 1107, 1379 |
| BpuMI | CCSGG | 1 cut(s) | 1180 |
| Bsa29I | ATCGAT | 1 cut(s) | 186 |
| BsaAI | YACGTR | 1 cut(s) | 389 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 4 cut(s) | 318, 569, 746, 1278 |
| BsaWI | WCCGGW | 1 cut(s) | 20 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 236, 931 |
| Bse118I | RCCGGY | 1 cut(s) | 20 |
| Bse1I | ACTGG | 3 cut(s) | 330, 809, 1230 |
| BseBI | CCWGG | 2 cut(s) | 747, 1280 |
| BseCI | ATCGAT | 1 cut(s) | 186 |
| BseDI | CCNNGG | 4 cut(s) | 318, 569, 746, 1278 |
| BseGI | GGATG | 5 cut(s) | 296, 469, 496, 506, 715 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 236, 931 |
| BseMII | CTCAG | 5 cut(s) | 110, 497, 935, 1149, 1278 |
| BseNI | ACTGG | 3 cut(s) | 330, 809, 1230 |
| BseXI | GCAGC | 5 cut(s) | 42, 203, 370, 1000, 1360 |
| BseYI | CCCAGC | 1 cut(s) | 346 |
| BsgI | GTGCAG | 2 cut(s) | 369, 1359 |
| Bsh1236I | CGCG | 1 cut(s) | 216 |
| BshTI | ACCGGT | 1 cut(s) | 20 |
| BshVI | ATCGAT | 1 cut(s) | 186 |
| BsiHKCI | CYCGRG | 1 cut(s) | 732 |
| BsiSI | CCGG | 2 cut(s) | 21, 1179 |
| BslFI | GGGAC | 2 cut(s) | 336, 1259 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 236, 931 |
| BsmAI | GTCTC | 4 cut(s) | 11, 401, 912, 940 |
| BsmFI | GGGAC | 2 cut(s) | 336, 1259 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| BsoBI | CYCGRG | 1 cut(s) | 732 |
| Bsp119I | TTCGAA | 1 cut(s) | 635 |
| Bsp1407I | TGTACA | 1 cut(s) | 576 |
| Bsp143I | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| BspACI | CCGC | 2 cut(s) | 653, 1421 |
| BspCNI | CTCAG | 5 cut(s) | 109, 496, 936, 1150, 1279 |
| BspDI | ATCGAT | 1 cut(s) | 186 |
| BspFNI | CGCG | 1 cut(s) | 216 |
| BspHI | TCATGA | 1 cut(s) | 399 |
| BspLI | GGNNCC | 1 cut(s) | 1275 |
| BspMAI | CTGCAG | 1 cut(s) | 1018 |
| BspMI | ACCTGC | 1 cut(s) | 1261 |
| BspPI | GGATC | 3 cut(s) | 745, 942, 989 |
| BspT104I | TTCGAA | 1 cut(s) | 635 |
| BspTI | CTTAAG | 1 cut(s) | 965 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BsrFI | RCCGGY | 1 cut(s) | 20 |
| BsrGI | TGTACA | 1 cut(s) | 576 |
| BsrI | ACTGG | 3 cut(s) | 330, 809, 1230 |
| BssAI | RCCGGY | 1 cut(s) | 20 |
| BssECI | CCNNGG | 4 cut(s) | 318, 569, 746, 1278 |
| BssMI | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| BssT1I | CCWWGG | 1 cut(s) | 318 |
| Bst2UI | CCWGG | 2 cut(s) | 747, 1280 |
| Bst4CI | ACNGT | 2 cut(s) | 926, 1240 |
| Bst6I | CTCTTC | 1 cut(s) | 581 |
| BstAFI | CTTAAG | 1 cut(s) | 965 |
| BstAUI | TGTACA | 1 cut(s) | 576 |
| BstBAI | YACGTR | 1 cut(s) | 389 |
| BstBI | TTCGAA | 1 cut(s) | 635 |
| BstC8I | GCNNGC | 2 cut(s) | 218, 492 |
| BstDEI | CTNAG | 9 cut(s) | 96, 362, 483, 659, 944, 1158, 1287, 1300, 1391 |
| BstDSI | CCRYGG | 1 cut(s) | 569 |
| BstEII | GGTNACC | 1 cut(s) | 804 |
| BstF5I | GGATG | 5 cut(s) | 296, 469, 496, 506, 715 |
| BstFNI | CGCG | 1 cut(s) | 216 |
| BstKTI | GATC | 6 cut(s) | 614, 699, 715, 740, 937, 997 |
| BstMAI | GTCTC | 4 cut(s) | 11, 401, 912, 940 |
| BstMBI | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 197, 226 |
| BstNI | CCWGG | 2 cut(s) | 747, 1280 |
| BstNSI | RCATGY | 2 cut(s) | 361, 1178 |
| BstPI | GGTNACC | 1 cut(s) | 804 |
| BstSCI | CCNGG | 3 cut(s) | 745, 1178, 1278 |
| BstSFI | CTRYAG | 2 cut(s) | 108, 1014 |
| BstUI | CGCG | 1 cut(s) | 216 |
| BstV1I | GCAGC | 5 cut(s) | 42, 203, 370, 1000, 1360 |
| BstV2I | GAAGAC | 2 cut(s) | 51, 311 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 325, 1087 |
| Bsu15I | ATCGAT | 1 cut(s) | 186 |
| BsuTUI | ATCGAT | 1 cut(s) | 186 |
| BtgI | CCRYGG | 1 cut(s) | 569 |
| BtrI | CACGTC | 1 cut(s) | 1369 |
| BtsCI | GGATG | 5 cut(s) | 296, 469, 496, 506, 715 |
| BtsIMutI | CAGTG | 2 cut(s) | 1097, 1249 |
| BveI | ACCTGC | 1 cut(s) | 1261 |
| Cac8I | GCNNGC | 2 cut(s) | 218, 492 |
| CaiI | CAGNNNCTG | 1 cut(s) | 943 |
| CciI | TCATGA | 1 cut(s) | 399 |
| Cfr10I | RCCGGY | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 2 cut(s) | 294, 1273 |
| ClaI | ATCGAT | 1 cut(s) | 186 |
| CseI | GACGC | 2 cut(s) | 93, 264 |
| Csp6I | GTAC | 6 cut(s) | 355, 577, 771, 863, 1153, 1318 |
| CspAI | ACCGGT | 1 cut(s) | 20 |
| CviAII | CATG | 6 cut(s) | 301, 358, 400, 596, 1175, 1267 |
| CviQI | GTAC | 6 cut(s) | 355, 577, 771, 863, 1153, 1318 |
| DdeI | CTNAG | 9 cut(s) | 96, 362, 483, 659, 944, 1158, 1287, 1300, 1391 |
| DpnI | GATC | 6 cut(s) | 613, 698, 714, 739, 936, 996 |
| DpnII | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| Eam1104I | CTCTTC | 1 cut(s) | 581 |
| EarI | CTCTTC | 1 cut(s) | 581 |
| Eco130I | CCWWGG | 1 cut(s) | 318 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 2 cut(s) | 294, 1273 |
| Eco57I | CTGAAG | 3 cut(s) | 216, 1029, 1121 |
| Eco72I | CACGTG | 1 cut(s) | 389 |
| Eco88I | CYCGRG | 1 cut(s) | 732 |
| Eco91I | GGTNACC | 1 cut(s) | 804 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1273 |
| EcoO65I | GGTNACC | 1 cut(s) | 804 |
| EcoRI | GAATTC | 1 cut(s) | 103 |
| EcoRII | CCWGG | 2 cut(s) | 745, 1278 |
| EcoT14I | CCWWGG | 1 cut(s) | 318 |
| EcoT22I | ATGCAT | 1 cut(s) | 688 |
| ErhI | CCWWGG | 1 cut(s) | 318 |
| FaeI | CATG | 6 cut(s) | 304, 361, 403, 599, 1178, 1270 |
| FaqI | GGGAC | 2 cut(s) | 336, 1259 |
| FatI | CATG | 6 cut(s) | 300, 357, 399, 595, 1174, 1266 |
| FauI | CCCGC | 1 cut(s) | 1414 |
| FauNDI | CATATG | 1 cut(s) | 688 |
| Fnu4HI | GCNGC | 6 cut(s) | 31, 192, 384, 653, 1014, 1374 |
| FokI | GGATG | 5 cut(s) | 303, 476, 483, 493, 722 |
| Fsp4HI | GCNGC | 6 cut(s) | 31, 192, 384, 653, 1014, 1374 |
| FspBI | CTAG | 2 cut(s) | 609, 1428 |
| GluI | GCNGC | 6 cut(s) | 31, 192, 384, 653, 1014, 1374 |
| GsaI | CCCAGC | 1 cut(s) | 350 |
| HapII | CCGG | 2 cut(s) | 21, 1179 |
| HgaI | GACGC | 2 cut(s) | 93, 264 |
| Hin1II | CATG | 6 cut(s) | 304, 361, 403, 599, 1178, 1270 |
| HindIII | AAGCTT | 1 cut(s) | 661 |
| HinfI | GANTC | 4 cut(s) | 278, 503, 589, 822 |
| HpaII | CCGG | 2 cut(s) | 21, 1179 |
| HphI | GGTGA | 1 cut(s) | 1376 |
| Hpy166II | GTNNAC | 3 cut(s) | 173, 469, 962 |
| Hpy8I | GTNNAC | 3 cut(s) | 173, 469, 962 |
| HpyAV | CCTTC | 3 cut(s) | 229, 365, 983 |
| HpyCH4III | ACNGT | 2 cut(s) | 926, 1240 |
| HpyCH4IV | ACGT | 4 cut(s) | 388, 537, 904, 1368 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 197, 226 |
| HpyF3I | CTNAG | 9 cut(s) | 96, 362, 483, 659, 944, 1158, 1287, 1300, 1391 |
| HpySE526I | ACGT | 4 cut(s) | 388, 537, 904, 1368 |
| Hsp92II | CATG | 6 cut(s) | 304, 361, 403, 599, 1178, 1270 |
| Kzo9I | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| LmnI | GCTCC | 2 cut(s) | 178, 487 |
| Lsp1109I | GCAGC | 5 cut(s) | 42, 203, 370, 1000, 1360 |
| LweI | GCATC | 3 cut(s) | 178, 673, 1377 |
| MaeI | CTAG | 2 cut(s) | 609, 1428 |
| MaeII | ACGT | 4 cut(s) | 388, 537, 904, 1368 |
| MaeIII | GTNAC | 5 cut(s) | 313, 804, 926, 1282, 1364 |
| MalI | GATC | 6 cut(s) | 613, 698, 714, 739, 936, 996 |
| MboI | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| MfeI | CAATTG | 1 cut(s) | 1459 |
| MlyI | GAGTC | 3 cut(s) | 287, 497, 598 |
| MmeI | TCCRAC | 1 cut(s) | 793 |
| Mph1103I | ATGCAT | 1 cut(s) | 688 |
| MseI | TTAA | 3 cut(s) | 582, 966, 1026 |
| MslI | CAYNNNNRTG | 3 cut(s) | 391, 536, 1173 |
| MspA1I | CMGCKG | 1 cut(s) | 194 |
| MspCI | CTTAAG | 1 cut(s) | 965 |
| MspI | CCGG | 2 cut(s) | 21, 1179 |
| MspR9I | CCNGG | 3 cut(s) | 747, 1180, 1280 |
| MunI | CAATTG | 1 cut(s) | 1459 |
| MvaI | CCWGG | 2 cut(s) | 747, 1280 |
| MvnI | CGCG | 1 cut(s) | 216 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 197, 226 |
| NciI | CCSGG | 1 cut(s) | 1180 |
| NdeI | CATATG | 1 cut(s) | 688 |
| NdeII | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| NlaIII | CATG | 6 cut(s) | 304, 361, 403, 599, 1178, 1270 |
| NlaIV | GGNNCC | 1 cut(s) | 1275 |
| NmuCI | GTSAC | 1 cut(s) | 1364 |
| NsiI | ATGCAT | 1 cut(s) | 688 |
| NspI | RCATGY | 2 cut(s) | 361, 1178 |
| NspV | TTCGAA | 1 cut(s) | 635 |
| OliI | CACNNNNGTG | 1 cut(s) | 536 |
| PagI | TCATGA | 1 cut(s) | 399 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 739 |
| PfeI | GAWTC | 1 cut(s) | 822 |
| PinAI | ACCGGT | 1 cut(s) | 20 |
| PkrI | GCNGC | 6 cut(s) | 32, 193, 385, 654, 1015, 1375 |
| PleI | GAGTC | 3 cut(s) | 286, 497, 597 |
| PmaCI | CACGTG | 1 cut(s) | 389 |
| PmlI | CACGTG | 1 cut(s) | 389 |
| PpsI | GAGTC | 3 cut(s) | 286, 497, 597 |
| Ppu21I | YACGTR | 1 cut(s) | 389 |
| PpuMI | RGGWCCY | 1 cut(s) | 1273 |
| Psp5II | RGGWCCY | 1 cut(s) | 1273 |
| Psp6I | CCWGG | 2 cut(s) | 745, 1278 |
| PspCI | CACGTG | 1 cut(s) | 389 |
| PspEI | GGTNACC | 1 cut(s) | 804 |
| PspFI | CCCAGC | 1 cut(s) | 346 |
| PspGI | CCWGG | 2 cut(s) | 745, 1278 |
| PspN4I | GGNNCC | 1 cut(s) | 1275 |
| PspPI | GGNCC | 2 cut(s) | 294, 1273 |
| PspPPI | RGGWCCY | 1 cut(s) | 1273 |
| PstI | CTGCAG | 1 cut(s) | 1018 |
| PstNI | CAGNNNCTG | 1 cut(s) | 943 |
| PvuII | CAGCTG | 1 cut(s) | 194 |
| RsaI | GTAC | 6 cut(s) | 356, 578, 772, 864, 1154, 1319 |
| RsaNI | GTAC | 6 cut(s) | 355, 577, 771, 863, 1153, 1318 |
| RseI | CAYNNNNRTG | 3 cut(s) | 391, 536, 1173 |
| SaqAI | TTAA | 3 cut(s) | 582, 966, 1026 |
| SatI | GCNGC | 6 cut(s) | 31, 192, 384, 653, 1014, 1374 |
| Sau3AI | GATC | 6 cut(s) | 611, 696, 712, 737, 934, 994 |
| Sau96I | GGNCC | 2 cut(s) | 294, 1273 |
| ScaI | AGTACT | 1 cut(s) | 1154 |
| SchI | GAGTC | 3 cut(s) | 287, 497, 598 |
| ScrFI | CCNGG | 3 cut(s) | 747, 1180, 1280 |
| SfaNI | GCATC | 3 cut(s) | 178, 673, 1377 |
| SfcI | CTRYAG | 2 cut(s) | 108, 1014 |
| SfuI | TTCGAA | 1 cut(s) | 635 |
| SinI | GGWCC | 2 cut(s) | 294, 1273 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 391, 536, 1173 |
| SmlI | CTYRAG | 4 cut(s) | 848, 965, 1122, 1358 |
| SmoI | CTYRAG | 4 cut(s) | 848, 965, 1122, 1358 |
| SsiI | CCGC | 2 cut(s) | 653, 1421 |
| SspI | AATATT | 2 cut(s) | 475, 1438 |
| SspMI | CTAG | 2 cut(s) | 609, 1428 |
| StyD4I | CCNGG | 3 cut(s) | 745, 1178, 1278 |
| StyI | CCWWGG | 1 cut(s) | 318 |
| TaaI | ACNGT | 2 cut(s) | 926, 1240 |
| TaiI | ACGT | 4 cut(s) | 391, 540, 907, 1371 |
| TaqI | TCGA | 3 cut(s) | 186, 635, 715 |
| TatI | WGTACW | 4 cut(s) | 354, 576, 862, 1152 |
| TauI | GCSGC | 1 cut(s) | 655 |
| TfiI | GAWTC | 1 cut(s) | 822 |
| Tru1I | TTAA | 3 cut(s) | 582, 966, 1026 |
| Tru9I | TTAA | 3 cut(s) | 582, 966, 1026 |
| TscAI | CASTG | 2 cut(s) | 1104, 1249 |
| TseFI | GTSAC | 1 cut(s) | 1364 |
| TseI | GCWGC | 5 cut(s) | 30, 191, 383, 1013, 1373 |
| Tsp45I | GTSAC | 1 cut(s) | 1364 |
| TspDTI | ATGAA | 5 cut(s) | 174, 317, 468, 705, 1215 |
| TspRI | CASTG | 2 cut(s) | 1104, 1249 |
| Vha464I | CTTAAG | 1 cut(s) | 965 |
| VpaK11BI | GGWCC | 2 cut(s) | 294, 1273 |
| XapI | RAATTY | 4 cut(s) | 103, 161, 1050, 1202 |
| XbaI | TCTAGA | 1 cut(s) | 608 |
| XceI | RCATGY | 2 cut(s) | 361, 1178 |
| XspI | CTAG | 2 cut(s) | 609, 1428 |
| ZrmI | AGTACT | 1 cut(s) | 1154 |
| Zsp2I | ATGCAT | 1 cut(s) | 688 |