RLG00000030474

Crossover junction endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0002805
Physical Location & Seq
Reverse (-)
62181776 .. 62192400
10625 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030474

Sequence Viewer

Length: 2022 bp
ATGGACCGGCACAAGCGGTTGGTGGTGTGCTCCGAGAATGAAGCGCTGGCAGAGTACATGTTGAGTAAGTGGCAGGAAATGGCAGACAAGAAGCCCAAAGGAATCTCTGAAAACATTGAAAAGACTCTTACCAAGGCATACTCCAATGTCTGCAACTCTAAGAATCCTGTTAAAACCCTCAAGGACTTTTCCCAAATCAAGGGTGTTGGGAAGTGGATTTTGAAGCTTATGCAAGGGTACTTTGACACCGGTTCAGGCAGTTCTGAACCAGAAGATGTAACTAAAAAGGGTAAGAGAACCAAAGGAAGCAAACGCTATGTTCCACAAAAGAATTCTGTAGCATATGCTTTACTGATCACACTTTACAGGGGAACTGAAAGTGGGAATGAATTTATGCGTAAACAGGAGCTCATTGATGCAGCTGAAGCAAGTGGACTATCTCGTGTTCCAATTATGCCAGAGAAGGGAAAGGGAATACCAGTACACCCGGGAAATTCTACAAGGGAATGGTATAGTGGTTGGTCCTGCATGAAGACATTGATAACCAAGGGACTGGTTGTGAAATCAAGTTGCCCAGCAAAGTACATGCTTACTCAAGAAGGTAAGGAGGCTGCTCGTGAATGTCTCATGAGGTCTGGTTTGGCGGATCCTGTAGAAATAATTTCTAACGCCAGGGATTTGTCTATGGGGGATGTGGACATTTCACATCAGGAACTTTCTAGTCCTGACTCGGCCACAGATATGACATTGTTATTCTGTAATTCAAGTAGGAATAAAAACTCAATTGATATTCCCGTGGAATATCTTGACAAGTTTACACGCATGGGGTATTCTGAGGAACAGATGAACCGAGCTATCAGTGAAGTTTTAGAGACTTCCCATAACAAGGAAATCTCTTCACTATGGCCGTCAGTTCTTTGTCGCCTTCGAGAAGATGAGGTTTATGGTTTTCATATGAAGTCTCAAAGTGTAAGGGGAAATCTTCGGGCAACACCATCCACATATACTCTTGTGAATGGTGATGGAGATTGTGTAGGGAGTGAGGGTAGACTGCCTAACACTTCTAGGGATGGAGGTCCTACACCAAGAATTAATTCTGACAAGGTTGCATCAAAGTCGTTTACGACGGGAGCTCCTTCATCTCCTAGCTGTCCTGTGCCAAAGTCTAGTTTGGCTGGTGTTGAAGCAAGTTCGAAAGCTTTGTCCGTGCCACCTTTAAGCTTTGGGGAGAAATTTGAAGATGCATATGAACTAGTCTTTGTATTGGATGATCGAGAACAATTGGCCGCTCAGATATCACGGTCTAGGAGCATTATCGAGAGTGTTATTTCTGGATGCAAAATCACAGTAGAGGTTAGGCGGTTACCAGTTGGAGACGGAATTTGGATAGCTCGGCACAAACATCTGAAGAGTGAATATGTACTTGATATTATTGTTGAGAGGAAGAATGTTGATGATTTGCGCTGTTCAATCAGAGACAACCGTTACAGGGATCAAAAATTGAGACTTTTGCGGTGTGGACTTAAGAAGCTGATATATCTCGTGGAAGGTGATCCAAATTCTAGTGAAGCAGCAGAAAGCATCAAAACAGCTTGCTTTACAACCGAACTTTTGGAGGGCTTTGATGTTCAGAGAACCGGAAACGTGACTGAGACTTTGAGGAAGTATGGTTATCTTACTGAAGCAATTTTTAAATATTACAAAGATCTCTCTGAGGAACAGCATAAGCAAGCTGGAGTTTGTCCTCCTTTTGATGAATTTAACAAAAGGTGCCAAGACCTGGACAAGATGACAGTCAGCGACGTATTTGCCATTCAGCTCATGCAGGTCCCCCAAGTGACTGAGGAAGTTGCCATAGCTGTTCTGGATCTGTACCCAACAGTTTTTTCTCTTGCCCGTGAATACTCTCTACTTGAGGGCAATGTTGGCGCACAGGAGGAGATGCTTAGATCACAGAGTAACAATGTTGTAAATGCTGCTGCTAGTAAGAATATATTTCACTTTGTTTGGGGCATTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000280 GO:0000712 GO:0000724 GO:0000725 GO:0000727 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007093 GO:0007095 GO:0007127 GO:0007129 GO:0007131 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0016043 GO:0016787 GO:0016788 GO:0016889 GO:0016894 GO:0022402 GO:0022414 GO:0022607 GO:0031297 GO:0031570 GO:0031572 GO:0031573 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044773 GO:0044774 GO:0044818 GO:0045005 GO:0045132 GO:0045143 GO:0045786 GO:0045930 GO:0046483 GO:0048256 GO:0048257 GO:0048285 GO:0048476 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051026 GO:0051276 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0051726 GO:0061982 GO:0065007 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901576 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902749 GO:1902750 GO:1903046 GO:1903047
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 map03440 map03460
Pfam Domains
Protein Families
ERCC4

Protein Analysis

674

Amino Acids

75.09

Weight (kDa)

7.08

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_MUS81 PF21136 108 - 205 9e-13 Crossover junction endonuclease MUS81-like, winged helix domain
ERCC4 PF02732 443 - 553 1.9e-22 ERCC4 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1816
AccB1I GGYRCC 1 cut(s) 1770
AccB7I CCANNNNNTGG 1 cut(s) 1780
AccBSI CCGCTC 1 cut(s) 1289
AccI GTMKAC 1 cut(s) 1048
AciI CCGC 5 cut(s) 16, 644, 1287, 1360, 1513
AclWI GGATC 5 cut(s) 641, 654, 1500, 1547, 1875
AcoI YGGCCR 3 cut(s) 732, 905, 1284
AcsI RAATTY 7 cut(s) 331, 389, 493, 1232, 1380, 1558, 1757
AcuI CTGAAG 3 cut(s) 444, 1427, 1701
AfaI GTAC 6 cut(s) 56, 239, 483, 584, 1422, 1874
AfeI AGCGCT 1 cut(s) 45
AfiI CCNNNNNNNGG 5 cut(s) 199, 464, 886, 1489, 1780
AflII CTTAAG 1 cut(s) 1523
AflIII ACRYGT 1 cut(s) 57
AgeI ACCGGT 1 cut(s) 248
AgsI TTSAA 6 cut(s) 119, 223, 765, 1184, 1238, 1470
AhlI ACTAGT 1 cut(s) 1252
AjnI CCWGG 2 cut(s) 671, 1779
AjuI GAANNNNNNNTTGG 4 cut(s) 1078, 1110, 1870, 1902
Alw21I GWGCWC 3 cut(s) 32, 411, 1135
Alw26I GTCTC 7 cut(s) 629, 866, 966, 1368, 1470, 1498, 1646
AlwI GGATC 5 cut(s) 641, 654, 1500, 1547, 1875
Ama87I CYCGRG 1 cut(s) 487
Aor51HI AGCGCT 1 cut(s) 45
AoxI GGCC 3 cut(s) 732, 905, 1284
ApeKI GCWGC 5 cut(s) 419, 611, 1571, 1976, 1979
ApoI RAATTY 7 cut(s) 331, 389, 493, 1232, 1380, 1558, 1757
ArsI GACNNNNNNTTYG 4 cut(s) 1187, 1219, 1639, 1671
AseI ATTAAT 1 cut(s) 1092
AsiGI ACCGGT 1 cut(s) 248
Asp700I GAANNNNTTC 1 cut(s) 1093
AspLEI GCGC 3 cut(s) 46, 1464, 1931
AspS9I GGNCC 4 cut(s) 4, 522, 1076, 1828
AsuC2I CCSGG 2 cut(s) 488, 489
AsuHPI GGTGA 2 cut(s) 1031, 1562
AsuII TTCGAA 1 cut(s) 1193
AvaI CYCGRG 1 cut(s) 487
AvaII GGWCC 4 cut(s) 4, 522, 1076, 1828
BamHI GGATCC 1 cut(s) 646
BanI GGYRCC 1 cut(s) 1770
BanII GRGCYC 2 cut(s) 411, 1135
BauI CACGAG 3 cut(s) 441, 615, 1541
BbsI GAAGAC 1 cut(s) 539
Bbv12I GWGCWC 3 cut(s) 32, 411, 1135
BbvI GCAGC 5 cut(s) 431, 598, 1583, 1963, 1966
BccI CCATC 3 cut(s) 1003, 1016, 1064
BceAI ACGGC 1 cut(s) 892
BcgI CGANNNNNNTGC 4 cut(s) 1098, 1132, 1790, 1824
BciT130I CCWGG 2 cut(s) 673, 1781
BclI TGATCA 1 cut(s) 354
BcnI CCSGG 2 cut(s) 488, 489
BcoDI GTCTC 7 cut(s) 629, 866, 966, 1368, 1470, 1498, 1646
BcuI ACTAGT 1 cut(s) 1252
BfaI CTAG 8 cut(s) 720, 1065, 1146, 1167, 1253, 1305, 1563, 1983
BfmI CTRYAG 2 cut(s) 336, 651
BfoI RGCGCY 1 cut(s) 47
BfrI CTTAAG 1 cut(s) 1523
BfuAI ACCTGC 1 cut(s) 1816
BglII AGATCT 1 cut(s) 1705
BisI GCNGC 6 cut(s) 420, 612, 1287, 1572, 1977, 1980
BlsI GCNGC 6 cut(s) 421, 613, 1288, 1573, 1978, 1981
Bme1390I CCNGG 4 cut(s) 488, 489, 673, 1781
Bme18I GGWCC 4 cut(s) 4, 522, 1076, 1828
BmeT110I CYCGRG 1 cut(s) 487
BmgT120I GGNCC 4 cut(s) 4, 522, 1076, 1828
BmiI GGNNCC 3 cut(s) 648, 1772, 1830
BmrFI CCNGG 4 cut(s) 488, 489, 673, 1781
BmsI GCATC 6 cut(s) 406, 1118, 1231, 1325, 1590, 1932
BpiI GAAGAC 1 cut(s) 539
BpmI CTGGAG 1 cut(s) 1755
Bpu14I TTCGAA 1 cut(s) 1193
BpuEI CTTGAG 3 cut(s) 164, 579, 1934
BpuMI CCSGG 2 cut(s) 488, 489
BsaJI CCNNGG 5 cut(s) 132, 487, 546, 672, 795
BsaWI WCCGGW 2 cut(s) 248, 1637
BsaXI ACNNNNNCTCC 6 cut(s) 1017, 1030, 1047, 1060, 1117, 1147
Bsc4I CCNNNNNNNGG 5 cut(s) 199, 464, 886, 1489, 1780
Bse118I RCCGGY 2 cut(s) 6, 248
Bse1I ACTGG 3 cut(s) 479, 558, 1367
Bse3DI GCAATG 1 cut(s) 1927
BseBI CCWGG 2 cut(s) 673, 1781
BseDI CCNNGG 5 cut(s) 132, 487, 546, 672, 795
BseGI GGATG 5 cut(s) 697, 995, 1075, 1273, 1340
BseLI CCNNNNNNNGG 5 cut(s) 199, 464, 886, 1489, 1780
BseMI GCAATG 1 cut(s) 1927
BseMII CTCAG 5 cut(s) 825, 1304, 1641, 1704, 1833
BseNI ACTGG 3 cut(s) 479, 558, 1367
BseRI GAGGAG 1 cut(s) 1952
BseXI GCAGC 5 cut(s) 431, 598, 1583, 1963, 1966
BseYI CCCAGC 1 cut(s) 574
BshFI GGCC 3 cut(s) 734, 907, 1286
BshNI GGYRCC 1 cut(s) 1770
BshTI ACCGGT 1 cut(s) 248
BsiHKAI GWGCWC 3 cut(s) 32, 411, 1135
BsiHKCI CYCGRG 1 cut(s) 487
BsiSI CCGG 4 cut(s) 7, 249, 488, 1638
BslFI GGGAC 2 cut(s) 564, 1814
BslI CCNNNNNNNGG 5 cut(s) 199, 464, 886, 1489, 1780
BsmAI GTCTC 7 cut(s) 629, 866, 966, 1368, 1470, 1498, 1646
BsmBI CGTCTC 1 cut(s) 1368
BsmFI GGGAC 2 cut(s) 564, 1814
BsnI GGCC 3 cut(s) 734, 907, 1286
BsoBI CYCGRG 1 cut(s) 487
Bsp119I TTCGAA 1 cut(s) 1193
Bsp1286I GDGCHC 3 cut(s) 32, 411, 1135
Bsp143I GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
BspACI CCGC 5 cut(s) 16, 644, 1287, 1360, 1513
BspANI GGCC 3 cut(s) 734, 907, 1286
BspCNI CTCAG 5 cut(s) 826, 1303, 1642, 1705, 1834
BspHI TCATGA 1 cut(s) 627
BspLI GGNNCC 3 cut(s) 648, 1772, 1830
BspMI ACCTGC 1 cut(s) 1816
BspPI GGATC 5 cut(s) 641, 654, 1500, 1547, 1875
BspT104I TTCGAA 1 cut(s) 1193
BspT107I GGYRCC 1 cut(s) 1770
BspTI CTTAAG 1 cut(s) 1523
BsrBI CCGCTC 1 cut(s) 1289
BsrDI GCAATG 1 cut(s) 1927
BsrFI RCCGGY 2 cut(s) 6, 248
BsrI ACTGG 3 cut(s) 479, 558, 1367
BssAI RCCGGY 2 cut(s) 6, 248
BssECI CCNNGG 5 cut(s) 132, 487, 546, 672, 795
BssMI GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
BssSI CACGAG 3 cut(s) 441, 615, 1541
BssT1I CCWWGG 2 cut(s) 132, 546
Bst2BI CACGAG 3 cut(s) 441, 615, 1541
Bst2UI CCWGG 2 cut(s) 673, 1781
Bst4CI ACNGT 5 cut(s) 1302, 1348, 1484, 1795, 1882
Bst6I CTCTTC 2 cut(s) 901, 1403
BstAFI CTTAAG 1 cut(s) 1523
BstBI TTCGAA 1 cut(s) 1193
BstC8I GCNNGC 3 cut(s) 48, 1594, 1731
BstDEI CTNAG 7 cut(s) 159, 834, 1290, 1650, 1713, 1842, 1946
BstDSI CCRYGG 1 cut(s) 795
BstEII GGTNACC 1 cut(s) 1362
BstF5I GGATG 5 cut(s) 697, 995, 1075, 1273, 1340
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 3 cut(s) 46, 1464, 1931
BstKTI GATC 8 cut(s) 357, 649, 1273, 1495, 1555, 1708, 1870, 1952
BstMAI GTCTC 7 cut(s) 629, 866, 966, 1368, 1470, 1498, 1646
BstMBI GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
BstMWI GCNNNNNNNGC 2 cut(s) 425, 1926
BstNI CCWGG 2 cut(s) 673, 1781
BstNSI RCATGY 2 cut(s) 61, 589
BstPI GGTNACC 1 cut(s) 1362
BstSCI CCNGG 4 cut(s) 486, 487, 671, 1779
BstSFI CTRYAG 2 cut(s) 336, 651
BstV1I GCAGC 5 cut(s) 431, 598, 1583, 1963, 1966
BstV2I GAAGAC 1 cut(s) 539
BstX2I RGATCY 3 cut(s) 646, 1705, 1867
BstXI CCANNNNNNTGG 1 cut(s) 553
BstYI RGATCY 3 cut(s) 646, 1705, 1867
BsuRI GGCC 3 cut(s) 734, 907, 1286
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 5 cut(s) 697, 995, 1075, 1273, 1340
BtsIMutI CAGTG 1 cut(s) 865
BveI ACCTGC 1 cut(s) 1816
Cac8I GCNNGC 3 cut(s) 48, 1594, 1731
CciI TCATGA 1 cut(s) 627
CfoI GCGC 3 cut(s) 46, 1464, 1931
Cfr10I RCCGGY 2 cut(s) 6, 248
Cfr13I GGNCC 4 cut(s) 4, 522, 1076, 1828
Cfr9I CCCGGG 1 cut(s) 487
Csp6I GTAC 6 cut(s) 55, 238, 482, 583, 1421, 1873
CspAI ACCGGT 1 cut(s) 248
CviAII CATG 6 cut(s) 58, 529, 586, 628, 823, 1822
CviQI GTAC 6 cut(s) 55, 238, 482, 583, 1421, 1873
DdeI CTNAG 7 cut(s) 159, 834, 1290, 1650, 1713, 1842, 1946
DpnI GATC 8 cut(s) 356, 648, 1272, 1494, 1554, 1707, 1869, 1951
DpnII GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
DraI TTTAAA 1 cut(s) 1693
EaeI YGGCCR 3 cut(s) 732, 905, 1284
Eam1104I CTCTTC 2 cut(s) 901, 1403
EarI CTCTTC 2 cut(s) 901, 1403
EciI GGCGGA 1 cut(s) 659
Ecl136II GAGCTC 2 cut(s) 409, 1133
Eco130I CCWWGG 2 cut(s) 132, 546
Eco24I GRGCYC 2 cut(s) 411, 1135
Eco32I GATATC 1 cut(s) 1296
Eco47I GGWCC 4 cut(s) 4, 522, 1076, 1828
Eco47III AGCGCT 1 cut(s) 45
Eco53kI GAGCTC 2 cut(s) 409, 1133
Eco57I CTGAAG 3 cut(s) 444, 1427, 1701
Eco88I CYCGRG 1 cut(s) 487
Eco91I GGTNACC 1 cut(s) 1362
EcoICRI GAGCTC 2 cut(s) 409, 1133
EcoO109I RGGNCCY 2 cut(s) 1076, 1828
EcoO65I GGTNACC 1 cut(s) 1362
EcoRI GAATTC 1 cut(s) 331
EcoRII CCWGG 2 cut(s) 671, 1779
EcoRV GATATC 1 cut(s) 1296
EcoT14I CCWWGG 2 cut(s) 132, 546
EcoT22I ATGCAT 1 cut(s) 1246
EcoT38I GRGCYC 2 cut(s) 411, 1135
ErhI CCWWGG 2 cut(s) 132, 546
Esp3I CGTCTC 1 cut(s) 1368
FaeI CATG 6 cut(s) 61, 532, 589, 631, 826, 1825
FaqI GGGAC 2 cut(s) 564, 1814
FatI CATG 6 cut(s) 57, 528, 585, 627, 822, 1821
FauNDI CATATG 3 cut(s) 343, 954, 1246
FbaI TGATCA 1 cut(s) 354
FblI GTMKAC 1 cut(s) 1048
Fnu4HI GCNGC 6 cut(s) 420, 612, 1287, 1572, 1977, 1980
FokI GGATG 5 cut(s) 704, 982, 1082, 1280, 1347
FriOI GRGCYC 2 cut(s) 411, 1135
Fsp4HI GCNGC 6 cut(s) 420, 612, 1287, 1572, 1977, 1980
FspBI CTAG 8 cut(s) 720, 1065, 1146, 1167, 1253, 1305, 1563, 1983
GlaI GCGC 3 cut(s) 45, 1463, 1930
GluI GCNGC 6 cut(s) 420, 612, 1287, 1572, 1977, 1980
GsaI CCCAGC 1 cut(s) 578
GsuI CTGGAG 1 cut(s) 1755
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 3 cut(s) 734, 907, 1286
HapII CCGG 4 cut(s) 7, 249, 488, 1638
HhaI GCGC 3 cut(s) 46, 1464, 1931
Hin1II CATG 6 cut(s) 61, 532, 589, 631, 826, 1825
Hin6I GCGC 3 cut(s) 44, 1462, 1929
HinP1I GCGC 3 cut(s) 44, 1462, 1929
HindIII AAGCTT 3 cut(s) 224, 1197, 1219
HinfI GANTC 4 cut(s) 102, 124, 163, 728
HpaII CCGG 4 cut(s) 7, 249, 488, 1638
HphI GGTGA 2 cut(s) 1031, 1562
Hpy166II GTNNAC 8 cut(s) 401, 434, 484, 697, 816, 1049, 1122, 1520
Hpy8I GTNNAC 8 cut(s) 401, 434, 484, 697, 816, 1049, 1122, 1520
Hpy99I CGWCG 2 cut(s) 1129, 1805
HpyAV CCTTC 5 cut(s) 457, 593, 935, 1146, 1541
HpyCH4III ACNGT 5 cut(s) 1302, 1348, 1484, 1795, 1882
HpyCH4IV ACGT 2 cut(s) 1644, 1803
HpyCH4V TGCA 8 cut(s) 153, 232, 419, 528, 1109, 1244, 1338, 1825
HpyF10VI GCNNNNNNNGC 2 cut(s) 425, 1926
HpyF3I CTNAG 7 cut(s) 159, 834, 1290, 1650, 1713, 1842, 1946
HpySE526I ACGT 2 cut(s) 1644, 1803
Hsp92II CATG 6 cut(s) 61, 532, 589, 631, 826, 1825
HspAI GCGC 3 cut(s) 44, 1462, 1929
Ksp22I TGATCA 1 cut(s) 354
Kzo9I GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
LmnI GCTCC 5 cut(s) 35, 406, 1130, 1138, 1308
Lsp1109I GCAGC 5 cut(s) 431, 598, 1583, 1963, 1966
LweI GCATC 6 cut(s) 406, 1118, 1231, 1325, 1590, 1932
MaeI CTAG 8 cut(s) 720, 1065, 1146, 1167, 1253, 1305, 1563, 1983
MaeII ACGT 2 cut(s) 1644, 1803
MaeIII GTNAC 6 cut(s) 277, 1362, 1484, 1645, 1837, 1958
MalI GATC 8 cut(s) 356, 648, 1272, 1494, 1554, 1707, 1869, 1951
MbiI CCGCTC 1 cut(s) 1289
MboI GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
MboII GAAGA 8 cut(s) 284, 544, 888, 944, 974, 1250, 1420, 1456
MfeI CAATTG 2 cut(s) 783, 1280
MflI RGATCY 3 cut(s) 646, 1705, 1867
MhlI GDGCHC 3 cut(s) 32, 411, 1135
MlyI GAGTC 2 cut(s) 118, 722
MmeI TCCRAC 1 cut(s) 1351
Mph1103I ATGCAT 1 cut(s) 1246
MroXI GAANNNNTTC 1 cut(s) 1093
MseI TTAA 6 cut(s) 171, 1092, 1217, 1524, 1692, 1761
MslI CAYNNNNRTG 1 cut(s) 740
MspA1I CMGCKG 1 cut(s) 422
MspCI CTTAAG 1 cut(s) 1523
MspI CCGG 4 cut(s) 7, 249, 488, 1638
MspR9I CCNGG 4 cut(s) 488, 489, 673, 1781
MunI CAATTG 2 cut(s) 783, 1280
MvaI CCWGG 2 cut(s) 673, 1781
MwoI GCNNNNNNNGC 2 cut(s) 425, 1926
NciI CCSGG 2 cut(s) 488, 489
NdeI CATATG 3 cut(s) 343, 954, 1246
NdeII GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
NlaIII CATG 6 cut(s) 61, 532, 589, 631, 826, 1825
NlaIV GGNNCC 3 cut(s) 648, 1772, 1830
NmeAIII GCCGAG 2 cut(s) 710, 1372
NmuCI GTSAC 2 cut(s) 1645, 1837
NsiI ATGCAT 1 cut(s) 1246
NspI RCATGY 2 cut(s) 61, 589
NspV TTCGAA 1 cut(s) 1193
PagI TCATGA 1 cut(s) 627
PciI ACATGT 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 1093
PfeI GAWTC 2 cut(s) 102, 163
PflMI CCANNNNNTGG 1 cut(s) 1780
PinAI ACCGGT 1 cut(s) 248
PkrI GCNGC 6 cut(s) 421, 613, 1288, 1573, 1978, 1981
PleI GAGTC 2 cut(s) 118, 722
PpsI GAGTC 2 cut(s) 118, 722
PpuMI RGGWCCY 2 cut(s) 1076, 1828
PscI ACATGT 1 cut(s) 57
PshBI ATTAAT 1 cut(s) 1092
Psp124BI GAGCTC 2 cut(s) 411, 1135
Psp5II RGGWCCY 2 cut(s) 1076, 1828
Psp6I CCWGG 2 cut(s) 671, 1779
PspEI GGTNACC 1 cut(s) 1362
PspFI CCCAGC 1 cut(s) 574
PspGI CCWGG 2 cut(s) 671, 1779
PspN4I GGNNCC 3 cut(s) 648, 1772, 1830
PspPI GGNCC 4 cut(s) 4, 522, 1076, 1828
PspPPI RGGWCCY 2 cut(s) 1076, 1828
PsuI RGATCY 3 cut(s) 646, 1705, 1867
PvuII CAGCTG 1 cut(s) 422
RsaI GTAC 6 cut(s) 56, 239, 483, 584, 1422, 1874
RsaNI GTAC 6 cut(s) 55, 238, 482, 583, 1421, 1873
RseI CAYNNNNRTG 1 cut(s) 740
SacI GAGCTC 2 cut(s) 411, 1135
SaqAI TTAA 6 cut(s) 171, 1092, 1217, 1524, 1692, 1761
SatI GCNGC 6 cut(s) 420, 612, 1287, 1572, 1977, 1980
Sau3AI GATC 8 cut(s) 354, 646, 1270, 1492, 1552, 1705, 1867, 1949
Sau96I GGNCC 4 cut(s) 4, 522, 1076, 1828
SchI GAGTC 2 cut(s) 118, 722
ScrFI CCNGG 4 cut(s) 488, 489, 673, 1781
SduI GDGCHC 3 cut(s) 32, 411, 1135
SfaNI GCATC 6 cut(s) 406, 1118, 1231, 1325, 1590, 1932
SfcI CTRYAG 2 cut(s) 336, 651
SfuI TTCGAA 1 cut(s) 1193
SinI GGWCC 4 cut(s) 4, 522, 1076, 1828
SmaI CCCGGG 1 cut(s) 489
SmiMI CAYNNNNRTG 1 cut(s) 740
SmlI CTYRAG 4 cut(s) 179, 594, 1523, 1913
SmoI CTYRAG 4 cut(s) 179, 594, 1523, 1913
SpeI ACTAGT 1 cut(s) 1252
SsiI CCGC 5 cut(s) 16, 644, 1287, 1360, 1513
SspI AATATT 1 cut(s) 1697
SspMI CTAG 8 cut(s) 720, 1065, 1146, 1167, 1253, 1305, 1563, 1983
SstI GAGCTC 2 cut(s) 411, 1135
StyD4I CCNGG 4 cut(s) 486, 487, 671, 1779
StyI CCWWGG 2 cut(s) 132, 546
TaaI ACNGT 5 cut(s) 1302, 1348, 1484, 1795, 1882
TaiI ACGT 2 cut(s) 1647, 1806
TaqI TCGA 4 cut(s) 928, 1193, 1273, 1317
TatI WGTACW 4 cut(s) 54, 481, 582, 1420
TauI GCSGC 1 cut(s) 1289
TfiI GAWTC 2 cut(s) 102, 163
Tru1I TTAA 6 cut(s) 171, 1092, 1217, 1524, 1692, 1761
Tru9I TTAA 6 cut(s) 171, 1092, 1217, 1524, 1692, 1761
TscAI CASTG 1 cut(s) 865
TseFI GTSAC 2 cut(s) 1645, 1837
TseI GCWGC 5 cut(s) 419, 611, 1571, 1976, 1979
Tsp45I GTSAC 2 cut(s) 1645, 1837
TspDTI ATGAA 9 cut(s) 54, 402, 545, 860, 941, 971, 1128, 1263, 1770
TspGWI ACGGA 2 cut(s) 1195, 1392
TspMI CCCGGG 1 cut(s) 487
TspRI CASTG 1 cut(s) 865
Van91I CCANNNNNTGG 1 cut(s) 1780
Vha464I CTTAAG 1 cut(s) 1523
VpaK11BI GGWCC 4 cut(s) 4, 522, 1076, 1828
VspI ATTAAT 1 cut(s) 1092
XapI RAATTY 7 cut(s) 331, 389, 493, 1232, 1380, 1558, 1757
XceI RCATGY 2 cut(s) 61, 589
XcmI CCANNNNNNNNNTGG 1 cut(s) 1861
XmaI CCCGGG 1 cut(s) 487
XmiI GTMKAC 1 cut(s) 1048
XmnI GAANNNNTTC 1 cut(s) 1093
XspI CTAG 8 cut(s) 720, 1065, 1146, 1167, 1253, 1305, 1563, 1983
Zsp2I ATGCAT 1 cut(s) 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.