Prupe.2G028500_v2.0.a1

Crossover junction endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0002805
Physical Location & Seq
Forward (+)
2950220 .. 2963371
13152 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G028500.1

Sequence Viewer

Length: 2028 bp
ATGGAGCAGCAGAAGCGCATGGTGAGCAAGTGCCCGGAGAACGAAGAGCTCGCAGCGTACATGCTACGCAAGTGGCAGGAAATGGCCGAGCAAAAGCCTAAAGGCATCTCCGAGAACATCGAAATGACTCTTTCTAAGGCTTACTCCAATGTCTGCAACTCCAAGAACCCTATTAAAACCCTTAAAGAGTTTTCCCATATCAAGGGTGTGGGGAAGTGGATTCTGCGGCTTATGCAAGGGTTTTTTGAGACCGGTTCAAGCAGTTCTGAACCAGAAGACTTAACAAAAAAGGGTAAGAGAAACAAAGGAAGCAGGCGCTATCTTCCACAAAAGAATTCTGTGGCATATGCATTATTGATCACACTTTACAGGGGAACTGAAAATGGGAATGAATTTATGCGTAAACAGGAGCTTATTGATGCAGCTGAAGCAAGTGGACTTTCTCGTGTGCCAATTATGCCAGAGAAGGGAAAGGGAAAACTTGGACACTTTGCGAGTTCTGCAAAGGAATGGTATAGTGGATGGTCCTGCATGACAACATTGATAACCAAGGGACTGGCTGTGAAATCAAGTTGCCCCGCAAAGTACATGCTTACTGAAGAAGGTAAGGAAGCTGCACGTGAATGTCTCATGAGGTCTGGTTTGGCAGAGCCTATAGAACAATCTGCTAATGCCAAAGGGCCTTCTGTTCTGAATGTGGACAATATTTCACATCAGGGACTTGCTCATCCGGGCTCAGCCACAGAGGTGACATTGTTGCCCACTAATCTAAGTAGGCAGGAGAAACCGTTTGATATTCCACGGGAATACCTTGACAAGTTTATGCCCATGGGGTATTCTAAGGAACAGATTGTTCAGGCTTTTACTGAAGTTTCAGAAAGTTCCCTTGGCAAGGAAATGTCTTCACTATGGCCATCCGTTCTGTGTCGTCTTCGCGAAGAAGAAGTTTATGGTTTGCATTTGAAGTCTCAGACTTTAAGGAAAGATCTTTGTGCAGAACCAATCACTTACACGGTTGCAGATGGTCATAGAGATTGTGTAATGAGTGAGAATAGGCTGACCACCTCTTCTTGCGATGGTGGACATGTGGCGAAGATTAATTCTGACGAGCCAGTATCAAAGTCTTTTACGTTCAGAGCTTGTTCATCCTCTAGTCATCCTGTGCCAAAGCCTACTTCGGAAAATTATGAAGCAAGTTCGAGTGTTTTATCCATACCACCTCTAAGCTTTGGGGAGAGATTTGAGGATGCATATGAAGTAATCTTGGTATTGGATGATCGAGAACAATTTGCTACTCAGGGATCGCGGTCTAGGAGAATTATTGAGAATGTTCGTTCTCAATTCAAAATCAAAATAGAGGTTAGGAGGTTACCAGTTGGAGATGGAATCTGGATAGCTCGCCATAAGCATCTTGAGAGCGAATATGTACTTGATTTTATTGTTGAGAGGAAGAATGTCGATGACTTACGCAGTTCAATTAGAGACAACCGTTACAGGGATCAGAAATTGAGACTCTTGAGGTGCGGGCTGAAGAAACTGATATATCTTGTGGAAGGTGATCCAAATACTTCAGAAGCAGCAGAAAGCATTAAAACAGCCTGTTTCACAACTGAGATTTTGGAGGGATTTGATGTTCAGAGAACTATTGGCTTGGCTGATACATTGAAGAAGTATGTCTATCTTACTCAAGCAATAACTCAGTATTACAATTCAGAATTCTCTGAGGAACAATGTATACGTGCTGGGGTTTGTCCTCCTTTTGATGAATTTGTTAAAAGGTGCCAAGACCTGGATAAAATGACAGTCAGTGACGTTTTTGCCACTCAGCTCATGCAGGTCCCCCAGGTAACTGAGGACGTTGCCATAGCTGTTCTGGATTTGTACCCAACGCTTTTATCTCTTGCCCGTGCCTACTCTCTACTTGAGGGTGATGTCCGTGCACAAGAAGAGATGCTTAGAACCCAGAGTAACAATGCCGTCAATGTGGGTGCTAGTAAGAATATATTTCACTTGGTTTGGGGCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000280 GO:0000712 GO:0000724 GO:0000725 GO:0000727 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007093 GO:0007095 GO:0007127 GO:0007129 GO:0007131 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0016043 GO:0016787 GO:0016788 GO:0016889 GO:0016894 GO:0022402 GO:0022414 GO:0022607 GO:0031297 GO:0031570 GO:0031572 GO:0031573 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044773 GO:0044774 GO:0044818 GO:0045005 GO:0045132 GO:0045143 GO:0045786 GO:0045930 GO:0046483 GO:0048256 GO:0048257 GO:0048285 GO:0048476 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051026 GO:0051276 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0051726 GO:0061982 GO:0065007 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901576 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902749 GO:1902750 GO:1903046 GO:1903047
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 map03440 map03460
Pfam Domains
Protein Families
ERCC4

Protein Analysis

676

Amino Acids

76.03

Weight (kDa)

6.86

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1825
AccB1I GGYRCC 1 cut(s) 1779
AccB7I CCANNNNNTGG 1 cut(s) 1789
AccI GTMKAC 1 cut(s) 1735
AccII CGCG 2 cut(s) 936, 1306
AciI CCGC 4 cut(s) 226, 579, 1306, 1524
AclWI GGATC 3 cut(s) 1309, 1506, 1553
AcoI YGGCCR 2 cut(s) 84, 911
AcsI RAATTY 4 cut(s) 334, 392, 1715, 1766
AcuI CTGAAG 5 cut(s) 447, 618, 888, 1550, 1554
AcvI CACGTG 1 cut(s) 620
AfaI GTAC 4 cut(s) 59, 587, 1428, 1883
AfiI CCNNNNNNNGG 5 cut(s) 202, 467, 892, 1495, 1789
AflIII ACRYGT 1 cut(s) 1084
AgeI ACCGGT 1 cut(s) 251
AgsI TTSAA 5 cut(s) 258, 964, 1345, 1476, 1666
AjnI CCWGG 2 cut(s) 1788, 1842
AjuI GAANNNNNNNTTGG 4 cut(s) 870, 902, 1159, 1191
AleI CACNNNNGTG 1 cut(s) 746
AloI GAACNNNNNNTCC 2 cut(s) 1617, 1649
AluBI AGCT 9 cut(s) 49, 412, 425, 614, 1139, 1227, 1397, 1828, 1868
AluI AGCT 9 cut(s) 49, 412, 425, 614, 1139, 1227, 1397, 1828, 1868
Alw21I GWGCWC 2 cut(s) 51, 1942
Alw26I GTCTC 5 cut(s) 242, 632, 972, 1476, 1504
Alw44I GTGCAC 1 cut(s) 1938
AlwI GGATC 3 cut(s) 1309, 1506, 1553
AoxI GGCC 3 cut(s) 84, 680, 911
ApaLI GTGCAC 1 cut(s) 1938
ApeKI GCWGC 5 cut(s) 7, 53, 422, 614, 1577
ApoI RAATTY 4 cut(s) 334, 392, 1715, 1766
AseI ATTAAT 1 cut(s) 1098
AsiGI ACCGGT 1 cut(s) 251
AspLEI GCGC 2 cut(s) 18, 318
AspS9I GGNCC 3 cut(s) 525, 680, 1837
AsuC2I CCSGG 2 cut(s) 35, 732
AsuHPI GGTGA 4 cut(s) 34, 760, 1568, 1940
AvaII GGWCC 2 cut(s) 525, 1837
BaeGI GKGCMC 2 cut(s) 35, 1942
BalI TGGCCA 1 cut(s) 913
BanI GGYRCC 1 cut(s) 1779
BanII GRGCYC 2 cut(s) 51, 737
BauI CACGAG 1 cut(s) 444
BbrPI CACGTG 1 cut(s) 620
BbsI GAAGAC 3 cut(s) 282, 894, 923
Bbv12I GWGCWC 2 cut(s) 51, 1942
BbvI GCAGC 5 cut(s) 19, 65, 434, 601, 1589
BccI CCATC 5 cut(s) 516, 922, 1016, 1070, 1376
BceAI ACGGC 1 cut(s) 1961
BciT130I CCWGG 2 cut(s) 1790, 1844
BclI TGATCA 1 cut(s) 357
BcnI CCSGG 2 cut(s) 35, 732
BcoDI GTCTC 5 cut(s) 242, 632, 972, 1476, 1504
BfaI CTAG 3 cut(s) 1152, 1311, 1992
BfmI CTRYAG 1 cut(s) 654
BfoI RGCGCY 1 cut(s) 319
BfuAI ACCTGC 1 cut(s) 1825
BglII AGATCT 1 cut(s) 985
BisI GCNGC 6 cut(s) 8, 54, 227, 423, 615, 1578
BlpI GCTNAGC 1 cut(s) 736
BlsI GCNGC 6 cut(s) 9, 55, 228, 424, 616, 1579
Bme1390I CCNGG 4 cut(s) 35, 732, 1790, 1844
Bme18I GGWCC 2 cut(s) 525, 1837
BmgT120I GGNCC 3 cut(s) 525, 680, 1837
BmiI GGNNCC 2 cut(s) 1781, 1839
BmrFI CCNGG 4 cut(s) 35, 732, 1790, 1844
BmsI GCATC 5 cut(s) 114, 409, 1237, 1417, 1941
BpiI GAAGAC 3 cut(s) 282, 894, 923
Bpu1102I GCTNAGC 1 cut(s) 736
BpuEI CTTGAG 4 cut(s) 1433, 1537, 1671, 1943
BpuMI CCSGG 2 cut(s) 35, 732
BsaAI YACGTR 2 cut(s) 620, 1739
BsaI GGTCTC 1 cut(s) 242
BsaJI CCNNGG 5 cut(s) 549, 800, 828, 886, 1842
BsaWI WCCGGW 1 cut(s) 251
BsaXI ACNNNNNCTCC 2 cut(s) 773, 803
Bsc4I CCNNNNNNNGG 5 cut(s) 202, 467, 892, 1495, 1789
Bse118I RCCGGY 1 cut(s) 251
Bse1I ACTGG 3 cut(s) 561, 1112, 1373
BseBI CCWGG 2 cut(s) 1790, 1844
BseDI CCNNGG 5 cut(s) 549, 800, 828, 886, 1842
BseGI GGATG 7 cut(s) 527, 727, 914, 1145, 1156, 1252, 1279
BseLI CCNNNNNNNGG 5 cut(s) 202, 467, 892, 1495, 1789
BseMII CTCAG 8 cut(s) 750, 983, 1310, 1602, 1712, 1713, 1838, 1842
BseNI ACTGG 3 cut(s) 561, 1112, 1373
BseSI GKGCMC 2 cut(s) 35, 1942
BseXI GCAGC 5 cut(s) 19, 65, 434, 601, 1589
BseYI CCCAGC 1 cut(s) 1742
BsgI GTGCAG 2 cut(s) 600, 1014
Bsh1236I CGCG 2 cut(s) 936, 1306
BshFI GGCC 3 cut(s) 86, 682, 913
BshNI GGYRCC 1 cut(s) 1779
BshTI ACCGGT 1 cut(s) 251
BsiHKAI GWGCWC 2 cut(s) 51, 1942
BsiSI CCGG 3 cut(s) 35, 252, 731
BslFI GGGAC 3 cut(s) 567, 732, 1823
BslI CCNNNNNNNGG 5 cut(s) 202, 467, 892, 1495, 1789
BsmAI GTCTC 5 cut(s) 242, 632, 972, 1476, 1504
BsmFI GGGAC 3 cut(s) 567, 732, 1823
BsnI GGCC 3 cut(s) 86, 682, 913
Bso31I GGTCTC 1 cut(s) 242
Bsp1286I GDGCHC 4 cut(s) 35, 51, 737, 1942
Bsp143I GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
Bsp1720I GCTNAGC 1 cut(s) 736
Bsp19I CCATGG 1 cut(s) 828
Bsp68I TCGCGA 1 cut(s) 936
BspACI CCGC 4 cut(s) 226, 579, 1306, 1524
BspANI GGCC 3 cut(s) 86, 682, 913
BspCNI CTCAG 8 cut(s) 749, 982, 1309, 1603, 1711, 1714, 1837, 1843
BspFNI CGCG 2 cut(s) 936, 1306
BspHI TCATGA 1 cut(s) 630
BspLI GGNNCC 2 cut(s) 1781, 1839
BspMI ACCTGC 1 cut(s) 1825
BspPI GGATC 3 cut(s) 1309, 1506, 1553
BspQI GCTCTTC 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 1779
BspTNI GGTCTC 1 cut(s) 242
BsrFI RCCGGY 1 cut(s) 251
BsrI ACTGG 3 cut(s) 561, 1112, 1373
BssAI RCCGGY 1 cut(s) 251
BssECI CCNNGG 5 cut(s) 549, 800, 828, 886, 1842
BssMI GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
BssNAI GTATAC 1 cut(s) 1736
BssSI CACGAG 1 cut(s) 444
BssT1I CCWWGG 3 cut(s) 549, 828, 886
Bst1107I GTATAC 1 cut(s) 1736
Bst2BI CACGAG 1 cut(s) 444
Bst2UI CCWGG 2 cut(s) 1790, 1844
Bst4CI ACNGT 4 cut(s) 789, 1015, 1490, 1804
Bst6I CTCTTC 3 cut(s) 39, 1072, 1941
BstBAI YACGTR 2 cut(s) 620, 1739
BstC8I GCNNGC 4 cut(s) 51, 314, 1399, 1526
BstDSI CCRYGG 2 cut(s) 800, 828
BstEII GGTNACC 1 cut(s) 1368
BstENI CCTNNNNNAGG 1 cut(s) 890
BstF5I GGATG 7 cut(s) 527, 727, 914, 1145, 1156, 1252, 1279
BstFNI CGCG 2 cut(s) 936, 1306
BstH2I RGCGCY 1 cut(s) 319
BstHHI GCGC 2 cut(s) 18, 318
BstKTI GATC 6 cut(s) 360, 988, 1279, 1304, 1501, 1561
BstMAI GTCTC 5 cut(s) 242, 632, 972, 1476, 1504
BstMBI GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
BstMWI GCNNNNNNNGC 6 cut(s) 13, 24, 232, 428, 457, 500
BstNI CCWGG 2 cut(s) 1790, 1844
BstNSI RCATGY 3 cut(s) 64, 592, 1088
BstPI GGTNACC 1 cut(s) 1368
BstSCI CCNGG 4 cut(s) 33, 730, 1788, 1842
BstSFI CTRYAG 1 cut(s) 654
BstSLI GKGCMC 2 cut(s) 35, 1942
BstUI CGCG 2 cut(s) 936, 1306
BstV1I GCAGC 5 cut(s) 19, 65, 434, 601, 1589
BstV2I GAAGAC 3 cut(s) 282, 894, 923
BstX2I RGATCY 1 cut(s) 985
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 1 cut(s) 985
BstZ17I GTATAC 1 cut(s) 1736
BsuRI GGCC 3 cut(s) 86, 682, 913
BtgI CCRYGG 2 cut(s) 800, 828
BtgZI GCGATG 1 cut(s) 1089
BtsCI GGATG 7 cut(s) 527, 727, 914, 1145, 1156, 1252, 1279
BtsIMutI CAGTG 1 cut(s) 1813
BtuMI TCGCGA 1 cut(s) 936
BveI ACCTGC 1 cut(s) 1825
Cac8I GCNNGC 4 cut(s) 51, 314, 1399, 1526
CciI TCATGA 1 cut(s) 630
CfoI GCGC 2 cut(s) 18, 318
Cfr10I RCCGGY 1 cut(s) 251
Cfr13I GGNCC 3 cut(s) 525, 680, 1837
Csp6I GTAC 4 cut(s) 58, 586, 1427, 1882
CspAI ACCGGT 1 cut(s) 251
CviAII CATG 8 cut(s) 19, 61, 532, 589, 631, 829, 1085, 1831
CviQI GTAC 4 cut(s) 58, 586, 1427, 1882
DpnI GATC 6 cut(s) 359, 987, 1278, 1303, 1500, 1560
DpnII GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
EaeI YGGCCR 2 cut(s) 84, 911
Eam1104I CTCTTC 3 cut(s) 39, 1072, 1941
EarI CTCTTC 3 cut(s) 39, 1072, 1941
Ecl136II GAGCTC 1 cut(s) 49
Eco130I CCWWGG 3 cut(s) 549, 828, 886
Eco24I GRGCYC 2 cut(s) 51, 737
Eco31I GGTCTC 1 cut(s) 242
Eco47I GGWCC 2 cut(s) 525, 1837
Eco53kI GAGCTC 1 cut(s) 49
Eco57I CTGAAG 5 cut(s) 447, 618, 888, 1550, 1554
Eco72I CACGTG 1 cut(s) 620
Eco91I GGTNACC 1 cut(s) 1368
EcoICRI GAGCTC 1 cut(s) 49
EcoNI CCTNNNNNAGG 1 cut(s) 890
EcoO109I RGGNCCY 2 cut(s) 680, 1837
EcoO65I GGTNACC 1 cut(s) 1368
EcoRI GAATTC 2 cut(s) 334, 1715
EcoRII CCWGG 2 cut(s) 1788, 1842
EcoT14I CCWWGG 3 cut(s) 549, 828, 886
EcoT22I ATGCAT 2 cut(s) 352, 1252
EcoT38I GRGCYC 2 cut(s) 51, 737
ErhI CCWWGG 3 cut(s) 549, 828, 886
FaeI CATG 8 cut(s) 22, 64, 535, 592, 634, 832, 1088, 1834
FalI AAGNNNNNCTT 2 cut(s) 1938, 1970
FaqI GGGAC 3 cut(s) 567, 732, 1823
FatI CATG 8 cut(s) 18, 60, 531, 588, 630, 828, 1084, 1830
FauI CCCGC 2 cut(s) 586, 1517
FauNDI CATATG 2 cut(s) 346, 1252
FbaI TGATCA 1 cut(s) 357
FblI GTMKAC 1 cut(s) 1735
Fnu4HI GCNGC 6 cut(s) 8, 54, 227, 423, 615, 1578
FokI GGATG 7 cut(s) 534, 714, 901, 1132, 1143, 1259, 1286
FriOI GRGCYC 2 cut(s) 51, 737
Fsp4HI GCNGC 6 cut(s) 8, 54, 227, 423, 615, 1578
FspBI CTAG 3 cut(s) 1152, 1311, 1992
GlaI GCGC 2 cut(s) 17, 317
GluI GCNGC 6 cut(s) 8, 54, 227, 423, 615, 1578
GsaI CCCAGC 1 cut(s) 1746
HaeII RGCGCY 1 cut(s) 319
HaeIII GGCC 3 cut(s) 86, 682, 913
HapII CCGG 3 cut(s) 35, 252, 731
HhaI GCGC 2 cut(s) 18, 318
Hin1II CATG 8 cut(s) 22, 64, 535, 592, 634, 832, 1088, 1834
Hin6I GCGC 2 cut(s) 16, 316
HinP1I GCGC 2 cut(s) 16, 316
HindIII AAGCTT 1 cut(s) 1225
HinfI GANTC 4 cut(s) 127, 220, 1386, 1512
HpaII CCGG 3 cut(s) 35, 252, 731
HphI GGTGA 4 cut(s) 34, 760, 1568, 1940
Hpy166II GTNNAC 6 cut(s) 404, 437, 700, 1082, 1736, 1940
Hpy188III TCNNGA 7 cut(s) 631, 935, 1280, 1390, 1412, 1516, 1874
Hpy8I GTNNAC 6 cut(s) 404, 437, 700, 1082, 1736, 1940
HpyAV CCTTC 4 cut(s) 460, 596, 693, 1547
HpyCH4III ACNGT 4 cut(s) 789, 1015, 1490, 1804
HpyCH4IV ACGT 5 cut(s) 619, 1130, 1738, 1812, 1857
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 24, 232, 428, 457, 500
HpySE526I ACGT 5 cut(s) 619, 1130, 1738, 1812, 1857
Hsp92II CATG 8 cut(s) 22, 64, 535, 592, 634, 832, 1088, 1834
HspAI GCGC 2 cut(s) 16, 316
Ksp22I TGATCA 1 cut(s) 357
Kzo9I GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
LguI GCTCTTC 1 cut(s) 39
LmnI GCTCC 2 cut(s) 4, 409
Lsp1109I GCAGC 5 cut(s) 19, 65, 434, 601, 1589
LweI GCATC 5 cut(s) 114, 409, 1237, 1417, 1941
MaeI CTAG 3 cut(s) 1152, 1311, 1992
MaeII ACGT 5 cut(s) 619, 1130, 1738, 1812, 1857
MaeIII GTNAC 6 cut(s) 748, 1368, 1490, 1808, 1846, 1967
MalI GATC 6 cut(s) 359, 987, 1278, 1303, 1500, 1560
MboI GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
MflI RGATCY 1 cut(s) 985
MhlI GDGCHC 4 cut(s) 35, 51, 737, 1942
MlsI TGGCCA 1 cut(s) 913
MluNI TGGCCA 1 cut(s) 913
MlyI GAGTC 2 cut(s) 121, 1506
MmeI TCCRAC 1 cut(s) 1357
Mox20I TGGCCA 1 cut(s) 913
Mph1103I ATGCAT 2 cut(s) 352, 1252
MscI TGGCCA 1 cut(s) 913
MseI TTAA 7 cut(s) 174, 183, 281, 977, 1098, 1590, 1773
MslI CAYNNNNRTG 3 cut(s) 122, 622, 746
Msp20I TGGCCA 1 cut(s) 913
MspA1I CMGCKG 1 cut(s) 425
MspI CCGG 3 cut(s) 35, 252, 731
MspR9I CCNGG 4 cut(s) 35, 732, 1790, 1844
MvaI CCWGG 2 cut(s) 1790, 1844
MvnI CGCG 2 cut(s) 936, 1306
MwoI GCNNNNNNNGC 6 cut(s) 13, 24, 232, 428, 457, 500
NciI CCSGG 2 cut(s) 35, 732
NcoI CCATGG 1 cut(s) 828
NdeI CATATG 2 cut(s) 346, 1252
NdeII GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
NlaIII CATG 8 cut(s) 22, 64, 535, 592, 634, 832, 1088, 1834
NlaIV GGNNCC 2 cut(s) 1781, 1839
NmeAIII GCCGAG 1 cut(s) 112
NmuCI GTSAC 2 cut(s) 748, 1808
NruI TCGCGA 1 cut(s) 936
NsiI ATGCAT 2 cut(s) 352, 1252
NspI RCATGY 3 cut(s) 64, 592, 1088
OliI CACNNNNGTG 1 cut(s) 746
PagI TCATGA 1 cut(s) 630
PciI ACATGT 1 cut(s) 1084
PciSI GCTCTTC 1 cut(s) 39
PfeI GAWTC 2 cut(s) 220, 1386
PflMI CCANNNNNTGG 1 cut(s) 1789
PinAI ACCGGT 1 cut(s) 251
PkrI GCNGC 6 cut(s) 9, 55, 228, 424, 616, 1579
PleI GAGTC 2 cut(s) 121, 1506
PmaCI CACGTG 1 cut(s) 620
PmlI CACGTG 1 cut(s) 620
PpsI GAGTC 2 cut(s) 121, 1506
Ppu21I YACGTR 2 cut(s) 620, 1739
PpuMI RGGWCCY 1 cut(s) 1837
PscI ACATGT 1 cut(s) 1084
PshBI ATTAAT 1 cut(s) 1098
Psp124BI GAGCTC 1 cut(s) 51
Psp5II RGGWCCY 1 cut(s) 1837
Psp6I CCWGG 2 cut(s) 1788, 1842
PspCI CACGTG 1 cut(s) 620
PspEI GGTNACC 1 cut(s) 1368
PspFI CCCAGC 1 cut(s) 1742
PspGI CCWGG 2 cut(s) 1788, 1842
PspN4I GGNNCC 2 cut(s) 1781, 1839
PspPI GGNCC 3 cut(s) 525, 680, 1837
PspPPI RGGWCCY 1 cut(s) 1837
PsrI GAACNNNNNNTAC 2 cut(s) 1719, 1751
PsuI RGATCY 1 cut(s) 985
PvuII CAGCTG 1 cut(s) 425
RruI TCGCGA 1 cut(s) 936
RsaI GTAC 4 cut(s) 59, 587, 1428, 1883
RsaNI GTAC 4 cut(s) 58, 586, 1427, 1882
RseI CAYNNNNRTG 3 cut(s) 122, 622, 746
SacI GAGCTC 1 cut(s) 51
SapI GCTCTTC 1 cut(s) 39
SaqAI TTAA 7 cut(s) 174, 183, 281, 977, 1098, 1590, 1773
SatI GCNGC 6 cut(s) 8, 54, 227, 423, 615, 1578
Sau3AI GATC 6 cut(s) 357, 985, 1276, 1301, 1498, 1558
Sau96I GGNCC 3 cut(s) 525, 680, 1837
SchI GAGTC 2 cut(s) 121, 1506
ScrFI CCNGG 4 cut(s) 35, 732, 1790, 1844
SduI GDGCHC 4 cut(s) 35, 51, 737, 1942
SfaNI GCATC 5 cut(s) 114, 409, 1237, 1417, 1941
SfcI CTRYAG 1 cut(s) 654
SinI GGWCC 2 cut(s) 525, 1837
SmiMI CAYNNNNRTG 3 cut(s) 122, 622, 746
SmlI CTYRAG 4 cut(s) 1412, 1516, 1686, 1922
SmoI CTYRAG 4 cut(s) 1412, 1516, 1686, 1922
SsiI CCGC 4 cut(s) 226, 579, 1306, 1524
SspI AATATT 1 cut(s) 706
SspMI CTAG 3 cut(s) 1152, 1311, 1992
SstI GAGCTC 1 cut(s) 51
StyD4I CCNGG 4 cut(s) 33, 730, 1788, 1842
StyI CCWWGG 3 cut(s) 549, 828, 886
TaaI ACNGT 4 cut(s) 789, 1015, 1490, 1804
TaiI ACGT 5 cut(s) 622, 1133, 1741, 1815, 1860
TaqI TCGA 4 cut(s) 120, 1199, 1279, 1458
TatI WGTACW 2 cut(s) 585, 1426
TauI GCSGC 1 cut(s) 229
TfiI GAWTC 2 cut(s) 220, 1386
Tru1I TTAA 7 cut(s) 174, 183, 281, 977, 1098, 1590, 1773
Tru9I TTAA 7 cut(s) 174, 183, 281, 977, 1098, 1590, 1773
TscAI CASTG 1 cut(s) 1813
TseFI GTSAC 2 cut(s) 748, 1808
TseI GCWGC 5 cut(s) 7, 53, 422, 614, 1577
Tsp45I GTSAC 2 cut(s) 748, 1808
TspDTI ATGAA 5 cut(s) 405, 1134, 1203, 1269, 1779
TspGWI ACGGA 2 cut(s) 907, 1925
TspRI CASTG 1 cut(s) 1813
Van91I CCANNNNNTGG 1 cut(s) 1789
VneI GTGCAC 1 cut(s) 1938
VpaK11BI GGWCC 2 cut(s) 525, 1837
VspI ATTAAT 1 cut(s) 1098
XagI CCTNNNNNAGG 1 cut(s) 890
XapI RAATTY 4 cut(s) 334, 392, 1715, 1766
XceI RCATGY 3 cut(s) 64, 592, 1088
XcmI CCANNNNNNNNNTGG 1 cut(s) 1870
XmiI GTMKAC 1 cut(s) 1735
XspI CTAG 3 cut(s) 1152, 1311, 1992
Zsp2I ATGCAT 2 cut(s) 352, 1252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.