MD07G1305600.v1.1

Cell division cycle

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0002111
Physical Location & Seq
Forward (+)
36251110 .. 36253628
2519 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1305600.v1.1.491

Sequence Viewer

Length: 1362 bp
ATGGATGCAGGATCAATGGGTTCTTCACCCAACATTAAGTCGCAGTCTAGGTGCCCTCTTCAAGAACAGTTTCTTCAGCGAAGGAATTCTCGGGAAAACTTGGACAGGTTCATACCAAACAGGTCAGCAATGGATTTTGATTTCGCGAACATGATGCTAACGGAAGGTAGGAAAGGTAAGGAAAACCCAGCTGCCTCTTCCCCATCCAGAGAGGCCTATCGGAAGCAGTTGGCAGAGGCAATGAACATGAACCGGACTAGAATCCTTGCATTCAAGAACAAGCCACCTGCCCCTGTTGAGATGTTCCCGCGCGAGTTCTCTTCTCTGCAACAGGATAAACCGGCAAAGCCCCGAAGACACATTCCTCAAACCTCAGAGAAGACATTGGATGCTCCGGACCTTGTGGATGATTACTACCTCAATTTGTTGGATTGGGGGAGCTGCAATGTCCTCGCAATAGCTCTTGCAAACACAGTTTATTTGTGGGATGCTACCAATGGTTCTACTTCGGAACTGGTCACATTTGAGGATGAAGTTGGATCTGTGACCAGCGTCAGTTGGGCTCCTGATGGGCGCCACATTGCTATTGGACTGGACAATTCTGAAGTACAGTTATGGGATTCGACTGCTAACAAACAGCTGAGAACGTTGAGAGGTTGCCACCGTTCACGAGTAGGCTCTTTGGCATGGAACAACCACATTCTTACAACTGGAGGGATGGACGGTTGCATTGTGAACAATGATGTAAGAATTAGATCACACATTGTTGAGACATACAGAGGACATGAGCAAGAGGTTTGTGGACTCAAGTGGTCGGCCTCAGGCCAACAATTGGCTAGCGGAGGAAACGACAACCTTCTCCATATATGGGACAGATCAGTGGCATCTTCAAATTCACCAACTCAGTGGCTTCACAGACTTGAAGATCATACAGCTGCAGTGAAAGCCCTGGCTTGGTGTCCTTTCCAGGGCAATTTATTGGCTTCTGGTGGAGGCGGGGGTGACCGGTGCATAAAGTTTTGGAACACTCACACAGGTGCATGCTTGAACTCGGTTGACACTGGCTCTCAGGTCTGTTCTTTGCTGTGGAACAAGAATGAAAGGGAATTGCTTAGCTCACATGGGTTTACTCAGAATCAGCTCACTCTTTGGAAATACCCGTCGATGGCTAAAATTGCCGAGCTCACTGGCCATACTTCTAGAGTTCTTTATATGGCTCAGAGCCCCGATGGTTGCACAGTTGCATCAGCAGCTGGTGATGAAACACTCAGGTTTTGGAACGTTTTTGGGGTCCCTGAGGTGGCTAAACCAGCTCCCAAAGCTAACCCCGAGCCTTTTGCTCATTTGAACCGCATTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 ko04114 ko04120 ko05166 ko05203 map04110 map04111 map04113 map04114 map04120 map05166 map05203
Pfam Domains
Protein Families
ANAPC4_WD40 WD40

Protein Analysis

454

Amino Acids

50.25

Weight (kDa)

7.62

Isoelectric Point (pI)

55.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_CDC20-Fz PF24807 129 - 426 1.3e-125 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 139 - 232 2.5e-07 WDHD1 first WD40 domain
Beta-prop_WDR19_1st PF23389 148 - 244 4.2e-07 WDR19 first beta-propeller
WDR55 PF24796 150 - 259 6.4e-07 WDR55
Beta-prop_WDR3_1st PF25173 150 - 250 7.4e-13 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 151 - 293 4.5e-18 WDR5 beta-propeller domain
WD40_Prp19 PF24814 153 - 230 9.4e-08 Prp19 WD40 domain
WD40_Gbeta PF25391 154 - 291 3.6e-08 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 156 - 292 2.6e-19 THOC3 beta-propeller domain
Beta-prop_EML_2 PF23414 157 - 297 2.4e-11 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 158 - 290 2.5e-09 WDR36/Utp21 first beta-propeller
Beta-prop_TEP1_2nd PF25047 165 - 269 2.2e-09 TEP-1 second beta-propeller
Beta-prop_WDR3_2nd PF25172 183 - 301 2.5e-07 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 231 - 427 8.4e-21 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 234 - 385 1.4e-18 WDR3 first beta-propeller domain
WD40_Gbeta PF25391 250 - 428 3.2e-09 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 254 - 372 1.6e-14 WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 255 - 352 4.8e-08 CAF1B/HIR1 beta-propeller domain
WD40 PF00400 256 - 291 1e-07 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 257 - 352 9.7e-07 TEP-1 second beta-propeller
Beta-prop_THOC3 PF25174 262 - 372 3.6e-20 THOC3 beta-propeller domain
Beta-prop_WDR19_1st PF23389 269 - 427 9.5e-06 WDR19 first beta-propeller
Beta-prop_WDR5 PF25175 307 - 428 3.7e-12 WDR5 beta-propeller domain
Beta-prop_EML PF23409 309 - 430 3.3e-07 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 310 - 428 5e-06 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2 PF23414 332 - 428 8.7e-06 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd PF25172 334 - 428 3.6e-08 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 357 - 428 5.4e-09 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 371 - 429 9.9e-06 WDR3 first beta-propeller domain
WD40 PF00400 392 - 427 5e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 295
Acc36I ACCTGC 1 cut(s) 295
AccB1I GGYRCC 2 cut(s) 51, 573
AccB7I CCANNNNNTGG 1 cut(s) 832
AccII CGCG 3 cut(s) 146, 310, 312
AccIII TCCGGA 1 cut(s) 394
AciI CCGC 4 cut(s) 308, 840, 996, 1351
AclI AACGTT 2 cut(s) 647, 1281
AclWI GGATC 2 cut(s) 19, 547
AcoI YGGCCR 1 cut(s) 1189
AcsI RAATTY 2 cut(s) 85, 892
AcuI CTGAAG 2 cut(s) 59, 624
AcyI GRCGYC 1 cut(s) 574
AfaI GTAC 1 cut(s) 609
AfiI CCNNNNNNNGG 6 cut(s) 832, 868, 954, 968, 1165, 1300
AgeI ACCGGT 1 cut(s) 1005
AgsI TTSAA 6 cut(s) 62, 274, 891, 923, 1048, 1348
AjnI CCWGG 2 cut(s) 948, 966
AleI CACNNNNGTG 1 cut(s) 1035
Alw21I GWGCWC 1 cut(s) 1185
Alw26I GTCTC 1 cut(s) 764
AlwI GGATC 2 cut(s) 19, 547
AlwNI CAGNNNCTG 1 cut(s) 1253
Ama87I CYCGRG 2 cut(s) 90, 1328
Aor13HI TCCGGA 1 cut(s) 394
AoxI GGCC 4 cut(s) 213, 816, 823, 1189
ApeKI GCWGC 4 cut(s) 191, 441, 935, 1250
ApoI RAATTY 2 cut(s) 85, 892
AsiGI ACCGGT 1 cut(s) 1005
Asp700I GAANNNNTTC 2 cut(s) 69, 85
AspLEI GCGC 2 cut(s) 312, 576
AspS9I GGNCC 2 cut(s) 397, 1291
AsuHPI GGTGA 4 cut(s) 18, 888, 1013, 1268
AsuNHI GCTAGC 1 cut(s) 836
AvaI CYCGRG 2 cut(s) 90, 1328
AvaII GGWCC 2 cut(s) 397, 1291
AxyI CCTNAGG 2 cut(s) 820, 1296
BaeGI GKGCMC 1 cut(s) 56
BalI TGGCCA 1 cut(s) 1191
BanI GGYRCC 2 cut(s) 51, 573
BanII GRGCYC 3 cut(s) 565, 1185, 1226
BauI CACGAG 1 cut(s) 669
BbsI GAAGAC 2 cut(s) 361, 386
Bbv12I GWGCWC 1 cut(s) 1185
BbvI GCAGC 4 cut(s) 178, 428, 922, 1262
BccI CCATC 5 cut(s) 211, 563, 712, 1159, 1223
BcgI CGANNNNNNTGC 6 cut(s) 136, 170, 433, 467, 1319, 1353
BciT130I CCWGG 2 cut(s) 950, 968
BcoDI GTCTC 1 cut(s) 764
BfaI CTAG 4 cut(s) 48, 258, 837, 1200
BfmI CTRYAG 1 cut(s) 936
BfoI RGCGCY 1 cut(s) 577
BfuAI ACCTGC 1 cut(s) 295
BisI GCNGC 4 cut(s) 192, 442, 936, 1251
BlpI GCTNAGC 1 cut(s) 1112
BlsI GCNGC 4 cut(s) 193, 443, 937, 1252
Bme1390I CCNGG 2 cut(s) 950, 968
Bme18I GGWCC 2 cut(s) 397, 1291
BmeT110I CYCGRG 2 cut(s) 90, 1328
BmgT120I GGNCC 2 cut(s) 397, 1291
BmiI GGNNCC 5 cut(s) 53, 564, 575, 1292, 1293
BmrFI CCNGG 2 cut(s) 950, 968
BmsI GCATC 5 cut(s) 144, 379, 478, 893, 1253
BmtI GCTAGC 1 cut(s) 840
BoxI GACNNNNGTC 1 cut(s) 551
BpiI GAAGAC 2 cut(s) 361, 386
BpmI CTGGAG 1 cut(s) 732
Bpu1102I GCTNAGC 1 cut(s) 1112
BpuEI CTTGAG 1 cut(s) 791
BsaHI GRCGYC 1 cut(s) 574
BsaJI CCNNGG 2 cut(s) 948, 967
BsaWI WCCGGW 3 cut(s) 252, 394, 1005
Bsc4I CCNNNNNNNGG 6 cut(s) 832, 868, 954, 968, 1165, 1300
Bse118I RCCGGY 2 cut(s) 340, 1005
Bse1I ACTGG 5 cut(s) 519, 597, 715, 1066, 1192
Bse21I CCTNAGG 2 cut(s) 820, 1296
Bse3DI GCAATG 4 cut(s) 135, 246, 451, 579
BseAI TCCGGA 1 cut(s) 394
BseBI CCWGG 2 cut(s) 950, 968
BseDI CCNNGG 2 cut(s) 948, 967
BseGI GGATG 7 cut(s) 10, 203, 394, 412, 493, 535, 723
BseLI CCNNNNNNNGG 6 cut(s) 832, 868, 954, 968, 1165, 1300
BseMI GCAATG 4 cut(s) 135, 246, 451, 579
BseMII CTCAG 9 cut(s) 387, 632, 834, 917, 1082, 1145, 1232, 1282, 1287
BseNI ACTGG 5 cut(s) 519, 597, 715, 1066, 1192
BseSI GKGCMC 1 cut(s) 56
BseXI GCAGC 4 cut(s) 178, 428, 922, 1262
BseYI CCCAGC 1 cut(s) 187
Bsh1236I CGCG 3 cut(s) 146, 310, 312
BshFI GGCC 4 cut(s) 215, 818, 825, 1191
BshNI GGYRCC 2 cut(s) 51, 573
BshTI ACCGGT 1 cut(s) 1005
BsiHKAI GWGCWC 1 cut(s) 1185
BsiHKCI CYCGRG 2 cut(s) 90, 1328
BsiSI CCGG 4 cut(s) 253, 341, 395, 1006
BslFI GGGAC 2 cut(s) 884, 1277
BslI CCNNNNNNNGG 6 cut(s) 832, 868, 954, 968, 1165, 1300
BsmAI GTCTC 1 cut(s) 764
BsmFI GGGAC 2 cut(s) 884, 1277
BsmI GAATGC 2 cut(s) 269, 1353
BsnI GGCC 4 cut(s) 215, 818, 825, 1191
BsoBI CYCGRG 2 cut(s) 90, 1328
Bsp1286I GDGCHC 4 cut(s) 56, 565, 1185, 1226
Bsp13I TCCGGA 1 cut(s) 394
Bsp143I GATC 5 cut(s) 11, 539, 755, 875, 925
Bsp1720I GCTNAGC 1 cut(s) 1112
Bsp68I TCGCGA 1 cut(s) 146
BspACI CCGC 4 cut(s) 308, 840, 996, 1351
BspANI GGCC 4 cut(s) 215, 818, 825, 1191
BspCNI CTCAG 9 cut(s) 386, 633, 833, 916, 1081, 1144, 1231, 1281, 1288
BspEI TCCGGA 1 cut(s) 394
BspFNI CGCG 3 cut(s) 146, 310, 312
BspLI GGNNCC 5 cut(s) 53, 564, 575, 1292, 1293
BspMAI CTGCAG 1 cut(s) 940
BspMI ACCTGC 1 cut(s) 295
BspOI GCTAGC 1 cut(s) 840
BspPI GGATC 2 cut(s) 19, 547
BspT107I GGYRCC 2 cut(s) 51, 573
BsrDI GCAATG 4 cut(s) 135, 246, 451, 579
BsrFI RCCGGY 2 cut(s) 340, 1005
BsrI ACTGG 5 cut(s) 519, 597, 715, 1066, 1192
BssAI RCCGGY 2 cut(s) 340, 1005
BssECI CCNNGG 2 cut(s) 948, 967
BssMI GATC 5 cut(s) 11, 539, 755, 875, 925
BssNI GRCGYC 1 cut(s) 574
BssSI CACGAG 1 cut(s) 669
Bst2BI CACGAG 1 cut(s) 669
Bst2UI CCWGG 2 cut(s) 950, 968
Bst4CI ACNGT 6 cut(s) 69, 475, 612, 665, 725, 1240
Bst6I CTCTTC 3 cut(s) 63, 202, 325
BstACI GRCGYC 1 cut(s) 574
BstC8I GCNNGC 2 cut(s) 838, 1042
BstEII GGTNACC 1 cut(s) 1001
BstF5I GGATG 7 cut(s) 10, 203, 394, 412, 493, 535, 723
BstFNI CGCG 3 cut(s) 146, 310, 312
BstH2I RGCGCY 1 cut(s) 577
BstHHI GCGC 2 cut(s) 312, 576
BstKTI GATC 5 cut(s) 14, 542, 758, 878, 928
BstMAI GTCTC 1 cut(s) 764
BstMBI GATC 5 cut(s) 11, 539, 755, 875, 925
BstMWI GCNNNNNNNGC 5 cut(s) 944, 1175, 1250, 1310, 1319
BstNI CCWGG 2 cut(s) 950, 968
BstNSI RCATGY 1 cut(s) 1044
BstPAI GACNNNNGTC 1 cut(s) 551
BstPI GGTNACC 1 cut(s) 1001
BstSCI CCNGG 2 cut(s) 948, 966
BstSFI CTRYAG 1 cut(s) 936
BstSLI GKGCMC 1 cut(s) 56
BstUI CGCG 3 cut(s) 146, 310, 312
BstV1I GCAGC 4 cut(s) 178, 428, 922, 1262
BstV2I GAAGAC 2 cut(s) 361, 386
BstX2I RGATCY 1 cut(s) 539
BstXI CCANNNNNNTGG 1 cut(s) 906
BstYI RGATCY 1 cut(s) 539
Bsu36I CCTNAGG 2 cut(s) 820, 1296
BsuRI GGCC 4 cut(s) 215, 818, 825, 1191
BtsCI GGATG 7 cut(s) 10, 203, 394, 412, 493, 535, 723
BtsI GCAGTG 1 cut(s) 945
BtsIMutI CAGTG 5 cut(s) 885, 911, 945, 1059, 1185
BtuMI TCGCGA 1 cut(s) 146
BveI ACCTGC 1 cut(s) 295
Cac8I GCNNGC 2 cut(s) 838, 1042
CaiI CAGNNNCTG 1 cut(s) 1253
CfoI GCGC 2 cut(s) 312, 576
Cfr10I RCCGGY 2 cut(s) 340, 1005
Cfr13I GGNCC 2 cut(s) 397, 1291
CseI GACGC 1 cut(s) 541
Csp6I GTAC 1 cut(s) 608
CspAI ACCGGT 1 cut(s) 1005
CviAII CATG 6 cut(s) 151, 247, 687, 785, 1041, 1121
CviQI GTAC 1 cut(s) 608
DinI GGCGCC 1 cut(s) 575
DpnI GATC 5 cut(s) 13, 541, 757, 877, 927
DpnII GATC 5 cut(s) 11, 539, 755, 875, 925
EaeI YGGCCR 1 cut(s) 1189
Eam1104I CTCTTC 3 cut(s) 63, 202, 325
EarI CTCTTC 3 cut(s) 63, 202, 325
Ecl136II GAGCTC 1 cut(s) 1183
Eco147I AGGCCT 1 cut(s) 215
Eco24I GRGCYC 3 cut(s) 565, 1185, 1226
Eco47I GGWCC 2 cut(s) 397, 1291
Eco53kI GAGCTC 1 cut(s) 1183
Eco57I CTGAAG 2 cut(s) 59, 624
Eco81I CCTNAGG 2 cut(s) 820, 1296
Eco88I CYCGRG 2 cut(s) 90, 1328
Eco91I GGTNACC 1 cut(s) 1001
EcoICRI GAGCTC 1 cut(s) 1183
EcoO109I RGGNCCY 1 cut(s) 1291
EcoO65I GGTNACC 1 cut(s) 1001
EcoRI GAATTC 1 cut(s) 85
EcoRII CCWGG 2 cut(s) 948, 966
EcoT38I GRGCYC 3 cut(s) 565, 1185, 1226
EgeI GGCGCC 1 cut(s) 575
EheI GGCGCC 1 cut(s) 575
FaeI CATG 6 cut(s) 154, 250, 690, 788, 1044, 1124
FaqI GGGAC 2 cut(s) 884, 1277
FatI CATG 6 cut(s) 150, 246, 686, 784, 1040, 1120
FauI CCCGC 2 cut(s) 315, 989
Fnu4HI GCNGC 4 cut(s) 192, 442, 936, 1251
FokI GGATG 7 cut(s) 17, 190, 401, 419, 500, 542, 730
FriOI GRGCYC 3 cut(s) 565, 1185, 1226
Fsp4HI GCNGC 4 cut(s) 192, 442, 936, 1251
FspBI CTAG 4 cut(s) 48, 258, 837, 1200
GlaI GCGC 2 cut(s) 311, 575
GluI GCNGC 4 cut(s) 192, 442, 936, 1251
GsaI CCCAGC 1 cut(s) 191
GsuI CTGGAG 1 cut(s) 732
HaeII RGCGCY 1 cut(s) 577
HaeIII GGCC 4 cut(s) 215, 818, 825, 1191
HapII CCGG 4 cut(s) 253, 341, 395, 1006
HgaI GACGC 1 cut(s) 541
HhaI GCGC 2 cut(s) 312, 576
Hin1I GRCGYC 1 cut(s) 574
Hin1II CATG 6 cut(s) 154, 250, 690, 788, 1044, 1124
Hin6I GCGC 2 cut(s) 310, 574
HinP1I GCGC 2 cut(s) 310, 574
HincII GTYRAC 1 cut(s) 1057
HindII GTYRAC 1 cut(s) 1057
HinfI GANTC 4 cut(s) 261, 620, 804, 1135
HpaII CCGG 4 cut(s) 253, 341, 395, 1006
HphI GGTGA 4 cut(s) 18, 888, 1013, 1268
Hpy166II GTNNAC 5 cut(s) 668, 736, 803, 1057, 1128
Hpy188I TCNGA 6 cut(s) 222, 376, 511, 604, 1134, 1221
Hpy188III TCNNGA 9 cut(s) 62, 92, 145, 207, 274, 395, 566, 669, 1200
Hpy8I GTNNAC 5 cut(s) 668, 736, 803, 1057, 1128
Hpy99I CGWCG 1 cut(s) 1165
HpyAV CCTTC 3 cut(s) 75, 158, 866
HpyCH4III ACNGT 6 cut(s) 69, 475, 612, 665, 725, 1240
HpyCH4IV ACGT 2 cut(s) 647, 1281
HpyF10VI GCNNNNNNNGC 5 cut(s) 944, 1175, 1250, 1310, 1319
HpySE526I ACGT 2 cut(s) 647, 1281
Hsp92I GRCGYC 1 cut(s) 574
Hsp92II CATG 6 cut(s) 154, 250, 690, 788, 1044, 1124
HspAI GCGC 2 cut(s) 310, 574
KasI GGCGCC 1 cut(s) 573
KflI GGGWCCC 1 cut(s) 1291
Kpn2I TCCGGA 1 cut(s) 394
Kzo9I GATC 5 cut(s) 11, 539, 755, 875, 925
LmnI GCTCC 4 cut(s) 397, 438, 568, 1318
Lsp1109I GCAGC 4 cut(s) 178, 428, 922, 1262
LweI GCATC 5 cut(s) 144, 379, 478, 893, 1253
MaeI CTAG 4 cut(s) 48, 258, 837, 1200
MaeII ACGT 2 cut(s) 647, 1281
MaeIII GTNAC 3 cut(s) 517, 544, 1001
MalI GATC 5 cut(s) 13, 541, 757, 877, 927
MboI GATC 5 cut(s) 11, 539, 755, 875, 925
MboII GAAGA 9 cut(s) 15, 50, 65, 189, 312, 366, 391, 879, 935
MfeI CAATTG 1 cut(s) 830
MflI RGATCY 1 cut(s) 539
MhlI GDGCHC 4 cut(s) 56, 565, 1185, 1226
MlsI TGGCCA 1 cut(s) 1191
MluCI AATT 9 cut(s) 85, 421, 598, 750, 830, 892, 973, 1106, 1173
MluNI TGGCCA 1 cut(s) 1191
Mly113I GGCGCC 1 cut(s) 574
MlyI GAGTC 1 cut(s) 798
MmeI TCCRAC 2 cut(s) 408, 517
Mox20I TGGCCA 1 cut(s) 1191
MroI TCCGGA 1 cut(s) 394
MroXI GAANNNNTTC 2 cut(s) 69, 85
MscI TGGCCA 1 cut(s) 1191
MseI TTAA 1 cut(s) 36
MslI CAYNNNNRTG 1 cut(s) 1035
Msp20I TGGCCA 1 cut(s) 1191
MspA1I CMGCKG 4 cut(s) 191, 640, 935, 1253
MspI CCGG 4 cut(s) 253, 341, 395, 1006
MspR9I CCNGG 2 cut(s) 950, 968
MunI CAATTG 1 cut(s) 830
Mva1269I GAATGC 2 cut(s) 269, 1353
MvaI CCWGG 2 cut(s) 950, 968
MvnI CGCG 3 cut(s) 146, 310, 312
MwoI GCNNNNNNNGC 5 cut(s) 944, 1175, 1250, 1310, 1319
NarI GGCGCC 1 cut(s) 574
NdeII GATC 5 cut(s) 11, 539, 755, 875, 925
NheI GCTAGC 1 cut(s) 836
NlaIII CATG 6 cut(s) 154, 250, 690, 788, 1044, 1124
NlaIV GGNNCC 5 cut(s) 53, 564, 575, 1292, 1293
NmeAIII GCCGAG 1 cut(s) 1204
NmuCI GTSAC 3 cut(s) 517, 544, 1001
NruI TCGCGA 1 cut(s) 146
NspI RCATGY 1 cut(s) 1044
OliI CACNNNNGTG 1 cut(s) 1035
PaeI GCATGC 1 cut(s) 1044
PaqCI CACCTGC 1 cut(s) 295
PceI AGGCCT 1 cut(s) 215
PctI GAATGC 2 cut(s) 269, 1353
PdmI GAANNNNTTC 2 cut(s) 69, 85
PfeI GAWTC 3 cut(s) 261, 620, 1135
PflMI CCANNNNNTGG 1 cut(s) 832
PinAI ACCGGT 1 cut(s) 1005
PkrI GCNGC 4 cut(s) 193, 443, 937, 1252
PleI GAGTC 1 cut(s) 798
PluTI GGCGCC 1 cut(s) 577
PpsI GAGTC 1 cut(s) 798
PpuMI RGGWCCY 1 cut(s) 1291
PshAI GACNNNNGTC 1 cut(s) 551
Psp124BI GAGCTC 1 cut(s) 1185
Psp1406I AACGTT 2 cut(s) 647, 1281
Psp5II RGGWCCY 1 cut(s) 1291
Psp6I CCWGG 2 cut(s) 948, 966
PspEI GGTNACC 1 cut(s) 1001
PspFI CCCAGC 1 cut(s) 187
PspGI CCWGG 2 cut(s) 948, 966
PspN4I GGNNCC 5 cut(s) 53, 564, 575, 1292, 1293
PspPI GGNCC 2 cut(s) 397, 1291
PspPPI RGGWCCY 1 cut(s) 1291
PstI CTGCAG 1 cut(s) 940
PstNI CAGNNNCTG 1 cut(s) 1253
PsuI RGATCY 1 cut(s) 539
PvuII CAGCTG 4 cut(s) 191, 640, 935, 1253
RruI TCGCGA 1 cut(s) 146
RsaI GTAC 1 cut(s) 609
RsaNI GTAC 1 cut(s) 608
RseI CAYNNNNRTG 1 cut(s) 1035
SacI GAGCTC 1 cut(s) 1185
SaqAI TTAA 1 cut(s) 36
SatI GCNGC 4 cut(s) 192, 442, 936, 1251
Sau3AI GATC 5 cut(s) 11, 539, 755, 875, 925
Sau96I GGNCC 2 cut(s) 397, 1291
SchI GAGTC 1 cut(s) 798
ScrFI CCNGG 2 cut(s) 950, 968
SduI GDGCHC 4 cut(s) 56, 565, 1185, 1226
SfaNI GCATC 5 cut(s) 144, 379, 478, 893, 1253
SfcI CTRYAG 1 cut(s) 936
SfoI GGCGCC 1 cut(s) 575
SinI GGWCC 2 cut(s) 397, 1291
SmiMI CAYNNNNRTG 1 cut(s) 1035
SmlI CTYRAG 1 cut(s) 806
SmoI CTYRAG 1 cut(s) 806
SphI GCATGC 1 cut(s) 1044
Sse9I AATT 9 cut(s) 85, 421, 598, 750, 830, 892, 973, 1106, 1173
SseBI AGGCCT 1 cut(s) 215
SsiI CCGC 4 cut(s) 308, 840, 996, 1351
SspDI GGCGCC 1 cut(s) 573
SspMI CTAG 4 cut(s) 48, 258, 837, 1200
SstI GAGCTC 1 cut(s) 1185
StuI AGGCCT 1 cut(s) 215
StyD4I CCNGG 2 cut(s) 948, 966
TaaI ACNGT 6 cut(s) 69, 475, 612, 665, 725, 1240
TaiI ACGT 2 cut(s) 650, 1284
TaqI TCGA 2 cut(s) 623, 1163
TasI AATT 9 cut(s) 85, 421, 598, 750, 830, 892, 973, 1106, 1173
TatI WGTACW 1 cut(s) 607
TfiI GAWTC 3 cut(s) 261, 620, 1135
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
TscAI CASTG 5 cut(s) 885, 911, 945, 1066, 1192
TseFI GTSAC 3 cut(s) 517, 544, 1001
TseI GCWGC 4 cut(s) 191, 441, 935, 1250
Tsp45I GTSAC 3 cut(s) 517, 544, 1001
TspDTI ATGAA 6 cut(s) 100, 257, 263, 546, 1113, 1275
TspGWI ACGGA 1 cut(s) 176
TspRI CASTG 5 cut(s) 885, 911, 945, 1066, 1192
Van91I CCANNNNNTGG 1 cut(s) 832
VpaK11BI GGWCC 2 cut(s) 397, 1291
XapI RAATTY 2 cut(s) 85, 892
XbaI TCTAGA 1 cut(s) 1199
XceI RCATGY 1 cut(s) 1044
XcmI CCANNNNNNNNNTGG 1 cut(s) 584
XmnI GAANNNNTTC 2 cut(s) 69, 85
XspI CTAG 4 cut(s) 48, 258, 837, 1200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.