Prupe.1G099100_v2.0.a1

Cell division cycle

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
7917715 .. 7921306
3592 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G099100.3

Sequence Viewer

Length: 1365 bp
ATGGATGCAGGATCAATGAGTTCTTCGTCTAAGTTGAAGTCAGAGTCAAGCTGGCCTCTTCGACAACAACTTCTTCAGGAAAGGAATACTAGGGAAAATCTGGACAGGTTCATCCCCAACAGATCAGCGATGGATTTTGATTTCGCACACTTCATGCTTACTGAAGGTAGGAAAGTTAAGAAAAACCCAGCTATGGTATCTTCCCCATCCAAAGAGGCCTATCGGAAGCAGTTGGCAGAGTCCATGAACATGAACCGGACTCGAATCCTAGCTTTCAAGAACAAGCCTCCGGCCCCTGTAGAGCTCTTCCCACGCGAGTTCTCTTCTTTACCACAGGAAAAACCGGCAAAGCCCCGAAGGCACATTCCTCAAACTTCAGAGAGGACATTGGATGCTCCCGATCTTGTGGATGATTACTACCTAAATTTGTTGGATTGGGGAAGCTGCAATGTTATCACGATAGCTCTTGCAAACACAGTTTATTTGTGGGATGCTACCAATGGTTCTACTTCGGAGGTCACCACATTTGAGGATGAAGTCGGACCTGTTACCAGTGTGAGTTGGGCGCCTGATGGACGCCACATTGCAATTGGACTGGACAATTCTGAAGTACAGTTGTGGGATTCGACTGCTAATAAGCAGCTGAGAACTTTGAGAGGTTGCCACAGATCACGAGTAGGCTCCATTGCATGGAACAATCACATTCTTACAACTGGAGGAATGGATGGCTGTATCGTTAATAATGATGTAAGAGTTAGATCACATATTGTTGAGACATACAGAGGACACGAACAAGAGGTTTGTGGGCTTAAATGGTCAGCCTCAGGCCAGCAATTAGCTAGTGGAGGAAATGATAACCTCCTCCATATATGGGACAGATCAGTGGCGTCTTCAAATTCACCGACTCAGTGGCTTCACAGGCTTGAAGACCATACAGCTGCTGTGAAAGCCCTTGCTTGGTGTCCTTTCCAGGGCAACTTATTAGCTTCTGGTGGAGGTGGGGGTGATCGGTGCATAAAGTTTTGGAACACCCACACAGGTGCATGTCTGAACTCGGTCAACACTGGCTCTCATGTTTGTGCTTTGCTGTGGAACAAGAATGAAAGAGAGCTGCTTAGTTCACATGGATTTACCCAAAATCAGCTTACTCTTTGGAAGTACCCCTCAATGGCTAAAATTACAGAACTCACTGGCCATACTTCTAGAGTTCTTTATATGGCTCAGAGCCCGGATGGTTGCACAGTGGCATCAGCAGCTGGTGATGAAACACTCAGATTCTGGAATGTTTTTGGGGTTCCTGAGGTGGCTAAACCAGCTCCCAAATCTAACCCTGAGCCTTTTGCTCATTTCAATCGTATCCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

50.59

Weight (kDa)

8.32

Isoelectric Point (pI)

52.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 565
AccB7I CCANNNNNTGG 1 cut(s) 690
AccII CGCG 1 cut(s) 315
AciI CCGC 1 cut(s) 1360
AclWI GGATC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 2 cut(s) 424, 895
AcuI CTGAAG 4 cut(s) 59, 183, 360, 627
AcyI GRCGYC 3 cut(s) 566, 577, 887
AfaI GTAC 2 cut(s) 612, 1160
AfiI CCNNNNNNNGG 6 cut(s) 193, 690, 871, 957, 971, 1168
AgsI TTSAA 5 cut(s) 37, 277, 894, 926, 1351
AjnI CCWGG 1 cut(s) 969
AleI CACNNNNGTG 1 cut(s) 1038
Alw21I GWGCWC 1 cut(s) 306
Alw26I GTCTC 1 cut(s) 767
AlwI GGATC 1 cut(s) 19
AlwNI CAGNNNCTG 3 cut(s) 941, 1256, 1278
AoxI GGCC 5 cut(s) 53, 216, 291, 826, 1192
ApeKI GCWGC 5 cut(s) 444, 640, 938, 1111, 1253
ApoI RAATTY 2 cut(s) 424, 895
AspLEI GCGC 1 cut(s) 568
AspS9I GGNCC 2 cut(s) 292, 542
AsuC2I CCSGG 1 cut(s) 1229
AsuHPI GGTGA 4 cut(s) 511, 891, 1016, 1271
AvaII GGWCC 1 cut(s) 542
AxyI CCTNAGG 2 cut(s) 823, 1299
BalI TGGCCA 1 cut(s) 1194
BanI GGYRCC 1 cut(s) 565
BanII GRGCYC 2 cut(s) 306, 1229
BauI CACGAG 1 cut(s) 672
BbsI GAAGAC 2 cut(s) 882, 933
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
BccI CCATC 5 cut(s) 124, 214, 566, 719, 1226
BciT130I CCWGG 1 cut(s) 971
BcnI CCSGG 1 cut(s) 1229
BcoDI GTCTC 1 cut(s) 767
BfaI CTAG 4 cut(s) 90, 269, 840, 1203
BfmI CTRYAG 1 cut(s) 297
BfoI RGCGCY 1 cut(s) 569
BglI GCCNNNNNGGC 1 cut(s) 358
BisI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
BlsI GCNGC 5 cut(s) 446, 642, 940, 1113, 1255
Bme1390I CCNGG 2 cut(s) 971, 1229
Bme18I GGWCC 1 cut(s) 542
BmgT120I GGNCC 2 cut(s) 292, 542
BmiI GGNNCC 4 cut(s) 294, 567, 682, 1296
BmrFI CCNGG 2 cut(s) 971, 1229
BmsI GCATC 3 cut(s) 382, 481, 1256
BpiI GAAGAC 2 cut(s) 882, 933
BpmI CTGGAG 1 cut(s) 735
Bpu10I CCTNAGC 1 cut(s) 1332
BpuMI CCSGG 1 cut(s) 1229
BsaHI GRCGYC 3 cut(s) 566, 577, 887
BsaJI CCNNGG 1 cut(s) 970
BsaWI WCCGGW 1 cut(s) 255
Bsc4I CCNNNNNNNGG 6 cut(s) 193, 690, 871, 957, 971, 1168
Bse118I RCCGGY 1 cut(s) 343
Bse1I ACTGG 5 cut(s) 552, 600, 718, 1069, 1195
Bse21I CCTNAGG 2 cut(s) 823, 1299
Bse3DI GCAATG 3 cut(s) 454, 582, 684
BseBI CCWGG 1 cut(s) 971
BseDI CCNNGG 1 cut(s) 970
BseGI GGATG 9 cut(s) 10, 111, 206, 397, 415, 496, 538, 730, 1237
BseLI CCNNNNNNNGG 6 cut(s) 193, 690, 871, 957, 971, 1168
BseMI GCAATG 3 cut(s) 454, 582, 684
BseMII CTCAG 7 cut(s) 635, 837, 920, 1235, 1285, 1290, 1323
BseNI ACTGG 5 cut(s) 552, 600, 718, 1069, 1195
BseRI GAGGAG 1 cut(s) 851
BseXI GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
BseYI CCCAGC 1 cut(s) 187
Bsh1236I CGCG 1 cut(s) 315
BshFI GGCC 5 cut(s) 55, 218, 293, 828, 1194
BshNI GGYRCC 1 cut(s) 565
BsiHKAI GWGCWC 1 cut(s) 306
BsiSI CCGG 4 cut(s) 256, 290, 344, 1229
BslFI GGGAC 1 cut(s) 887
BslI CCNNNNNNNGG 6 cut(s) 193, 690, 871, 957, 971, 1168
BsmAI GTCTC 1 cut(s) 767
BsmFI GGGAC 1 cut(s) 887
BsnI GGCC 5 cut(s) 55, 218, 293, 828, 1194
Bsp1286I GDGCHC 2 cut(s) 306, 1229
Bsp143I GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
BspACI CCGC 1 cut(s) 1360
BspANI GGCC 5 cut(s) 55, 218, 293, 828, 1194
BspCNI CTCAG 7 cut(s) 636, 836, 919, 1234, 1284, 1291, 1324
BspFNI CGCG 1 cut(s) 315
BspLI GGNNCC 4 cut(s) 294, 567, 682, 1296
BspPI GGATC 1 cut(s) 19
BspQI GCTCTTC 1 cut(s) 311
BspT107I GGYRCC 1 cut(s) 565
BsrDI GCAATG 3 cut(s) 454, 582, 684
BsrFI RCCGGY 1 cut(s) 343
BsrI ACTGG 5 cut(s) 552, 600, 718, 1069, 1195
BssAI RCCGGY 1 cut(s) 343
BssECI CCNNGG 1 cut(s) 970
BssMI GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
BssNI GRCGYC 3 cut(s) 566, 577, 887
BssSI CACGAG 1 cut(s) 672
Bst2BI CACGAG 1 cut(s) 672
Bst2UI CCWGG 1 cut(s) 971
Bst4CI ACNGT 3 cut(s) 478, 615, 1243
Bst6I CTCTTC 3 cut(s) 63, 311, 328
BstACI GRCGYC 3 cut(s) 566, 577, 887
BstC8I GCNNGC 2 cut(s) 53, 830
BstDEI CTNAG 9 cut(s) 30, 644, 823, 906, 1115, 1221, 1271, 1299, 1332
BstEII GGTNACC 1 cut(s) 517
BstF5I GGATG 9 cut(s) 10, 111, 206, 397, 415, 496, 538, 730, 1237
BstFNI CGCG 1 cut(s) 315
BstH2I RGCGCY 1 cut(s) 569
BstHHI GCGC 1 cut(s) 568
BstKTI GATC 7 cut(s) 14, 125, 403, 671, 761, 881, 1009
BstMAI GTCTC 1 cut(s) 767
BstMBI GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
BstMWI GCNNNNNNNGC 5 cut(s) 358, 919, 947, 1253, 1313
BstNI CCWGG 1 cut(s) 971
BstNSI RCATGY 1 cut(s) 1047
BstPI GGTNACC 1 cut(s) 517
BstSCI CCNGG 2 cut(s) 969, 1227
BstSFI CTRYAG 1 cut(s) 297
BstUI CGCG 1 cut(s) 315
BstV1I GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
BstV2I GAAGAC 2 cut(s) 882, 933
Bsu36I CCTNAGG 2 cut(s) 823, 1299
BsuRI GGCC 5 cut(s) 55, 218, 293, 828, 1194
BtgZI GCGATG 1 cut(s) 143
BtsCI GGATG 9 cut(s) 10, 111, 206, 397, 415, 496, 538, 730, 1237
BtsIMutI CAGTG 6 cut(s) 559, 888, 914, 1062, 1188, 1248
Cac8I GCNNGC 2 cut(s) 53, 830
CaiI CAGNNNCTG 3 cut(s) 941, 1256, 1278
CfoI GCGC 1 cut(s) 568
Cfr10I RCCGGY 1 cut(s) 343
Cfr13I GGNCC 2 cut(s) 292, 542
CseI GACGC 2 cut(s) 585, 876
Csp6I GTAC 2 cut(s) 611, 1159
CviAII CATG 7 cut(s) 154, 244, 250, 690, 1044, 1073, 1124
CviQI GTAC 2 cut(s) 611, 1159
DdeI CTNAG 9 cut(s) 30, 644, 823, 906, 1115, 1221, 1271, 1299, 1332
DinI GGCGCC 1 cut(s) 567
DpnI GATC 7 cut(s) 13, 124, 402, 670, 760, 880, 1008
DpnII GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 3 cut(s) 63, 311, 328
EarI CTCTTC 3 cut(s) 63, 311, 328
Ecl136II GAGCTC 1 cut(s) 304
Eco147I AGGCCT 1 cut(s) 218
Eco24I GRGCYC 2 cut(s) 306, 1229
Eco47I GGWCC 1 cut(s) 542
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 4 cut(s) 59, 183, 360, 627
Eco81I CCTNAGG 2 cut(s) 823, 1299
Eco91I GGTNACC 1 cut(s) 517
EcoICRI GAGCTC 1 cut(s) 304
EcoO65I GGTNACC 1 cut(s) 517
EcoRII CCWGG 1 cut(s) 969
EcoT38I GRGCYC 2 cut(s) 306, 1229
EgeI GGCGCC 1 cut(s) 567
EheI GGCGCC 1 cut(s) 567
FaeI CATG 7 cut(s) 157, 247, 253, 693, 1047, 1076, 1127
FaqI GGGAC 1 cut(s) 887
FatI CATG 7 cut(s) 153, 243, 249, 689, 1043, 1072, 1123
Fnu4HI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
FokI GGATG 9 cut(s) 17, 98, 193, 404, 422, 503, 545, 737, 1244
FriOI GRGCYC 2 cut(s) 306, 1229
Fsp4HI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
FspBI CTAG 4 cut(s) 90, 269, 840, 1203
GlaI GCGC 1 cut(s) 567
GluI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
GsaI CCCAGC 1 cut(s) 191
GsuI CTGGAG 1 cut(s) 735
HaeII RGCGCY 1 cut(s) 569
HaeIII GGCC 5 cut(s) 55, 218, 293, 828, 1194
HapII CCGG 4 cut(s) 256, 290, 344, 1229
HgaI GACGC 2 cut(s) 585, 876
HhaI GCGC 1 cut(s) 568
Hin1I GRCGYC 3 cut(s) 566, 577, 887
Hin1II CATG 7 cut(s) 157, 247, 253, 693, 1047, 1076, 1127
Hin6I GCGC 1 cut(s) 566
HinP1I GCGC 1 cut(s) 566
HincII GTYRAC 1 cut(s) 1060
HindII GTYRAC 1 cut(s) 1060
HinfI GANTC 7 cut(s) 44, 239, 259, 264, 623, 904, 1275
HpaII CCGG 4 cut(s) 256, 290, 344, 1229
HphI GGTGA 4 cut(s) 511, 891, 1016, 1271
Hpy166II GTNNAC 2 cut(s) 1060, 1121
Hpy188I TCNGA 9 cut(s) 43, 225, 379, 514, 542, 607, 1050, 1224, 1274
Hpy188III TCNNGA 9 cut(s) 77, 101, 277, 398, 457, 672, 1203, 1279, 1298
Hpy8I GTNNAC 2 cut(s) 1060, 1121
HpyAV CCTTC 2 cut(s) 158, 351
HpyCH4III ACNGT 3 cut(s) 478, 615, 1243
HpyCH4V TGCA 8 cut(s) 8, 447, 470, 587, 689, 1014, 1043, 1239
HpyF10VI GCNNNNNNNGC 5 cut(s) 358, 919, 947, 1253, 1313
HpyF3I CTNAG 9 cut(s) 30, 644, 823, 906, 1115, 1221, 1271, 1299, 1332
Hsp92I GRCGYC 3 cut(s) 566, 577, 887
Hsp92II CATG 7 cut(s) 157, 247, 253, 693, 1047, 1076, 1127
HspAI GCGC 1 cut(s) 566
KasI GGCGCC 1 cut(s) 565
Kzo9I GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
LguI GCTCTTC 1 cut(s) 311
LmnI GCTCC 3 cut(s) 400, 686, 1321
Lsp1109I GCAGC 5 cut(s) 431, 652, 925, 1098, 1265
LweI GCATC 3 cut(s) 382, 481, 1256
MaeI CTAG 4 cut(s) 90, 269, 840, 1203
MaeIII GTNAC 2 cut(s) 517, 547
MalI GATC 7 cut(s) 13, 124, 402, 670, 760, 880, 1008
MboI GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
MboII GAAGA 8 cut(s) 15, 50, 65, 192, 298, 315, 882, 938
MfeI CAATTG 1 cut(s) 588
MhlI GDGCHC 2 cut(s) 306, 1229
MlsI TGGCCA 1 cut(s) 1194
MluCI AATT 6 cut(s) 424, 588, 601, 833, 895, 1176
MluNI TGGCCA 1 cut(s) 1194
Mly113I GGCGCC 1 cut(s) 566
MlyI GAGTC 4 cut(s) 53, 248, 253, 898
MmeI TCCRAC 2 cut(s) 411, 520
Mox20I TGGCCA 1 cut(s) 1194
MscI TGGCCA 1 cut(s) 1194
MseI TTAA 3 cut(s) 177, 738, 810
MslI CAYNNNNRTG 3 cut(s) 248, 1038, 1077
Msp20I TGGCCA 1 cut(s) 1194
MspA1I CMGCKG 4 cut(s) 643, 938, 1256, 1362
MspI CCGG 4 cut(s) 256, 290, 344, 1229
MspR9I CCNGG 2 cut(s) 971, 1229
MunI CAATTG 1 cut(s) 588
MvaI CCWGG 1 cut(s) 971
MvnI CGCG 1 cut(s) 315
MwoI GCNNNNNNNGC 5 cut(s) 358, 919, 947, 1253, 1313
NarI GGCGCC 1 cut(s) 566
NciI CCSGG 1 cut(s) 1229
NdeII GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
NlaIII CATG 7 cut(s) 157, 247, 253, 693, 1047, 1076, 1127
NlaIV GGNNCC 4 cut(s) 294, 567, 682, 1296
NmuCI GTSAC 1 cut(s) 517
NspI RCATGY 1 cut(s) 1047
OliI CACNNNNGTG 1 cut(s) 1038
PceI AGGCCT 1 cut(s) 218
PciSI GCTCTTC 1 cut(s) 311
PfeI GAWTC 3 cut(s) 264, 623, 1275
PflMI CCANNNNNTGG 1 cut(s) 690
PkrI GCNGC 5 cut(s) 446, 642, 940, 1113, 1255
PleI GAGTC 4 cut(s) 52, 247, 253, 898
PluTI GGCGCC 1 cut(s) 569
PpsI GAGTC 4 cut(s) 52, 247, 253, 898
Psp124BI GAGCTC 1 cut(s) 306
Psp6I CCWGG 1 cut(s) 969
PspEI GGTNACC 1 cut(s) 517
PspFI CCCAGC 1 cut(s) 187
PspGI CCWGG 1 cut(s) 969
PspN4I GGNNCC 4 cut(s) 294, 567, 682, 1296
PspPI GGNCC 2 cut(s) 292, 542
PstNI CAGNNNCTG 3 cut(s) 941, 1256, 1278
PvuII CAGCTG 3 cut(s) 643, 938, 1256
RsaI GTAC 2 cut(s) 612, 1160
RsaNI GTAC 2 cut(s) 611, 1159
RseI CAYNNNNRTG 3 cut(s) 248, 1038, 1077
SacI GAGCTC 1 cut(s) 306
SapI GCTCTTC 1 cut(s) 311
SaqAI TTAA 3 cut(s) 177, 738, 810
SatI GCNGC 5 cut(s) 445, 641, 939, 1112, 1254
Sau3AI GATC 7 cut(s) 11, 122, 400, 668, 758, 878, 1006
Sau96I GGNCC 2 cut(s) 292, 542
SchI GAGTC 4 cut(s) 53, 248, 253, 898
ScrFI CCNGG 2 cut(s) 971, 1229
SduI GDGCHC 2 cut(s) 306, 1229
SfaNI GCATC 3 cut(s) 382, 481, 1256
SfcI CTRYAG 1 cut(s) 297
SfoI GGCGCC 1 cut(s) 567
SinI GGWCC 1 cut(s) 542
SmiMI CAYNNNNRTG 3 cut(s) 248, 1038, 1077
Sse9I AATT 6 cut(s) 424, 588, 601, 833, 895, 1176
SseBI AGGCCT 1 cut(s) 218
SsiI CCGC 1 cut(s) 1360
SspDI GGCGCC 1 cut(s) 565
SspMI CTAG 4 cut(s) 90, 269, 840, 1203
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 218
StyD4I CCNGG 2 cut(s) 969, 1227
TaaI ACNGT 3 cut(s) 478, 615, 1243
TaqI TCGA 3 cut(s) 61, 262, 626
TaqII GACCGA 1 cut(s) 1045
TasI AATT 6 cut(s) 424, 588, 601, 833, 895, 1176
TatI WGTACW 1 cut(s) 610
TfiI GAWTC 3 cut(s) 264, 623, 1275
Tru1I TTAA 3 cut(s) 177, 738, 810
Tru9I TTAA 3 cut(s) 177, 738, 810
TscAI CASTG 6 cut(s) 559, 888, 914, 1069, 1195, 1248
TseFI GTSAC 1 cut(s) 517
TseI GCWGC 5 cut(s) 444, 640, 938, 1111, 1253
Tsp45I GTSAC 1 cut(s) 517
TspDTI ATGAA 7 cut(s) 100, 142, 260, 266, 549, 1116, 1278
TspRI CASTG 6 cut(s) 559, 888, 914, 1069, 1195, 1248
Van91I CCANNNNNTGG 1 cut(s) 690
VpaK11BI GGWCC 1 cut(s) 542
XapI RAATTY 2 cut(s) 424, 895
XbaI TCTAGA 1 cut(s) 1202
XceI RCATGY 1 cut(s) 1047
XcmI CCANNNNNNNNNTGG 1 cut(s) 587
XspI CTAG 4 cut(s) 90, 269, 840, 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.