Prupe.2G323700_v2.0.a1

Cell division cycle

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
29972651 .. 29975736
3086 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G323700.1

Sequence Viewer

Length: 1365 bp
ATGGATGCAGGATCAATGAGTTCTTCTTCTATCTTGAAGTCAGATTCTAGGTGCCCTCTTCGAGAACCGTTTCTTCAGAAAAGGAATTCTAGGGAAAATCTGGACAGGTTCATCCCCAATAGATCAGCGATGGATTTTGATTTCGCGCACTTCATGCTGACTGAAGGTAGGAAAGGTAAGGAAAACCCAGCTATGGTATCTTCCCCATCAAGAGAGGCCTATCGGAAGCAGTTGGCTGAGGCCATGAACATGAACCGGACTCGAATCCTTGCTTTCAAGAACAAGCCTCCGGCCCCTGTAGAGCTCTTCCCACGCGAGTTCTCTTCTTTACCACAAGATAAACCAGCAAAGCCCCGAAGGCACATTCCTCAAACTTCAGAGAGGACATTGGATGCTCCCGACCTTGTGGATGATTACTACCTGAATTTGTTGGATTGGGGAAGCTGCAATGTTCTCGCGATAGCTCTTGCAAACACAGTTTATTTGTGGGATGCTACCAATGGTTCTACTTCGGAGCTTGCCACGTTTGAGGATGAAGTCGGACCTGTTACCAGTGTCAGCTGGGCACCTGATGGACGCCACATTGCCATTGGACTGGACAATTCTGAAGTACAGTTGTGGGATTCGACTGCTAATAAGCAGCTGAGAACTTTGAGAGGTTGCCACAGATCGCGAGTAGGCTCATTGGCATGGAACAATCACATTCTTACAACCGGAGGAATGGATGGCTGTATCGTTAATAATGATGTAAGAGTTAGATCACACATTGTTGAGACATACAGAGGACATGAACAAGAGGTTTGTGGGCTTAAATGGTCAGCCTCAGGCCAGCAATTAGCTAGTGGAGGAAATGATAACCTCCTCCATATATGGGACAGATCAGTGGCATCTTCTAATTCACCGACTCAGTGGCTTCACAGGCTTGAAGACCATACAGCTGCTGTGAAAGCCCTTGCTTGGTGTCCTTTCCAGGGCAACTTATTAGCTTCTGGTGGAGGTGGGGGTGATCGGTGCATAAAGTTTTGGAACACCCACACAGGTGCATGCCTGAACTCAGTCGACACTGGCTCTCAGGTTTGTGCTTTGCTGTGGAACAAGAATGAAAGAGAGCTGCTTAGTTCACATGGATTTACCCAAAATCAGCTTACTCTTTGGAAGTACCCCTCAATGGCTAAAATTGCAGAACTCACTGGCCATACTTCTAGAGTTCTTTATATGGCTCAGAGCCCAGATGGTTGCACAGTGGCATCAGCAGCTGGTGATGAAACACTGAGATTCTGGAATGTGTTTGGGGTCCCTGAGGTGGCTAAACCAGCTCCCAAATCTAACCCTGAGCCTTTTGCTCATTTGAATCGGATCCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

50.37

Weight (kDa)

7.63

Isoelectric Point (pI)

53.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 51, 565
AccI GTMKAC 1 cut(s) 1059
AccII CGCG 4 cut(s) 146, 315, 458, 673
AciI CCGC 1 cut(s) 1360
AclWI GGATC 3 cut(s) 19, 1351, 1364
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 2 cut(s) 85, 424
AcuI CTGAAG 4 cut(s) 59, 183, 360, 627
AcyI GRCGYC 1 cut(s) 577
AfaI GTAC 2 cut(s) 612, 1160
AfiI CCNNNNNNNGG 6 cut(s) 193, 871, 957, 971, 1168, 1303
AgsI TTSAA 4 cut(s) 37, 277, 926, 1351
AjnI CCWGG 1 cut(s) 969
AleI CACNNNNGTG 1 cut(s) 1038
Alw21I GWGCWC 1 cut(s) 306
Alw26I GTCTC 1 cut(s) 767
AlwI GGATC 3 cut(s) 19, 1351, 1364
AlwNI CAGNNNCTG 2 cut(s) 941, 1256
AoxI GGCC 5 cut(s) 216, 240, 291, 826, 1192
ApeKI GCWGC 5 cut(s) 444, 640, 938, 1111, 1253
ApoI RAATTY 2 cut(s) 85, 424
Asp700I GAANNNNTTC 1 cut(s) 69
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 3 cut(s) 292, 542, 1294
AsuHPI GGTGA 3 cut(s) 891, 1016, 1271
AvaII GGWCC 2 cut(s) 542, 1294
AxyI CCTNAGG 2 cut(s) 823, 1299
BaeGI GKGCMC 2 cut(s) 56, 568
BalI TGGCCA 1 cut(s) 1194
BamHI GGATCC 1 cut(s) 1356
BanI GGYRCC 2 cut(s) 51, 565
BanII GRGCYC 2 cut(s) 306, 1229
BbsI GAAGAC 1 cut(s) 933
Bbv12I GWGCWC 1 cut(s) 306
BbvCI CCTCAGC 1 cut(s) 237
BbvI GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
BccI CCATC 5 cut(s) 124, 214, 566, 719, 1226
BcgI CGANNNNNNTGC 2 cut(s) 436, 470
BciT130I CCWGG 1 cut(s) 971
BcoDI GTCTC 1 cut(s) 767
BfaI CTAG 4 cut(s) 48, 90, 840, 1203
BfmI CTRYAG 1 cut(s) 297
BglI GCCNNNNNGGC 1 cut(s) 358
BisI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
BlsI GCNGC 5 cut(s) 446, 642, 940, 1113, 1255
Bme1390I CCNGG 1 cut(s) 971
Bme18I GGWCC 2 cut(s) 542, 1294
BmgT120I GGNCC 3 cut(s) 292, 542, 1294
BmiI GGNNCC 6 cut(s) 53, 294, 567, 1295, 1296, 1358
BmrFI CCNGG 1 cut(s) 971
BmsI GCATC 4 cut(s) 382, 481, 896, 1256
BpiI GAAGAC 1 cut(s) 933
Bpu10I CCTNAGC 2 cut(s) 237, 1332
BsaHI GRCGYC 1 cut(s) 577
BsaJI CCNNGG 1 cut(s) 970
BsaWI WCCGGW 2 cut(s) 255, 713
Bsc4I CCNNNNNNNGG 6 cut(s) 193, 871, 957, 971, 1168, 1303
Bse1I ACTGG 4 cut(s) 552, 600, 1069, 1195
Bse21I CCTNAGG 2 cut(s) 823, 1299
Bse3DI GCAATG 2 cut(s) 454, 582
BseBI CCWGG 1 cut(s) 971
BseDI CCNNGG 1 cut(s) 970
BseGI GGATG 7 cut(s) 10, 111, 397, 415, 496, 538, 730
BseLI CCNNNNNNNGG 6 cut(s) 193, 871, 957, 971, 1168, 1303
BseMI GCAATG 2 cut(s) 454, 582
BseNI ACTGG 4 cut(s) 552, 600, 1069, 1195
BseRI GAGGAG 1 cut(s) 851
BseSI GKGCMC 2 cut(s) 56, 568
BseXI GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
BseYI CCCAGC 2 cut(s) 187, 561
Bsh1236I CGCG 4 cut(s) 146, 315, 458, 673
BshFI GGCC 5 cut(s) 218, 242, 293, 828, 1194
BshNI GGYRCC 2 cut(s) 51, 565
BsiHKAI GWGCWC 1 cut(s) 306
BsiSI CCGG 3 cut(s) 256, 290, 714
BslFI GGGAC 2 cut(s) 887, 1280
BslI CCNNNNNNNGG 6 cut(s) 193, 871, 957, 971, 1168, 1303
BsmAI GTCTC 1 cut(s) 767
BsmFI GGGAC 2 cut(s) 887, 1280
BsnI GGCC 5 cut(s) 218, 242, 293, 828, 1194
Bsp1286I GDGCHC 4 cut(s) 56, 306, 568, 1229
Bsp143I GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
Bsp68I TCGCGA 2 cut(s) 458, 673
BspACI CCGC 1 cut(s) 1360
BspANI GGCC 5 cut(s) 218, 242, 293, 828, 1194
BspFNI CGCG 4 cut(s) 146, 315, 458, 673
BspLI GGNNCC 6 cut(s) 53, 294, 567, 1295, 1296, 1358
BspPI GGATC 3 cut(s) 19, 1351, 1364
BspQI GCTCTTC 1 cut(s) 311
BspT107I GGYRCC 2 cut(s) 51, 565
BsrDI GCAATG 2 cut(s) 454, 582
BsrI ACTGG 4 cut(s) 552, 600, 1069, 1195
BssECI CCNNGG 1 cut(s) 970
BssMI GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
BssNI GRCGYC 1 cut(s) 577
Bst2UI CCWGG 1 cut(s) 971
Bst4CI ACNGT 4 cut(s) 69, 478, 615, 1243
Bst6I CTCTTC 3 cut(s) 63, 311, 328
BstACI GRCGYC 1 cut(s) 577
BstAPI GCANNNNNTGC 1 cut(s) 154
BstC8I GCNNGC 3 cut(s) 519, 830, 1045
BstF5I GGATG 7 cut(s) 10, 111, 397, 415, 496, 538, 730
BstFNI CGCG 4 cut(s) 146, 315, 458, 673
BstHHI GCGC 1 cut(s) 148
BstKTI GATC 7 cut(s) 14, 125, 671, 761, 881, 1009, 1359
BstMAI GTCTC 1 cut(s) 767
BstMBI GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
BstMWI GCNNNNNNNGC 7 cut(s) 154, 358, 919, 947, 1178, 1253, 1313
BstNI CCWGG 1 cut(s) 971
BstNSI RCATGY 1 cut(s) 1047
BstSCI CCNGG 1 cut(s) 969
BstSFI CTRYAG 1 cut(s) 297
BstSLI GKGCMC 2 cut(s) 56, 568
BstUI CGCG 4 cut(s) 146, 315, 458, 673
BstV1I GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
BstV2I GAAGAC 1 cut(s) 933
BstX2I RGATCY 1 cut(s) 1356
BstXI CCANNNNNNTGG 1 cut(s) 595
BstYI RGATCY 1 cut(s) 1356
Bsu36I CCTNAGG 2 cut(s) 823, 1299
BsuRI GGCC 5 cut(s) 218, 242, 293, 828, 1194
BtgZI GCGATG 1 cut(s) 143
BtsCI GGATG 7 cut(s) 10, 111, 397, 415, 496, 538, 730
BtsIMutI CAGTG 7 cut(s) 559, 888, 914, 1062, 1188, 1248, 1268
BtuMI TCGCGA 2 cut(s) 458, 673
Cac8I GCNNGC 3 cut(s) 519, 830, 1045
CaiI CAGNNNCTG 2 cut(s) 941, 1256
CfoI GCGC 1 cut(s) 148
Cfr13I GGNCC 3 cut(s) 292, 542, 1294
CseI GACGC 1 cut(s) 585
Csp6I GTAC 2 cut(s) 611, 1159
CviAII CATG 7 cut(s) 154, 244, 250, 690, 788, 1044, 1124
CviQI GTAC 2 cut(s) 611, 1159
DpnI GATC 7 cut(s) 13, 124, 670, 760, 880, 1008, 1358
DpnII GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 3 cut(s) 63, 311, 328
EarI CTCTTC 3 cut(s) 63, 311, 328
Ecl136II GAGCTC 1 cut(s) 304
Eco147I AGGCCT 1 cut(s) 218
Eco24I GRGCYC 2 cut(s) 306, 1229
Eco47I GGWCC 2 cut(s) 542, 1294
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 4 cut(s) 59, 183, 360, 627
Eco81I CCTNAGG 2 cut(s) 823, 1299
EcoICRI GAGCTC 1 cut(s) 304
EcoO109I RGGNCCY 1 cut(s) 1294
EcoRI GAATTC 1 cut(s) 85
EcoRII CCWGG 1 cut(s) 969
EcoT38I GRGCYC 2 cut(s) 306, 1229
FaeI CATG 7 cut(s) 157, 247, 253, 693, 791, 1047, 1127
FaqI GGGAC 2 cut(s) 887, 1280
FatI CATG 7 cut(s) 153, 243, 249, 689, 787, 1043, 1123
FblI GTMKAC 1 cut(s) 1059
Fnu4HI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
FokI GGATG 7 cut(s) 17, 98, 404, 422, 503, 545, 737
FriOI GRGCYC 2 cut(s) 306, 1229
Fsp4HI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
FspBI CTAG 4 cut(s) 48, 90, 840, 1203
GlaI GCGC 1 cut(s) 147
GluI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
GsaI CCCAGC 2 cut(s) 191, 565
HaeIII GGCC 5 cut(s) 218, 242, 293, 828, 1194
HapII CCGG 3 cut(s) 256, 290, 714
HgaI GACGC 1 cut(s) 585
HhaI GCGC 1 cut(s) 148
Hin1I GRCGYC 1 cut(s) 577
Hin1II CATG 7 cut(s) 157, 247, 253, 693, 791, 1047, 1127
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HincII GTYRAC 1 cut(s) 1060
HindII GTYRAC 1 cut(s) 1060
HinfI GANTC 7 cut(s) 44, 259, 264, 623, 904, 1275, 1351
HpaII CCGG 3 cut(s) 256, 290, 714
HphI GGTGA 3 cut(s) 891, 1016, 1271
Hpy166II GTNNAC 2 cut(s) 1060, 1121
Hpy188I TCNGA 9 cut(s) 43, 78, 225, 379, 514, 542, 607, 1224, 1356
Hpy8I GTNNAC 2 cut(s) 1060, 1121
HpyAV CCTTC 2 cut(s) 158, 351
HpyCH4III ACNGT 4 cut(s) 69, 478, 615, 1243
HpyCH4IV ACGT 1 cut(s) 524
HpyCH4V TGCA 7 cut(s) 8, 447, 470, 1014, 1043, 1181, 1239
HpyF10VI GCNNNNNNNGC 7 cut(s) 154, 358, 919, 947, 1178, 1253, 1313
HpySE526I ACGT 1 cut(s) 524
Hsp92I GRCGYC 1 cut(s) 577
Hsp92II CATG 7 cut(s) 157, 247, 253, 693, 791, 1047, 1127
HspAI GCGC 1 cut(s) 146
KflI GGGWCCC 1 cut(s) 1294
Kzo9I GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
LguI GCTCTTC 1 cut(s) 311
LmnI GCTCC 3 cut(s) 400, 514, 1321
Lsp1109I GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
LweI GCATC 4 cut(s) 382, 481, 896, 1256
MaeI CTAG 4 cut(s) 48, 90, 840, 1203
MaeII ACGT 1 cut(s) 524
MaeIII GTNAC 1 cut(s) 547
MalI GATC 7 cut(s) 13, 124, 670, 760, 880, 1008, 1358
MboI GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
MboII GAAGA 9 cut(s) 15, 18, 50, 65, 192, 298, 315, 882, 938
MflI RGATCY 1 cut(s) 1356
MhlI GDGCHC 4 cut(s) 56, 306, 568, 1229
MlsI TGGCCA 1 cut(s) 1194
MluCI AATT 6 cut(s) 85, 424, 601, 833, 895, 1176
MluNI TGGCCA 1 cut(s) 1194
MlyI GAGTC 2 cut(s) 253, 898
MmeI TCCRAC 2 cut(s) 411, 520
Mox20I TGGCCA 1 cut(s) 1194
MroXI GAANNNNTTC 1 cut(s) 69
MscI TGGCCA 1 cut(s) 1194
MseI TTAA 2 cut(s) 738, 810
MslI CAYNNNNRTG 3 cut(s) 248, 688, 1038
Msp20I TGGCCA 1 cut(s) 1194
MspA1I CMGCKG 5 cut(s) 561, 643, 938, 1256, 1362
MspI CCGG 3 cut(s) 256, 290, 714
MspR9I CCNGG 1 cut(s) 971
MvaI CCWGG 1 cut(s) 971
MvnI CGCG 4 cut(s) 146, 315, 458, 673
MwoI GCNNNNNNNGC 7 cut(s) 154, 358, 919, 947, 1178, 1253, 1313
NdeII GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
NlaIII CATG 7 cut(s) 157, 247, 253, 693, 791, 1047, 1127
NlaIV GGNNCC 6 cut(s) 53, 294, 567, 1295, 1296, 1358
NruI TCGCGA 2 cut(s) 458, 673
NspI RCATGY 1 cut(s) 1047
OliI CACNNNNGTG 1 cut(s) 1038
PaeI GCATGC 1 cut(s) 1047
PceI AGGCCT 1 cut(s) 218
PciSI GCTCTTC 1 cut(s) 311
PdmI GAANNNNTTC 1 cut(s) 69
PfeI GAWTC 5 cut(s) 44, 264, 623, 1275, 1351
PkrI GCNGC 5 cut(s) 446, 642, 940, 1113, 1255
PleI GAGTC 2 cut(s) 253, 898
PpsI GAGTC 2 cut(s) 253, 898
PpuMI RGGWCCY 1 cut(s) 1294
Psp124BI GAGCTC 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 1294
Psp6I CCWGG 1 cut(s) 969
PspFI CCCAGC 2 cut(s) 187, 561
PspGI CCWGG 1 cut(s) 969
PspN4I GGNNCC 6 cut(s) 53, 294, 567, 1295, 1296, 1358
PspPI GGNCC 3 cut(s) 292, 542, 1294
PspPPI RGGWCCY 1 cut(s) 1294
PstNI CAGNNNCTG 2 cut(s) 941, 1256
PsuI RGATCY 1 cut(s) 1356
PvuII CAGCTG 4 cut(s) 561, 643, 938, 1256
RruI TCGCGA 2 cut(s) 458, 673
RsaI GTAC 2 cut(s) 612, 1160
RsaNI GTAC 2 cut(s) 611, 1159
RseI CAYNNNNRTG 3 cut(s) 248, 688, 1038
SacI GAGCTC 1 cut(s) 306
SalI GTCGAC 1 cut(s) 1058
SapI GCTCTTC 1 cut(s) 311
SaqAI TTAA 2 cut(s) 738, 810
SatI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
Sau3AI GATC 7 cut(s) 11, 122, 668, 758, 878, 1006, 1356
Sau96I GGNCC 3 cut(s) 292, 542, 1294
SchI GAGTC 2 cut(s) 253, 898
ScrFI CCNGG 1 cut(s) 971
SduI GDGCHC 4 cut(s) 56, 306, 568, 1229
SfaNI GCATC 4 cut(s) 382, 481, 896, 1256
SfcI CTRYAG 1 cut(s) 297
SinI GGWCC 2 cut(s) 542, 1294
SmiMI CAYNNNNRTG 3 cut(s) 248, 688, 1038
SphI GCATGC 1 cut(s) 1047
Sse9I AATT 6 cut(s) 85, 424, 601, 833, 895, 1176
SseBI AGGCCT 1 cut(s) 218
SsiI CCGC 1 cut(s) 1360
SspMI CTAG 4 cut(s) 48, 90, 840, 1203
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 218
StyD4I CCNGG 1 cut(s) 969
TaaI ACNGT 4 cut(s) 69, 478, 615, 1243
TaiI ACGT 1 cut(s) 527
TaqI TCGA 4 cut(s) 61, 262, 626, 1059
TasI AATT 6 cut(s) 85, 424, 601, 833, 895, 1176
TatI WGTACW 1 cut(s) 610
TfiI GAWTC 5 cut(s) 44, 264, 623, 1275, 1351
Tru1I TTAA 2 cut(s) 738, 810
Tru9I TTAA 2 cut(s) 738, 810
TscAI CASTG 7 cut(s) 559, 888, 914, 1069, 1195, 1248, 1275
TseI GCWGC 5 cut(s) 444, 640, 938, 1111, 1253
TspDTI ATGAA 8 cut(s) 100, 142, 260, 266, 549, 804, 1116, 1278
TspRI CASTG 7 cut(s) 559, 888, 914, 1069, 1195, 1248, 1275
VpaK11BI GGWCC 2 cut(s) 542, 1294
XapI RAATTY 2 cut(s) 85, 424
XbaI TCTAGA 1 cut(s) 1202
XceI RCATGY 1 cut(s) 1047
XcmI CCANNNNNNNNNTGG 1 cut(s) 587
XmiI GTMKAC 1 cut(s) 1059
XmnI GAANNNNTTC 1 cut(s) 69
XspI CTAG 4 cut(s) 48, 90, 840, 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.